mRNA_Ecto-sp9_F_contig9977.18039.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig9977.18039.1
Unique NamemRNA_Ecto-sp9_F_contig9977.18039.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9977.18039.1 vs.
Match: Serine/threonine-protein (phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JV36_9PHAE)

HSP 1 Score: 434 bits (1116), Expect = 7.390e-147
Identity = 207/213 (97.18%), Postives = 211/213 (99.06%), Query Frame = 1 
Query:    1 RRQKDLRTIMHCALWSDPDLSPSLPNPQQNPRGAGVLFGPDSTKSFLEENGLDMVVRSHECVEEGFDLPFEEDMEGCCATIFSASNYGGSMNQGATMRFSLNETDDSFAAGGMRATSPEVHYTVFDYQLTAADKDHGHLLKANQSGLSSLVLRKKRALTAAFTQVDKQGDGFVTKDKWCQVMDNVTGLQISWKAILNIIVDEEDREGDKINWR 639
            RRQKDLRTIMHCALWSDPDLSPSLPNPQ NPRGAGVLFGPDSTKSFL+ENGLDMVVRSHECVEEGFDLPFE++MEGCCATIFSASNYGGSMNQGATMRFSLNETDDSFAAGGMRATSPEVHYTVF+YQLTAADKDHGHLLKANQSGLSSLVLRKKRALTAAFTQVDKQGDGFVTKDKWCQVM NVTGLQISWKAILNIIVDEEDREGDKINWR
Sbjct:  387 RRQKDLRTIMHCALWSDPDLSPSLPNPQPNPRGAGVLFGPDSTKSFLDENGLDMVVRSHECVEEGFDLPFEDEMEGCCATIFSASNYGGSMNQGATMRFSLNETDDSFAAGGMRATSPEVHYTVFEYQLTAADKDHGHLLKANQSGLSSLVLRKKRALTAAFTQVDKQGDGFVTKDKWCQVMSNVTGLQISWKAILNIIVDEEDREGDKINWR 599
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9977.18039.1 vs.
Match: Serine/threonine-protein (phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDI6_9STRA)

HSP 1 Score: 263 bits (672), Expect = 7.100e-81
Identity = 131/217 (60.37%), Postives = 164/217 (75.58%), Query Frame = 1 
Query:    4 RQKDLRTIMHCALWSDPDLSPSLPNPQQNPRGAGVLFGPDSTKSFLEENGLDMVVRSHECVEEGFDLPFEEDMEGCCATIFSASNYGGSMNQGATMRFSLNETDDSFAAGGMRATS-PE---VHYTVFDYQLTAADKDHG--HLLKANQSGLSSLVLRKKRALTAAFTQVDKQGDGFVTKDKWCQVMDNVTGLQISWKAILNIIVDEEDREGDKINW 636
            R  DL+ +MH ALWSDPDL  SLP PQ NPRGAG+LFGPD T SFLE N L M+VRSHECVE+GFDLPFE+ MEG CATIFSASNYGGSMN+GA M FSLN+++DSF AGG  A S P+   + YTV DYQL+ +    G   +  AN++ LS+LVLRKK+ L  AF QVD+   GF+T DKW  V+ +VTGL+I+W ++++++V  EDR+G+ INW
Sbjct:  350 RDVDLQKLMHGALWSDPDLDLSLPEPQANPRGAGILFGPDLTMSFLETNQLVMIVRSHECVEDGFDLPFEDFMEGTCATIFSASNYGGSMNRGAVMNFSLNDSEDSFLAGGEYAESKPDNVPLFYTVKDYQLSLSVSRGGVDGVTAANRTSLSTLVLRKKKVLAQAFQQVDRNSTGFITIDKWSGVLSHVTGLEIAWPSLIDLLVSPEDRDGNLINW 566
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BLAST of mRNA_Ecto-sp9_F_contig9977.18039.1 vs.
