prot_Ecto-sp9_F_contig10069.109.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10069.109.1
Unique Nameprot_Ecto-sp9_F_contig10069.109.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length97
Homology
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BLAST of mRNA_Ecto-sp9_F_contig10069.109.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPE1_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 8.230e-52
Identity = 94/96 (97.92%), Postives = 94/96 (97.92%), Query Frame = 0 
Query:    1 MRLLAKEGGRGSSRAAGTGSTAAAASVTLEEAEASAREAVELWPAHTAAWLNLADVLVDTGRVQEALETLAELKAQLPGAKFDASEKAAIIRNTQR 96
            MRLLAKEGGRGSSRAAGTGSTAAAASVTLEEAEASAREAVELWPAHTAAWLNLADVLVDTGRVQEALETLAELKAQ P AKFDASEKAAIIRNTQR
Sbjct:  179 MRLLAKEGGRGSSRAAGTGSTAAAASVTLEEAEASAREAVELWPAHTAAWLNLADVLVDTGRVQEALETLAELKAQFPDAKFDASEKAAIIRNTQR 274
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10069.109.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Uncharacterized8.230e-5297.92protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 20..93
e-value: 1.9E-8
score: 36.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 29..79
NoneNo IPR availablePFAMPF14559TPR_19coord: 29..79
e-value: 4.0E-8
score: 33.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10069contigEcto-sp9_F_contig10069:1531..3217 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10069.109.1mRNA_Ecto-sp9_F_contig10069.109.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10069 240..4393 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10069.109.1 ID=prot_Ecto-sp9_F_contig10069.109.1|Name=mRNA_Ecto-sp9_F_contig10069.109.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=97bp
MRLLAKEGGRGSSRAAGTGSTAAAASVTLEEAEASAREAVELWPAHTAAW
LNLADVLVDTGRVQEALETLAELKAQLPGAKFDASEKAAIIRNTQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf