prot_Ecto-sp9_F_contig10077.115.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10077.115.1
Unique Nameprot_Ecto-sp9_F_contig10077.115.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length91
Homology
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BLAST of mRNA_Ecto-sp9_F_contig10077.115.1 vs.
Match: RING-Gid-type (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT28_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 4.230e-21
Identity = 46/47 (97.87%), Postives = 46/47 (97.87%), Query Frame = 0 
Query:   45 QELMGSLLWSGNLEASPYSHLLSQELWTRVKESVAVDASRVSGLSRE 91
            QELMGSLLWSGNLEASPYSHLLS ELWTRVKESVAVDASRVSGLSRE
Sbjct:   96 QELMGSLLWSGNLEASPYSHLLSLELWTRVKESVAVDASRVSGLSRE 142
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BLAST of mRNA_Ecto-sp9_F_contig10077.115.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8M5_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 6.070e-21
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 0 
Query:   45 QELMGSLLWSGNLEASPYSHLLSQELWTRVKESVAVDASRVSGLSRE 91
            QELMGSLLWSGNLEASPYSHLLSQELWTRVKESVAVDASR+SGLSRE
Sbjct:  322 QELMGSLLWSGNLEASPYSHLLSQELWTRVKESVAVDASRISGLSRE 368
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BLAST of mRNA_Ecto-sp9_F_contig10077.115.1 vs.
Match: Uncharacterized (protein n=6 Tax=Maleae TaxID=721813 RepID=A0A540NTC5_MALBA)

HSP 1 Score: 50.8 bits (120), Expect = 2.710e-5
Identity = 32/75 (42.67%), Postives = 41/75 (54.67%), Query Frame = 0 
Query:    2 SPTLLKSHDSN--DLRNSNRLHIPLHVSTTLGSTARHRLETILPCQELMGSLLWSGNLEASPYSHLLSQELWTRV 74
            S  LLK H     ++   NR     +  T L   A + +  I   Q+LMGSLLW+G LE SPYSHLLS  +W +V
Sbjct:  185 SDILLKLHSLQFVEIVKGNRERALQYSKTCLAPFASNYMAEI---QKLMGSLLWTGRLEYSPYSHLLSPAIWDKV 256
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10077.115.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
RING-Gid-type4.230e-2197.87domain-containing protein n=1 Tax=Ectocarpus silic... [more]
Uncharacterized6.070e-2197.87protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.710e-542.67protein n=6 Tax=Maleae TaxID=721813 RepID=A0A540NT... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10077contigEcto-sp9_F_contig10077:3665..3937 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10077.115.1mRNA_Ecto-sp9_F_contig10077.115.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10077 3665..3937 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10077.115.1 ID=prot_Ecto-sp9_F_contig10077.115.1|Name=mRNA_Ecto-sp9_F_contig10077.115.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=91bp
PSPTLLKSHDSNDLRNSNRLHIPLHVSTTLGSTARHRLETILPCQELMGS
LLWSGNLEASPYSHLLSQELWTRVKESVAVDASRVSGLSRE
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