mRNA_Ecto-sp9_F_contig947.17616.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig947.17616.1
Unique NamemRNA_Ecto-sp9_F_contig947.17616.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
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BLAST of mRNA_Ecto-sp9_F_contig947.17616.1 vs.
Match: GPN-loop (GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKI4_ECTSI)

HSP 1 Score: 469 bits (1208), Expect = 4.730e-163
Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 3 
Query:   78 MEFLQKVEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPVVCIVMGMAGSGKTTLLQRLNLYTAEKGIKSYFINLDPAVKQVPFGASIDIRDTVNYKEVMSQYGLGPNGAITTSLNLFATRFDQVLDLLEKRSDDLEYVFIDTPGQIEVFTWSASGQIITETLASAFPTTLVYVVDTPRTANPTTFMSNMLYACSVLYKSRLPLVLALNKSDILSPKFALEWMSDFEKLQEALDTSGDESYMNSLNRSLALVLDEFYNALTAVGVSAASGDGMPALFK 950
            MEFLQKVEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPVVCIVMGMAGSGKTTLLQRLNLYTAEKGIKSYFINLDPAVKQVPFGASIDIRDTVNYKEVMSQYGLGPNGAITTSLNLFATRFDQVLDLLEKRSDDLEYVFIDTPGQIEVFTWSASGQIITETLASAFPTTLVYVVDTPRTANPTTFMSNMLYACSVLYKSRLPLVLALNKSDILSPKFALEWMSDFEKLQEALDTSGDESYMNSLNRSLALVLDEFYNALTAVGVSAASGDGMPALFK
Sbjct:    1 MEFLQKVEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPVVCIVMGMAGSGKTTLLQRLNLYTAEKGIKSYFINLDPAVKQVPFGASIDIRDTVNYKEVMSQYGLGPNGAITTSLNLFATRFDQVLDLLEKRSDDLEYVFIDTPGQIEVFTWSASGQIITETLASAFPTTLVYVVDTPRTANPTTFMSNMLYACSVLYKSRLPLVLALNKSDILSPKFALEWMSDFEKLQEALDTSGDESYMNSLNRSLALVLDEFYNALTAVGVSAASGDGMPALFK 291
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BLAST of mRNA_Ecto-sp9_F_contig947.17616.1 vs.
Match: GPN-loop (GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZW9_9STRA)

HSP 1 Score: 372 bits (954), Expect = 1.440e-125
Identity = 186/244 (76.23%), Postives = 212/244 (86.89%), Query Frame = 3 
Query:  228 KPVVCIVMGMAGSGKTTLLQRLNLYTAEKGIKSYFINLDPAVKQVPFGASIDIRDTVNYKEVMSQYGLGPNGAITTSLNLFATRFDQVLDLLEKRSDD---LEYVFIDTPGQIEVFTWSASGQIITETLASAFPTTLVYVVDTPRTANPTTFMSNMLYACSVLYKSRLPLVLALNKSDILSPKFALEWMSDFEKLQEALDTSGDESYMNSLNRSLALVLDEFYNALTAVGVSAASGDGMPALFK 950
            KPVVCIV+GMAGSGKTTLLQR+NL       + Y+INLDPAV QVPFGA+IDIRDTVNYKEVM+QYGLGPNG I TSLNLFATRFDQV+ L+E RSD    L+YVF+DTPGQIEVFTWSASGQIITE+LASAFPT L+YV+DTPRT +PTTFMSNMLYACS+LY++RLP+VLA NKSD+ SP FA EWMSDFEK QEALD + DESYM SLNRSL+LVLDEFY+ L  VGVSAA+G+G+  LF+
Sbjct:   40 KPVVCIVLGMAGSGKTTLLQRINLQMNSSDKQGYYINLDPAVTQVPFGANIDIRDTVNYKEVMAQYGLGPNGGIMTSLNLFATRFDQVIGLMEARSDSAEGLDYVFVDTPGQIEVFTWSASGQIITESLASAFPTCLIYVIDTPRTTSPTTFMSNMLYACSILYRTRLPMVLAFNKSDVTSPDFAAEWMSDFEKFQEALDETADESYMGSLNRSLSLVLDEFYSTLKHVGVSAATGEGIDQLFQ 283
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BLAST of mRNA_Ecto-sp9_F_contig947.17616.1 vs.
