mRNA_Ecto-sp9_F_contig953.17658.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig953.17658.1
Unique NamemRNA_Ecto-sp9_F_contig953.17658.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig953.17658.1 vs.
Match: RNA (methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLW6_ECTSI)

HSP 1 Score: 778 bits (2010), Expect = 5.640e-278
Identity = 420/470 (89.36%), Postives = 430/470 (91.49%), Query Frame = 2
Query:  131 MAVSETAAGADDRPTTTASVRQERTKKRKRFPHGNYTEGYYNTRYGIDGSGSSAXXXXXXXXAAPVPAGALDPRVGLMRRSWFEGKKCLDVGCNEGHLTLALVRSFRPRRMVGLDIDSYLVRRARKELSTEINAAAHAGKSTEFRPLMPRSLRGGEDGVGDQGQATPATASAPIARPDDEAQGADSSTPNVKANAGGESDAGGGSGGARSTEPEVHVPGRKNECRDSRKGSVGEASESVALPESRGGGTKGGAAAGSTSFGAEMDPARKDGDTKSASRNEKPVATVGGGLSDTHEGGNDATADDTTSGSTVAEAAXXXXXXXXGVMADAAADPDARVLSGCTVSFRCEDFVAEAHGDHGYDVVCLFSVVKWMHINGGDEALRGVFRKTYSLLRPGGRLILEPQPWKTYRKSARQHGSPEAAVIVGTIKLRPQDFPAYLTGEVGFRSWEEVGLPAEGVGGFAKRSVHVFVK 1540
            MA+SETAAGADDRPTTTA VR ERTKKRKRFPHGNYT GYYNTRYGIDGSG+SAXXXXXXXX     AGA DPRVGLMRRSWFEGKKCLDVGCNEGHLTLALVR+FRPRRMVGLDIDSYLVRRARKELS EINAAAHAGKSTEFRPLMPRSLRGGED VGD+ QATPATAS P+ARPD+EA GADSSTP +KANAGGE DA G SGGARSTEPEVHVPGRKNECRDSRKGSVG ASESVALPESRGGGT GGAAAGSTS G E+DP RKD DT+      KPVATVGG LSDTHEGGNDATADDTTSGSTVAEAA        GV+ADAAADPDARVLSGCTVSFRCEDFVAEAHGDHGYDVVCLFSVVKWMHINGGDEALRGVFRKTYSLLRPGGRLILEPQPWKTYRKSARQHG PEAAVIVGTIKLRPQDFPAYLTGEVGFRSWEEVGLPAEGVGGFAKRSVHVFVK
Sbjct:    1 MAISETAAGADDRPTTTAGVRPERTKKRKRFPHGNYT-GYYNTRYGIDGSGASAXXXXXXXXXXXXXAGARDPRVGLMRRSWFEGKKCLDVGCNEGHLTLALVRTFRPRRMVGLDIDSYLVRRARKELSMEINAAAHAGKSTEFRPLMPRSLRGGEDDVGDEEQATPATASIPVARPDEEAHGADSSTPKLKANAGGEGDASGVSGGARSTEPEVHVPGRKNECRDSRKGSVGAASESVALPESRGGGTTGGAAAGSTSVGTEIDPVRKDRDTR------KPVATVGGSLSDTHEGGNDATADDTTSGSTVAEAATVVAVAAAGVVADAAADPDARVLSGCTVSFRCEDFVAEAHGDHGYDVVCLFSVVKWMHINGGDEALRGVFRKTYSLLRPGGRLILEPQPWKTYRKSARQHGLPEAAVIVGTIKLRPQDFPAYLTGEVGFRSWEEVGLPAEGVGGFAKRSVHVFVK 463          
BLAST of mRNA_Ecto-sp9_F_contig953.17658.1 vs.
Match: RNA (methyltransferase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RWP6_9STRA)

HSP 1 Score: 124 bits (311), Expect = 1.750e-27
Identity = 109/419 (26.01%), Postives = 155/419 (36.99%), Query Frame = 2
Query:  344 DPRVGLMRRSWFEGKKCLDVGCNEGHLTLALVRSFRPRRMVGLDIDSYLVRRARKELS------------TEINAAAHAGKSTEFRPLMP--------RSLRGGEDGVGDQGQATPATASAPIARPDDEAQGADSSTPNVKANAGGESDAGGGSGGARSTEPEVHVPGRKNECRDSRKGSVGEASESVALPESRGGGTKGGAAAGSTSFGAEMDPARKDGDTKSASRNEKPVATVGGGLSDTHEGGNDATADDTTSGSTVAEAAXXXXXXXXGVMADAAADPDARVLSGCTVSFRCEDFVAEAHGDHGYDVVCLFSVVKWMHINGGDEALRGVFRKTYSLLRPGGRLILEPQPWKTYRKSARQHGSPEAAVIVGTIKLRPQDFPAYLTGEVGFRSWEEVGLPAEGVGGFAKRSVHVFVK 1540
            DPR+  + RSWFEGK+ LD+GCN G LT+ + +   P  ++G+D+D  L+ RAR  L             +EI A     KS E     P         +++ GEDG+   G         P++                                 +  +P +H                        +P + G                           K+A  ++ P+  V                                                          F+ ED V++AH   GYD +  FSV KW+H+  GDE ++ VF K Y LL PGGRLI+EPQPWK+Y K  R+  S   A     I+LRP+DFP +L   VGFRS E + +      GF +R V+V  K
Sbjct:   55 DPRLAALDRSWFEGKRGLDIGCNSGELTITIAKRLEPSYLLGVDVDPQLISRARGHLKDILRQEQIEKAFSEIPAVKAPAKSEEGAAASPADVSDEEKEAVKVGEDGIKKTGDGDAFANKMPLS--------------------------------FKLWKPSMH--------------------SQATVPRAIG---------------------------KAAVGSKFPLNVV----------------------------------------------------------FKREDIVSDAHAGKGYDFITCFSVTKWIHLFHGDEGIKKVFAKIYELLAPGGRLIIEPQPWKSYHK--RKFTSEVTAANYPKIQLRPKDFPKHLVESVGFRSCEFLEVCQTSAKGF-RRPVYVAQK 333          
BLAST of mRNA_Ecto-sp9_F_contig953.17658.1 vs.
