prot_Ecto-sp9_F_contig102.231.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig102.231.1
Unique Nameprot_Ecto-sp9_F_contig102.231.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length276
Homology
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BLAST of mRNA_Ecto-sp9_F_contig102.231.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY0_ECTSI)

HSP 1 Score: 444 bits (1141), Expect = 8.090e-156
Identity = 256/275 (93.09%), Postives = 259/275 (94.18%), Query Frame = 0 
Query:    1 MTRVVLQHHAAXXARLFLRRAAAVNSSHLRPSSPTGASISQQQARTLHYTQCRSLIGSDKASTTSSRDDKDADATAQTAPTTGTPPAAGGIFGNLPARTAAARAGRGCLIALPLAGIGFSAWTCVTDYRRVRHELKLARVGLALAEMSYQRDAGRKGDSGGGGGDANSATRPSFDASPARSFSVALVADAGVLGFHLLAAYGLWHGWDPDPIVNAEIGNLVAAVVSTGGGLRGEYMAANRNAAEALARGGGGTAPXXXXXXXXXXXXXGSHENTV 275
            MTRVVLQHHAAXXARLFLRRAAAVNSSHLRPSSPTGASISQQQARTLHYT+CRSL GSDKASTTSS DDKDADATAQ AP TGTPPAAGGIFGNLPARTAAARAGRGCLIALPLAGIGFSAWTCVTDYRRVRHELKLARVGLALAEMSYQRDAGRKGD G    DANSATRP+FDASPARSFSVALVADAGVLGFHLLAAYGLWHGWDPDPIVNAEIGNLVAAVVSTGGGLRGEY+AANRNAAEALARG      XXXXXXXXXXXXX SHENTV
Sbjct:    1 MTRVVLQHHAAXXARLFLRRAAAVNSSHLRPSSPTGASISQQQARTLHYTRCRSLSGSDKASTTSSSDDKDADATAQRAPNTGTPPAAGGIFGNLPARTAAARAGRGCLIALPLAGIGFSAWTCVTDYRRVRHELKLARVGLALAEMSYQRDAGRKGDGGXXXXDANSATRPTFDASPARSFSVALVADAGVLGFHLLAAYGLWHGWDPDPIVNAEIGNLVAAVVSTGGGLRGEYLAANRNAAEALARGXXXXXXXXXXXXXXXXXXXXSHENTV 275
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BLAST of mRNA_Ecto-sp9_F_contig102.231.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN63_9PHAE)

HSP 1 Score: 400 bits (1029), Expect = 2.210e-138
Identity = 222/264 (84.09%), Postives = 230/264 (87.12%), Query Frame = 0 
Query:    1 MTRVVLQHHAAXXARLFLRRAAAVNSSHLRPSSPTGASISQQQARTLHYTQCRSLIGSDKASTTSSRDDKDADATAQTAPTTGTPPAAGGIFGNLPARTAAARAGRGCLIALPLAGIGFSAWTCVTDYRRVRHELKLARVGLALAEMSYQRDAGRKGDSGGGGGDA--NSATRPSFDASPARSFSVALVADAGVLGFHLLAAYGLWHGWDPDPIVNAEIGNLVAAVVSTGGGLRGEYMAANR---------NAAEALARGGGGT 253
            MTR VLQHHA   AR+FLRRAAA+NSSHLRP S TGASISQQQARTLHYTQCRSL GSDKAST +SRDDKDADATAQTAP TGTPPAAGGIFGNLPARTAAARAGRGCLIALP+ GIGFSAWTCVTDYRRVRHELK A VGLALAEMS+QR+AGRKGDS         NSATRP+ DASP RSFSVALVADAGVLGFHLLAAYGLWHGWDPDPIVNAEIGNLVAAVVSTGGGLRGEY+AANR          AAEALARG GGT
Sbjct:   27 MTRDVLQHHAVAAARVFLRRAAAINSSHLRPPSLTGASISQQQARTLHYTQCRSLSGSDKASTMNSRDDKDADATAQTAPNTGTPPAAGGIFGNLPARTAAARAGRGCLIALPIVGIGFSAWTCVTDYRRVRHELKRACVGLALAEMSFQREAGRKGDSXXXXXXXXXNSATRPTLDASPVRSFSVALVADAGVLGFHLLAAYGLWHGWDPDPIVNAEIGNLVAAVVSTGGGLRGEYLAANRMRQISGRRRTAAEALARGEGGT 290
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig102.231.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized8.090e-15693.09protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized2.210e-13884.09protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig102contigEcto-sp9_F_contig102:50727..51554 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig102.231.1mRNA_Ecto-sp9_F_contig102.231.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig102 49936..51554 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig102.231.1 ID=prot_Ecto-sp9_F_contig102.231.1|Name=mRNA_Ecto-sp9_F_contig102.231.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=276bp
MTRVVLQHHAAAAARLFLRRAAAVNSSHLRPSSPTGASISQQQARTLHYT
QCRSLIGSDKASTTSSRDDKDADATAQTAPTTGTPPAAGGIFGNLPARTA
AARAGRGCLIALPLAGIGFSAWTCVTDYRRVRHELKLARVGLALAEMSYQ
RDAGRKGDSGGGGGDANSATRPSFDASPARSFSVALVADAGVLGFHLLAA
YGLWHGWDPDPIVNAEIGNLVAAVVSTGGGLRGEYMAANRNAAEALARGG
GGTAPSARGDGGGESSGGGSHENTV*
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