prot_Ecto-sp9_F_contig10166.200.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10166.200.1
Unique Nameprot_Ecto-sp9_F_contig10166.200.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length82
Homology
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BLAST of mRNA_Ecto-sp9_F_contig10166.200.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD61_ECTSI)

HSP 1 Score: 149 bits (377), Expect = 3.690e-40
Identity = 78/81 (96.30%), Postives = 79/81 (97.53%), Query Frame = 0 
Query:    1 MLRMLDVQAEAMRLNADVQSDFVMFIQAFMDRGAFPAWELESILRISTAVLAVMGVQRALLALGHAVATVVDRESYGSYYR 81
            MLRMLDVQA+AMRLNADVQSDFVMFIQAFMDRGAFP WELESILRISTAVLAVMGVQRALL LGHAVATVVDRESYGSYYR
Sbjct: 1146 MLRMLDVQADAMRLNADVQSDFVMFIQAFMDRGAFPVWELESILRISTAVLAVMGVQRALLTLGHAVATVVDRESYGSYYR 1226
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BLAST of mRNA_Ecto-sp9_F_contig10166.200.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0H2_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 4.950e-37
Identity = 73/80 (91.25%), Postives = 75/80 (93.75%), Query Frame = 0 
Query:    2 LRMLDVQAEAMRLNADVQSDFVMFIQAFMDRGAFPAWELESILRISTAVLAVMGVQRALLALGHAVATVVDRESYGSYYR 81
            LRMLDVQA+AMRLNADVQSDFVMFIQAFMDRGAFP WELESILRI+TAVLAVMGVQRALL LGHAVATVVD E YGSY R
Sbjct:  477 LRMLDVQADAMRLNADVQSDFVMFIQAFMDRGAFPVWELESILRINTAVLAVMGVQRALLTLGHAVATVVDHEFYGSYSR 556
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BLAST of mRNA_Ecto-sp9_F_contig10166.200.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDY4_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 2.620e-7
Identity = 34/78 (43.59%), Postives = 47/78 (60.26%), Query Frame = 0 
Query:    3 RMLDVQAEAMRLNADVQSDFVMFIQAFMDRGAFPAWELESILRISTAVLAVMGVQRALLALGHAVATVVDRESYGSYY 80
            R+L +QAE  RLN  + SD V ++       A P+  L   LR +T   +VM +QR LLALGHAV  +++RE+Y  YY
Sbjct: 1148 RLLQLQAETRRLNQAIDSDMVAYMLRHRVTAARPS--LFFALRFTTTTFSVMRLQRGLLALGHAVTDLLERENYIFYY 1223
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10166.200.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
Uncharacterized3.690e-4096.30protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized4.950e-3791.25protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.620e-743.59protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10166contigEcto-sp9_F_contig10166:1077..1774 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10166.200.1mRNA_Ecto-sp9_F_contig10166.200.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10166 1059..2067 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10166.200.1 ID=prot_Ecto-sp9_F_contig10166.200.1|Name=mRNA_Ecto-sp9_F_contig10166.200.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=82bp
MLRMLDVQAEAMRLNADVQSDFVMFIQAFMDRGAFPAWELESILRISTAV
LAVMGVQRALLALGHAVATVVDRESYGSYYR*
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