Match: RNA (methyltransferase n=3 Tax=Electrophorus electricus TaxID=8005 RepID=A0A4W4FTP8_ELEEL)

HSP 1 Score: 126 bits (317), Expect = 1.890e-26
Identity = 142/480 (29.58%), Postives = 204/480 (42.50%), Query Frame = 2
Query:  146 TAAGADDRPTTTASVR-QERTKKRK-------------RFPHGNYTEGYYNTRYGIDGSGSSAXXXXXXXXAAPVPAGALDPRVGLMRRSWFEGKKCLDVGCNEGHLTLALVRSFRPRRMVGLDIDSYLVRRARKEL--------STEINAAAHAGKSTEFRPLMPRSLRGGEDGVGDQGQATPATASAPIARPDDEAQGADSSTPNVKANAG-GESDAGGGSGGARSTEPEVHVPGRKNECRDSRKGSVGEASESVALPESRGGGTKGGAAAGSTSFGAEMDPARKDGDTKSASRNEKPVATVGGGLSDTHEGGNDATADDTTSGSTVAEAAXXXXXXXXGVMADAAADPDARVLSG----CTVSFRCEDFVAEAH-----GDHGYDVVCLFSVVKWMHINGGDEALRGVFRKTYSLLRPGGRLILEPQPWKTYRKSARQHGSPEAAVIVGTIKLRPQDFPAYLTGEVGFRSWEEVGLP 1489
            T AG+ DRP    + R Q+RT  R+             +F +GNY     N  YG    G S                  DPRV +++  WF+GK  LD+GCN GHLTL++ +S+RP R+VGLDID  L+  AR+ +        + +   A H+ +S     ++ +   G E   G  G+           + ++E  G +      KA  G GES+      G  + +PE   P         R+G          +PE+  G  +G +AA  T+     +   K GD   AS N   V  V   +S                                G +A A   PD   L        V+F   ++V E+          +DVV   SV KW+H+N GD  L+ +F + Y  LRPGG  ILEPQPW +Y K  R+  +        +I+ +P+ F AYLT EVGF S+E +G P
Sbjct:  409 TQAGSSDRPHQPPNHRRQQRTPSRQXXXXXXXXXXXXXKFQYGNY-----NKYYGYRNPGLSE-----------------DPRVHVLQSEWFQGKAVLDLGCNTGHLTLSIAKSWRPARIVGLDIDGRLIHAARQNIRHYLSEVHTLQARCAGHSDRSRAKGAMVAQGGGGLEAEGGKAGE-----------KAEEEEDGMEVEEQRTKAEKGEGESE------GMAAQDPETDTP---------REGDD--------VPET--GWVEGESAAVETTGHPGSEKVGKKGDV--ASPNGNHVFPVSLRMS-------------------------------RGPIA-APPLPDTHTLPPGDFPANVTFVKGNYVLESDLLLQTQREEFDVVLCLSVTKWVHLNWGDAGLKRLFHRVYHHLRPGGLFILEPQPWSSYSK--RKKLTEAIYKNYYSIRFKPEQFSAYLTTEVGFSSYELIGTP 794          
BLAST of mRNA_Ecto-sp9_F_contig953.17658.1 vs.
Match: RNA (methyltransferase n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3JM65_9STRA)

HSP 1 Score: 121 bits (304), Expect = 2.270e-26
Identity = 113/399 (28.32%), Postives = 157/399 (39.35%), Query Frame = 2
Query:  344 DPRVGLMRRSWFEGKKCLDVGCNEGHLTLALVRSFRPRRMVGLDIDSYLVRRARKELSTEINAAAHAGKSTEFRPLMPRSLRGGEDGVGDQGQATPATASAPIARPDDEAQGADSSTPNVKANAGGESDAGGGSGGARSTEPEVHVPGRKNECRDSRKGSVGEASESVALPESRGGGTKGGAAAGSTSFGAEMDPARKDGDTKSASRNEKPVATVGGGLSDTHEGGNDATADDTTSGSTVAEAAXXXXXXXXGVMADAAADPDARVLSGCTVSFRCEDFVAEAHGDHGYDVVCLFSVVKWMHINGGDEALRGVFRKTYSLLRPGGRLILEPQPWKTYRKSARQHGSPEAAVIVGTIKLRPQDFPAYLTGEVGFRSWEEVGLPAEGVGGFAKRSVHVFVK 1540
            DPR+  + RSWF+GK+ LD+GCN G LT+A+ +   P  ++G+D+D  L+ RAR  L  +I       K+    P +  + +                                             SD  G S G    E    V G                                          AE +   K  D K      K    VG G         DA A +      + + +          +  AA   +  +     V F+ ED VA+AH    YD +  FSV KW+H+  GDE ++ VF K Y LL PGGRLI+EPQPWK+Y K  R+  S   A     I+LRP+DFP +L   VGFRS E + +      GF +R ++V  K
Sbjct:   67 DPRLAALDRSWFDGKRGLDIGCNSGDLTIAIAKRLAPSYLLGVDVDPQLISRARGHLK-DILRQEQIEKAFGEIPAVKTTSK---------------------------------------------SDKKGSSAGHVDAESPADVSGE-----------------------------------------AEQEVVEKKEDEK------KSNVKVGDG---------DAFASEMPLSFRLWKPSMQTQASVPKAIGKAAVGSEFPL----NVIFKREDIVADAHAGKEYDFITCFSVTKWIHLFHGDEGIKKVFEKIYELLTPGGRLIIEPQPWKSYHK--RKFTSDVTAANYPKIQLRPKDFPKHLVEAVGFRSCEFLEVCQTSSKGF-RRPLYVAQK 356          
BLAST of mRNA_Ecto-sp9_F_contig953.17658.1 vs.