Match: Serine/threonine-protein (phosphatase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TWW2_HETAK)

HSP 1 Score: 176 bits (446), Expect = 4.660e-48
Identity = 96/214 (44.86%), Postives = 131/214 (61.21%), Query Frame = 1 
Query:   13 DLRTIMHCALWSDPDLSPSLPNPQQNPRGAGVLFGPDSTKSFLEENGLDMVVRSHECVEEGFDLPFEEDMEGCCATIFSASNYGGSMNQGATMRFSLNETDDSFAAGGMRATSP----EVHYTVFDYQLTAA--DKDHGHLLKANQSGLSSLVLRKKRALTAAFTQVDKQGDGFVTKDKWCQVMDNVTGLQISWKAILNIIVDEEDREGDKINW 636
            +L+ +M CALWSDPD    + +   NPRGAGVLFGPD T++FL E  LDMVVRSHECV++G+D P+E++  G   TIFSASNYGGS N GA +RFSL E    +   G    +P     + YTV  Y +  A    +   L+K N   +  LV +K+R L AAF +     +  V+K  W +VM  VTGLQ+ W +++  +V  +  EGD+IN+
Sbjct:  340 ELKQLMRCALWSDPDPDFGVGH---NPRGAGVLFGPDVTQTFLRETALDMVVRSHECVKDGWDHPYEDEYAGLLGTIFSASNYGGSGNHGAYLRFSLTEPPGDYYVAGESEDAPYKGVPIFYTVNKYNIDDAYDAMNTTSLVKIN---IFDLVFKKRRELEAAFREKAGGDNLLVSKQAWSEVMVQVTGLQVLWSSLIATLVPNDALEGDQINY 547
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BLAST of mRNA_Ecto-sp9_F_contig9977.18039.1 vs.
Match: Serine/threonine-protein (phosphatase n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U285_9STRA)

HSP 1 Score: 159 bits (401), Expect = 1.220e-41
Identity = 94/207 (45.41%), Postives = 120/207 (57.97%), Query Frame = 1 
Query:   16 LRTIMHCALWSDPDLSPSLPNPQQNPRGAGVLFGPDSTKSFLEENGLDMVVRSHECVEEGFDLPFEEDMEGCCATIFSASNYGGSMNQGATMRFSLNETD-DSFAAGGMRATSPEVH---YTVFDYQLTAADKDHGHLLKANQSGLSSLVLRKKRALTAAFTQVDKQGDGFVTKDKWCQVMDNVTGLQISWKAILNIIVDEEDREGD 624
            L  +   ALWSDP +   +  P  NPRGAGV+FGP  T+ FL  N L MVVRSHECV EGFDLPF++D  G  AT+FSASNYG S N GA MRF+  +   +S  AG     S   +   YTV  Y         G L+ AN++ L  +VLRKK  L +AF +    G+G VT  +W ++M +VTGL ISW  +   +V E   + D
Sbjct:  351 LSELNRDALWSDP-VRDDIREP--NPRGAGVVFGPSVTREFLTNNDLRMVVRSHECVREGFDLPFDDDDMGILATVFSASNYGNSANNGAFMRFTKGKRPANSLLAGSAEVASSPTNPLWYTVTSYSTQEEAGIEG-LMAANETNLREMVLRKKGELMSAFQEASADGEG-VTLAQWEEIMTSVTGLMISWATLKTHLVPEPALKDD 552
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BLAST of mRNA_Ecto-sp9_F_contig9977.18039.1 vs.
