prot_Ecto-sp9_F_contig1012.162.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1012.162.1
Unique Nameprot_Ecto-sp9_F_contig1012.162.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length108
Homology
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BLAST of mRNA_Ecto-sp9_F_contig1012.162.1 vs.
Match: DUF547 (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMK0_ECTSI)

HSP 1 Score: 127 bits (320), Expect = 5.320e-32
Identity = 67/70 (95.71%), Postives = 67/70 (95.71%), Query Frame = 0 
Query:    1 AGSADGEPGSTVVVIDVPDGGGADIGDEIALPLLTDRDPSPRGRQMSASRWASNDDASDGEMEDRRARRE 70
            AGSAD EPGSTV VIDVPDGG ADIGDEIALPLLTDRDPSPRGRQMSASRWASNDDASDGEMEDRRARRE
Sbjct:  783 AGSADWEPGSTVAVIDVPDGGDADIGDEIALPLLTDRDPSPRGRQMSASRWASNDDASDGEMEDRRARRE 852
[Close]
BLAST of mRNA_Ecto-sp9_F_contig1012.162.1 vs.
Match: DUF547 (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCR6_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 2.170e-25
Identity = 60/64 (93.75%), Postives = 61/64 (95.31%), Query Frame = 0 
Query:    7 EPGSTVVVIDVPDGGGADIGDEIALPLLTDRDPSPRGRQMSASRWASNDDASDGEMEDRRARRE 70
            EPGST V IDVPDGG ADIGDEIALPLLTDRDPSPRGRQMSA+RWASNDDASDGEMEDRRARRE
Sbjct:  680 EPGSTGV-IDVPDGG-ADIGDEIALPLLTDRDPSPRGRQMSATRWASNDDASDGEMEDRRARRE 741
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1012.162.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
DUF5475.320e-3295.71domain-containing protein n=1 Tax=Ectocarpus silic... [more]
DUF5472.170e-2593.75domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1012contigEcto-sp9_F_contig1012:25115..25438 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1012.162.1mRNA_Ecto-sp9_F_contig1012.162.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1012 25115..25439 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1012.162.1 ID=prot_Ecto-sp9_F_contig1012.162.1|Name=mRNA_Ecto-sp9_F_contig1012.162.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=108bp
AGSADGEPGSTVVVIDVPDGGGADIGDEIALPLLTDRDPSPRGRQMSASR
WASNDDASDGEMEDRRARRERRRELKGAGAAGAGAGAGAGAGAGAGAASS
AAGVDRAR
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