Match: RNA (methyltransferase n=9 Tax=Phytophthora TaxID=4783 RepID=W2R9R9_PHYPN)

HSP 1 Score: 120 bits (301), Expect = 3.530e-26
Identity = 111/399 (27.82%), Postives = 155/399 (38.85%), Query Frame = 2
Query:  344 DPRVGLMRRSWFEGKKCLDVGCNEGHLTLALVRSFRPRRMVGLDIDSYLVRRARKELSTEINAAAHAGKSTEFRPLMPRSLRGGEDGVGDQGQATPATASAPIARPDDEAQGADSSTPNVKANAGGESDAGGGSGGARSTEPEVHVPGRKNECRDSRKGSVGEASESVALPESRGGGTKGGAAAGSTSFGAEMDPARKDGDTKSASRNEKPVATVGGGLSDTHEGGNDATADDTTSGSTVAEAAXXXXXXXXGVMADAAADPDARVLSGCTVSFRCEDFVAEAHGDHGYDVVCLFSVVKWMHINGGDEALRGVFRKTYSLLRPGGRLILEPQPWKTYRKSARQHGSPEAAVIVGTIKLRPQDFPAYLTGEVGFRSWEEVGLPAEGVGGFAKRSVHVFVK 1540
            DPR+  + ++WFEGK+ LDVGCN G  T+ + +   P  ++G+D+D  L+ RAR  L  +I       K+    P + +S    EDG              P+A   D                                       G K    +  +GS                                     K  D   A  N+ P++          +    +T   TT    + +AA                           V F+ ED V++AH    YD +  FSV KW+H+  GDE ++ VF K Y LL PGGRLILEPQPWK+Y K  R+  S   A     I+LRP+DFP +L   VGFRS E + +      GF +R V+V  K
Sbjct:   56 DPRLAALDKTWFEGKRGLDVGCNSGEFTITIAKRLDPSYLLGVDVDPQLISRARGHLK-DILRQEQIEKAFVEIPAV-KSTAKNEDG--------------PVASAAD---------------------------------------GEKESMNEEEEGS-------------------------------------KKNDGGDAFANDMPLS---------FKLWKPSTQTQTTVPRAIGKAAVGSKFPL-------------------NVVFKREDIVSDAHAGKDYDFITCFSVTKWIHLFHGDEGIKKVFAKIYELLAPGGRLILEPQPWKSYHK--RKFTSEVTATNYPKIQLRPKDFPKHLVESVGFRSCEFLEVCQTSSKGF-RRPVYVAQK 331          
BLAST of mRNA_Ecto-sp9_F_contig953.17658.1 vs.
Match: RNA (methyltransferase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C8W2_PYTIN)

HSP 1 Score: 117 bits (293), Expect = 2.120e-25
Identity = 108/394 (27.41%), Postives = 160/394 (40.61%), Query Frame = 2
Query:  344 DPRVGLMRRSWFEGKKCLDVGCNEGHLTLALVRSFRPRRMVGLDIDSYLVRRARKELSTEINAAAHAGKSTEFRPLMPRS-LRGGEDGVGDQGQATPATASAPIARPDDEAQGADSSTPNVKANAGGESDAGGGSGGARSTEPEVHVPGRKNECRDSRKGSVGEASESVALPESRGGGTKGGAAAGSTSFGAEMDPARKDGDTKSASRNEKPVATVGGGLSDTHEGGNDATADDTTSGSTVAEAAXXXXXXXXGVMADAAADPDARVLSGCTVSFRCEDFVAEAHGDHGYDVVCLFSVVKWMHINGGDEALRGVFRKTYSLLRPGGRLILEPQPWKTYRKSARQHGSPEAAVIVGTIKLRPQDFPAYLTGEVGFRSWEEVGLPAEGVGGFAKRS 1522
            DPR+ ++ + WF GK+ LDVGCN G LT+A+ + F P  ++G+D+D  L+ RAR +L                + +M R  L+G  + V     AT AT                                                  R ++  D+   S  EA+ S    ES+           +++   ++  + K   T + S+   P                                         G +A  +  P         V F+ ED V +AH    YD +  FSV KW+H+  GD+ ++GVF+  + LL PGGRLILEPQPWK+Y K  R+  S   A     I+LRP+DFPA+L   VGF+S E + +      GF + S
Sbjct:   35 DPRLAVLSKDWFAGKRGLDVGCNSGDLTVAIAKKFEPAYLLGIDVDPQLIARARGQL----------------KDIMQREHLQGALEAV-----ATSAT--------------------------------------------------RSDDATDAATDSSAEAAPSH--DESK-----------TSAMVTDVPLSFKLWKTPAHSKTSAPKVL--------------------------------------GKVALGSEFPR-------NVVFKREDIVKDAHAGKDYDFITCFSVTKWIHLFHGDDGIKGVFQHLHDLLAPGGRLILEPQPWKSYHK--RKFTSAVTAANYDKIQLRPKDFPAFLVETVGFKSCEFLQVCQTTSKGFRRPS 297          
BLAST of mRNA_Ecto-sp9_F_contig953.17658.1 vs.