Match: GPN-loop (GTPase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6Q0_9STRA)

HSP 1 Score: 355 bits (911), Expect = 1.540e-118
Identity = 178/242 (73.55%), Postives = 205/242 (84.71%), Query Frame = 3 
Query:  228 KPVVCIVMGMAGSGKTTLLQRLNLYTAEKGIKSYFINLDPAVKQVPFGASIDIRDTVNYKEVMSQYGLGPNGAITTSLNLFATRFDQVLDLLEKRSDDLEYVFIDTPGQIEVFTWSASGQIITETLASAFPTTLVYVVDTPRTANPTTFMSNMLYACSVLYKSRLPLVLALNKSDILSPKFALEWMSDFEKLQEALDTSGDE-SYMNSLNRSLALVLDEFYNALTAVGVSAASGDGMPALFK 950
            KP+V + MGMAGSGKTTL+QRLNL    +G KSY++NLDPAVK VPF A+IDIRDTVNYKEVM QY LGPNGAI TSLNLFATRFDQVL +LEKR+ DLEYV +DTPGQIEVFTWSASG IITE LAS+FPT LVYVVDTPRT++PTTFMSNMLYACS+LYK+RLP+VL  NK+DILS  FA++WM DFEK QE LD  G++  YM++L RS++LVLDEFY  L  VGVSAASGDG+   F+
Sbjct:   62 KPIVLLFMGMAGSGKTTLVQRLNLELNSQGTKSYYVNLDPAVKSVPFAANIDIRDTVNYKEVMKQYELGPNGAIMTSLNLFATRFDQVLSILEKRAPDLEYVLVDTPGQIEVFTWSASGAIITEALASSFPTLLVYVVDTPRTSSPTTFMSNMLYACSILYKTRLPIVLTFNKTDILSHTFAVDWMEDFEKFQEGLDRQGEDMGYMSTLIRSMSLVLDEFYKTLRKVGVSAASGDGIDVFFR 303
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BLAST of mRNA_Ecto-sp9_F_contig947.17616.1 vs.
Match: GPN-loop (GTPase n=12 Tax=Phytophthora TaxID=4783 RepID=D0NWP2_PHYIT)

HSP 1 Score: 341 bits (875), Expect = 1.170e-113
Identity = 166/240 (69.17%), Postives = 202/240 (84.17%), Query Frame = 3 
Query:  228 KPVVCIVMGMAGSGKTTLLQRLNLYTAEKGIKSYFINLDPAVKQVPFGASIDIRDTVNYKEVMSQYGLGPNGAITTSLNLFATRFDQVLDLLEKRSDDLEYVFIDTPGQIEVFTWSASGQIITETLASAFPTTLVYVVDTPRTANPTTFMSNMLYACSVLYKSRLPLVLALNKSDILSPKFALEWMSDFEKLQEALDTSGDESYMNSLNRSLALVLDEFYNALTAVGVSAASGDGMPALF 947
            KPV  +V+GMAGSGKTTL+QRL  Y  + G+++Y INLDPAV++  + A++DIRDTV+YK+VM++YGLGPNGAI TSLNLFATRFDQV+DLL KRS DL+Y  +DTPGQIE FTWSASGQIITE+LAS FP+ +VYVVDTPRTA+P TFMSNMLYACS+LYK +LP V+  NK D++   FA EWM+DFE  Q ALD   D+SYM SL+RSL+LVL+EFYN LT+VGVSAA+G+GMP LF
Sbjct:   37 KPVTVLVIGMAGSGKTTLMQRLAAYGVDSGLRNYIINLDPAVRKTGYTANVDIRDTVDYKQVMTEYGLGPNGAIMTSLNLFATRFDQVIDLLGKRSSDLDYAIVDTPGQIEAFTWSASGQIITESLASTFPSVIVYVVDTPRTASPNTFMSNMLYACSILYKLKLPFVVVFNKIDVMRHDFATEWMTDFEAFQTALDEVQDDSYMGSLSRSLSLVLEEFYNNLTSVGVSAATGEGMPELF 276
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BLAST of mRNA_Ecto-sp9_F_contig947.17616.1 vs.
