prot_Ecto-sp9_F_contig1019.221.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1019.221.1
Unique Nameprot_Ecto-sp9_F_contig1019.221.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length324
Homology
BLAST of mRNA_Ecto-sp9_F_contig1019.221.1 vs.
Match: SF3b1 (domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI14_ECTSI)

HSP 1 Score: 578 bits (1489), Expect = 1.110e-200
Identity = 313/314 (99.68%), Postives = 314/314 (100.00%), Query Frame = 0
Query:    1 ISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKDVKRRWDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGGVTPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQAGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDSMFPPAGRLLATPTPMPMTPGFKMMQTPAREEYGVPATPTESSLPFIKPEDYQ 314
            ISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKDVKRRWDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGGVTPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQAGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLD+MFPPAGRLLATPTPMPMTPGFKMMQTPAREEYGVPATPTESSLPFIKPEDYQ
Sbjct:  155 ISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKDVKRRWDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGGVTPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQAGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDAMFPPAGRLLATPTPMPMTPGFKMMQTPAREEYGVPATPTESSLPFIKPEDYQ 468          
BLAST of mRNA_Ecto-sp9_F_contig1019.221.1 vs.
Match: TOG (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ74_9PHAE)

HSP 1 Score: 533 bits (1372), Expect = 4.990e-176
Identity = 310/394 (78.68%), Postives = 312/394 (79.19%), Query Frame = 0
Query:    1 ISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKDVKRR--------------------------------------------------------------WDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGGVTPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQAGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDSMFPPAG------------------RLLATPTPMPMTPGFKMMQTPAREEYGVPATPTESSLPFIKPEDYQ 314
            ISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKDV  R                                                              WDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGG+TPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQAGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLD+MFPPAG                  RLLATPTPMPMTPGFKMMQTPAREEYGVPATPTESSLPFIKPEDYQ
Sbjct:  155 ISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKDVIMRKAAKQAEEAASLKRSVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGGITPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQAGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDAMFPPAGYRILDAPVGYAPIRTPSRRLLATPTPMPMTPGFKMMQTPAREEYGVPATPTESSLPFIKPEDYQ 548          
BLAST of mRNA_Ecto-sp9_F_contig1019.221.1 vs.
Match: Splicing (factor 3B subunit 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3L3_9STRA)

HSP 1 Score: 157 bits (396), Expect = 5.200e-39
Identity = 144/396 (36.36%), Postives = 177/396 (44.70%), Query Frame = 0
Query:    1 ISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKDV------------------------------------------------KRRWDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGGVTPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQAGVTP---------------GQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPN-LAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDSMFPPAGR------------------LLATPTPMPMTPGFKMMQTPAREEYGVPATPTESSLPFIKPEDYQ 314
            +SP RG DAF+G+TP RS++DIM  Q L ++K+                                                 +RRWD+            + TP +    S WDA+  TP                 GG       SRWDQTP R          +               G  +    G TP+A S+WDD TP+AGG  G             + TP  G TP               G    +   MTP     XXXXXXXX  GM TP+P  +A A    A EPMTPELAQ+MRWERE++ERNRP+TDE+LD++FP AG                   LLATPTPM MTPGFKM +TPAREEYG+ AT +E+ LPFIKPED Q
Sbjct:  137 LSPDRG-DAFSGKTPARSYKDIMINQDLDRQKEELLAAARKKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKRRRWDES-----------EATPVMKPSASGWDAE--TPXXXXXXXXXXXXXXXXAGGK------SRWDQTPVRGDGAAAALGGAXXXXXXXXXXXXXXXGADS----GATPRA-SRWDDATPKAGGAGGV------------EATPGVGATPXXXXXXXXXXXXMVGGVRATSLIGMTPGGAMTXXXXXXXX--GMATPTPGAIAAAQAAAAQEPMTPELAQRMRWEREVEERNRPMTDEELDALFPDAGYKILPAPATYVPIRTPSRLLLATPTPMGMTPGFKMAETPAREEYGIAATQSETGLPFIKPEDMQ 493          
BLAST of mRNA_Ecto-sp9_F_contig1019.221.1 vs.
Match: Hypothetical (protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GVL6_9STRA)