Match: RNA (methyltransferase n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GUA0_9STRA)

HSP 1 Score: 111 bits (277), Expect = 7.470e-25
Identity = 56/128 (43.75%), Postives = 78/128 (60.94%), Query Frame = 2
Query: 1157 VSFRCEDFVAEAHGDHGYDVVCLFSVVKWMHINGGDEALRGVFRKTYSLLRPGGRLILEPQPWKTYRKSARQHGSPEAAVIVGTIKLRPQDFPAYLTGEVGFRSWEEVGLPAEGVGGFAKRSVHVFVK 1540
            + FR +D +  +     YD +   SV KW+H+  GDE +R +FRK YSLL+PGGRLILEPQ WK+Y K  R+  S +     G I+LRP+DFP  L  E+GF+S E + +      GF +R ++V  K
Sbjct:   28 IQFRQQDMICNSEAAEQYDFILCLSVTKWIHLLHGDEGIRVLFRKIYSLLKPGGRLILEPQTWKSYHK--RKFTSAKTEANYGRIQLRPKDFPLCLIDEIGFKSSEFIRVCQTSSKGF-RRPIYVIQK 152          
BLAST of mRNA_Ecto-sp9_F_contig953.17658.1 vs.
Match: RNA (methyltransferase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VGL8_9STRA)

HSP 1 Score: 115 bits (288), Expect = 9.930e-25
Identity = 61/128 (47.66%), Postives = 80/128 (62.50%), Query Frame = 2
Query: 1157 VSFRCEDFVAEAHGDHGYDVVCLFSVVKWMHINGGDEALRGVFRKTYSLLRPGGRLILEPQPWKTYRKSARQHGSPEAAVIVGTIKLRPQDFPAYLTGEVGFRSWEEVGLPAEGVGGFAKRSVHVFVK 1540
            V F+ ED V++AH    YD +  FSV KW+H+  GDE ++ VF K + LL PGGRLILEPQPWK+Y K  R+  S   A     I+LRP+DFP +L   VGFRS E + +      GF +R V+V +K
Sbjct:  176 VIFKREDIVSDAHAGKSYDFITCFSVTKWIHLFHGDEGIKKVFAKIHELLAPGGRLILEPQPWKSYHK--RKFTSEVTAANYPKIQLRPKDFPKHLVDTVGFRSCEFLEVCQTSSKGF-RRPVYVALK 300          
BLAST of mRNA_Ecto-sp9_F_contig953.17658.1 vs.
Match: RNA (methyltransferase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HSU9_KLENI)

HSP 1 Score: 120 bits (302), Expect = 1.010e-24
Identity = 143/499 (28.66%), Postives = 201/499 (40.28%), Query Frame = 2
Query:  212 RKRFPHGNYTEGYYNTRYGIDGSGSSAXXXXXXXXAAPVPAGALDPRVGLMRRSWFEGKKCLDVGCNEGHLTLALVRSFRPRRMVGLDIDSYLVRRARKELSTEINAAAHAGKSTEFRPLMPRSLRGGEDGVGDQ-----GQATPATASAPIARPDDE--AQGADS-----------------STPNVKANAGGES--DAGGGSGGARSTEP---------------------EVHVPGRKNECRDSRKGSVGEAS------ESVALPESRG--GGTKGGAAAGSTSFGAEMDPARKDGDTKSASRNEKPVATVGGGLSDTHEGGNDATADDTTSGSTVAEAAXXXXXXXXGVMADAAADPDARVLSGCTVSFRCEDFVAEAHGDHGYDVVCLFSVVKWMHINGGDEALRGVFRKTYSLLRPGGRLILEPQPWKTYRKSARQHGSPEAAVIVGTIKLRPQDFPAYLTGEVGFRSWEEVGLPAEG-VGGFAKRSVHVFVK 1540
            +K FP+GNY   YY  R+                        + DPR+ L ++ WF+GK CLDVGCNEG++T+A+ + F    MVG+DID  LV +A+  L  E      A K    R      L G  D  G +     G  +  +   P+ +      AQG DS                 ST    +  GG      GGG G  R  +                       V V G   +  D   GS+GEAS      +    PE  G  G T+G           E    ++D   ++     K      G L +    G  +T D   S +T   ++        G   +       R      V FR E+FV     +  YDVV   SVVKW+H+N GD+ L   F K Y  L+PGG  ILEPQPWK+Y+ +     + +       IK+ P  F   L  ++GFRS + V     G +GGF  R+++++ K
Sbjct:  245 KKVFPYGNYNR-YYGYRF--------------------AKTLSEDPRLSLFQKEWFQGKACLDVGCNEGYVTIAVAQKFECGSMVGVDIDGSLVAKAKSHLKREAAILRQANKPQRAR----LELAGQADHPGVRQTLLWGTQSSRSPEGPLRQEKRRRLAQGYDSGHPPESDIGETGRRVVSSTSEQVSTVGGFEVVGEGGGDGSGRGADEAADVXXXXXXXXXXXXGEESGRVVVSGVPEQTADGTLGSLGEASLHSRFAQEGEKPEGLGLVGLTEG-----------ENGDVKEDVLLETVMLEGKGEGMAEGTLDERETEGEVSTIDPPASEATGFLSSEVRECLGGGSALE-------RKRFSQNVQFRKENFVVSPVEEEKYDVVMSLSVVKWIHLNWGDDGLLRFFSKVYKSLKPGGLFILEPQPWKSYKSNRAVSETTQRHFK--EIKILPDQFSNVLQSKIGFRSADIVTPAVPGSIGGFG-RAIYLYRK 697          
BLAST of mRNA_Ecto-sp9_F_contig953.17658.1 vs.