Match: GPN-loop (GTPase n=3 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E5H0_BRELC)

HSP 1 Score: 339 bits (869), Expect = 9.810e-113
Identity = 165/240 (68.75%), Postives = 201/240 (83.75%), Query Frame = 3 
Query:  228 KPVVCIVMGMAGSGKTTLLQRLNLYTAEKGIKSYFINLDPAVKQVPFGASIDIRDTVNYKEVMSQYGLGPNGAITTSLNLFATRFDQVLDLLEKRSDDLEYVFIDTPGQIEVFTWSASGQIITETLASAFPTTLVYVVDTPRTANPTTFMSNMLYACSVLYKSRLPLVLALNKSDILSPKFALEWMSDFEKLQEALDTSGDESYMNSLNRSLALVLDEFYNALTAVGVSAASGDGMPALF 947
            KPV  +V+GMAGSGKTTL+QRL  Y  + G+++Y INLDPAV++  + A++DIRDTV+YK+VMS+YGLGPNGAI TSLNLFATRFDQV+DLL KRS +L+Y  +DTPGQIE FTWSASGQIITE+LAS FP+ +VYVVDTPRTANP TFMSNMLYACS+LYK +LP V+  NK D+L   FA+EWM+DFE  Q ALD   D++YM SL+RSL+LVL+EFYN LT VGVSAA+G+G+P  F
Sbjct:   36 KPVTILVIGMAGSGKTTLMQRLTAYGVDAGLRNYVINLDPAVRKTGYTANVDIRDTVDYKKVMSEYGLGPNGAIMTSLNLFATRFDQVVDLLAKRSSNLDYAIVDTPGQIEAFTWSASGQIITESLASTFPSIIVYVVDTPRTANPNTFMSNMLYACSILYKLKLPFVVVFNKIDVLRHDFAIEWMTDFEAFQTALDDVQDDNYMGSLSRSLSLVLEEFYNNLTCVGVSAATGEGIPEFF 275
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BLAST of mRNA_Ecto-sp9_F_contig947.17616.1 vs.
Match: GPN-loop (GTPase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C5B9_HYAAE)

HSP 1 Score: 338 bits (867), Expect = 1.240e-112
Identity = 165/240 (68.75%), Postives = 202/240 (84.17%), Query Frame = 3 
Query:  228 KPVVCIVMGMAGSGKTTLLQRLNLYTAEKGIKSYFINLDPAVKQVPFGASIDIRDTVNYKEVMSQYGLGPNGAITTSLNLFATRFDQVLDLLEKRSDDLEYVFIDTPGQIEVFTWSASGQIITETLASAFPTTLVYVVDTPRTANPTTFMSNMLYACSVLYKSRLPLVLALNKSDILSPKFALEWMSDFEKLQEALDTSGDESYMNSLNRSLALVLDEFYNALTAVGVSAASGDGMPALF 947
            KPV  +++GMAGSGKTTL+QRL +Y  + G+++Y INLDPAV++  + A+IDIRDTV+YK+VM +YGLGPNGAI TSLNLFATRFDQV+DLL KRS+ L+Y  +DTPGQIE FTWSASGQIITE+LAS FP+ +VYVVDTPRTA+P TFMSNMLYACS+LYK +LP V+  NK D+L   FA EWM+DFE  Q+ALD   D+SYM SL+RSL+LVL+EFYN LT+VGVSAA+G+GMP  F
Sbjct:   30 KPVTVLIIGMAGSGKTTLMQRLAVYGMDSGLRNYVINLDPAVRKTGYTANIDIRDTVDYKQVMKEYGLGPNGAIMTSLNLFATRFDQVIDLLAKRSNVLDYAIVDTPGQIEAFTWSASGQIITESLASTFPSVIVYVVDTPRTASPNTFMSNMLYACSILYKLKLPFVVVFNKIDVLRHDFATEWMTDFEAFQKALDDVQDDSYMGSLSRSLSLVLEEFYNNLTSVGVSAATGEGMPEFF 269
[Close]
BLAST of mRNA_Ecto-sp9_F_contig947.17616.1 vs.
