mRNA_Ecto-sp9_F_contig9564.17683.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig9564.17683.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE1_ECTSI) HSP 1 Score: 239 bits (611), Expect = 2.020e-77 Identity = 115/121 (95.04%), Postives = 117/121 (96.69%), Query Frame = 1
Query: 124 MGWRLTHDELYNRNGQGVIETAAGPIHFERGQGQQGRAWDCSLVLAKYLDQRPEEVRGKRVLELGCGVGLPGVAAAVVGATEVILTDMGYGNAYCPTSVTTPVTVKSMGEHHSNRKKRRFL 486
MGWRL HDELYNRNGQGVIETAAGPIHFERGQGQQGRAWDCSLVLAKYL+QRPEEVRGKRVLELGCGVGLPGVAAAVVGATEVILTDMGYGNA CPTSVTTPVTVKSMG+HHSNRKK FL
Sbjct: 1 MGWRLAHDELYNRNGQGVIETAAGPIHFERGQGQQGRAWDCSLVLAKYLEQRPEEVRGKRVLELGCGVGLPGVAAAVVGATEVILTDMGYGNADCPTSVTTPVTVKSMGKHHSNRKKEAFL 121
BLAST of mRNA_Ecto-sp9_F_contig9564.17683.1 vs.
Match: Uncharacterized (protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H380_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 1.920e-16 Identity = 42/102 (41.18%), Postives = 64/102 (62.75%), Query Frame = 1
Query: 94 ATAFAARRREMGWRLTHDELYNRNGQGVIETAAGPIHFERGQGQQGRAWDCSLVLAKYLDQR----PEEVRGKRVLELGCGVGLPGVAAAVVGATEVILTDM 387
A A+A W L+H + +G + TA +HF+ GQQ R WDC+LV++K+L P GK+++ELGCG+G+PG++AA++GA +V+LTDM
Sbjct: 36 AQAYADNIAARSWGLSHRDKAGLSGGQLALTADVTVHFQEELGQQRRVWDCALVVSKFLANPLYFPPGSFNGKQIIELGCGIGVPGLSAALLGAKQVVLTDM 137
BLAST of mRNA_Ecto-sp9_F_contig9564.17683.1 vs.
Match: Aste57867_17165 (protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L749_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 7.590e-16 Identity = 43/120 (35.83%), Postives = 72/120 (60.00%), Query Frame = 1
Query: 76 EERLREATAFAARRREMGWRLTHDELYNRNGQGVIETAAGPIHFERGQGQQGRAWDCSLVLAKYLDQ----RPEEVRGKRVLELGCGVGLPGVAAAVVGATEVILTDMGYGNAYCPTSVT 423
+E+L++A+++A W L+H + + + T + F+ GQQ R WDC+LVL+K+L P+ GK V+ELGCG+G+PG++AA++GA +V+LTDM + ++T
Sbjct: 30 DEKLKKASSYAENIAARTWGLSHRDKAGLSEGSLALTQDVSVLFQEELGQQRRVWDCALVLSKFLTHPDYFAPDFFHGKHVIELGCGIGVPGLSAALLGAKQVLLTDMAIAVPWIQVNIT 149
BLAST of mRNA_Ecto-sp9_F_contig9564.17683.1 vs.
Match: Uncharacterized (protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YD64_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 8.660e-16 Identity = 45/116 (38.79%), Postives = 65/116 (56.03%), Query Frame = 1
Query: 94 ATAFAARRREMGWRLTHDELYNRNGQGVIETAAGPIHFERGQGQQGRAWDCSLVLAKYLDQ------------------RPEEVRGKRVLELGCGVGLPGVAAAVVGATEVILTDM 387
A A+A W L+H + + TAA +HF+ GQQ R WDC+LVL+K+L + + GKRV+ELGCG+G+PG++AA++GA+EV+LTDM
Sbjct: 36 AAAYADDIASRAWGLSHRDRAGLASGALPLTAAATVHFQEELGQQRRVWDCALVLSKFLTNSAYFSSVQFSAIAIVHSGKQDFFAGKRVIELGCGIGVPGLSAALLGASEVVLTDM 151
BLAST of mRNA_Ecto-sp9_F_contig9564.17683.1 vs.
Match: Uncharacterized (protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3LU63_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 6.050e-15 Identity = 51/135 (37.78%), Postives = 76/135 (56.30%), Query Frame = 1
Query: 25 FEGALFDDRDGDDEKRKEERLREATAFAARRREMGWRL---------THDELYNRNGQGVIETAAGP-IHFERGQGQQGRAWDCSLVLAKYLDQR----PEEVRGKRVLELGCGVGLPGVAAAVVGATEVILTDM 387
F G + D ++ K ++E+ REA + + E W L T +L + ++ AG + F+ QGQQ + WDC+LVL+K+L P+ KRV+ELGCG+G+PG+AAA +GA EV+LTDM
Sbjct: 15 FFGRMESDDLFEESKVQQEKRREAQRYVEQYAERDWGLAARQRRVQGTDKDLVTES---TLQLRAGKKVVFQEKQGQQAKVWDCALVLSKFLTNDAYFPPDFFVNKRVIELGCGIGVPGLAAAALGAKEVVLTDM 146
BLAST of mRNA_Ecto-sp9_F_contig9564.17683.1 vs.