Match: RNA (methyltransferase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GWV4_9STRA)

HSP 1 Score: 115 bits (287), Expect = 3.180e-24
Identity = 62/128 (48.44%), Postives = 79/128 (61.72%), Query Frame = 2
Query: 1157 VSFRCEDFVAEAHGDHGYDVVCLFSVVKWMHINGGDEALRGVFRKTYSLLRPGGRLILEPQPWKTYRKSARQHGSPEAAVIVGTIKLRPQDFPAYLTGEVGFRSWEEVGLPAEGVGGFAKRSVHVFVK 1540
            V F+ ED V +AH    YD +  FSV KW+H+  GDE ++ VF K Y LL PGGRLILEPQPWK+Y K  R+  S   A     I+LRP+DFP +L   VGFRS E + +      GF +R V+V +K
Sbjct:  221 VIFKREDVVTDAHAGMDYDFITCFSVTKWIHLFHGDEGIKKVFVKIYELLAPGGRLILEPQPWKSYHK--RKFTSDITAANYPKIQLRPKDFPTHLVEMVGFRSCEFLEVCQTSAKGF-RRPVYVALK 345          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig953.17658.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
RNA5.640e-27889.36methyltransferase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
RNA1.750e-2726.01methyltransferase n=2 Tax=Phytophthora TaxID=4783 ... [more]
RNA1.890e-2629.58methyltransferase n=3 Tax=Electrophorus electricus... [more]
RNA2.270e-2628.32methyltransferase n=4 Tax=Phytophthora TaxID=4783 ... [more]
RNA3.530e-2627.82methyltransferase n=9 Tax=Phytophthora TaxID=4783 ... [more]
RNA2.120e-2527.41methyltransferase n=1 Tax=Pythium insidiosum TaxID... [more]
RNA7.470e-2543.75methyltransferase n=1 Tax=Albugo candida TaxID=653... [more]
RNA9.930e-2547.66methyltransferase n=1 Tax=Phytophthora megakarya T... [more]
RNA1.010e-2428.66methyltransferase n=1 Tax=Klebsormidium nitens Tax... [more]
RNA3.180e-2448.44methyltransferase n=3 Tax=Phytophthora kernoviae T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig953contigEcto-sp9_F_contig953:9549..13443 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score794.3
Seed ortholog evalue3.2e-227
Seed eggNOG ortholog2880.D7FLW6
EggNOG free text desc.negative regulation of pre-miRNA processing
EggNOG OGsKOG2899@1,KOG2899@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-26_001430.1
Exons5
Model size2108
Cds size1413
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931037.5966983-UTR-Ecto-sp9_F_contig953:9548..101131622931037.5966983-UTR-Ecto-sp9_F_contig953:9548..10113Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig953 9549..10113 -
1692279003.405212-UTR-Ecto-sp9_F_contig953:9548..101131692279003.405212-UTR-Ecto-sp9_F_contig953:9548..10113Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig953 9549..10113 -
1622931037.7227955-UTR-Ecto-sp9_F_contig953:13313..134431622931037.7227955-UTR-Ecto-sp9_F_contig953:13313..13443Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig953 13314..13443 -
1692279003.4705238-UTR-Ecto-sp9_F_contig953:13313..134431692279003.4705238-UTR-Ecto-sp9_F_contig953:13313..13443Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig953 13314..13443 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931037.6253371-CDS-Ecto-sp9_F_contig953:10113..102031622931037.6253371-CDS-Ecto-sp9_F_contig953:10113..10203Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig953 10114..10203 -
1692279003.4162405-CDS-Ecto-sp9_F_contig953:10113..102031692279003.4162405-CDS-Ecto-sp9_F_contig953:10113..10203Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig953 10114..10203 -
1622931037.6421287-CDS-Ecto-sp9_F_contig953:10430..105441622931037.6421287-CDS-Ecto-sp9_F_contig953:10430..10544Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig953 10431..10544 -
