prot_Ecto-sp9_F_contig10057.93.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10057.93.1
Unique Nameprot_Ecto-sp9_F_contig10057.93.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length205
Homology
BLAST of mRNA_Ecto-sp9_F_contig10057.93.1 vs.
Match: CRM1_C (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS67_ECTSI)

HSP 1 Score: 395 bits (1016), Expect = 5.200e-131
Identity = 202/205 (98.54%), Postives = 204/205 (99.51%), Query Frame = 0
Query:    1 QDQVASFAGTDLRRGVYERLLTKIRLVVITRMAKPEEVLIVEDENAGEVVRETTKDTEAIAQYKSMRETLVYLTHLNNDDTEQIMLEKLSRQVEVSGTQFTWNSLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLVEMKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKISQK 205
            QDQVASFAGTDLRRGVYERLLTKIRLVVITRMAKPEEVLIVEDEN GEVVRETTKDTEAIAQYKSMRETLVYLTHLNNDDTEQIMLEKLS+QVEVSG+QFTWNSLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLVEMKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKISQK
Sbjct:  212 QDQVASFAGTDLRRGVYERLLTKIRLVVITRMAKPEEVLIVEDEN-GEVVRETTKDTEAIAQYKSMRETLVYLTHLNNDDTEQIMLEKLSKQVEVSGSQFTWNSLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLVEMKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKISQK 415          
BLAST of mRNA_Ecto-sp9_F_contig10057.93.1 vs.
Match: CRM1_C (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK2_9PHAE)

HSP 1 Score: 394 bits (1011), Expect = 1.100e-128
Identity = 201/204 (98.53%), Postives = 203/204 (99.51%), Query Frame = 0
Query:    2 DQVASFAGTDLRRGVYERLLTKIRLVVITRMAKPEEVLIVEDENAGEVVRETTKDTEAIAQYKSMRETLVYLTHLNNDDTEQIMLEKLSRQVEVSGTQFTWNSLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLVEMKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKISQK 205
            DQVASFAGTDLRRGVYERLLTKIRLVVITRMAKPEEVLIVEDEN GEVVRETTKDTEAIAQYKSMRETLVYLTHLNNDDTEQIMLEKLSRQVEVSG+QFTWNSLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLVEMKRGKDNKAVVASNIMYVVGQYPRFL+AHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKISQK
Sbjct:  260 DQVASFAGTDLRRGVYERLLTKIRLVVITRMAKPEEVLIVEDEN-GEVVRETTKDTEAIAQYKSMRETLVYLTHLNNDDTEQIMLEKLSRQVEVSGSQFTWNSLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLVEMKRGKDNKAVVASNIMYVVGQYPRFLKAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKISQK 462          
BLAST of mRNA_Ecto-sp9_F_contig10057.93.1 vs.
Match: Importin (N-terminal domain-containing protein n=27 Tax=Oomycota TaxID=4762 RepID=M4BY55_HYAAE)

HSP 1 Score: 314 bits (805), Expect = 6.730e-98
Identity = 162/209 (77.51%), Postives = 182/209 (87.08%), Query Frame = 0
Query:    1 QDQVASFAG----TDLRRGVYERLLTKIRLVVITRMAKPEEVLIVEDENAGEVVRETTKDTEAIAQYKSMRETLVYLTHLNNDDTEQIMLEKLSRQVEVSGTQFTWNSLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLVEMKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKISQK 205
            Q+Q+   AG    T  RR +   ++ ++R V+I++M KP EVLIVEDEN GE+VRETTKDTEA++QYK+M ETLVYLTHLN DDTE IMLEKL+ QVE  GT+++WN+LNTLCWAIGSISGAM+EE EKRFLVTVIKDLL L EMKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKISQK
Sbjct:  310 QNQMNPLAGFQNQTRSRRDLVSPVMNRVRHVMISKMVKPSEVLIVEDEN-GEIVRETTKDTEALSQYKTMHETLVYLTHLNYDDTETIMLEKLTAQVE--GTEWSWNNLNTLCWAIGSISGAMSEENEKRFLVTVIKDLLGLCEMKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKISQK 515          
BLAST of mRNA_Ecto-sp9_F_contig10057.93.1 vs.
Match: Exportin1 (n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ33_9STRA)

