prot_Ecto-sp9_F_contig10139.175.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp9_F_contig10139.175.1
Unique Name	prot_Ecto-sp9_F_contig10139.175.1
Type	polypeptide
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length	103

Homology

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BLAST of mRNA_Ecto-sp9_F_contig10139.175.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS0_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 1.820e-30
Identity = 88/93 (94.62%), Postives = 88/93 (94.62%), Query Frame = 0

Query:    1 MVGRRTLGTQLTGVILPVISSDESPVAPTLDESMGEVGGGGEKEDEXXXXXXXXXXXXXXXXXXXXXXXXXEAQYVSSRGRVRIAKKRFPEVG 93
            MVGRRTLGTQLTGVILPVISSDESPVAPTLDESMGEVGGGGEKEDEXXXXXXXXXXXXXXXXXXXXX    EAQYVSSRGRV IAKKRFPEVG
Sbjct:  144 MVGRRTLGTQLTGVILPVISSDESPVAPTLDESMGEVGGGGEKEDEXXXXXXXXXXXXXXXXXXXXXRE--EAQYVSSRGRVSIAKKRFPEVG 234

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BLAST of mRNA_Ecto-sp9_F_contig10139.175.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L780_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 2.140e-28
Identity = 88/93 (94.62%), Postives = 88/93 (94.62%), Query Frame = 0

Query:    1 MVGRRTLGTQLTGVILPVISSDESPVAPTLDESMGEVGGGGEKEDEXXXXXXXXXXXXXXXXXXXXXXXXXEAQYVSSRGRVRIAKKRFPEVG 93
            MVGRRTLGTQLTGVILPVISSDESPVAPTLDESMGEVGGGGEKEDEXXXXXXXXXXXXXXXXXXXXX    EAQYVSSRGRV IAKKRFPEVG
Sbjct:  533 MVGRRTLGTQLTGVILPVISSDESPVAPTLDESMGEVGGGGEKEDEXXXXXXXXXXXXXXXXXXXXXRE--EAQYVSSRGRVSIAKKRFPEVG 623

[Close]

BLAST of mRNA_Ecto-sp9_F_contig10139.175.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K188_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 2.400e-28
Identity = 87/93 (93.55%), Postives = 87/93 (93.55%), Query Frame = 0

Query:    1 MVGRRTLGTQLTGVILPVISSDESPVAPTLDESMGEVGGGGEKEDEXXXXXXXXXXXXXXXXXXXXXXXXXEAQYVSSRGRVRIAKKRFPEVG 93
            MVGRRT GTQLTGVILPVISSDESPVAPTLDESMGEVGGGGEKEDEXXXXXXXXXXXXXXXXXXXXX    EAQYVSSRGRV IAKKRFPEVG
Sbjct:  269 MVGRRTPGTQLTGVILPVISSDESPVAPTLDESMGEVGGGGEKEDEXXXXXXXXXXXXXXXXXXXXXRE--EAQYVSSRGRVSIAKKRFPEVG 359

[Close]

BLAST of mRNA_Ecto-sp9_F_contig10139.175.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJY4_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 7.200e-22
Identity = 76/93 (81.72%), Postives = 78/93 (83.87%), Query Frame = 0

Query:    1 MVGRRTLGTQLTGVILPVISSDESPVAPTLDESMGEVGGGGEKEDEXXXXXXXXXXXXXXXXXXXXXXXXXEAQYVSSRGRVRIAKKRFPEVG 93
            MVGRRTLGTQLTGVILPVISSDESPVAPTLD+SMGE             XXXXXXXXXXXXXXXXXXXXXX AQY+ SRGRVRIAKKRFPEVG
Sbjct:   21 MVGRRTLGTQLTGVILPVISSDESPVAPTLDQSMGE------------GXXXXXXXXXXXXXXXXXXXXXXXAQYIRSRGRVRIAKKRFPEVG 101

[Close]

BLAST of mRNA_Ecto-sp9_F_contig10139.175.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5G2_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 3.120e-21
Identity = 68/93 (73.12%), Postives = 69/93 (74.19%), Query Frame = 0

Query:    1 MVGRRTLGTQLTGVILPVISSDESPVAPTLDESMGEVGGGGEKEDEXXXXXXXXXXXXXXXXXXXXXXXXXEAQYVSSRGRVRIAKKRFPEVG 93
            MVGRRTLGTQLTGVILPVISSDESPVAPTLDESMGE       E+EXXXXXXXXX                EAQYVSSRGRV IAKKRFPEVG
Sbjct:  327 MVGRRTLGTQLTGVILPVISSDESPVAPTLDESMGE-------EEEXXXXXXXXXE---------------EAQYVSSRGRVSIAKKRFPEVG 397

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BLAST of mRNA_Ecto-sp9_F_contig10139.175.1 vs.
Match: Reverse (transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDU4_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 6.730e-21
Identity = 78/85 (91.76%), Postives = 79/85 (92.94%), Query Frame = 0