Match: Serine/threonine-protein (phosphatase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YEZ5_9STRA)

HSP 1 Score: 157 bits (397), Expect = 3.860e-41
Identity = 95/201 (47.26%), Postives = 119/201 (59.20%), Query Frame = 1 
Query:   16 LRTIMHCALWSDPDLSPSLPNPQQNPRGAGVLFGPDSTKSFLEENGLDMVVRSHECVEEGFDLPFEEDMEGCCATIFSASNYGGSMNQGATMRFSLNETD-DSFAAGGMRATSPEVH---YTVFDY--QLTAADKDHGHLLKANQSGLSSLVLRKKRALTAAFTQVDKQGDGFVTKDKWCQVMDNVTGLQISWKAILNIIV 600
            L  +   ALWSDP +   +  P  NPRGAGV+FGP  T+ FL  N L MVVRSHECV EGFDLPF+++  G  ATIFSASNYG S N GA MRF+  +   +S  AG   A         YTV  Y  Q  A  +D   L+K+NQ+ L  LVLRKK  L AAF +V   G+  V+  +W +VM  VTGL I W  + + ++
Sbjct:  335 LSELNRDALWSDP-VQEDIREP--NPRGAGVIFGPSVTREFLSNNNLRMVVRSHECVREGFDLPFDDEDLGILATIFSASNYGNSANNGAFMRFTKGKRPPNSLLAGSADAADAPAEPLWYTVTSYSTQEGAGIED---LIKSNQTNLRELVLRKKSELIAAFQEVSSNGED-VSVQQWTEVMTKVTGLMIGWPLLKSHLI 528
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BLAST of mRNA_Ecto-sp9_F_contig9977.18039.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYC0_9STRA)

HSP 1 Score: 136 bits (343), Expect = 3.130e-35
Identity = 76/208 (36.54%), Postives = 111/208 (53.37%), Query Frame = 1 
Query:   25 IMHCALWSDPDLSPSLPNPQQNPRGAGVLFGPDSTKSFLEENGLDMVVRSHECVEEGFDLPFEEDMEGCCATIFSASNYGGSMNQGATMRFSLNETDDSF-AAGGMRATSPEVH---YTVFDYQLTAADKDHGHLLKANQSGLSSLVLRKKRALTAAFTQVDKQGDGFVTKDKWCQVMDNVTGLQISWKAILNIIVDEEDREGDKINW 636
            ++ C LWSDP     +    ++PRGAGV FGPD  K+FL+ N LDM+VRSHECV +G++ PFE   EG   TIFS SNY    N  + ++FSL + + ++  AG    +  + H   YTV +Y       +        +     LV+ K+  L  AF + D    G +T D+W   M   TGL I W+ ++ ++VD     G KI++
Sbjct:   30 LVRCMLWSDPTPEDGV---HESPRGAGVAFGPDILKAFLKNNNLDMMVRSHECVRDGWEQPFEGQDEGLVGTIFSTSNYCEWDNNASYLKFSLKKPEGAYKVAGEPDGSLTKAHPFYYTVNEYSAQNVRDNMLSSSSKTEFNFLDLVVHKRMELEDAFHKRDPDHTGKITLDEWETSMQEATGLMILWRPLIPMVVDSHAVHGCKIDY 234
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9977.18039.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUS7_9STRA)

HSP 1 Score: 119 bits (298), Expect = 6.370e-31
Identity = 54/93 (58.06%), Postives = 70/93 (75.27%), Query Frame = 1 
Query:    4 RQKDLRTIMHCALWSDPDLSPSLPNPQQNPRGAGVLFGPDSTKSFLEENGLDMVVRSHECVEEGFDLPFEEDMEGCCATIFSASNYGGSMNQG 282
            R  +L+T+M CALWSDPD    + +   NPRGAGVLFGPD  ++FL +N +DMVVRSHECV +G+D P+E++ +G   TIFSASNYGG+ N G
Sbjct:   39 RAFELKTLMRCALWSDPDSDFGVGH---NPRGAGVLFGPDVAQAFLSDNSMDMVVRSHECVRDGWDQPYEDEFQGLLGTIFSASNYGGAGNMG 128
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9977.18039.1 vs.
Match: Multifunctional (fusion protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3X1_9STRA)

HSP 1 Score: 120 bits (301), Expect = 8.480e-28
Identity = 75/224 (33.48%), Postives = 116/224 (51.79%), Query Frame = 1 
Query:   16 LRTIMHCALWSDPDLSPSLPNPQQNPRGAGVLFGPDSTKSFLEENGLDMVVRSHECVEEGFDLPFEEDM-EGCCATIFSASNYGGSMNQGATMRFSLNETDDSFAAGGMRATSP---------------------EVHYTVFDYQLTAADKDHGHLLKANQSGLSSLVLRKKRALTAAFTQVD--KQG--DGFVTKDKWCQVMDNVTGLQISWKAILNIIVDEE 609
            L  IM  ++WSDP  SP +     NPRG GVLFGPD T++FL +NGL M++RSHECV  GF+  F          T+FSASNY  + NQGA +RF        F+  G  AT P                      +HY+V  + +         L +  Q+ L ++VL+++ +L   F  V+  ++G  +G+VT  +W + M  V  +Q++W+ + +++V  +
Sbjct:  990 LHQIMRESMWSDPKKSPGI---TPNPRGEGVLFGPDVTEAFLRDNGLKMLIRSHECVPLGFEFSFLNGRGHHLLMTLFSASNYASAGNQGAFLRF--------FSMEGQPATHPFRTVHGLPSTPXXXXXXXXXXNLHYSVHSFFMGDPLGHEQSLTRTLQASLLTVVLKRRHSLLRHFQGVEAGREGGREGWVTVREWAEGMRAVCKVQVNWEGLRDLLVPRD 1202
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BLAST of mRNA_Ecto-sp9_F_contig9977.18039.1 vs.