1692279003.4272225-CDS-Ecto-sp9_F_contig953:10430..105441692279003.4272225-CDS-Ecto-sp9_F_contig953:10430..10544Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig953 10431..10544 -
1622931037.6603053-CDS-Ecto-sp9_F_contig953:10909..117401622931037.6603053-CDS-Ecto-sp9_F_contig953:10909..11740Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig953 10910..11740 -
1692279003.438307-CDS-Ecto-sp9_F_contig953:10909..117401692279003.438307-CDS-Ecto-sp9_F_contig953:10909..11740Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig953 10910..11740 -
1622931037.6805055-CDS-Ecto-sp9_F_contig953:12113..123791622931037.6805055-CDS-Ecto-sp9_F_contig953:12113..12379Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig953 12114..12379 -
1692279003.4488227-CDS-Ecto-sp9_F_contig953:12113..123791692279003.4488227-CDS-Ecto-sp9_F_contig953:12113..12379Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig953 12114..12379 -
1622931037.6944232-CDS-Ecto-sp9_F_contig953:13201..133131622931037.6944232-CDS-Ecto-sp9_F_contig953:13201..13313Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig953 13202..13313 -
1692279003.4594793-CDS-Ecto-sp9_F_contig953:13201..133131692279003.4594793-CDS-Ecto-sp9_F_contig953:13201..13313Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig953 13202..13313 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig953.17658.1prot_Ecto-sp9_F_contig953.17658.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig953 10114..13313 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig953.17658.1

>prot_Ecto-sp9_F_contig953.17658.1 ID=prot_Ecto-sp9_F_contig953.17658.1|Name=mRNA_Ecto-sp9_F_contig953.17658.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=471bp
MAVSETAAGADDRPTTTASVRQERTKKRKRFPHGNYTEGYYNTRYGIDGS
GSSAAGGSSTTTAAPVPAGALDPRVGLMRRSWFEGKKCLDVGCNEGHLTL
ALVRSFRPRRMVGLDIDSYLVRRARKELSTEINAAAHAGKSTEFRPLMPR
SLRGGEDGVGDQGQATPATASAPIARPDDEAQGADSSTPNVKANAGGESD
AGGGSGGARSTEPEVHVPGRKNECRDSRKGSVGEASESVALPESRGGGTK
GGAAAGSTSFGAEMDPARKDGDTKSASRNEKPVATVGGGLSDTHEGGNDA
TADDTTSGSTVAEAATVAAVAAAGVMADAAADPDARVLSGCTVSFRCEDF
VAEAHGDHGYDVVCLFSVVKWMHINGGDEALRGVFRKTYSLLRPGGRLIL
EPQPWKTYRKSARQHGSPEAAVIVGTIKLRPQDFPAYLTGEVGFRSWEEV
GLPAEGVGGFAKRSVHVFVK*
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mRNA from alignment at Ecto-sp9_F_contig953:9549..13443-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig953.17658.1 ID=mRNA_Ecto-sp9_F_contig953.17658.1|Name=mRNA_Ecto-sp9_F_contig953.17658.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3895bp|location=Sequence derived from alignment at Ecto-sp9_F_contig953:9549..13443- (Ectocarpus species9 EcSCA_722f female)
CTCCGCTGCTTGTTCTTGTGTCTCCTTCATTGCGCCTGTGCCCGTGCCCC TGTCCATGGATGCCATTGGTGCGAAATTTTAGGTAGAGGCTCGACGTGGC GTTTGTGTGACTACGTACACATACATATTCATGGCTGTCTCAGAGACAGC AGCAGGTGCTGATGACCGCCCAACAACAACCGCTAGTGTCCGTCAGGAAA GGACTAAGAAGCGCAAACGCTTCCCGCACGGCAACTACACAGGTCAGAAT CCTTAGATTCTTCAGCTCCATTGCCCTGTACATTCCGAGCATCCGGTGCG TTTTTCCCATCTTGTTGATGCAGCCTTGTCGTTTTTCGCCGAGAAACTCC GCAACCAATTTGTGGAGAAACCCACGGCCCAGATGCCCAGATTCAAATCG GCAGGCCGCACGCCACGCATGATCCCGCGCGAGGAGGCACCATATCGCCG GGTACACCGCGCAGGGTTTCTCGTTTGTAGGTGTGGGAATGTCTCTGAAA GGATGATAAAAATTTCGATGCTTCGTCTGGAGTCGCAGACAGCCCAAACA ATGCGTACGTTGACAGCGAGACATCCCTTGCACGTTCATCTTCGGCCCAA CTTGTCCACTCGATCCACTCGAGGACAATGATACAGGAGTCCAAGCTTGA