HSP 1 Score: 313 bits (803), Expect = 2.610e-97
Identity = 158/193 (81.87%), Postives = 176/193 (91.19%), Query Frame = 0
Query:   13 RRGVYERLLTKIRLVVITRMAKPEEVLIVEDENAGEVVRETTKDTEAIAQYKSMRETLVYLTHLNNDDTEQIMLEKLSRQVEVSGTQFTWNSLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLVEMKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKISQK 205
            R   Y+ +L++IR V+I RM+KPEEVLIVEDEN GE+VRETT+DTEAIAQYK+MRETLVYLTHL+ +DTE IML KL  QV+  G +F+WN+LNTLCWAIGSISGAM+EEEEKRFLVTVIKDLLNL EMKRGKDNKAV+ASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHE HPGVQDMACDTFLKI+QK
Sbjct:  378 RTAAYKGILSRIRHVLIMRMSKPEEVLIVEDEN-GEIVRETTRDTEAIAQYKTMRETLVYLTHLHYEDTESIMLNKLCLQVD--GREFSWNNLNTLCWAIGSISGAMSEEEEKRFLVTVIKDLLNLCEMKRGKDNKAVIASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHETHPGVQDMACDTFLKIAQK 567          
BLAST of mRNA_Ecto-sp9_F_contig10057.93.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AX47_9STRA)

HSP 1 Score: 288 bits (737), Expect = 8.730e-97
Identity = 144/173 (83.24%), Postives = 159/173 (91.91%), Query Frame = 0
Query:   33 AKPEEVLIVEDENAGEVVRETTKDTEAIAQYKSMRETLVYLTHLNNDDTEQIMLEKLSRQVEVSGTQFTWNSLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLVEMKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKISQK 205
            AKPEEVLIVEDEN G++VRETTKDT+ IAQYK+MRETLV+LTHLN DDTE IML KL+ QV+  GT ++WN+LNTLCWAIGSISGAM+EEEEKRFLVTVIKDLL L E KRGKDNKAV+ASNIMYVVGQYPRFL+AHWKFL+TVVNKLFEFMHE HPGVQDMACDTFLKI+ K
Sbjct:    1 AKPEEVLIVEDEN-GDIVRETTKDTDVIAQYKTMRETLVFLTHLNCDDTESIMLAKLTEQVD--GTAWSWNNLNTLCWAIGSISGAMSEEEEKRFLVTVIKDLLGLCEQKRGKDNKAVIASNIMYVVGQYPRFLKAHWKFLKTVVNKLFEFMHESHPGVQDMACDTFLKIATK 170          
BLAST of mRNA_Ecto-sp9_F_contig10057.93.1 vs.
Match: CRM1_C (domain-containing protein (Fragment) n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6V416_9STRA)

HSP 1 Score: 303 bits (777), Expect = 2.140e-96
Identity = 152/193 (78.76%), Postives = 176/193 (91.19%), Query Frame = 0
Query:   13 RRGVYERLLTKIRLVVITRMAKPEEVLIVEDENAGEVVRETTKDTEAIAQYKSMRETLVYLTHLNNDDTEQIMLEKLSRQVEVSGTQFTWNSLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLVEMKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKISQK 205
            R+ + + +L+++R+V+I++M KP EVLIVEDEN GE+VRETTKDTEA++QYK+M E LVYLTHL+ DDTE IMLEKL+ QVE +G  ++WN+LNTLCWAIGSISGAM+EE EKRFLVTVIKDLL L EMKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFL+TVVNKLFEFMHELHPGVQDMACDTFLKI+QK
Sbjct:  221 RKSLLKVILSRLRVVMISKMVKPSEVLIVEDEN-GEIVRETTKDTEALSQYKTMHEGLVYLTHLDYDDTENIMLEKLTDQVEGNG--WSWNNLNTLCWAIGSISGAMSEENEKRFLVTVIKDLLGLCEMKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHELHPGVQDMACDTFLKIAQK 410          
BLAST of mRNA_Ecto-sp9_F_contig10057.93.1 vs.
Match: Embargoed ((Fragment) n=7 Tax=Elateriformia TaxID=41087 RepID=A0A2L0CVE5_9COLE)