Match: GPN-loop (GTPase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XLJ6_9STRA)

HSP 1 Score: 338 bits (868), Expect = 1.340e-112
Identity = 166/240 (69.17%), Postives = 202/240 (84.17%), Query Frame = 3 
Query:  228 KPVVCIVMGMAGSGKTTLLQRLNLYTAEKGIKSYFINLDPAVKQVPFGASIDIRDTVNYKEVMSQYGLGPNGAITTSLNLFATRFDQVLDLLEKRSDDLEYVFIDTPGQIEVFTWSASGQIITETLASAFPTTLVYVVDTPRTANPTTFMSNMLYACSVLYKSRLPLVLALNKSDILSPKFALEWMSDFEKLQEALDTSGDESYMNSLNRSLALVLDEFYNALTAVGVSAASGDGMPALF 947
            KPV  +V+GMAGSGKTTL+QR+  Y  E G+++Y +NLDPAV++  + A+IDIRDTV+YK+VM++YGLGPNGAI TSLNLFATRFDQV+DL+ KRSD ++Y  +DTPGQIE FTWSASGQIITE+LAS FP+ +VYVVDTPRTA+P TFMSNMLYACS+LYK RLP V+A NK D+L   FA EWM+DFE  Q ALD + DESYM SL+RSL+LVL+EFYN L +VGVSAA+G+GM  LF
Sbjct:   40 KPVTVMVIGMAGSGKTTLMQRIATYGLETGMRNYIVNLDPAVRKTGYTANIDIRDTVDYKQVMTEYGLGPNGAIMTSLNLFATRFDQVIDLIAKRSDSIDYAVVDTPGQIEAFTWSASGQIITESLASTFPSVIVYVVDTPRTASPNTFMSNMLYACSILYKLRLPFVVAFNKIDVLRHDFAQEWMTDFEAFQAALDQAQDESYMGSLSRSLSLVLEEFYNNLRSVGVSAATGEGMAELF 279
[Close]
BLAST of mRNA_Ecto-sp9_F_contig947.17616.1 vs.
Match: GPN-loop (GTPase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ATF5_PLAHL)

HSP 1 Score: 337 bits (865), Expect = 3.710e-112
Identity = 163/240 (67.92%), Postives = 202/240 (84.17%), Query Frame = 3 
Query:  228 KPVVCIVMGMAGSGKTTLLQRLNLYTAEKGIKSYFINLDPAVKQVPFGASIDIRDTVNYKEVMSQYGLGPNGAITTSLNLFATRFDQVLDLLEKRSDDLEYVFIDTPGQIEVFTWSASGQIITETLASAFPTTLVYVVDTPRTANPTTFMSNMLYACSVLYKSRLPLVLALNKSDILSPKFALEWMSDFEKLQEALDTSGDESYMNSLNRSLALVLDEFYNALTAVGVSAASGDGMPALF 947
            KPV  +V+GMAGSGKTTL+QRL  Y  + G+++Y INLDPAV++  + A++DIRDTV+YK+VM++YGLGPNGAI TSLNLFATRFDQV+DL+ KRS DL+Y  +DTPGQIE FTWSASGQIITE+LAS FP+ +VYVVDTPRTA+P TFMSNMLYACS+LYK +LP V+  NK D++   FA+EWM+DFE  Q ALD   D+SYM +L+RSL+LVL+EFYN LT+VGVSAA+G+GMP  F
Sbjct:   35 KPVTILVIGMAGSGKTTLMQRLAAYGVDSGLRNYVINLDPAVRKTGYTANVDIRDTVDYKKVMTEYGLGPNGAIMTSLNLFATRFDQVIDLVGKRSSDLDYAIVDTPGQIEAFTWSASGQIITESLASTFPSVIVYVVDTPRTASPNTFMSNMLYACSILYKLKLPFVVVFNKIDVMRHDFAVEWMTDFEAFQTALDEVQDDSYMGNLSRSLSLVLEEFYNNLTSVGVSAATGEGMPEFF 274
[Close]
BLAST of mRNA_Ecto-sp9_F_contig947.17616.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNL2_PYTOL)

HSP 1 Score: 337 bits (864), Expect = 6.410e-112
Identity = 162/240 (67.50%), Postives = 203/240 (84.58%), Query Frame = 3 
Query:  228 KPVVCIVMGMAGSGKTTLLQRLNLYTAEKGIKSYFINLDPAVKQVPFGASIDIRDTVNYKEVMSQYGLGPNGAITTSLNLFATRFDQVLDLLEKRSDDLEYVFIDTPGQIEVFTWSASGQIITETLASAFPTTLVYVVDTPRTANPTTFMSNMLYACSVLYKSRLPLVLALNKSDILSPKFALEWMSDFEKLQEALDTSGDESYMNSLNRSLALVLDEFYNALTAVGVSAASGDGMPALF 947