HSP 1 Score: 139 bits (351), Expect = 4.640e-33
Identity = 141/363 (38.84%), Postives = 171/363 (47.11%), Query Frame = 0
Query:    1 ISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKDV-------------------------KRRWDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGGVTPGGVGDTPKAGSKWDDETPRAGG-GFGAGETPSGRKKSRWDQTP--QAGVTPGQTPVAGAM-MTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDSMFPPAG------------------RLLATPTPMP--MTPGFKMMQTPAREEYGVPATPTESSLPFIKPEDYQ 314
            +SP RG D F  +TP  S+ + M  Q L KE+                           KRRWDD  T  A        TP V    SDWD   ATP    RG         +          S+WD TP          R  +RWD+      TP A GV+      TP   S+WD + P  GG G   GETP+ +KKS        Q+  +   TP  GA       XXXXXXXXXXXX      +PN A          M PE+AQQMRWE E+DERNRPL+D +LD+MFP  G                  +LLATPTPM   +TP F+MMQTP+RE Y VP TP++S++PFIKPED Q
Sbjct:   52 LSPGRG-DVFDNKTPMVSYGERMRSQELRKEEAQVRKLIAQKLEDAKNGGEALPVQEMKKRRWDDASTSAA--------TPLVNG--SDWDGADATPA-PHRGLQAHNDSDSS----SSILTSSKWDTTPLVTNGAAKTVR--NRWDE------TPAAAGVSA-----TP---SRWDMQAPSGGGKGVAPGETPTTKKKSXXXXXXXXQSAASVASTPAGGAFGQYVGGXXXXXXXXXXXXXXXXXXTPNAAAF--------MAPEMAQQMRWEAEVDERNRPLSDVELDAMFPATGYKILDPPPSYVPIRTPQRKLLATPTPMGAGVTPAFQMMQTPSRESYAVPLTPSDSAMPFIKPEDQQ 374          
BLAST of mRNA_Ecto-sp9_F_contig1019.221.1 vs.
Match: Uncharacterized (protein AlNc14C26G2567 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W6T1_9STRA)

HSP 1 Score: 139 bits (350), Expect = 6.330e-33
Identity = 125/342 (36.55%), Postives = 161/342 (47.08%), Query Frame = 0
Query:    1 ISPIRGGDAFAGQTPTRSFRDIMAEQALAKEK-DVKRRWDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGGVTPGGVGDTPKAGSK------WDDETPRAGGGFGAGETPSGRKKSRWDQTPQAGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXS--GMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDSMFP------------------PAGRLLATPTPMPMTPGFKMMQTPAREEYGVPATPTESS-LPFIKPEDYQ 314
            +SP R  D F G+TP RS++DIM  Q L  E+ +V R+           +    E  +  + +     +     R  R    G   G            S WD   S  A+++ + R SSRWD      VTP+AGG             SK      WD             ETP    +S+WDQT    +    TP+ G     XXXXXXX          G +TPS  +    L GA   MTPE+AQ++RWERE++ERNRPL DE+LD+MFP                  P+ +L++TPTPM  TPGF M  TPAREEYG+P   T S  +PFIKPEDYQ
Sbjct:  100 LSPERS-DVFDGKTPQRSYKDIMQSQQLEAERAEVIRK-----------IQKQQEEQSANEKLEXXTGNEKVKKRKMRWDDPGSATGSGIDAKTDVESSSGWDTDESSMAEDSNLGR-SSRWD------VTPLAGGQEGSXXXXXXATKSKGEKIGRWD-------------ETPKASSESKWDQTTVTPIANMMTPLGGTSKRSXXXXXXXSSNDIATPQRGQMTPSGAITNDLLTGA---MTPEMAQRLRWEREIEERNRPLADEELDTMFPSTGYKVLDPPASYIPIRTPSRKLMSTPTPMGGTPGFMMQSTPAREEYGIPIPSTPSGDVPFIKPEDYQ 406          
BLAST of mRNA_Ecto-sp9_F_contig1019.221.1 vs.
Match: Sf3b1 (protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812NDD3_SYMMI)

HSP 1 Score: 138 bits (348), Expect = 1.120e-32
Identity = 106/249 (42.57%), Postives = 127/249 (51.00%), Query Frame = 0
Query:  111 ETPVTRRSSRWDQSGGGGVTPMAGG-------VTPGGVGDTPKAGSKWDDETPRAGGGFGAGETP---------------SGRKKSRWDQTPQAGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQA-----GLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDSMFP---------PAG---------RLLATPTPMPMTPGFKMMQTPAREEYGVPATPTESSLPFIKPEDYQ 314
            E PV ++  RWD S G   TP+ G         +    G T  + S+WD  TP   GG  AG                     K S WD TP        TP  G     XXXXXX         GM TP+   A        L GA   MTPE+AQ+MRWE E++ERNRPLTD++LD+MFP         PAG         +L+ATPTPM  TPGF + QTPARE YGVPATP+ES++PF+KPEDYQ
Sbjct:   24 EPPVEKKRRRWDDSAGN-ATPLVGSDWDKVDTTSTSAAGSTNSSSSRWD-VTPVGTGGGAAGRVXXXXXXXXXXXXXXXXGSGKVSSWDATPSGADMTDATP-GGTKKRXXXXXXXDARGGMTPGGMSTPAGGAAMGMQTPMALMGA---MTPEMAQRMRWEAEIEERNRPLTDDELDAMFPATGFKILDPPAGYVPIRTPKRKLMATPTPMGQTPGFSIQQTPARESYGVPATPSESAMPFVKPEDYQ 266          
BLAST of mRNA_Ecto-sp9_F_contig1019.221.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R6C6_9STRA)

