prot_Ecto-sp9_F_contig10095.126.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10095.126.1
Unique Nameprot_Ecto-sp9_F_contig10095.126.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length84
Homology
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BLAST of mRNA_Ecto-sp9_F_contig10095.126.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9S6_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 4.950e-42
Identity = 69/83 (83.13%), Postives = 71/83 (85.54%), Query Frame = 0 
Query:    1 MGYSVHMQRLLGHLTWWIFPLLMPGYTDFTNDGKDLRANVFISYFFVGLALTVGLMEVWLRHTSPSGKVLRAGQEPELSIKAS 83
            MGYSVHMQRLLGHLTWWIFPLLMPGYTD TNDG +LRA VF  YF  G+ LTVG MEVWLRHT PSGKVLRAGQEP LSIK S
Sbjct:  211 MGYSVHMQRLLGHLTWWIFPLLMPGYTDLTNDGMELRARVFALYFVAGVVLTVGPMEVWLRHTLPSGKVLRAGQEPGLSIKDS 293
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BLAST of mRNA_Ecto-sp9_F_contig10095.126.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX30_ECTSI)

HSP 1 Score: 142 bits (357), Expect = 1.990e-39
Identity = 65/73 (89.04%), Postives = 68/73 (93.15%), Query Frame = 0 
Query:    1 MGYSVHMQRLLGHLTWWIFPLLMPGYTDFTNDGKDLRANVFISYFFVGLALTVGLMEVWLRHTSPSGKVLRAG 73
            MGYSVHMQRLLGHLTWW+FPLLMPGYTDFTN GK+LRANVFISYFFVGLALTVG MEVWLRHTSPSGK +  G
Sbjct:  209 MGYSVHMQRLLGHLTWWMFPLLMPGYTDFTNGGKELRANVFISYFFVGLALTVGPMEVWLRHTSPSGKDVARG 281
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10095.126.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEP7_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 1.760e-23
Identity = 41/45 (91.11%), Postives = 42/45 (93.33%), Query Frame = 0 
Query:    1 MGYSVHMQRLLGHLTWWIFPLLMPGYTDFTNDGKDLRANVFISYF 45
            MGYSVHMQRLLGHLTWWIFPLLMPGYTD T DGK+LRANVFIS F
Sbjct:    7 MGYSVHMQRLLGHLTWWIFPLLMPGYTDLTKDGKELRANVFISCF 51
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10095.126.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX31_ECTSI)

HSP 1 Score: 81.6 bits (200), Expect = 6.960e-17
Identity = 37/78 (47.44%), Postives = 52/78 (66.67%), Query Frame = 0 
Query:    1 MGYSVHMQRLLGHLTWWIFPLLMPG-YTDFTNDGKDLRANVFISYFFVGLALTVGLMEVWLRHTSPSGKVLRAGQEPE 77
            MGY+ H+QRLL  L+WW  PL+ P  YT+ + +G  LR +VF  YF V + L VGLME+WLRHT+ +   LR  ++ +
Sbjct:  179 MGYAAHVQRLLAALSWWAIPLVAPAKYTELSPEGALLRGDVFGGYFLVSIVLCVGLMEMWLRHTTTASGTLREERDQD 256
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10095.126.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
Uncharacterized4.950e-4283.13protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.990e-3989.04protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.760e-2391.11protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized6.960e-1747.44protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 61..83
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..39
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 40..60
NoneNo IPR availableTMHMMTMhelixcoord: 38..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10095contigEcto-sp9_F_contig10095:2847..3663 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10095.126.1mRNA_Ecto-sp9_F_contig10095.126.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10095 2847..3671 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10095.126.1 ID=prot_Ecto-sp9_F_contig10095.126.1|Name=mRNA_Ecto-sp9_F_contig10095.126.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=84bp
MGYSVHMQRLLGHLTWWIFPLLMPGYTDFTNDGKDLRANVFISYFFVGLA
LTVGLMEVWLRHTSPSGKVLRAGQEPELSIKAS*
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