Match: Serine/threonine-protein (phosphatase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZY84_9STRA)

HSP 1 Score: 119 bits (298), Expect = 2.100e-27
Identity = 66/199 (33.17%), Postives = 105/199 (52.76%), Query Frame = 1 
Query:   40 LWSDPDLSPSLPNPQQNPRGAGVLFGPDSTKSFLEENGLDMVVRSHECVEEGFDLPFEEDMEGCCATIFSASNYGGSMNQGATMRFSLNETDDSFAAGGMRATSPEVHYTVFDYQLTAADKDHGHLLKANQSGLSSLVLRKKRALTAAFTQVDKQGDGFVTKDKWCQVMDNVTGLQISWKAILNIIVDEEDREGDKINW 636
            LWSDP   P     +++ RGAG+ +GP+ TK FL+ N L+++VRSHECV  G++ P+ +  +G   TIFSASNY  S N GA M    + T                  T   Y+ T ++ D    +  N  GL S++L  + AL +AF  VDK   GFV+ ++W  +M++   + + W  +  ++   E+ +   +N+
Sbjct:  319 LWSDPYTEPQW---KESFRGAGIQYGPELTKEFLQVNNLELIVRSHECVPMGYEWPYGD--KGMVLTIFSASNYTRSQNAGAIMLIPADATQTP---------------TFLPYRATLSEHD---FVATNLDGLYSVILSNRAALKSAFEAVDKGATGFVSLNQWETIMESTLNMSLDWAVLQPLVTTAENNQVPYMNF 494
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9977.18039.1 vs.
Match: Serine/threonine-protein (phosphatase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U244_9STRA)

HSP 1 Score: 118 bits (295), Expect = 4.520e-27
Identity = 74/205 (36.10%), Postives = 107/205 (52.20%), Query Frame = 1 
Query:   40 LWSDPDLSPSLPNPQQNPRGAGVLFGPDSTKSFLEENGLDMVVRSHECVEEGFDLPFEEDMEG----CCATIFSASNYGGSMNQGATMRFSLNETDDSF------------AAGGMRATSPEVHYTVFDYQLTAADKDHGHLLKANQSGLSSLVLRKKRALTAAFTQVDKQGDGFVTKDKWCQVMDNVTGLQISWKAILNIIVDE 606
            LWSDP   P     +++ RG+G+L GPD    +L +NG DM+VRSHE V+ GFDLP+++        CCAT+FSAS+Y G  N+GA + F + E   S               G        ++YTV +Y  T  DK   +    N   L + +LRKK AL+ AF ++ K  DG VT +++   M  V  L++ W  ++  I  E
Sbjct:  369 LWSDPMKEPGQ---RKSKRGSGMLIGPDVCYKWLMKNGFDMLVRSHEAVQAGFDLPYKDSSTAHGHLCCATVFSASDYCGIGNKGAFLSFHVKEPGVSVHTEERQRGLELEPVGADTVKEASMYYTVVEY-YTGQDKPDMNAW--NGKTLGTRILRKKAALSRAFAEI-KGADGTVTLEQFSATMTTVMDLELHWVQVVPTIAPE 566
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9977.18039.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Serine/threonine-protein7.390e-14797.18phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
Serine/threonine-protein7.100e-8160.37phosphatase n=1 Tax=Tribonema minus TaxID=303371 R... [more]
Serine/threonine-protein4.660e-4844.86phosphatase n=1 Tax=Heterosigma akashiwo TaxID=282... [more]
Serine/threonine-protein1.220e-4145.41phosphatase n=2 Tax=Phaeomonas parva TaxID=124430 ... [more]
Serine/threonine-protein3.860e-4147.26phosphatase n=1 Tax=Pinguiococcus pyrenoidosus Tax... [more]
Hypothetical3.130e-3536.54protein n=1 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
