prot_Ecto-sp9_F_contig1010.136.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1010.136.1
Unique Nameprot_Ecto-sp9_F_contig1010.136.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length192
Homology
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BLAST of mRNA_Ecto-sp9_F_contig1010.136.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7D8_ECTSI)

HSP 1 Score: 377 bits (969), Expect = 6.260e-130
Identity = 179/193 (92.75%), Postives = 186/193 (96.37%), Query Frame = 0 
Query:    1 MPPTRPLSTPCRYGYNCTRPDCFYAHPKDMNKDRPKDERPLCTFGSGXXXXXXHNDHPNGRIMDQLRASIDYCSSWMLVRPHELVRVSAAFQAAFPAPNDGKDRCDFVAAVPVRVAYNDWKRYRGISATGTPDGVPRNPQQIQLYPRTRRGERLLQDAQNRVGLRWSPTPYRPWKTLERMATHDQ---AREDH 190
            MPPTRPLSTPCRYGYNCTRPDCFYAHPKDM+KDRPKDERPLCTFGSGXXXXXXHNDHPNGRIMDQLRASIDYCSSWMLVRPHELVRVSAAFQAAFPAPNDGKDRCDFVAAVPVR+AYNDW+RYRGIS TGTPDGVP NPQQIQLYPRTR+GERLLQD QNRVG+RWSPTPYRPWKTLERMATHDQ   + +DH
Sbjct:    1 MPPTRPLSTPCRYGYNCTRPDCFYAHPKDMHKDRPKDERPLCTFGSGXXXXXXHNDHPNGRIMDQLRASIDYCSSWMLVRPHELVRVSAAFQAAFPAPNDGKDRCDFVAAVPVRLAYNDWQRYRGISTTGTPDGVPSNPQQIQLYPRTRKGERLLQDPQNRVGMRWSPTPYRPWKTLERMATHDQYWESNQDH 193
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1010.136.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Uncharacterized6.260e-13092.75protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14608zf-CCCH_2coord: 10..27
e-value: 4.7E-4
score: 20.5
coord: 42..58
e-value: 0.12
score: 12.9
NoneNo IPR availableGENE3D1.20.58.1670coord: 4..71
e-value: 3.9E-10
score: 41.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1010contigEcto-sp9_F_contig1010:8850..11866 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1010.136.1mRNA_Ecto-sp9_F_contig1010.136.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1010 8850..14864 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1010.136.1 ID=prot_Ecto-sp9_F_contig1010.136.1|Name=mRNA_Ecto-sp9_F_contig1010.136.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=192bp
MPPTRPLSTPCRYGYNCTRPDCFYAHPKDMNKDRPKDERPLCTFGSGCFR
KVCHNDHPNGRIMDQLRASIDYCSSWMLVRPHELVRVSAAFQAAFPAPND
GKDRCDFVAAVPVRVAYNDWKRYRGISATGTPDGVPRNPQQIQLYPRTRR
GERLLQDAQNRVGLRWSPTPYRPWKTLERMATHDQAREDHG*
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