mRNA_Ecto-sp9_F_contig9756.17855.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig9756.17855.1 vs.
Match: NB-ARC (and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI) HSP 1 Score: 524 bits (1349), Expect = 5.170e-173 Identity = 275/313 (87.86%), Postives = 294/313 (93.93%), Query Frame = 1
Query: 28 LENMRPPSLPDMAAVPAGALDLPHSSYVERAAVQEVADGLTSPKEPLSPFTVVGMGGGGKSVLASAVVRKPSVREHFRGGMFWVRVGRGAKSSLLPLLQGVAREMGAAPTDAPLGVPHVLDSLEQVQKHLAAVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDRSVVGMLAGRFELGDMTEE*ALELLRKTSGTVGQPGDDVRMKMTKVVALCGHLPLVLAVAGSMSAVKGKGLSAVAWEELAKELENVAKKMRARGQQSSSIKVVLETSFDSLAARKQEEFLKMAVLAAGALAPIEMLGNLWEIE 966
L ++ PPSLPDMAAVP GAL+LP SSYVERAAVQEVADGLT+P+E +P+TVVGMGGGGKSVLASA VRKPSVREHFRGG+FWVRVGRGAKSSLL LLQG+A ++GAAPTDAP GVPHVLD LEQVQ+HLAAVASTGTSPRLVVLDDVWEREVVDA VPLGFKVLLTTRDRSVVG+ AGR ELGDMTEE ALELLRKTSGTVGQPGDDVR KMTKVVALCGHLPLVLA+AGSMS V+GKGL+AVAWEELAKELENVAKKMRARG+QSSS+KVVLETSFDSLA RKQEEFLKMAVLAAGALAPIEML NLWE+E
Sbjct: 248 LPSLLPPSLPDMAAVPTGALELPSSSYVERAAVQEVADGLTTPEESRAPYTVVGMGGGGKSVLASAAVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAWDVGAAPTDAPHGVPHVLDRLEQVQQHLAAVASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGLPAGRLELGDMTEEEALELLRKTSGTVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSSMKVVLETSFDSLAVRKQEEFLKMAVLAAGALAPIEMLRNLWEVE 560
BLAST of mRNA_Ecto-sp9_F_contig9756.17855.1 vs.
Match: NB-ARC (and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G720_ECTSI) HSP 1 Score: 520 bits (1339), Expect = 4.080e-169 Identity = 274/313 (87.54%), Postives = 294/313 (93.93%), Query Frame = 1
Query: 28 LENMRPPSLPDMAAVPAGALDLPHSSYVERAAVQEVADGLTSPKEPLSPFTVVGMGGGGKSVLASAVVRKPSVREHFRGGMFWVRVGRGAKSSLLPLLQGVAREMGAAPTDAPLGVPHVLDSLEQVQKHLAAVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDRSVVGMLAGRFELGDMTEE*ALELLRKTSGTVGQPGDDVRMKMTKVVALCGHLPLVLAVAGSMSAVKGKGLSAVAWEELAKELENVAKKMRARGQQSSSIKVVLETSFDSLAARKQEEFLKMAVLAAGALAPIEMLGNLWEIE 966
L ++ PPSLPDMAAVPAGAL+LP SSYVERAAVQEVADGLT+P+E +P+TVVGMGGGGKSVLASAVVRKPSVREHFRGG+FWVRVGRGAKSSLL LLQG+AR++GAAPTDAP GVP VLDSLEQV++HLAAV STGTS RLVVLDDVWEREVVDA VPLGFKVLLTTRDRSVVG+ AGR ELGD+TEE ALELLRKTSG VGQPGDDVR KMTKVVALCGHLPLVLA+AGSMS V+GKGL+AVAWEELAKELENVAKKMRARG+QSSS+KVVLETSFDSLA RKQEEFLKMAVLAAGALAPIEML NLWEIE
Sbjct: 231 LPSLLPPSLPDMAAVPAGALELPSSSYVERAAVQEVADGLTAPEESRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLARDVGAAPTDAPCGVPRVLDSLEQVRQHLAAVTSTGTSQRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLELGDVTEEEALELLRKTSGAVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSSMKVVLETSFDSLAVRKQEEFLKMAVLAAGALAPIEMLRNLWEIE 543
BLAST of mRNA_Ecto-sp9_F_contig9756.17855.1 vs.