Hypothetical6.370e-3158.06protein (Fragment) n=1 Tax=Fibrocapsa japonica Tax... [more]
Multifunctional8.480e-2833.48fusion protein n=1 Tax=Nannochloropsis salina CCMP... [more]
Serine/threonine-protein2.100e-2733.17phosphatase n=1 Tax=Thraustotheca clavata TaxID=74... [more]
Serine/threonine-protein4.520e-2736.10phosphatase n=1 Tax=Phaeomonas parva TaxID=124430 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9977contigEcto-sp9_F_contig9977:230..4349 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score114.8
Seed ortholog evalue4.8e-23
Seed eggNOG ortholog4792.ETI36681
KEGG koko:K13807
KEGG Pathwayko04745,map04745
EggNOG free text desc.PPP5 TPR repeat region
EggNOG OGs3Q8Z7@4776,COG0639@1,KOG0377@2759
EC3.1.3.16
COG Functional cat.T
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01009
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSerine/threonine protein phosphatase catalytic subunit
Ec32 orthologEc-08_001920.1
Exons5
Model size639
Cds size612
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9977.18039.1prot_Ecto-sp9_F_contig9977.18039.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig9977 257..4349 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931094.3109298-UTR-Ecto-sp9_F_contig9977:229..2561622931094.3109298-UTR-Ecto-sp9_F_contig9977:229..256Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig9977 230..256 +
1692279030.4930136-UTR-Ecto-sp9_F_contig9977:229..2561692279030.4930136-UTR-Ecto-sp9_F_contig9977:229..256Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig9977 230..256 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931094.3257575-CDS-Ecto-sp9_F_contig9977:256..4551622931094.3257575-CDS-Ecto-sp9_F_contig9977:256..455Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9977 257..455 +
1692279030.5134017-CDS-Ecto-sp9_F_contig9977:256..4551692279030.5134017-CDS-Ecto-sp9_F_contig9977:256..455Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9977 257..455 +
1622931094.3560522-CDS-Ecto-sp9_F_contig9977:1222..13371622931094.3560522-CDS-Ecto-sp9_F_contig9977:1222..1337Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9977 1223..1337 +
1692279030.5236926-CDS-Ecto-sp9_F_contig9977:1222..13371692279030.5236926-CDS-Ecto-sp9_F_contig9977:1222..1337Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9977 1223..1337 +
1622931094.3779488-CDS-Ecto-sp9_F_contig9977:2891..29821622931094.3779488-CDS-Ecto-sp9_F_contig9977:2891..2982Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9977 2892..2982 +
