prot_Ecto-sp9_F_contig100.62.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig100.62.1
Unique Nameprot_Ecto-sp9_F_contig100.62.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length193
Homology
BLAST of mRNA_Ecto-sp9_F_contig100.62.1 vs.
Match: FHA-HIT (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEA7_ECTSI)

HSP 1 Score: 348 bits (894), Expect = 1.140e-116
Identity = 174/192 (90.62%), Postives = 178/192 (92.71%), Query Frame = 0
Query:    1 MPAELQREVYFSDDQCVVVYDGYPKSRYHLLLLPKPKFLDVKQASELHRDEHLSSLRQLHATAAAVAEALSQQGAGVVRCGYHGIPSLEPLHLHIISQDFDSARLTKRKHWNSFTTGTYFFLDASWVEARLLERGSLELDKARLKALEATPLRCFRCQSPMTNMTKLKEHLLGCNELLPKKGSCVGGGSSNA 192
            MP ELQREVYFSD+QCVVVYDGYPKSRYHLLLLPKPKFLDVKQASEL RDEHLSSLRQLHATA AVAEALSQQGAGV+RCGYHGIPSLEPLHLHIISQDFDS RLTKRKHWNSFTT   FFLDASWVEARLLERGSL LDK RLKALEATPLRCFRC SPMTNMTKLKEHLLGCN  +PKK SC GGGSS+A
Sbjct:  295 MPVELQREVYFSDNQCVVVYDGYPKSRYHLLLLPKPKFLDVKQASELRRDEHLSSLRQLHATATAVAEALSQQGAGVIRCGYHGIPSLEPLHLHIISQDFDSERLTKRKHWNSFTTD--FFLDASWVEARLLERGSLGLDKERLKALEATPLRCFRCHSPMTNMTKLKEHLLGCNLPVPKKNSCGGGGSSDA 484          
BLAST of mRNA_Ecto-sp9_F_contig100.62.1 vs.
Match: HIT (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K612_9PHAE)

HSP 1 Score: 234 bits (598), Expect = 3.740e-72
Identity = 113/120 (94.17%), Postives = 117/120 (97.50%), Query Frame = 0
Query:    1 MPAELQREVYFSDDQCVVVYDGYPKSRYHLLLLPKPKFLDVKQASELHRDEHLSSLRQLHATAAAVAEALSQQGAGVVRCGYHGIPSLEPLHLHIISQDFDSARLTKRKHWNSFTTGTYF 120
            MP ELQREV+FS+DQCVVVYDGYPKSRYHLLLLPKPKFLDVKQASEL RDEHLSSLRQLHATAAAVAEALSQQGAGV+RCGYHGIPSLEPLHLHIISQDFDS RLTKRKHWNSFTTGT+F
Sbjct:  284 MPDELQREVFFSNDQCVVVYDGYPKSRYHLLLLPKPKFLDVKQASELRRDEHLSSLRQLHATAAAVAEALSQQGAGVIRCGYHGIPSLEPLHLHIISQDFDSERLTKRKHWNSFTTGTFF 403          
BLAST of mRNA_Ecto-sp9_F_contig100.62.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G951_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 4.960e-50
Identity = 91/190 (47.89%), Postives = 118/190 (62.11%), Query Frame = 0
Query:    4 ELQREVYFSDDQCVVVYDGYPKSRYHLLLLPKPKFLDVKQASELHRDEHLSSLRQLHATAAAVAEALSQQG---------AGVVRCGYHGIPSLEPLHLHIISQDFDSARLTKRKHWNSFTTGTYFFLDASWVEARLLERGSLELDKARLKALEATPLRCFRC--QSPMTNMTKLKEHLLGCNELLPKKG 182
            ++Q EV++ D+  +V YDG+PK ++HLL++P+  FL+V   S L R EHL  LR+LHA   A+A+ALS Q          A V+RCGYH +PS EPLHLH++S D D   L ++ HWNSFTT    FL+ASWVE RL ERGSL LD    + LE   LRCFRC  +    +M  LK H   C   +P  G
Sbjct:   87 QIQGEVFYMDEDVMVTYDGFPKGKFHLLVVPRETFLNVTGPSAL-RKEHLPKLRRLHAMGTALAKALSLQAEVRELSHPSANVIRCGYHAMPSQEPLHLHVVSMDLDGTGLKRKTHWNSFTTD--LFLEASWVERRLEERGSLGLDMRNFRELEHVKLRCFRCPGEPEFRHMESLKAHNRACTAPVPAGG 273          
BLAST of mRNA_Ecto-sp9_F_contig100.62.1 vs.
Match: HIT (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUS4_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 1.340e-49
Identity = 80/139 (57.55%), Postives = 104/139 (74.82%), Query Frame = 0
Query:    5 LQREVYFSDDQCVVVYDGYPKSRYHLLLLPKPKFLDVKQASELHRDEHLSSLRQLHATAAAVAEALSQQGAGVVRCGYHGIPSLEPLHLHIISQDFDSARLTKRKHWNSFTTGTYFFLDASWVEARLLERGSLELDKAR 143
            LQ ++YF D++ +V+YDGYPK+R+HLLL+P+P FLDV + S+L R EHLS+LRQ+HA   AVAE LSQQG G +R G H +PS+EPLH+HIISQDFDS R+   +HWN FTT    FL+ +W+E  L   G L+LD  R
Sbjct:   56 LQDQIYFQDERFMVIYDGYPKARHHLLLMPRPSFLDVIRPSDLRR-EHLSALRQMHALGRAVAEGLSQQGIGEIRIGVHAVPSMEPLHMHIISQDFDSERMRMPRHWNIFTTD--IFLEPAWIEEMLERHGCLQLDMER 191          
BLAST of mRNA_Ecto-sp9_F_contig100.62.1 vs.
Match: Aprataxin (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G953_ECTSI)