            KPV  +++GMAGSGKTTL+QR+  Y  E+G+++Y +NLDPAV++  +GA+IDIRDTV+YK+VM++YGLGPNGAI TSLNLFATRFDQV++L+ KRSD+L+Y  +DTPGQIE FTWSASG IITE+LAS FPT +VYVVDTPRTA+P TFMSNMLYACS+LYK RLP V+  NK+D+L   FA EWM+DFE  Q ALD   D+SYM++L+RSL+LVL+EFYN L +VGVSAA+G+GM   F
Sbjct:   40 KPVTMLIIGMAGSGKTTLMQRIATYGIERGLRNYVVNLDPAVRKTGYGANIDIRDTVDYKQVMTEYGLGPNGAIMTSLNLFATRFDQVVELISKRSDELDYAVVDTPGQIEAFTWSASGTIITESLASTFPTVIVYVVDTPRTASPNTFMSNMLYACSILYKLRLPFVVVFNKTDVLRHDFAQEWMTDFEAFQTALDQVQDDSYMSNLSRSLSLVLEEFYNNLRSVGVSAATGEGMDKFF 279
[Close]
BLAST of mRNA_Ecto-sp9_F_contig947.17616.1 vs.
Match: GPN-loop (GTPase n=5 Tax=Phytophthora TaxID=4783 RepID=A0A421F4K2_9STRA)

HSP 1 Score: 336 bits (861), Expect = 1.830e-111
Identity = 163/240 (67.92%), Postives = 201/240 (83.75%), Query Frame = 3 
Query:  228 KPVVCIVMGMAGSGKTTLLQRLNLYTAEKGIKSYFINLDPAVKQVPFGASIDIRDTVNYKEVMSQYGLGPNGAITTSLNLFATRFDQVLDLLEKRSDDLEYVFIDTPGQIEVFTWSASGQIITETLASAFPTTLVYVVDTPRTANPTTFMSNMLYACSVLYKSRLPLVLALNKSDILSPKFALEWMSDFEKLQEALDTSGDESYMNSLNRSLALVLDEFYNALTAVGVSAASGDGMPALF 947
            KPV  +V+GMAGSGKTTL+QRL  Y  + G+++Y +NLDPAV++  + A++DIRDTV+YK+VM++YGLGPNGAI TSLNLFATRFDQV+DLL KRS DL+Y  +DTPGQIE FTWSASGQIITE+LAS FP+ +VYVVDTPRTA+P TFMSNMLYACS+LYK +LP V+A NK D++   FA EWM+DFE  Q ALD   D+SYM SL+RSL+LVL+EFYN L++VGVSAA+G+GM   F
Sbjct:   39 KPVSVLVIGMAGSGKTTLMQRLAAYGVDNGLRNYIVNLDPAVRKTGYTANVDIRDTVDYKQVMTEYGLGPNGAIMTSLNLFATRFDQVIDLLGKRSSDLDYAIVDTPGQIEAFTWSASGQIITESLASTFPSVIVYVVDTPRTASPNTFMSNMLYACSILYKLKLPFVVAFNKIDVMRHDFATEWMTDFESFQTALDQVQDDSYMGSLSRSLSLVLEEFYNNLSSVGVSAATGEGMAEFF 278
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig947.17616.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
GPN-loop4.730e-163100.00GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 R... [more]
GPN-loop1.440e-12576.23GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=... [more]
GPN-loop1.540e-11873.55GTPase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=... [more]
GPN-loop1.170e-11369.17GTPase n=12 Tax=Phytophthora TaxID=4783 RepID=D0NW... [more]
GPN-loop9.810e-11368.75GTPase n=3 Tax=Bremia lactucae TaxID=4779 RepID=A0... [more]
GPN-loop1.240e-11268.75GTPase n=1 Tax=Hyaloperonospora arabidopsidis (str... [more]
GPN-loop1.340e-11269.17GTPase n=1 Tax=Pythium brassicum TaxID=1485010 Rep... [more]
GPN-loop3.710e-11267.92GTPase n=1 Tax=Plasmopara halstedii TaxID=4781 Rep... [more]
Uncharacterized6.410e-11267.50protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