1692279030.5335329-CDS-Ecto-sp9_F_contig9977:2891..29821692279030.5335329-CDS-Ecto-sp9_F_contig9977:2891..2982Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9977 2892..2982 +
1622931094.3975477-CDS-Ecto-sp9_F_contig9977:3555..36751622931094.3975477-CDS-Ecto-sp9_F_contig9977:3555..3675Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9977 3556..3675 +
1692279030.544939-CDS-Ecto-sp9_F_contig9977:3555..36751692279030.544939-CDS-Ecto-sp9_F_contig9977:3555..3675Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9977 3556..3675 +
1622931094.4137561-CDS-Ecto-sp9_F_contig9977:4262..43491622931094.4137561-CDS-Ecto-sp9_F_contig9977:4262..4349Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9977 4263..4349 +
1692279030.5633695-CDS-Ecto-sp9_F_contig9977:4262..43491692279030.5633695-CDS-Ecto-sp9_F_contig9977:4262..4349Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9977 4263..4349 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig9977.18039.1

>prot_Ecto-sp9_F_contig9977.18039.1 ID=prot_Ecto-sp9_F_contig9977.18039.1|Name=mRNA_Ecto-sp9_F_contig9977.18039.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=204bp
MHCALWSDPDLSPSLPNPQQNPRGAGVLFGPDSTKSFLEENGLDMVVRSH
ECVEEGFDLPFEEDMEGCCATIFSASNYGGSMNQGATMRFSLNETDDSFA
AGGMRATSPEVHYTVFDYQLTAADKDHGHLLKANQSGLSSLVLRKKRALT
AAFTQVDKQGDGFVTKDKWCQVMDNVTGLQISWKAILNIIVDEEDREGDK
INWR
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mRNA from alignment at Ecto-sp9_F_contig9977:230..4349+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig9977.18039.1 ID=mRNA_Ecto-sp9_F_contig9977.18039.1|Name=mRNA_Ecto-sp9_F_contig9977.18039.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=4120bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9977:230..4349+ (Ectocarpus species9 EcSCA_722f female)
AGGCGTCAGAAGGACCTCCGCACCATCATGCACTGCGCCTTGTGGAGCGA
CCCAGACCTGTCGCCGAGCCTGCCCAACCCGCAGCAGAACCCACGAGGGG
CCGGGGTGTTGTTCGGCCCCGACTCGACCAAGTCTTTCCTTGAGGAGAAC
GGGCTGGACATGGTGGTGCGGAGCCACGAGTGTGTCGAGGAGGGCTTCGA
CCTGCCCTTCGAGGAGGACATGGAGGGTAAGGACAAACTTATATGGACTC
CTACCATATAACCTTGGTAGAAGAAAAAGCTGTGTTTATTCGTATTCGTG
AGAGGGTAAGACCAAACTTATACAGTAGTAGAAAAAAAGCTGAGTTTTGT
TCTTTGGGGGACAAGGAGAAAAACTGTGTTTGTTCGTTGGAGGGTAAGGC
CAAACTTGTACGTTGGTTAAAAGCGAAGGTGGTAGGTACATACGCGAGAA
GTTCGTTCGTGACCCCGGTCCGGTCGGTAGGGAAGCATTTTATGTTATTT
CTCTTACGTAAAGCGCTTTTCAATAACTCAATTCCGTTGCAGTTGGTTTT
GATCCGTCTACGACAACGAACTTATTTAGCTTCTTCCTTGTCTTTCCCTT
TTTTTTTCGCACGGTATTTCGGTTGTTTTGTGTTAAATTGTAACAGTTGT
GTGGCTTTATTGTAAAAAGTTGTGTGGCTTGTATTATTTATTTTTTTGCT
GTTTGCGCGACGCACAACGTTCTTCTCCGGCGCGGAGCTAACGTAATTGC
GTGTGCACGTATGCCCGATACCTCCGCACGGACATGCAAACCGAGCAAAA