HSP 1 Score: 138 bits (348), Expect = 1.190e-32
Identity = 88/176 (50.00%), Postives = 106/176 (60.23%), Query Frame = 0
Query:  158 AGGGFGA--GETPSGRKKSRWDQTPQAGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDSMFPPAG------------------RLLATPTPMPMTPGFKMMQTPAREEYGVPATPTESSLPFIKPEDY 313
            AGGG     G TP+GRK+SRWD+TP AG     TP A    TP XXX           G +TP       G+     PMTPE+AQ++RWERE++ERNR +TDE+LD+MFPP G                  +L+ATPTP+  TPGF M  TPARE+YGVPAT  E+ LPFIKPEDY
Sbjct:  340 AGGGEAETPGATPAGRKRSRWDETPVAGAA---TPAA----TPGXXXLGAAGAAGMGLGGMTP-------GMVDPSVPMTPEMAQRLRWEREIEERNRYMTDEELDAMFPPTGYKILDPPPGYQPITTPSRKLMATPTPLGSTPGFTMAATPAREDYGVPATAGETGLPFIKPEDY 501          
BLAST of mRNA_Ecto-sp9_F_contig1019.221.1 vs.
Match: SF3b1 (domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G627_9STRA)

HSP 1 Score: 129 bits (325), Expect = 1.270e-29
Identity = 126/352 (35.80%), Postives = 162/352 (46.02%), Query Frame = 0
Query:    1 ISPIRGGDAFAGQTPTRSFRDIMAEQALAKEK-----DVKRRWDDGGTPVAGGVAD---GDETPAVGKIVSDWD---------ADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGGVTPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKKSRWDQTPQAGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXS--GMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDSMFP------------------PAGRLLATPTPMPMTPGFKMMQTPAREEYGVPATPTESS-LPFIKPEDYQ 314
            +SP R  D F G+TP RS++DIM  Q L  E+      ++++ D+    +A G  +   G+E   V K    WD          D  T V SS G                      WD T      E P + RSSRWD      +TP+AGG    G        SK   E            TP   K  +   TP   +    TP+AG     XXXXX            G +TPS  ++   L GA   MTPE+AQ++RWERE++ERNRPL +E+LD+MFP                  P+ +L+ TPTPM  TPGF M  TPARE+YG+P   T S  +PFIKPEDYQ
Sbjct:  100 LSPERS-DVFDGKTPQRSYKDIMQSQQLEAERAEVIRKIQKQQDE---EIANGKLEKPAGNEKEKVKKRKMRWDDPGSGSGSGIDAKTDVESSSG----------------------WD-TDESSMAEDPNSGRSSRWD------ITPVAGGQE--GXXXXXXXASKNLREKSGXXXXXXXXXTPGQSKXXQTTVTPTPNL---MTPLAGTSKXXXXXXXPIASNDVATPQRGQMTPSGVISNDLLTGA---MTPEMAQRLRWEREIEERNRPLAEEELDAMFPNTGYKILDPPASYIPIRTPSRKLMTTPTPMGGTPGFMMQSTPAREDYGIPIPSTPSGDVPFIKPEDYQ 410          
BLAST of mRNA_Ecto-sp9_F_contig1019.221.1 vs.
Match: TOG (domain-containing protein n=1 Tax=Phycisphaeraceae bacterium TMED231 TaxID=1986831 RepID=A0A1Z9QC94_9BACT)

HSP 1 Score: 129 bits (323), Expect = 2.340e-29
Identity = 84/182 (46.15%), Postives = 97/182 (53.30%), Query Frame = 0
Query:  151 WDDETPRAGGGFGAGETPSGRKKSRWDQTPQAGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDERNRPLTDEDLDSMFP---------PAG---------RLLATPTPMPMTPGFKMMQTPAREEYGVPATPTESSLPFIKPEDYQ 314
            WDD TP   G   AG       + R          PG         TP              S M TPSP+   AG      PMTPELAQ+MRWERE++ERN PL+DE+LD+MFP         PAG         +LLATPTPM  TPGF +  TPARE+Y VPATP E++LPFIKPEDYQ
Sbjct:  284 WDDATPDTXGAAAAG-------RKRXXXXXXXVTAPGGAXXXXXXXTPVGL-----------SDMPTPSPSSLAAG------PMTPELAQRMRWEREIEERNHPLSDEELDAMFPESGYKILEPPAGYVPIRTPSRKLLATPTPMGGTPGFSIQSTPAREDYAVPATPNETNLPFIKPEDYQ 441          
BLAST of mRNA_Ecto-sp9_F_contig1019.221.1 vs.
Match: Splicing (factor 3B subunit 1 (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X7D7_9STRA)