Match: NB-ARC (and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD7_ECTSI) HSP 1 Score: 514 bits (1323), Expect = 5.780e-168 Identity = 273/322 (84.78%), Postives = 295/322 (91.61%), Query Frame = 1
Query: 1 INAEALKIVLENMRPPSLPDMAAVPAGALDLPHSSYVERAAVQEVADGLTSPKEPLSPFTVVGMGGGGKSVLASAVVRKPSVREHFRGGMFWVRVGRGAKSSLLPLLQGVAREMGAAPTDAPLGVPHVLDSLEQVQKHLAAVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDRSVVGMLAGRFELGDMTEE*ALELLRKTSGTVGQPGDDVRMKMTKVVALCGHLPLVLAVAGSMSAVKGKGLSAVAWEELAKELENVAKKMRARGQQSSSIKVVLETSFDSLAARKQEEFLKMAVLAAGALAPIEMLGNLWEIE 966
++A A K + ++ PPSLPDMA VP GAL+LPHSSYVERAAVQEVADGLT+P+EP +P+TVVG+GGGGKSVLASAVVR PSVREHFRGG+ WVRVGRGAK+SLLPLLQG+ARE+GAAPTDAP GVPH LDSLEQVQ+HLAAVAST SPRLVVLDDVWEREVVDA VPLGFK+LLTTRDRS+V AGR ELGDMTEE ALELLRKTSGTV PGDDVRMKMTKVVALCGHLPLVLA+AGSMSAVKGKGL+AVAWEELAKE ENVAKKMRARGQQSSSIKVVLET+FDSLA RKQ+EFL MAVLAAGALAPIEML NLWEIE
Sbjct: 24 VDAIAAKRIFTDILPPSLPDMAEVPVGALELPHSSYVERAAVQEVADGLTNPEEPRTPYTVVGIGGGGKSVLASAVVRMPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREVGAAPTDAPHGVPHALDSLEQVQQHLAAVASTRNSPRLVVLDDVWEREVVDAFVPLGFKLLLTTRDRSIVCDPAGRLELGDMTEEEALELLRKTSGTV-DPGDDVRMKMTKVVALCGHLPLVLAIAGSMSAVKGKGLTAVAWEELAKEFENVAKKMRARGQQSSSIKVVLETTFDSLATRKQKEFLMMAVLAAGALAPIEMLSNLWEIE 344
BLAST of mRNA_Ecto-sp9_F_contig9756.17855.1 vs.
Match: NB-ARC (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE) HSP 1 Score: 491 bits (1265), Expect = 1.690e-167 Identity = 269/342 (78.65%), Postives = 289/342 (84.50%), Query Frame = 1
Query: 28 LENMRPPSLPDMAAVPAGALDLPHSSYVERAAVQEVADGLTSPKEPLSPFTVVGMGGGGKSVLASAVVRKPSVREHFRGGMFWVRVGRGAKSSLLPLLQGVAREMGAAPTDAPLGVPHVLDSLEQVQKHLAAVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDRSVVGMLAGRFELGDMTEE*ALELLRKTSGTVGQPGDDVRMKMTKVVALCGHLPLVLAVAGSMSAVKGKGLSAVAWEELAKELENVAKKMRARGQQSSSIKVVLETSFDSLAARKQEEFLKMAVLAAG-----------------------------ALAPIEMLGNLWEIE 966
L ++ PPSLPDMAAVPAGAL+LP SSYVERAAVQEVADGLTSP++P +P+TVVGMGGGGKSVLASAVVRKPSVREHFRGG+FWVRVGRGAKSSLL LLQG+AREMGAA TDAP VPHVLD LEQV++HLAAVASTGT PRLVVLDDVWEREVVDA VPLGFKVLLTTRDRSVV + AGR E+GDMTEE ALELLRK+SG VGQPGDDVR KMTKVVALCGHLPLVLA+AGSMS VKGKGL+AVAW+ELA+ LENVAKKMRARG+QSSSI VLETSFDSLA RKQEEFLK+AVLAA ALAPIEML NLWEIE
Sbjct: 194 LPSLLPPSLPDMAAVPAGALELPCSSYVERAAVQEVADGLTSPEDPRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAREMGAARTDAPHTVPHVLDGLEQVKQHLAAVASTGTFPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVVVPAGRLEVGDMTEEEALELLRKSSGAVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVKGKGLTAVAWKELAENLENVAKKMRARGEQSSSINAVLETSFDSLAVRKQEEFLKLAVLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAPIEMLRNLWEIE 535
BLAST of mRNA_Ecto-sp9_F_contig9756.17855.1 vs.