Query:    2 VGRRTLGTQLTGVILPVISSDESPVAPTLDESMGEVGGGGEKEDEXXXXXXXXXXXXXXXXXXXXXXXXXEAQYVSSRGRVRIAK 86
            VGRRTLGTQLTGVILPVISSDESPVAPTLDESMGEVGGGGEKEDEXXXXXXXXXXXXXXXXXXXXX    EAQYVSSRGRV  A+
Sbjct:   22 VGRRTLGTQLTGVILPVISSDESPVAPTLDESMGEVGGGGEKEDEXXXXXXXXXXXXXXXXXXXXXRE--EAQYVSSRGRVDRAR 104

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BLAST of mRNA_Ecto-sp9_F_contig10139.175.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7E6_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 6.790e-21
Identity = 68/93 (73.12%), Postives = 69/93 (74.19%), Query Frame = 0

Query:    1 MVGRRTLGTQLTGVILPVISSDESPVAPTLDESMGEVGGGGEKEDEXXXXXXXXXXXXXXXXXXXXXXXXXEAQYVSSRGRVRIAKKRFPEVG 93
            MVGRRTLGTQLTGVILPVISSDESPVAPTLDESMGE       E+EXXXXXXXXX                EAQYVSSRGRV IAKKRFPEVG
Sbjct:  889 MVGRRTLGTQLTGVILPVISSDESPVAPTLDESMGE-------EEEXXXXXXXXXE---------------EAQYVSSRGRVSIAKKRFPEVG 959

[Close]

BLAST of mRNA_Ecto-sp9_F_contig10139.175.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF91_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 1.100e-18
Identity = 63/92 (68.48%), Postives = 67/92 (72.83%), Query Frame = 0

Query:    2 VGRRTLGTQLTGVILPVISSDESPVAPTLDESMGEVGGGGEKEDEXXXXXXXXXXXXXXXXXXXXXXXXXEAQYVSSRGRVRIAKKRFPEVG 93
            VGRRTLGTQLTGVILPVISSDESPVAPTLDE+M        +E+EXXXXXXXXXXX              EAQY SSRG V IAK+RFPEVG
Sbjct:    9 VGRRTLGTQLTGVILPVISSDESPVAPTLDETM--------REEEXXXXXXXXXXXRE------------EAQYESSRGCVGIAKRRFPEVG 80

[Close]

BLAST of mRNA_Ecto-sp9_F_contig10139.175.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6J8_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 1.790e-18
Identity = 54/82 (65.85%), Postives = 54/82 (65.85%), Query Frame = 0

Query:    1 MVGRRTLGTQLTGVILPVISSDESPVAPTLDESMGEVGGGGEKEDEXXXXXXXXXXXXXXXXXXXXXXXXXEAQYVSSRGRV 82
            MVGRRT G QLTGVIL VISSDESPVAPTLDESMGEVGGGGEKEDE                         EAQYVSSRGRV
Sbjct:   21 MVGRRTRGAQLTGVILLVISSDESPVAPTLDESMGEVGGGGEKEDEGEELGERE-----------------EAQYVSSRGRV 85

[Close]

BLAST of mRNA_Ecto-sp9_F_contig10139.175.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMY8_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 1.290e-13
Identity = 78/118 (66.10%), Postives = 84/118 (71.19%), Query Frame = 0

Query:    2 VGRRTLGTQLTGVILPVISSDESPVAPT--------LDESMGEVG------GGGEKEDEXXXXXXXXXXXXXXXXXXXXXXXXXEA------------QYVSSRGRVRIAKKRFPEVG 93
            VGRRTLGTQLTGVILPV+SSDESPVAPT        LDESMGE G      GG E ++EXXXXXXXXXXXXXXXXXXXXXXXXX               YVSSRGRVRIAK++F  +G
Sbjct:   18 VGRRTLGTQLTGVILPVMSSDESPVAPTPDPIPSPTLDESMGEGGAGWEEDGGEEMKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESYVSSRGRVRIAKRKFRALG 135

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig10139.175.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig10139.175.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 15


Match Name	E-value	Identity	Description
Uncharacterized	1.820e-30	94.62	protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=...	[more]
Uncharacterized	2.140e-28	94.62	protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=...	[more]
Uncharacterized	2.400e-28	93.55	protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=...	[more]
Uncharacterized	7.200e-22	81.72	protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=...	[more]
Uncharacterized	3.120e-21	73.12	protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=...	[more]
Reverse	6.730e-21	91.76	transcriptase domain-containing protein (Fragment)...	[more]
Uncharacterized	6.790e-21	73.12	protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=...	[more]
Uncharacterized	1.100e-18	68.48	protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=...	[more]
Uncharacterized	1.790e-18	65.85	protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=...	[more]
Uncharacterized	1.290e-13	66.10	protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 47..74
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 6..16
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 22..102
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..5
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..21
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 17..21

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig10139	contig	Ecto-sp9_F_contig10139:407..715 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig10139.175.1	mRNA_Ecto-sp9_F_contig10139.175.1	Ectocarpus species9 EcSCA_722f female	mRNA	Ecto-sp9_F_contig10139 407..715 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp9_F_contig10139.175.1 ID=prot_Ecto-sp9_F_contig10139.175.1|Name=mRNA_Ecto-sp9_F_contig10139.175.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=103bp
MVGRRTLGTQLTGVILPVISSDESPVAPTLDESMGEVGGGGEKEDEGEEE
DEEGEEDEEEEEEVEEEGEREEAQYVSSRGRVRIAKKRFPEVGLGMDGCV
GC*