CGCCCCGACTTGCGGTTACTACGTATCCACGTACCACGTGCTCATGATCC
TACAGTACTCGTGTAGAATCGACCACACCTTCTCTGATGATTCTTTGTCT
TCGTCCACGACGACCGCTCGCGTGTGCGTGTGTGTGCCTCTCGTACGCAT
ACATCCGTACGGCGGCGACCGGCGATGGCTTTGACGTTGGCAGGGTGCTG
CGCGACCATCTTTTCCGCCTCGAACTACGGCGGGAGCATGAACCAGGGGG
CCACGATGCGGTTCAGTCTCAACGAGACTGATGACAGCTTCGCCGCGGGG
GGGATGAGGTGAGGCATCCTCATGCGTTGATACCTCATTTCTTTTCTTTT
TTTTACGCAACCTCGTCGCTATTAATACAAGTCAGTGTTTAGGCTTGAAC
CTACTCAAATTAAGCTCAGTATCCAGCCGGTTTTCCTTCCATTCACTGAA
AAAAATTCAACCCGCCCCCTTCGAGTGTGGTATTATCTCGAAGGGGTAGT
TTTTGTCTGATTGTATCATATGTATTTTATATTTTGTACTAAAGTATGAA
CGAAACGAATTAATCTCTATCCATCGTGCTAGTATTTTATATTTTATACT
AAAGTATGAACGAAACGAATTAAGCTCTATCCATTGTGCTAGTATTTTAT
ATTTTATACTAAAGTATGAACGAAACGAATTCATCTCTATCCATTGTGCT
CGTATCATATGTGTTTTATATTTTATACTTAAGTATGAACGAAACGAATT
CATCTCTATCCATTGTGCTAGTATTTTATATTTTATACTTAAGTATGAAC
GCAACGAATTAATCTCTATCCTTGTGCTAGTCTCGTTATTTGTTCAGCTT
CTTTTTTTTTTTGTCGAACGTTGTCGTCACCGAGGAAAACATGAAGAACA
GCAATCCTGATGATATCTAAGTCAAACTTTTAGTTGTCATGTGAACGGCG
GTGTGTGTGTTGATGTATTGATGCGTGGCGTGTTTGTTGCTATTTCGCAG
TGTTGTCATTATAGTCGGCGTCGTCGCCGCAGGCGGCGTGTGTCGCGCCG
TTTTTGTCGGTGGTGGTGTTGACATACATGGTGGTGTTGACATAGCCTCT
CTCGCGTGTCTTGGCGAGTGACGCGTCTAGTCTACACATCACCAGTCAAG
TTCGTTGGCGGAGTTTCCCCGAACGATACAATAGGCTGGGACGCGTGCGA
TTCGACCGAGGATGGAAACACCAGCGCTATGATACGACCTTTTGTAAGGC
TGCGGTCGCCCTGTTGTTCTCTTGTGGTAAATAGTTCATAGTTCCACCGT
TCATGATGGACAAATCGAGGTAGGTCCCTCCAGCGGCTACCTGGTGAGCT
CCGCATTCCTGTATGCATACATTCTGGAACGCAACGCATGAACTCAACCC
TTGAGCTCGTACATGCAGGCCTACCTGCAGCGGGTCAGTTGATCCCGGTC
GACCTATGTTGTATAGCACCTGAATTTCAAGGTGCTCAAGTCACGATGAC
TTCTTTTTTTTTTTCTGGCTTGGATCTTCTCTCATGTAAAGTACAGCGCC
TCAAATTCTCACGGCAAGATTTAATTTCATTTTTTTTTGCTTGAATTCTT
GTTCAGGGCTACGTCCCCTGAGGTGCACTACACCAAGCAGGAGTACCAGC
TGTTGATGTCGATGTACAGCACCTGAAACTTGAAGGTTCTGACGTCAGAG
CATTCTTGGTTGTACTTTTTTTTTTTTTGTTCAGGGCCACGTCCCCGGAG
GTGCACTACACCATGCAGGAGTACCAGCTGTTGATGTCGATGTACAGCAC
CTAAACTTGAAGGCTCTGACGTCACCATGTCTTGGTTGCATTTTTTTTTT
CTTTTTGTTCAGGGCCACGTCCCCGGAGGTGCACTACACCGTGTTCGACT
ACCAGCTCACGGCTGCCGACAAGGACCACGGCCATCTGCTCAAGGCCAAC
CAGGTTAGTCGATTTAGATGAAAACGTATCATCGTGGAACGTCTGGCAAA
GGACTGGTTGTAGTCTTACATATCTCTTTTCGTTTTCTATGCGGAGTACC
ACTATGTTTCTGATTTTTTGTGGTTTTGGCAAGGCATGGTGTGTAGTCGT
TTTGCCATGGCCACGAACATGTTTGTATTCCCCCGAGACCCTCAGCAGCA
CCTAACCTTACGGTGCCTATGAAACCGTAAGTTAAGGGAGAGCACCCTCA
CCCCGATCCCCCGACACTACATGTAGCGGGGACAGATCCTCTGAGCTCCC
CCCGATCGAGTTCTTTTTGTTGAGGGTGAGTTCTTTCTGCTTCCTTGTTA
ACCCACACCACAGTTACTGCTTGGGATTTGGGCCGGAGACTGGCCGCGCC
CCCGCCCGCCAAGTGTGTTTCTAAATCGAAATGTGTTGGTTATTATTCTG
GAACAGAGTGGAAGAAAATTTTGTCGATCTACGGTAGATCGCAAAAAAAA