GPN-loop1.830e-11167.92GTPase n=5 Tax=Phytophthora TaxID=4783 RepID=A0A42... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig947contigEcto-sp9_F_contig947:24322..28404 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score472.6
Seed ortholog evalue1.3e-130
Seed eggNOG ortholog2880.D8LKI4
Preferred nameGPN1
KEGG koko:K00700,ko:K06883,ko:K19513
KEGG ReactionR02110
KEGG Pathwayko00500,ko01100,ko01110,map00500,map01100,map01110
KEGG ModuleM00565
GOsGO:0000003,GO:0000070,GO:0000278,GO:0000280,GO:0000819,GO:0003006,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005829,GO:0005856,GO:0005874,GO:0006810,GO:0006913,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0007064,GO:0007275,GO:0008150,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0010154,GO:0015630,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022402,GO:0022414,GO:0022607,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0034622,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0046907,GO:0048285,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0051169,GO:0051179,GO:0051234,GO:0051276,GO:0051301,GO:0051641,GO:0051649,GO:0061458,GO:0065003,GO:0070013,GO:0071840,GO:0098813,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0140014,GO:1903047,GO:1990114
EggNOG free text desc.GTPase activity
EggNOG OGsKOG1532@1,KOG1532@2759
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-16_003070.1
EC2.4.1.18
COG Functional cat.KLT
CAZyCBM48,GH13
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03029,ko04131,ko04147
Hectar predicted targeting categoryother localisation
Exons6
Model size951
Cds size873
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931030.3651085-UTR-Ecto-sp9_F_contig947:24321..243981622931030.3651085-UTR-Ecto-sp9_F_contig947:24321..24398Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig947 24322..24398 +
1692279000.5293572-UTR-Ecto-sp9_F_contig947:24321..243981692279000.5293572-UTR-Ecto-sp9_F_contig947:24321..24398Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig947 24322..24398 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931030.3823864-CDS-Ecto-sp9_F_contig947:24398..244831622931030.3823864-CDS-Ecto-sp9_F_contig947:24398..24483Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig947 24399..24483 +
1692279000.541527-CDS-Ecto-sp9_F_contig947:24398..244831692279000.541527-CDS-Ecto-sp9_F_contig947:24398..24483Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig947 24399..24483 +