HSP 1 Score: 154 bits (388), Expect = 3.360e-44
Identity = 71/114 (62.28%), Postives = 91/114 (79.82%), Query Frame = 0
Query:    5 LQREVYFSDDQCVVVYDGYPKSRYHLLLLPKPKFLDVKQASELHRDEHLSSLRQLHATAAAVAEALSQQGAGVVRCGYHGIPSLEPLHLHIISQDFDSARLTKRKHWNSFTTGT 118
            LQ ++YF D++ +V+YDGYPK+R+HLLL+P+P FLDV + S+L R EHLS+L Q+HA   AVAE LSQQG G +R G H +PS+EPLH+HIISQDFDS RL   +HWN FTTG+
Sbjct:   55 LQDQIYFQDERFMVIYDGYPKARHHLLLMPRPSFLDVMRPSDLRR-EHLSALHQMHALGRAVAEDLSQQGIGEIRIGVHAVPSMEPLHMHIISQDFDSERLRMPRHWNIFTTGS 167          
BLAST of mRNA_Ecto-sp9_F_contig100.62.1 vs.
Match: Basic (helix-loop-helix family protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TK61_9STRA)

HSP 1 Score: 149 bits (376), Expect = 3.150e-39
Identity = 72/175 (41.14%), Postives = 106/175 (60.57%), Query Frame = 0
Query:    4 ELQREVYFSDDQCVVVYDGYPKSRYHLLLLPKPKFLDVKQASELHRDEHLSSLRQLHATAAAVAEALSQQGAGV-VRCGYHGIPSLEPLHLHIISQDFDSARLTKRKHWNSFTTGTYFFLDASWVEARLLERGSLELDKARLKALEATPLRCFRCQSPMTNMTKLKEHLLGCNEL 177
            EL+  +++   + + +YDGYPK++ HLLL+PKP+FL +   +EL  D+H   + +LH+ A  +A  L +   G+ +R GYH +PSL PLH+HI+SQDFDS  L  ++HWNSFTT   FFLD   VE  L   G + +     +AL    LRC  C +    +  LK+H+ GC  +
Sbjct:  318 ELRHFIFYETSEWMAIYDGYPKAKVHLLLIPKPEFLTINSVTELSHDKHNKQISRLHSAARCIATKLEKDTNGLRLRMGYHSLPSLRPLHIHIVSQDFDSPALKTKRHWNSFTTP--FFLDLLQVETALQIHGKVTVRHEDAEALLKLSLRCHACGAVQKTIPDLKQHVKGCESM 490          
BLAST of mRNA_Ecto-sp9_F_contig100.62.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SCH0_9STRA)