HSP 1 Score: 294 bits (752), Expect = 2.840e-96
Identity = 145/197 (73.60%), Postives = 173/197 (87.82%), Query Frame = 0
Query:    9 GTDLRRGVYERLLTKIRLVVITRMAKPEEVLIVEDENAGEVVRETTKDTEAIAQYKSMRETLVYLTHLNNDDTEQIMLEKLSRQVEVSGTQFTWNSLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLVEMKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKISQK 205
            GT  RRG+Y+ +L K+R ++I+RMAKPEEVL+VE++N GEVVRE  KDT++I  YK+MRETLVYLTHL+  DTE+IM EKL  QV  +G++++W +LNTLCWAIGSISGAM+EE+EKRFLVTVIKDLL L E KRGKDNKA++ASNIMYVVGQYPRFLRAHWKFL+TVVNKLFEFMHE H GVQDMACDTF+KI+ K
Sbjct:  151 GTSGRRGLYQEVLNKVRYIMISRMAKPEEVLVVENDN-GEVVREFMKDTDSINLYKNMRETLVYLTHLDYTDTERIMTEKLQNQV--NGSEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAIIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIALK 344          
BLAST of mRNA_Ecto-sp9_F_contig10057.93.1 vs.
Match: Importin (N-terminal domain-containing protein n=14 Tax=Albugo TaxID=65356 RepID=A0A024GRP6_9STRA)

HSP 1 Score: 312 bits (799), Expect = 2.900e-96
Identity = 157/193 (81.35%), Postives = 176/193 (91.19%), Query Frame = 0
Query:   13 RRGVYERLLTKIRLVVITRMAKPEEVLIVEDENAGEVVRETTKDTEAIAQYKSMRETLVYLTHLNNDDTEQIMLEKLSRQVEVSGTQFTWNSLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLVEMKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKISQK 205
            R+ +   +L+++R V+I++M KP EVLIVEDEN GE+VRETTKDTEA++QYK+M ETLVYLTHLN DDTE IMLEKL+ QVE  GT+++WN+LNTLCWAIGSISGAM+EE EKRFLVTVIKDLL L EMKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKISQK
Sbjct:  454 RKDLVASILSQVRHVMISKMVKPSEVLIVEDEN-GEIVRETTKDTEALSQYKTMHETLVYLTHLNYDDTETIMLEKLTAQVE--GTEWSWNNLNTLCWAIGSISGAMSEENEKRFLVTVIKDLLGLCEMKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKISQK 643          
BLAST of mRNA_Ecto-sp9_F_contig10057.93.1 vs.
Match: CRM1_C (domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397C6E5_9STRA)

HSP 1 Score: 303 bits (777), Expect = 4.540e-96
Identity = 152/193 (78.76%), Postives = 176/193 (91.19%), Query Frame = 0
Query:   13 RRGVYERLLTKIRLVVITRMAKPEEVLIVEDENAGEVVRETTKDTEAIAQYKSMRETLVYLTHLNNDDTEQIMLEKLSRQVEVSGTQFTWNSLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLVEMKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKISQK 205
            R+ + + +L+++R+V+I++M KP EVLIVEDEN GE+VRETTKDTEA++QYK+M E LVYLTHL+ DDTE IMLEKL+ QVE +G  ++WN+LNTLCWAIGSISGAM+EE EKRFLVTVIKDLL L EMKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFL+TVVNKLFEFMHELHPGVQDMACDTFLKI+QK
Sbjct:   76 RKSLLKVILSRLRVVMISKMVKPSEVLIVEDEN-GEIVRETTKDTEALSQYKTMHEGLVYLTHLDYDDTENIMLEKLTDQVEGNG--WSWNNLNTLCWAIGSISGAMSEENEKRFLVTVIKDLLGLCEMKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHELHPGVQDMACDTFLKIAQK 265          
BLAST of mRNA_Ecto-sp9_F_contig10057.93.1 vs.
Match: CRM1_C (domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BT21_EMIHU)