Match: Lysine (methyltransferase METTL21D protein n=8 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CG62_PHYNI) HSP 1 Score: 80.1 bits (196), Expect = 2.430e-14 Identity = 50/114 (43.86%), Postives = 65/114 (57.02%), Query Frame = 1
Query: 88 REATAFAARRREMGWRLTHDELYNRNGQG-----VIETAAG-----PIHFERGQGQQGRAWDCSLVLAKYLDQ----RPEEVRGKRVLELGCGVGLPGVAAAVVGATEVILTDM 387
REA + + E GW L + R QG V E+A + F+ QGQQ + WDC+LVLAK+L P KRV+ELGCG+G+PG+AAA +GA EV+LTDM
Sbjct: 36 REAARYVEQYAERGWGLAARQ---RRVQGTDKDMVTESALELRADKKVVFQEKQGQQAKVWDCALVLAKFLSNDAYFSPSFFINKRVIELGCGIGVPGLAAAALGAKEVVLTDM 146
BLAST of mRNA_Ecto-sp9_F_contig9564.17683.1 vs.
Match: Uncharacterized (protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RQW7_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 4.710e-14 Identity = 40/90 (44.44%), Postives = 57/90 (63.33%), Query Frame = 1
Query: 199 IHFERGQGQQGRAWDCSLVLAKYLDQRPEEVRG----KRVLELGCGVGLPGVAAAVVGATEVILTDMGYGNAYCPTSVTTPVTVKSMGEH 456
+ F+ QGQQ + WDC+LVLAK+L G KRV+ELGCG+G+PG+AAA +GA EVILTDM + T++ T+ + ++
Sbjct: 82 VVFQEKQGQQAKVWDCALVLAKFLANNEFFPTGFFHNKRVIELGCGIGVPGLAAAALGAKEVILTDMPVAILWIQTNIQRNQTLNCISDN 171
BLAST of mRNA_Ecto-sp9_F_contig9564.17683.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WGH0_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 4.810e-14 Identity = 42/75 (56.00%), Postives = 54/75 (72.00%), Query Frame = 1
Query: 178 IETAAGP-IHFERGQGQQGRAWDCSLVLAKYLDQRPEEVRG----KRVLELGCGVGLPGVAAAVVGATEVILTDM 387
IE + G + F+ QGQQ + WDC+LVLAK+L RG KRV+ELGCG+G+PG+AAAV+GA EV+LTDM
Sbjct: 73 IELSPGKSVVFQEKQGQQAKVWDCALVLAKFLTNGAYFPRGFFENKRVVELGCGIGVPGLAAAVLGAKEVLLTDM 147
BLAST of mRNA_Ecto-sp9_F_contig9564.17683.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YJ32_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 6.190e-14 Identity = 41/75 (54.67%), Postives = 53/75 (70.67%), Query Frame = 1
Query: 178 IETAAGP-IHFERGQGQQGRAWDCSLVLAKYLDQRPEEVRG----KRVLELGCGVGLPGVAAAVVGATEVILTDM 387
IE + G + F+ QGQQ + WDC+LVLAK+L G KRV+ELGCG+G+PG+AAAV+GA EV+LTDM
Sbjct: 73 IELSPGKSVVFQEKQGQQAKVWDCALVLAKFLTNDAYFPHGFFENKRVVELGCGIGVPGLAAAVLGAEEVLLTDM 147
BLAST of mRNA_Ecto-sp9_F_contig9564.17683.1 vs.
Match: Uncharacterized (protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CTV1_SAPPC) HSP 1 Score: 78.6 bits (192), Expect = 6.640e-14 Identity = 42/91 (46.15%), Postives = 59/91 (64.84%), Query Frame = 1
Query: 130 WRLTH-DELYNRNGQGVIETAAGPIHFERGQGQQGRAWDCSLVLAKYLDQR----PEEVRGKRVLELGCGVGLPGVAAAVVGATEVILTDM 387
W L+H D GQ + T + F GQQ R WDC+LVL+K+L P+ GKRV+ELGCG+G+PG++AA++GA++V+LTDM
Sbjct: 48 WGLSHRDRAGLAEGQLAL-TPTIAVAFAEELGQQRRVWDCALVLSKFLTNAAYFAPDFFLGKRVIELGCGIGVPGISAALLGASDVVLTDM 137 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9564.17683.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig9564.17683.1 >prot_Ecto-sp9_F_contig9564.17683.1 ID=prot_Ecto-sp9_F_contig9564.17683.1|Name=mRNA_Ecto-sp9_F_contig9564.17683.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=122bp MGWRLTHDELYNRNGQGVIETAAGPIHFERGQGQQGRAWDCSLVLAKYLDback to top mRNA from alignment at Ecto-sp9_F_contig9564:2101..4623- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig9564.17683.1 ID=mRNA_Ecto-sp9_F_contig9564.17683.1|Name=mRNA_Ecto-sp9_F_contig9564.17683.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=2523bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9564:2101..4623- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig9564:2101..4623- >mRNA_Ecto-sp9_F_contig9564.17683.1 ID=mRNA_Ecto-sp9_F_contig9564.17683.1|Name=mRNA_Ecto-sp9_F_contig9564.17683.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=732bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9564:2101..4623- (Ectocarpus species9 EcSCA_722f female)back to top |