1622931030.3965893-CDS-Ecto-sp9_F_contig947:24882..251301622931030.3965893-CDS-Ecto-sp9_F_contig947:24882..25130Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig947 24883..25130 +
1692279000.5584407-CDS-Ecto-sp9_F_contig947:24882..251301692279000.5584407-CDS-Ecto-sp9_F_contig947:24882..25130Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig947 24883..25130 +
1622931030.4124575-CDS-Ecto-sp9_F_contig947:25645..257611622931030.4124575-CDS-Ecto-sp9_F_contig947:25645..25761Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig947 25646..25761 +
1692279000.5709903-CDS-Ecto-sp9_F_contig947:25645..257611692279000.5709903-CDS-Ecto-sp9_F_contig947:25645..25761Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig947 25646..25761 +
1622931030.4294267-CDS-Ecto-sp9_F_contig947:26214..263111622931030.4294267-CDS-Ecto-sp9_F_contig947:26214..26311Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig947 26215..26311 +
1692279000.581327-CDS-Ecto-sp9_F_contig947:26214..263111692279000.581327-CDS-Ecto-sp9_F_contig947:26214..26311Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig947 26215..26311 +
1622931030.4452817-CDS-Ecto-sp9_F_contig947:27692..278151622931030.4452817-CDS-Ecto-sp9_F_contig947:27692..27815Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig947 27693..27815 +
1692279000.6000412-CDS-Ecto-sp9_F_contig947:27692..278151692279000.6000412-CDS-Ecto-sp9_F_contig947:27692..27815Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig947 27693..27815 +
1622931030.4614804-CDS-Ecto-sp9_F_contig947:28200..284041622931030.4614804-CDS-Ecto-sp9_F_contig947:28200..28404Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig947 28201..28404 +
1692279000.6102803-CDS-Ecto-sp9_F_contig947:28200..284041692279000.6102803-CDS-Ecto-sp9_F_contig947:28200..28404Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig947 28201..28404 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig947.17616.1prot_Ecto-sp9_F_contig947.17616.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig947 24399..28404 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig947.17616.1

>prot_Ecto-sp9_F_contig947.17616.1 ID=prot_Ecto-sp9_F_contig947.17616.1|Name=mRNA_Ecto-sp9_F_contig947.17616.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=291bp
MEFLQKVEEEARRGGDDGASPAAASDPTGTGGGSSSATAAGGKGEASTKK
KPVVCIVMGMAGSGKTTLLQRLNLYTAEKGIKSYFINLDPAVKQVPFGAS
IDIRDTVNYKEVMSQYGLGPNGAITTSLNLFATRFDQVLDLLEKRSDDLE
YVFIDTPGQIEVFTWSASGQIITETLASAFPTTLVYVVDTPRTANPTTFM
SNMLYACSVLYKSRLPLVLALNKSDILSPKFALEWMSDFEKLQEALDTSG
DESYMNSLNRSLALVLDEFYNALTAVGVSAASGDGMPALFK