HSP 1 Score: 138 bits (347), Expect = 2.770e-35
Identity = 81/178 (45.51%), Postives = 104/178 (58.43%), Query Frame = 0
Query:    2 PAELQREVYFSDDQCVVVYDGYPKSRYHLLLLPKPKFLDVKQASELHRDEHLSSLRQLHATAAAVAEALSQQGAGV--VRCGYHGIPSLEPLHLHIISQDFDSARLTKRKHWNSFTTGTYFFLD--ASWVEA-RLLERGSLELDKARLKALEATPLRCFRCQSP---MTNMTKLKEHL 171
            P   + +V++ D+ C+VVYD YPK+R HLL+LPK  FL +++  +     HL  LR LH  AA+VA+ L   GA V  VRCGYH IPSLEPLH+H+ISQDFDS  L  +KHWNSFTT  +   +  A WVE  +  +    E    + K + A PL             NM  LKEHL
Sbjct:  267 PGAAKPQVFYEDECCLVVYDAYPKARTHLLVLPKASFLSLRRP-QFASAGHLPRLRHLHDRAASVAKWLQSSGAAVAPVRCGYHAIPSLEPLHIHVISQDFDSPCLKTKKHWNSFTTDYFVPCEVFARWVEGDKSADPWLGESTATKWKEMLAKPLEIISSSGASLTFKNMPALKEHL 443          
BLAST of mRNA_Ecto-sp9_F_contig100.62.1 vs.
Match: aprataxin-like (n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D6DC73)

HSP 1 Score: 126 bits (316), Expect = 5.150e-33
Identity = 67/161 (41.61%), Postives = 96/161 (59.63%), Query Frame = 0
Query:   13 DDQCVVVYDGYPKSRYHLLLLPKPKFLDVKQASELHRDEHLSSLRQLHATAAAVA-EALSQQGAGVVRCGYHGIPSLEPLHLHIISQDFDSARLTKRKHWNSFTTGTYFFLDASWVEARLLERGSLELDKARLKALEATPLRCFRCQSPMTNMTKLKEHLL 172
            DD+ VV+ D YPK+RYH L+LPK     +K      + +HL  L+ +H     +  EA+ ++G    R GYH +PS+  LHLH ISQDFDS  L  +KHWNSFT+   +F+D+  V  +L + G ++      +A    PLRC  C+  +TNM KLKEH++
Sbjct:   44 DDKVVVIKDKYPKARYHYLVLPKENISKLKAL----QPDHLELLKHMHEVGERIIKEAIGEEGLSY-RLGYHAVPSMSHLHLHAISQDFDSPSLKTKKHWNSFTSA--YFVDSKEVMDQLEKEGKVDTSAKNPEAQLKLPLRCHVCKKELTNMPKLKEHIV 197          
BLAST of mRNA_Ecto-sp9_F_contig100.62.1 vs.
Match: Hypothetical (protein n=6 Tax=unclassified Rotaria TaxID=2631648 RepID=A0A813T0Q8_9BILA)

HSP 1 Score: 125 bits (313), Expect = 1.800e-32
Identity = 72/167 (43.11%), Postives = 94/167 (56.29%), Query Frame = 0
Query:   11 FSDDQCVVVYDGYPKSRYHLLLLPKPKFLDVKQASELHRDEHLSSLRQLHATAAAVAE--ALSQQGAGVV---RCGYHGIPSLEPLHLHIISQDFDSARLTKRKHWNSFTTGTYFFLDASWVEARLLERGSLELDKARLKALEATPLRCFRCQSPMTNMTKLKEHLL 172
            + DD C V+ D YPK+R HLL++P     ++K  +    D HL  L+ +      VAE  A      G     R GYH IPS+  LH+H+ISQDF S  L  +KHWNSFT+G  +FLDAS V   L   GS+ +D  R+  L    L+C RC +  T M KLK+HLL
Sbjct:   47 YKDDLCTVIKDKYPKARIHLLVMPNEHIANLKSIN----DTHLPLLKHMLKVGKEVAEKTAAKANARGSFTDFRYGYHAIPSMALLHMHVISQDFISDSLKTKKHWNSFTSG--YFLDASQVIDDLQANGSVRIDTTRMGKLLDNELKCHRCSNKFTTMPKLKQHLL 207          
BLAST of mRNA_Ecto-sp9_F_contig100.62.1 vs.
Match: aprataxin (isoform X1 n=2 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=UPI001C727C25)