HSP 1 Score: 308 bits (790), Expect = 4.750e-96
Identity = 155/193 (80.31%), Postives = 176/193 (91.19%), Query Frame = 0
Query:   13 RRGVYERLLTKIRLVVITRMAKPEEVLIVEDENAGEVVRETTKDTEAIAQYKSMRETLVYLTHLNNDDTEQIMLEKLSRQVEVSGTQFTWNSLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLVEMKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFLKISQK 205
            R  +Y  +LTK+R ++++RMAKPEEVLIVEDEN GE+VRET KD++AI  YK+MRETLVYLTHLN DDTE IML+KL  Q +V G+Q++W++LNTLCWAIGSISGAM+EE+EKRFLVTVIKDLL L EMKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFL+TVVNKLFEFMHELHPGVQDMACDTFLKISQK
Sbjct:  456 RLQLYAPILTKLRQLMVSRMAKPEEVLIVEDEN-GEIVRETMKDSDAITLYKTMRETLVYLTHLNYDDTENIMLDKL--QYQVDGSQWSWHNLNTLCWAIGSISGAMSEEDEKRFLVTVIKDLLGLCEMKRGKDNKAVVASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHELHPGVQDMACDTFLKISQK 645          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10057.93.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
CRM1_C5.200e-13198.54domain-containing protein n=1 Tax=Ectocarpus silic... [more]
CRM1_C1.100e-12898.53domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Importin6.730e-9877.51N-terminal domain-containing protein n=27 Tax=Oomy... [more]
Exportin12.610e-9781.87n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Y... [more]
Hypothetical8.730e-9783.24protein (Fragment) n=1 Tax=Minutocellus polymorphu... [more]
CRM1_C2.140e-9678.76domain-containing protein (Fragment) n=5 Tax=Aphan... [more]
Embargoed2.840e-9673.60(Fragment) n=7 Tax=Elateriformia TaxID=41087 RepID... [more]
Importin2.900e-9681.35N-terminal domain-containing protein n=14 Tax=Albu... [more]
CRM1_C4.540e-9678.76domain-containing protein (Fragment) n=1 Tax=Aphan... [more]
CRM1_C4.750e-9680.31domain-containing protein n=1 Tax=Emiliania huxley... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040485Exportin-1, repeat 3PFAMPF18787CRM1_repeat_3coord: 97..146
e-value: 1.5E-28
score: 98.6
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 2..205
e-value: 7.6E-103
score: 347.2
IPR041235Exportin-1, repeat 2PFAMPF18784CRM1_repeat_2coord: 13..81
e-value: 2.0E-30
score: 104.2
NoneNo IPR availablePANTHERPTHR11223:SF2EXPORTIN-1coord: 13..205
NoneNo IPR availablePANTHERPTHR11223EXPORTIN 1/5coord: 13..205
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 16..204

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10057contigEcto-sp9_F_contig10057:126..2880 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10057.93.1mRNA_Ecto-sp9_F_contig10057.93.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10057 126..2880 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10057.93.1 ID=prot_Ecto-sp9_F_contig10057.93.1|Name=mRNA_Ecto-sp9_F_contig10057.93.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=205bp
QDQVASFAGTDLRRGVYERLLTKIRLVVITRMAKPEEVLIVEDENAGEVV
RETTKDTEAIAQYKSMRETLVYLTHLNNDDTEQIMLEKLSRQVEVSGTQF
TWNSLNTLCWAIGSISGAMNEEEEKRFLVTVIKDLLNLVEMKRGKDNKAV
VASNIMYVVGQYPRFLRAHWKFLRTVVNKLFEFMHELHPGVQDMACDTFL
KISQK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040485XPO1_repeat_3
IPR011989ARM-like
IPR041235Exp1_repeat_2
IPR016024ARM-type_fold