CAGCAGCGTGCTTTGATTACGACACAACATTCAGCACGGGCATATCGACG TCACTGCATACAGTAGCTCGGTACGCTCTTGGGGTCGCAAAAACGTACAT ACACCAACGCGCCGCAGTTTATTTTGTACTTCCGCAGCATGATAAAGGGT TGTTGAGCGACACCACTGCGGTTGGGAGGAAGCTGCGTCCACTGTCGCTG GACCTGTCGCCGCCATGTTGCGGAAGCCATCTCGCAAGCGCCGCTCCGCA AAATGCTCGAGGAAATGGGGCTCACCAACCTCCACAGCTTGCTCACCTCT TAGCATCCGCAGACTTCGTTACTCACACCGCGCCCTCTATTGTAGCGTGT GAGGGATCGATGATTTTAGCAGTTTCGTCATTCCCCCAATGCCCCTCGCC CGCCTTCCGCCGAGAAGGCTACTACAATACCCGCTACGGGATTGATGGCT CTGGCTCTTCTGCCGCCGGTGGCTCCTCAACCACCACCGCCGCTCCCGTT CCCGCGGGCGCCCTCGACCCTCGGGTGGGGCTGATGCGACGGTCCTGGTT CGAGGGAAAAAAGTGTTTGGATGTCGGCTGCAACGAGGGACACCTCACGC TGGCCCTTGTGAGATCGTTCCGCCCCCGACGAATGGTGGGTCTGGACATC GACAGCTATCTGGTGCGACGAGCTCGGAAGGTGAGCGGGGGAATGTGTAT CCACCTGCGGTGATTTTGCACATTGTTTTTCGATTCTTGGAACATGTTCG ACTGCGGCTCCATCTTGTGCGGGAGAATATCTCAAAGCGTGACTTGGCAG GCTACCGGCGTCGCTGAAGAGGACGTCGTTGTTGTGTCTACCGAGGCGTT TTTATCTCGAGGCTTGTAGCATGTGCTGGTATGACCTCATGCGCCACCCC AGCTCGCCCCGTTCGACGTTGACATGAATATGCTTACCCCGGGGGGTTGC TTTACGCCACATCTCCTTCGGGCGGCAATTTTTTTCTGACAGCCGGTTGT ATCTTCATCGACCACTGCTCTGCTTTTCGCCTTGAACGGCGTTTCCCAAT TAGGAGCTCTCGACGGAGATCAACGCAGCTGCCCATGCCGGCAAGAGCAC AGAGTTCAGGCCGTTGATGCCGCGTTCTCTGCGCGGTGGCGAAGATGGCG TCGGTGACCAGGGGCAAGCCACCCCTGCCACCGCGTCCGCCCCCATAGCG CGCCCCGATGACGAGGCACAAGGGGCGGATAGCAGCACCCCGAATGTAAA GGCAAACGCTGGTGGCGAAAGTGATGCTGGTGGCGGTAGCGGTGGTGCAA GGTCCACTGAACCAGAAGTGCATGTGCCCGGCCGGAAAAACGAGTGTCGT GACTCGCGGAAGGGGTCTGTGGGAGAGGCAAGCGAGAGTGTGGCGCTGCC AGAATCACGCGGGGGCGGCACGAAGGGCGGCGCGGCTGCGGGCTCCACCT CCTTTGGTGCCGAGATGGATCCCGCTCGGAAGGACGGAGACACTAAGTCG GCTTCCAGAAACGAGAAACCGGTAGCTACTGTTGGAGGTGGCCTATCAGA CACACACGAAGGGGGTAACGATGCTACTGCCGACGACACTACCAGCGGTT CTACCGTTGCTGAGGCCGCCACCGTCGCCGCTGTCGCCGCTGCCGGCGTG ATGGCCGATGCCGCCGCCGACCCCGACGCAAGAGTGTTGTCCGGGTGCAC GGTTTCGTTTCGCTGCGAGGACTTCGTCGCCGAAGCCCACGGTGACCACG GATACGACGTCGTGTGTCTGTTCAGCGTGGTAAAGTGGATGCACATCAAC GGCGGGGACGAGGCGTTGCGGGGCGTGTTTCGAAAGACGTACAGTCTGCT ACGGCCTGGTGGGAGGCTCATCTTGGAACCTCAGGTGCAGTTTGTTCGTT GACGATAATAGTGTGATTGTGGCAGCGGATACAAGTGTGTTGTGTGTGTG ACTATTGCTGTACGCTCGACCATGTCTGCTCCCCTCGGCTTTCGCTGTGC CTCTGGCGTGCGCTGCGTTGGCCCTCTGTCGAGCGACATATCGCCGATAC TTGCACATCTTCGCTCGCAGCATCATGGACACGCAAGCAAGTGATTCAAC CGGTAGATAATATTAGTGCAGAGGGTTGCAGCTTTCAAAAGGCAGGCGCT AGTAGACAGCGTTCCGGTTGATGACGCCGGTTTTGCCGACATTCAGCCAT CGTGACTAGATACCATCCTCCGCCGTGCTCACCGTCCTCCGCCTTACAGC CATGGAAAACGTACAGGAAGAGCGCCCGCCAGCATGGATCGCCAGAGGCC GCAGTTATAGTCGGGACCATAAAGCTTCGTCCTCAGGACTTCCCTGCCTA CCTCACGGGAGAGGTGAGCCCCTCCGATGGTTTCTAGCCGTTTGTCTCGC CGCTGAAACGCTGCACCCGGCTTTTGATGCTCTCGTTCTTCCAGGTGTAC CCCAACTCGCGCACGCATGTAGGGTCAGCGTTTTTAGGGGCGGTGGTCTC CTAATATATCCAAAATGAAGACCAGCAGCAGAGTAGTACCCCTATTGAAT CCCATCATGTTCCGCACGTGACTACAATCAACCAACGCAGGTGGGGTTCC GCTCCTGGGAGGAGGTCGGGCTGCCGGCGGAAGGCGTAGGAGGATTCGCA AAAAGGAGCGTACATGTGTTCGTGAAGTAACCTGCTGACGTCCCACAGAA CATTCCTTCATCTTTTGGAAGAATGAACGAAGAAGGACCAACGAACACGG GGAACACAACATGAATACAGGAAATCAATAGTTCCCGAGAGAGGGGCTAC ACCCGCCCACACGAACAGCTGTTTTGGCAAGGGGCTGCGTTTTGATAGCG TTCCTTCGAACGCCGCCGGGCGTCATGGGTAAAATCATTCACATGTCGGG CGCAGACGTAACGGGTTTGGGTTTTGTGTCAATGGACATCCGGTGATGAG ACCAACCTGTATTTCATTGTACACTCATCGGGGTAAGGTTTGATAGAAAC GTCCTTGGAGGCTTGCAGACATATCCGCTTCTCTTCTGGCACAAAGTCCA TCATTCTGGCGCGGTACCCAGAAAAATCGTTTGGATGTTTACGTACACGC GGAAACTATGGATTGTGTGGTGGCTGACGGCTGCTACCACGTACACTTGG AAATTGGCTCAACTCCCATATATAGGGGGGCCCAAAAACAATTATATTTA CTATTTCGCGCGAAGCGCGAAAAAGAACGGGCGGAGAAAGAGACG