HSP 1 Score: 127 bits (319), Expect = 3.360e-29
Identity = 134/350 (38.29%), Postives = 162/350 (46.29%), Query Frame = 0
Query:    7 GDAFAGQTPTRSFRDIMAEQALAKEKDVKRRWDDGGTPVAGGVADGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGXXXXXXXSRWDQTPSRDAQETPVT--RRSSRWDQSGGGGVTPMAGGVTPGGVGDTPKAGSKWDDETPRAGGGFGAGETPSGRKK------------SRWDQTPQ--AGVTPGQTPVAGAMMTPXXXXXXXXXXXXXXSGMVTPSPNLAQAGLGGAGEPM----TPELAQQMRWERELDERNRPLTDEDLDSMFP------------------PAGRLLATPTPMPMTPGFKMMQTPAREEYGVP-ATPTES---SLPFIKPEDYQ 314
            GDAF  +TP RS+++IM  Q L +E+            V   +    E               ATP R  +                      RWD       QE P T     S WD +    V+ +A          TP  GS   D TP AG   GA  TP GRK             S+WD TP    G TP  T           XXXXXXXXXXXXS M TP  NL     G   + M    TPELAQ++RWERE+++RNRP+TDE+LD++FP                  P+ +LLATPTPM  TPGF M  TPARE+YGVP ATP+ S   ++PFIKPEDYQ
Sbjct:  115 GDAFGDKTPARSYKEIMQTQQLEQER----------AEVVRKIQQKREXXXXXXXXXXXXDVDATPKRRRKRM--------------------RWD-------QEGPTTDGETQSEWDTASESSVSSVAA---------TPTRGSSRWDATPVAGSTVGA--TP-GRKNXXXXXXXASSGTSKWDATPVNLGGATPVGT-----------XXXXXXXXXXXXSDMATPGKNLQMTPGGSMTDIMSGALTPELAQRLRWEREIEDRNRPMTDEELDALFPATGYKILDPPASYVPIRTPSRKLLATPTPMGQTPGFAMQATPAREDYGVPVATPSGSDGSAMPFIKPEDYQ 404          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1019.221.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
SF3b11.110e-20099.68domain-containing protein (Fragment) n=1 Tax=Ectoc... [more]
TOG4.990e-17678.68domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Splicing5.200e-3936.36factor 3B subunit 1 n=1 Tax=Tribonema minus TaxID=... [more]
Hypothetical4.640e-3338.84protein n=2 Tax=Spumella elongata TaxID=89044 RepI... [more]
Uncharacterized6.330e-3336.55protein AlNc14C26G2567 n=1 Tax=Albugo laibachii Nc... [more]
Sf3b11.120e-3242.57protein n=1 Tax=Symbiodinium microadriaticum TaxID... [more]
Hypothetical1.190e-3250.00protein n=1 Tax=Rhizochromulina marina TaxID=10348... [more]
SF3b11.270e-2935.80domain-containing protein n=1 Tax=Albugo candida T... [more]
TOG2.340e-2946.15domain-containing protein n=1 Tax=Phycisphaeraceae... [more]
Splicing3.360e-2938.29factor 3B subunit 1 (Fragment) n=1 Tax=Phytophthor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015016Splicing factor 3B subunit 1PFAMPF08920SF3b1coord: 171..302
e-value: 8.8E-19
score: 68.2
IPR038737Splicing factor 3B subunit 1-likePANTHERPTHR12097SPLICING FACTOR 3B, SUBUNIT 1-RELATEDcoord: 8..315

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1019contigEcto-sp9_F_contig1019:24649..27085 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1019.221.1mRNA_Ecto-sp9_F_contig1019.221.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1019 24649..27085 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1019.221.1 ID=prot_Ecto-sp9_F_contig1019.221.1|Name=mRNA_Ecto-sp9_F_contig1019.221.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=324bp
ISPIRGGDAFAGQTPTRSFRDIMAEQALAKEKDVKRRWDDGGTPVAGGVA
DGDETPAVGKIVSDWDADVATPVRSSRGFGGGETPGRTPGGGGETPGRSR
WDQTPSRDAQETPVTRRSSRWDQSGGGGVTPMAGGVTPGGVGDTPKAGSK
WDDETPRAGGGFGAGETPSGRKKSRWDQTPQAGVTPGQTPVAGAMMTPGA
TPSAGWTPGQTPSGMVTPSPNLAQAGLGGAGEPMTPELAQQMRWERELDE
RNRPLTDEDLDSMFPPAGRLLATPTPMPMTPGFKMMQTPAREEYGVPATP
TESSLPFIKPEDYQVRRIISCRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015016SF3b_su1
IPR038737SF3b_su1-like