Match: NB-ARC (and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG5_ECTSI) HSP 1 Score: 501 bits (1290), Expect = 4.160e-159 Identity = 271/314 (86.31%), Postives = 290/314 (92.36%), Query Frame = 1
Query: 28 LENMRPPSLPDMAAVPAGALDLPHSSYVERAAVQEVADGLTSPKEPLSPFTVVGMGGGGKSVLASAVVRKPSVREHFRGGMFWVRVGRGAKSSLLPLLQGVAREMGAAPTDAPLGVPHVLDSLEQVQKHLAAV-ASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDRSVVGMLAGRFELGDMTEE*ALELLRKTSGTVGQPGDDVRMKMTKVVALCGHLPLVLAVAGSMSAVKGKGLSAVAWEELAKELENVAKKMRARGQQSSSIKVVLETSFDSLAARKQEEFLKMAVLAAGALAPIEMLGNLWEIE 966
L ++RPP L DMAAVPAGALDLP YVERAAVQEVADGLT+P+EP +P+TVVG+GGGGKSVLASAVVRKPSVREHFRGG+ WVRVGRGAK+SLLPLLQG+AREMG APTDAP VP VLDSLEQVQ+HLAAV ASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRD SVV + A R +LGDMTEE ALELLRKTSGTVGQPGD VRMKMTKVVALCGHLPLVLA+AGSMSAVKGKGL+AVAWEELAK ENVAKKMRARGQQSS+IKVVLETSFDSLA +KQEEFL+M+VLAAGALAPIEML NLWEIE
Sbjct: 206 LPSLRPPRLLDMAAVPAGALDLPRG-YVERAAVQEVADGLTAPEEPRAPYTVVGLGGGGKSVLASAVVRKPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREMGVAPTDAPHAVPQVLDSLEQVQQHLAAVVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDWSVVVVPARRLDLGDMTEEEALELLRKTSGTVGQPGDYVRMKMTKVVALCGHLPLVLAIAGSMSAVKGKGLTAVAWEELAKSFENVAKKMRARGQQSSAIKVVLETSFDSLAVQKQEEFLRMSVLAAGALAPIEMLRNLWEIE 518
BLAST of mRNA_Ecto-sp9_F_contig9756.17855.1 vs.