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig953:9549..13443-

>mRNA_Ecto-sp9_F_contig953.17658.1 ID=mRNA_Ecto-sp9_F_contig953.17658.1|Name=mRNA_Ecto-sp9_F_contig953.17658.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2826bp|location=Sequence derived from alignment at Ecto-sp9_F_contig953:9549..13443- (Ectocarpus species9 EcSCA_722f female)
ATGGCTGTCTCAGAGACAGCAGCAGGTGCTGATGACCGCCCAACAACAAC
CGCTAGTGTCCGTCAGGAAAGGACTAAGAAGCGCAAACGCTTCCCGCACG
GCAACTACACAGATGGCTGTCTCAGAGACAGCAGCAGGTGCTGATGACCG
CCCAACAACAACCGCTAGTGTCCGTCAGGAAAGGACTAAGAAGCGCAAAC
GCTTCCCGCACGGCAACTACACAGAAGGCTACTACAATACCCGCTACGGG
ATTGATGGCTCTGGCTCTTCTGCCGCCGGTGGCTCCTCAACCACCACCGC
CGCTCCCGTTCCCGCGGGCGCCCTCGACCCTCGGGTGGGGCTGATGCGAC
GGTCCTGGTTCGAGGGAAAAAAGTGTTTGGATGTCGGCTGCAACGAGGGA
CACCTCACGCTGGCCCTTGTGAGATCGTTCCGCCCCCGACGAATGGTGGG
TCTGGACATCGACAGCTATCTGGTGCGACGAGCTCGGAAGAAGGCTACTA
CAATACCCGCTACGGGATTGATGGCTCTGGCTCTTCTGCCGCCGGTGGCT
CCTCAACCACCACCGCCGCTCCCGTTCCCGCGGGCGCCCTCGACCCTCGG
GTGGGGCTGATGCGACGGTCCTGGTTCGAGGGAAAAAAGTGTTTGGATGT
CGGCTGCAACGAGGGACACCTCACGCTGGCCCTTGTGAGATCGTTCCGCC
CCCGACGAATGGTGGGTCTGGACATCGACAGCTATCTGGTGCGACGAGCT
CGGAAGGAGCTCTCGACGGAGATCAACGCAGCTGCCCATGCCGGCAAGAG
CACAGAGTTCAGGCCGTTGATGCCGCGTTCTCTGCGCGGTGGCGAAGATG
GCGTCGGTGACCAGGGGCAAGCCACCCCTGCCACCGCGTCCGCCCCCATA
GCGCGCCCCGATGACGAGGCACAAGGGGCGGATAGCAGCACCCCGAATGT
AAAGGCAAACGCTGGTGGCGAAAGTGATGCTGGTGGCGGTAGCGGTGGTG
CAAGGTCCACTGAACCAGAAGTGCATGTGCCCGGCCGGAAAAACGAGTGT
CGTGACTCGCGGAAGGGGTCTGTGGGAGAGGCAAGCGAGAGTGTGGCGCT
GCCAGAATCACGCGGGGGCGGCACGAAGGGCGGCGCGGCTGCGGGCTCCA
CCTCCTTTGGTGCCGAGATGGATCCCGCTCGGAAGGACGGAGACACTAAG
TCGGCTTCCAGAAACGAGAAACCGGTAGCTACTGTTGGAGGTGGCCTATC
AGACACACACGAAGGGGGTAACGATGCTACTGCCGACGACACTACCAGCG
GTTCTACCGTTGCTGAGGCCGCCACCGTCGCCGCTGTCGCCGCTGCCGGC
GTGATGGCCGATGCCGCCGCCGACCCCGACGCAAGAGTGTTGTCCGGGTG
CACGGTTTCGTTTCGCTGCGAGGACTTCGTCGCCGAAGCCCACGGTGACC
ACGGATACGACGTCGTGTGTCTGTTCAGCGTGGTAAAGTGGATGCACATC
AACGGCGGGGACGAGGCGTTGCGGGGCGTGTTTCGAAAGACGTACAGTCT
GCTACGGCCTGGTGGGAGGCTCATCTTGGAACCTCAGGAGCTCTCGACGG
AGATCAACGCAGCTGCCCATGCCGGCAAGAGCACAGAGTTCAGGCCGTTG
ATGCCGCGTTCTCTGCGCGGTGGCGAAGATGGCGTCGGTGACCAGGGGCA
AGCCACCCCTGCCACCGCGTCCGCCCCCATAGCGCGCCCCGATGACGAGG
CACAAGGGGCGGATAGCAGCACCCCGAATGTAAAGGCAAACGCTGGTGGC
GAAAGTGATGCTGGTGGCGGTAGCGGTGGTGCAAGGTCCACTGAACCAGA
AGTGCATGTGCCCGGCCGGAAAAACGAGTGTCGTGACTCGCGGAAGGGGT
CTGTGGGAGAGGCAAGCGAGAGTGTGGCGCTGCCAGAATCACGCGGGGGC
GGCACGAAGGGCGGCGCGGCTGCGGGCTCCACCTCCTTTGGTGCCGAGAT
GGATCCCGCTCGGAAGGACGGAGACACTAAGTCGGCTTCCAGAAACGAGA
AACCGGTAGCTACTGTTGGAGGTGGCCTATCAGACACACACGAAGGGGGT
AACGATGCTACTGCCGACGACACTACCAGCGGTTCTACCGTTGCTGAGGC
CGCCACCGTCGCCGCTGTCGCCGCTGCCGGCGTGATGGCCGATGCCGCCG
CCGACCCCGACGCAAGAGTGTTGTCCGGGTGCACGGTTTCGTTTCGCTGC
GAGGACTTCGTCGCCGAAGCCCACGGTGACCACGGATACGACGTCGTGTG
TCTGTTCAGCGTGGTAAAGTGGATGCACATCAACGGCGGGGACGAGGCGT
TGCGGGGCGTGTTTCGAAAGACGTACAGTCTGCTACGGCCTGGTGGGAGG
CTCATCTTGGAACCTCAGCCATGGAAAACGTACAGGAAGAGCGCCCGCCA
GCATGGATCGCCAGAGGCCGCAGTTATAGTCGGGACCATAAAGCTTCGTC
CTCAGGACTTCCCTGCCTACCTCACGGGAGAGCCATGGAAAACGTACAGG
AAGAGCGCCCGCCAGCATGGATCGCCAGAGGCCGCAGTTATAGTCGGGAC
CATAAAGCTTCGTCCTCAGGACTTCCCTGCCTACCTCACGGGAGAGGTGG
GGTTCCGCTCCTGGGAGGAGGTCGGGCTGCCGGCGGAAGGCGTAGGAGGA
TTCGCAAAAAGGAGCGTACATGTGTTCGTGAAGTAAGTGGGGTTCCGCTC
CTGGGAGGAGGTCGGGCTGCCGGCGGAAGGCGTAGGAGGATTCGCAAAAA
GGAGCGTACATGTGTTCGTGAAGTAA
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