HSP 1 Score: 124 bits (310), Expect = 3.570e-32
Identity = 70/167 (41.92%), Postives = 95/167 (56.89%), Query Frame = 0
Query:   12 SDDQCVVVYDGYPKSRYHLLLLPKPKFLDVKQASELHRDEHLSSLRQLHATAAAVAEALSQQGAGVVRCGYHGIPSLEPLHLHIISQDFDSARLTKRKHWNSFTTGTYFFLDASWVEARLLERGSLE--LDKARLKALEATPLRCFRCQSPMTNMTKLKEHLLGCNE 176
            SDD  V++ D YPK+R+H L+LPK    D+K      +  HL  L+ +H  A  + E+      GV R GYH +PS+  LHLH+ISQDFDS  L  + HWNSFTT   +F+D+  +  R LE  S    +D  + K L   PLRC  C+  +  M KLK H+L C +
Sbjct:   39 SDDLVVIIKDKYPKARHHYLILPKENIPDLKSL----KSSHLPLLKHMHEQANKLTESRINSECGV-RIGYHAVPSMSHLHLHVISQDFDSPCLKTKTHWNSFTTE--YFIDSEDI-IRDLENNSCVKCIDPNKSKELLKLPLRCHNCKQELPTMPKLKSHVLNCKK 197          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig100.62.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
FHA-HIT1.140e-11690.63protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
HIT3.740e-7294.17domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Uncharacterized4.960e-5047.89protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
HIT1.340e-4957.55domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Aprataxin3.360e-4462.28n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7... [more]
Basic3.150e-3941.14helix-loop-helix family protein n=2 Tax=Nannochlor... [more]
Hypothetical2.770e-3545.51protein n=1 Tax=Rhizochromulina marina TaxID=10348... [more]
aprataxin-like5.150e-3341.61n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D... [more]
Hypothetical1.800e-3243.11protein n=6 Tax=unclassified Rotaria TaxID=2631648... [more]
aprataxin3.570e-3241.92isoform X1 n=2 Tax=Parasteatoda tepidariorum TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF11969DcpS_Ccoord: 6..110
e-value: 3.8E-20
score: 72.5
NoneNo IPR availablePANTHERPTHR12486APRATAXIN-RELATEDcoord: 3..177
NoneNo IPR availablePANTHERPTHR12486:SF4APRATAXINcoord: 3..177
IPR032566Aprataxin, C2HE/C2H2/C2HC zinc fingerPFAMPF16278zf-C2HEcoord: 118..174
e-value: 2.2E-10
score: 40.8
IPR036265HIT-like superfamilyGENE3D3.30.428.10coord: 2..173
e-value: 5.8E-46
score: 158.6
IPR036265HIT-like superfamilySUPERFAMILY54197HIT-likecoord: 4..120
IPR011146HIT-like domainPROSITEPS51084HIT_2coord: 1..105
score: 10.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig100contigEcto-sp9_F_contig100:54722..58871 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig100.62.1mRNA_Ecto-sp9_F_contig100.62.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig100 54343..58991 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig100.62.1 ID=prot_Ecto-sp9_F_contig100.62.1|Name=mRNA_Ecto-sp9_F_contig100.62.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=193bp
MPAELQREVYFSDDQCVVVYDGYPKSRYHLLLLPKPKFLDVKQASELHRD
EHLSSLRQLHATAAAVAEALSQQGAGVVRCGYHGIPSLEPLHLHIISQDF
DSARLTKRKHWNSFTTGTYFFLDASWVEARLLERGSLELDKARLKALEAT
PLRCFRCQSPMTNMTKLKEHLLGCNELLPKKGSCVGGGSSNA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032566Znf-C2HE
IPR036265HIT-like_sf
IPR011146HIT-like