Match: NB-ARC (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJA6_9PHAE) HSP 1 Score: 456 bits (1172), Expect = 1.700e-155 Identity = 244/302 (80.79%), Postives = 266/302 (88.08%), Query Frame = 1
Query: 61 MAAVPAGALDLPHSSYVERAAVQEVADGLTSPKEPLSPFTVVGMGGGGKSVLASAVVRKPSVREHFRGGMFWVRVGRGAKSSLLPLLQGVAREMGAAPTDAPLGVPHVLDSLEQVQKHLAAVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDRSVVGMLAGRFELGDMTEE*ALELLRKTSGTVGQPGDDVRMKMTKVVALCGHLPLVLAVAGSMSAVKGKGLSAVAWEELAKELENVAKKMRARGQQSSSIKVVLETSFDSLAARKQEEFLKMAVLAAGALAPIEMLGNLWEIE 966
MAAVPAGAL LP S YVERAAVQEVADGL P+EP +P+ VVGMGGGGK++L SAVVRK +VREHFRGG+FW+RVGR AK+SLL LLQG+AREM AAPTD P GVPHVL+SLEQV++HLA VAS GTSPRLVVLDDVWEREVVDAL+ LG KVL+TTRDRSVVG+ G ELGDMTEE ALELL KTS TVGQPG +VR +MTKVV LCGHLPLVLA+AGSMS VKGKGL+AVAWEEL KE ENVAKKMR RG+QSSSIKVVL TSFD+LAARKQEE LKM VLAAGALAPIEML NLWEIE
Sbjct: 1 MAAVPAGALTLPQS-YVERAAVQEVADGLIKPEEPRAPYAVVGMGGGGKTMLVSAVVRKSNVREHFRGGVFWMRVGRHAKNSLLSLLQGLAREMSAAPTDTPHGVPHVLESLEQVKQHLATVASAGTSPRLVVLDDVWEREVVDALLSLGLKVLVTTRDRSVVGVSGGLLELGDMTEEEALELLLKTSRTVGQPGHEVRTQMTKVVVLCGHLPLVLAIAGSMSVVKGKGLTAVAWEELIKEFENVAKKMRVRGEQSSSIKVVLGTSFDALAARKQEESLKMTVLAAGALAPIEMLRNLWEIE 301
BLAST of mRNA_Ecto-sp9_F_contig9756.17855.1 vs.
Match: NB-ARC (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU94_9PHAE) HSP 1 Score: 427 bits (1097), Expect = 1.590e-137 Identity = 230/322 (71.43%), Postives = 262/322 (81.37%), Query Frame = 1
Query: 1 INAEALKIVLENMRPPSLPDMAAVPAGALDLPHSSYVERAAVQEVADGLTSPKEPLSPFTVVGMGGGGKSVLASAVVRKPSVREHFRGGMFWVRVGRGAKSSLLPLLQGVAREMGAAPTDAPLGVPHVLDSLEQVQKHLAAVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDRSVVGMLAGRFELGDMTEE*ALELLRKTSGTVGQPGDDVRMKMTKVVALCGHLPLVLAVAGSMSAVKGKGLSAVAWEELAKELENVAKKMRARGQQSSSIKVVLETSFDSLAARKQEEFLKMAVLAAGALAPIEMLGNLWEIE 966
++A + K + PPSLPDMA VPA A+ L S YVERAAV++VADG+T+P+EP +P+TV GMGGGGKSVLASAVVRK SVREHFRGG+FW+ VGRGAK LLPLLQG+ +MGAAPTD P GVPHVLDSLEQVQ+HL AVASTGTSPRLVVLDDVWEREVVDAL+PLGFKVL+TTRDRSVVG+ ELGDMTEE ALELL KTSGTVG+PGD VR MTKVV LCG LPLVLA+AGS+ VKGKGL+A AW +L ELENV KM A + S+S+ VVLETSFD+L RK++ F K AVLA GA+A EML NLWE E
Sbjct: 116 LDAISAKGATGTVLPPSLPDMAKVPAEAVALSDSLYVERAAVRKVADGITNPEEPRAPYTVFGMGGGGKSVLASAVVRKSSVREHFRGGIFWLTVGRGAKKRLLPLLQGLTGDMGAAPTDTPHGVPHVLDSLEQVQRHLGAVASTGTSPRLVVLDDVWEREVVDALLPLGFKVLVTTRDRSVVGVPTRCLELGDMTEEEALELLLKTSGTVGRPGDSVRTVMTKVVTLCGRLPLVLAIAGSLPVVKGKGLTAGAWGKLIDELENVVTKMEASLEDSNSLNVVLETSFDALTFRKKQAFKKTAVLAPGAVASTEMLLNLWETE 437
BLAST of mRNA_Ecto-sp9_F_contig9756.17855.1 vs.