ACGCCTTTTTCCGGCGCACAAGCCTTACGTGTGCTCGGCGTCTTTTTTTT
GTTTGTTTTGTCACGTGTGACGTCAGAGCGGCCTGTCATCCCTGGTGCTC
CGGAAGAAGCGAGCGCTTACGGCCGCCTTTACCCAGGTGGACAAGCAGGG
GGACGGCTTCGTCACCAAGGACAAGTGGTGCCAGGTCATGGACAACGTGA
GTCCCTTGCATCGGCTTTGGGTATCATGTATCTATCATGAGGGCTGTCTT
GTCGTCGTTGGCTGCTCGTATGTAGTACTAAGTTATTGTAGTATCACCAG
GTCGTGGTCGGCGTGAGTCGTCAGTGATCGTTTTTTTCTGTGTTGTTGCT
GCTGTAACATGGTGGGCGTGGGTCGTGAGTGGCTGTGACTTTGGGTGTTT
TAGCTGTTGCTGATGTGACCAGGTCATTGGTCGACGTGGGTGGTGAGTGG
CTGTGGGTTTAGGCGTTCTAGTTGTTGCTGATGTGACCATAATAGGTCAT
TGGTCGGCGTGAGTCGCGAGTGGACGCGCGTGGATCTTGTATTATACCGA
AGAAAGTAGTTTTCATTCAGCCCATGGGCAACATCGGGTAGGTTTGTATA
TTTTTTGTCGTGAGCGCGCAGGTCATGAATGAACTGCCCGTTTGGGCGGT
GTCTGTGTCTATCTCGTGTGTAGAGCTGTCAGGCCCGTATTATATTTAGT
GTGTTGCCGTCGCTTTTTGGTGGACTCAACTCTTTGTGCGTGTGTGGTTT
GTGTTTGGTCTATTGTTGTTGATGTTGTTGCAGGTGACGGGTTTGCAGAT
CTCCTGGAAGGCGATCTTGAATATCATCGTCGATGAGGAAGACCGCGAAG
GGGACAAGATTAACTGGAGG
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig9977:230..4349+

>mRNA_Ecto-sp9_F_contig9977.18039.1 ID=mRNA_Ecto-sp9_F_contig9977.18039.1|Name=mRNA_Ecto-sp9_F_contig9977.18039.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1224bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9977:230..4349+ (Ectocarpus species9 EcSCA_722f female)
ATGCACTGCGCCTTGTGGAGCGACCCAGACCTGTCGCCGAGCCTGCCCAA
CCCGCAGCAGAACCCACGAGGGGCCGGGGTGTTGTTCGGCCCCGACTCGA
CCAAGTCTTTCCTTGAGGAGAACGGGCTGGACATGGTGGTGCGGAGCCAC
GAGTGTGTCGAGGAGGGCTTCGACCTGCCCTTCGAGGAGGACATGGAGGA
TGCACTGCGCCTTGTGGAGCGACCCAGACCTGTCGCCGAGCCTGCCCAAC
CCGCAGCAGAACCCACGAGGGGCCGGGGTGTTGTTCGGCCCCGACTCGAC
CAAGTCTTTCCTTGAGGAGAACGGGCTGGACATGGTGGTGCGGAGCCACG
AGTGTGTCGAGGAGGGCTTCGACCTGCCCTTCGAGGAGGACATGGAGGGG
TGCTGCGCGACCATCTTTTCCGCCTCGAACTACGGCGGGAGCATGAACCA
GGGGGCCACGATGCGGTTCAGTCTCAACGAGACTGATGACAGCTTCGCCG
CGGGGGGGATGAGGGTGCTGCGCGACCATCTTTTCCGCCTCGAACTACGG
CGGGAGCATGAACCAGGGGGCCACGATGCGGTTCAGTCTCAACGAGACTG
ATGACAGCTTCGCCGCGGGGGGGATGAGGGCCACGTCCCCGGAGGTGCAC
TACACCGTGTTCGACTACCAGCTCACGGCTGCCGACAAGGACCACGGCCA
TCTGCTCAAGGCCAACCAGGGCCACGTCCCCGGAGGTGCACTACACCGTG
TTCGACTACCAGCTCACGGCTGCCGACAAGGACCACGGCCATCTGCTCAA
GGCCAACCAGAGCGGCCTGTCATCCCTGGTGCTCCGGAAGAAGCGAGCGC
TTACGGCCGCCTTTACCCAGGTGGACAAGCAGGGGGACGGCTTCGTCACC
AAGGACAAGTGGTGCCAGGTCATGGACAACAGCGGCCTGTCATCCCTGGT
GCTCCGGAAGAAGCGAGCGCTTACGGCCGCCTTTACCCAGGTGGACAAGC
AGGGGGACGGCTTCGTCACCAAGGACAAGTGGTGCCAGGTCATGGACAAC
GTGACGGGTTTGCAGATCTCCTGGAAGGCGATCTTGAATATCATCGTCGA
TGAGGAAGACCGCGAAGGGGACAAGATTAACTGGAGGGTGACGGGTTTGC
AGATCTCCTGGAAGGCGATCTTGAATATCATCGTCGATGAGGAAGACCGC
GAAGGGGACAAGATTAACTGGAGG
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