prot_Ecto-sp9_F_contig1010.135.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1010.135.1
Unique Nameprot_Ecto-sp9_F_contig1010.135.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length317
Homology
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BLAST of mRNA_Ecto-sp9_F_contig1010.135.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7D8_ECTSI)

HSP 1 Score: 242 bits (617), Expect = 1.420e-74
Identity = 156/316 (49.37%), Postives = 160/316 (50.63%), Query Frame = 0 
Query:    1 HWESNQNHYLLCAGYEAFPPGSGVYIELSVTDMMKVEDAGDGQRAGARVAREVLGLPGANGQKWFVFHVSRPDEAHEEAFNITIRAIVDTSKMPAIPRRPEPSRAPQLAQPPVPXXXXXTVRPGAVPAXXAPFNAHQXXXXXXXXXXQPFAAPANFAGPSPPXXXXXXXXXXXXXXXXXSNSPAEGQKQLPGSVSFNRGGPAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNTVDELSDLLSSLNMAKFRSAFDRQNVDLKALKMMTAESELSGIAIPLGPRIKLMKELGIARGR 316
            +WESNQ+HYLLCAGYEAFPPGSGVYIELSVTDMMK EDAGDGQRAGARVAREVLGLPGANGQKWFVFHVSRPDEAHEEAFNITIRAIVDTSKMP +PR  EP RAPQLAQPPV                                             P PP                                                                                          +TV               RSAFDRQNVDLKALKMMTAESELSGIAIPLGPRIKLMKELGIARGR
Sbjct:  186 YWESNQDHYLLCAGYEAFPPGSGVYIELSVTDMMKAEDAGDGQRAGARVAREVLGLPGANGQKWFVFHVSRPDEAHEEAFNITIRAIVDTSKMPGVPRPHEPGRAPQLAQPPV--------------------------------------------LPPPP------------------------------------------------------------------------------------------STV---------------RSAFDRQNVDLKALKMMTAESELSGIAIPLGPRIKLMKELGIARGR 352
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BLAST of mRNA_Ecto-sp9_F_contig1010.135.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K610_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 1.990e-22
Identity = 148/182 (81.32%), Postives = 152/182 (83.52%), Query Frame = 0 
Query:   93 MPAIPRRPEPSRAPQLAQPPVPXXXXX---TVRPGAVPAXXAPFNAHQXXXXXXXXXXQPFAAPANFAGPSPPXXXXXXXXXXXXXXXXXSNSPAEGQKQLPGSVSFNRGGPAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNTVDELSDLLSSLNMAKFR 271
            MPA+PRRPEPSRAPQL QPP+ XXXXX   T RPGAVPA  A FNAHQ XXXXXXXXX       NFAG SPP XXXXXXXXXXXXXXXX    AEGQ+QLPGSVSFN GGPA  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    +NTVDELSDLLSSLNMAKFR
Sbjct:    1 MPAVPRRPEPSRAPQLVQPPMXXXXXXXXSTGRPGAVPAPPASFNAHQQXXXXXXXXXXXXXXXTNFAGRSPPPXXXXXXXXXXXXXXXXXXXQAEGQEQLPGSVSFNHGGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----ENTVDELSDLLSSLNMAKFR 178
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1010.135.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized1.420e-7449.37protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.990e-2281.32protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001660Sterile alpha motif domainSMARTSM00454SAM_4coord: 250..316
e-value: 3.1E-5
score: 33.4
IPR013761Sterile alpha motif/pointed domain superfamilyGENE3D1.10.150.50coord: 255..314
e-value: 1.1E-10
score: 43.1
IPR013761Sterile alpha motif/pointed domain superfamilySUPERFAMILY47769SAM/Pointed domaincoord: 251..311

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1010contigEcto-sp9_F_contig1010:4662..7963 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1010.135.1mRNA_Ecto-sp9_F_contig1010.135.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1010 4662..7963 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1010.135.1 ID=prot_Ecto-sp9_F_contig1010.135.1|Name=mRNA_Ecto-sp9_F_contig1010.135.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=317bp
HWESNQNHYLLCAGYEAFPPGSGVYIELSVTDMMKVEDAGDGQRAGARVA
REVLGLPGANGQKWFVFHVSRPDEAHEEAFNITIRAIVDTSKMPAIPRRP
EPSRAPQLAQPPVPPPPPPTVRPGAVPAPPAPFNAHQQQQQQQRGRGQPF
AAPANFAGPSPPPSSPSTSYAFSNATSSASNSPAEGQKQLPGSVSFNRGG
PAAKAAAAAALPAPPPPPQASSLPGGGGGGGGYLQQQQQQQQQQPQQQQP
PDNTVDELSDLLSSLNMAKFRSAFDRQNVDLKALKMMTAESELSGIAIPL
GPRIKLMKELGIARGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001660SAM
IPR013761SAM/pointed_sf