Match: NB-ARC (and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPV9_ECTSI) HSP 1 Score: 394 bits (1012), Expect = 7.080e-125 Identity = 211/319 (66.14%), Postives = 250/319 (78.37%), Query Frame = 1
Query: 10 EALKIVLENMRPPSLPDMAAVPAGALDLPHSSYVERAAVQEVADGLTSPKEPLSPFTVVGMGGGGKSVLASAVVRKPSVREHFRGGMFWVRVGRGAKSSLLPLLQGVAREMGAAPTDAPLGVPHVLDSLEQVQKHLAAVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDRSVVGMLAGRFELGDMTEE*ALELLRKTSGTVGQPGDDVRMKMTKVVALCGHLPLVLAVAGSMSAVKGKGLSAVAWEELAKELENVAKKMRARGQQSSSIKVVLETSFDSLAARKQEEFLKMAVLAAGALAPIEMLGNLWEIE 966
+A ++ ++ PP+LP AAVP GAL LP S YVER VQE L P++ L+P+ +VGMGGGGK+VLASA+VRK SV EHFRGG+FW+ +GRGA SLL LQG+AREMGAAPTDAP GVPHV DSLEQV +HLAAV S G+SPRLVVLDDVWEREVV A + +G KVL+TTRDRS+VG+ G ELGDM E+ ALELL KTSGTVGQPGD VR +MTKVV CG LPLVLA+AGSM VKGKGL AWEEL +E ENV M G++S ++ +VL SF++LAARK+EEFL+MAVLA GA+AP EML NLWEI+
Sbjct: 220 KAFSTMIRDVLPPTLPQRAAVPTGALALPRS-YVERPGVQEAMGDLMDPEKALAPYMIVGMGGGGKTVLASALVRKSSVLEHFRGGIFWMEMGRGANKSLLHRLQGLAREMGAAPTDAPHGVPHVFDSLEQVMQHLAAVVSRGSSPRLVVLDDVWEREVVAAFLGVGLKVLVTTRDRSIVGVPGGLLELGDMAEDEALELLWKTSGTVGQPGDGVRTQMTKVVDRCGRLPLVLAIAGSMPVVKGKGLKDGAWEELIEEFENVTTIMWEPGEESRNLDMVLGASFNALAARKREEFLRMAVLAPGAVAPFEMLRNLWEIQ 537
BLAST of mRNA_Ecto-sp9_F_contig9756.17855.1 vs.
Match: NB-ARC (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQU6_9PHAE) HSP 1 Score: 286 bits (732), Expect = 1.760e-87 Identity = 172/307 (56.03%), Postives = 213/307 (69.38%), Query Frame = 1
Query: 49 SLPDMAAVPAGALDLPHSSYVERAAVQEVADGLTSPKEPLSPFTVVGMGGGGKSVLASAVVRKPSVREHFRGGMFWVRVGRGAKSSLLPLLQGVAREMGAAPTDAPLGVPHVLDSLEQVQKHLAAVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDRSVVGMLAGRFELGDMTEE*ALELLRKTSGTVGQPGDDVRMKMTKVVALCGHLPLVLAVAGSMSAVKGKGLSAVAWEELAKEL-ENVAKKMRARGQQSSSIKVVLETSFDSLAARKQEEFLKMAVLAAGALAPIEMLGNLWEIE 966
SL + AAVPAGA LPH YV R+ V++ +GL + +EP +PF VVGM G GK+VL SAVVR VREHF GG+FW+RVGRGAK+SLLPL+Q +AREMGA GVP+VLD LEQV +H+AAVASTGTSPRLVVLDDVWEREVVDAL+ L KVL+TTRD SVVG+ R E DM E+ A+ELL KTS P + K+ K G LA + + +A AW+E+ K L EN+A+ +R RG Q S+ VVLE+SFD+LA RKQEE + M V+A ++AP EML NLWE++
Sbjct: 89 SLSNRAAVPAGAHGLPHY-YVARSVVRKAVEGLINAEEPSAPFVVVGMSGAGKTVLVSAVVRHLRVREHFHGGIFWMRVGRGAKTSLLPLMQTLAREMGAH------GVPYVLDGLEQVGQHVAAVASTGTSPRLVVLDDVWEREVVDALLRLKLKVLVTTRDHSVVGVPGTRLEPEDMAEDEAMELLLKTS----VPKNKALEKLIKAAMTVGRPANFLAQMTKVREIM-TAAAAAAWDEMVKLLNENMARFLRLRGDQLPSLNVVLESSFDALAIRKQEEPIMMVVIAPRSIAPREMLENLWELQ 383
BLAST of mRNA_Ecto-sp9_F_contig9756.17855.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW28_9PHAE) HSP 1 Score: 240 bits (613), Expect = 6.480e-73 Identity = 162/306 (52.94%), Postives = 186/306 (60.78%), Query Frame = 1
Query: 43 PPSLPDMAAVPAGALDLPHSSYVERAAVQEVADGLTSPKEPLSPFTVVGMGGGGKSVLASAVVRKPSVREHFRGGMFWVRVGRGAKSSLLPLLQGVAREMGAAPTDAPLGVPHVLDSLEQVQKHLAAVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDRSVVGMLAGRFELGDMTEE*ALELLRKTSGTVGQPGDDVRMKMTKVVALCGHLPLVLAVAGSMSAVKGKGLSAVAWEELAKELENVAKKMRARGQQSSSIKVVLETSFDSLAARKQEEFLKMAVLAAGALAPIEMLGNLWE 960
PPSLPDMAAVPAGAL LPHS YVERAAVQEVADGLT+P+EP +P++ VGMGGGGKSVLASAVVRK SV +HFRGG W LG P SPRLVVLDDVWE EVVDAL+PLG KVL+TT DRSV+G+ +G E+GDMTE ALELLRKTS TVG+ T V G + + KGL+A AW +L ELE+VA KM A + S S+ VVLETSF++L K+ EF K AVLA GA+ EML NLWE
Sbjct: 160 PPSLPDMAAVPAGALALPHS-YVERAAVQEVADGLTNPEEPRAPYSAVGMGGGGKSVLASAVVRKSSVTQHFRGGR-WA-----------------------------LGHPRA-------------------SPRLVVLDDVWEPEVVDALLPLGLKVLVTTIDRSVLGVSSGCVEVGDMTEGEALELLRKTSRTVGRCA-----LWTSTVGARDR--------GFHARRERKGLTAGAWGKLI-ELEDVATKMEASDEDSDSLNVVLETSFNALTLTKKREFKKSAVLAPGAVVSTEMLLNLWE 401 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9756.17855.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig9756.17855.1 >prot_Ecto-sp9_F_contig9756.17855.1 ID=prot_Ecto-sp9_F_contig9756.17855.1|Name=mRNA_Ecto-sp9_F_contig9756.17855.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=187bp MRPPSLPDMAAVPAGALDLPHSSYVERAAVQEVADGLTSPKEPLSPFTVVback to top mRNA from alignment at Ecto-sp9_F_contig9756:2405..3889- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig9756.17855.1 ID=mRNA_Ecto-sp9_F_contig9756.17855.1|Name=mRNA_Ecto-sp9_F_contig9756.17855.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=1485bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9756:2405..3889- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig9756:2405..3889- >mRNA_Ecto-sp9_F_contig9756.17855.1 ID=mRNA_Ecto-sp9_F_contig9756.17855.1|Name=mRNA_Ecto-sp9_F_contig9756.17855.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1122bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9756:2405..3889- (Ectocarpus species9 EcSCA_722f female)back to top |