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mRNA from alignment at Ecto-sp9_F_contig947:24322..28404+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig947.17616.1 ID=mRNA_Ecto-sp9_F_contig947.17616.1|Name=mRNA_Ecto-sp9_F_contig947.17616.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=4083bp|location=Sequence derived from alignment at Ecto-sp9_F_contig947:24322..28404+ (Ectocarpus species9 EcSCA_722f female)
AAGTGTGCGCGCGAGTTGCGTGTTGTGCTGTCTCGCTTGACTGAACGAAC
AGCAGTGGTGCGTGAGTCTTTGGGGCCATGGAGTTTTTGCAAAAGGTGGA
GGAAGAAGCTCGAAGGGGCGGAGATGATGGAGCATCCCCTGCTGCCGCAT
CAGATCCCACAGGTGCAGCAGTATCCCTCCCACCACTCTTGTGTGGTGTC
GCGGTACAGGGCACGAGGGGTACAGCGGCGCAGTAAACAAATGCCACACC
GAGCGAACCTGTAGTGTGTTAATCTTGCTGATTTTGTGCTAATGCCGAGA
ACTACAGTGACATTGGGACACCCGTCCTGTGTGCTCTTGGTGTAGACTAC
AGCGTAGTACATGGAAAGAGCTGGTGCGCGCAGCTCGCAGCAGCTGTGAC
CCCGCAGCAAGCAGTGCAGGATATAGGATACAATATACACCCATGACTAC
CAGCAAGTCAAGATGAAGTTTCGGTCCCTACGACGTCCTGGTCCTGCCTT
CTCTCTCACTTTCCCTCTTGTTCACTCTGAACATCCACCCCCCCCCTTTT
ACTTGTCGAAGGCACGGGGGGCGGCAGCAGCAGCGCCACCGCCGCTGGCG
GGAAGGGGGAGGCCAGCACAAAGAAGAAGCCCGTGGTATGCATTGTCATG
GGCATGGCCGGGAGCGGGAAGACCACCCTGCTGCAGAGGCTGAACCTCTA
CACGGCGGAGAAGGGCATCAAGAGCTACTTCATCAACCTGGACCCGGCCG
TCAAGCAGGTACCCTTCGGAGCCAGCATCGACATCCGAGACACTGTCAAT
TACAAAGAGGTGAGTTATGACCCTCAATGAAGATCGTCAAGCAATGACAG
CAGGAGGCAGTCTGAGAAAGGAAGAAGTCTAAGAGAGGAGGCTGTCTGAG
GGGTAGCCTTGAGAATGTTGTTCCGTACTACTATACCTGTGGCGTTTCTT
TCTGAAACGGGTTTCGCGATCCTGCGACACTAAACCGTTCAAAATCCGTG
TATGGTTATATACGTCAGGGTGCGGCGTATCTCCGTTGAGACCACTTGTG
GTGGATTCACGGTTGTAAACACTAAAGAGTACCTTCATACACGAATTCTC
TACAACAGTACCAGGATTGCTTGGAGAAAAAGAATACAATGGCTGAACCC
CTGTGCCATACCAAGAATGAAACATGTACCATCGACCCCGAGCGCCTCCC
CCCTCGGGCGTGGTCTGTCTCTTTTCCTTCTGTGGCGTTGTTCGGTCGCG
GAAATCGGGTGACCGGGTCTGCAATACGGCGATCTAACGCGCTGGGATGG
TGCTACAACGCGAAAACGTGAAAGGTCATGAGCCAGTACGGTCTCGGGCC
AAACGGGGCGATCACCACCTCCCTCAACCTCTTCGCGACGAGGTTCGACC
AGGTCCTGGACCTCCTCGAGAAGCGATCGGATGACCTTGAGTGAGTGAAG
TGCGTTTACGAGGGCTGCCTTGGTACATATGGAGTACAATTTATTGGTTT
GGAAGGACCTTAGGGCAACATTGAGGTTTTGGGACAAGCATCGCCTGGTG
GGGAGTTCTGTAGGCGCGGGTGGGGCGCATGTTTCTCGAATGTACTCCGG
ACGTTGGTACTATCCTCGCTCTCTTGCTCCTTGTACAACGCAACATTGCT
CCGTATTGGCGTATGGTGACTTGAGCGCTTGAGCGTGTCAGTTCGTCGTG
AATGCCTGAGGTGGAGCGAAGGCACCAATATACCCTCAGGAACCAATCGG
CAGCGTGGCTAAATGAGACAAGCTTGGGAAGGAGAGCGTCCGGCTGTCCA
GTGCTCTATTTGTCTTGATCCGCTCACCCCCTGCCTGCTTCTGCCCCATG
GCCCTCCTTCAAACGCACGACATGATCCACGGGGACCCCGCAGGTACGTG
TTCATCGACACCCCGGGGCAGATCGAGGTGTTCACTTGGAGCGCGTCTGG
GCAAATCATCACGGAGACGCTGGCGTCCGCTTTCCCCACCGTGAGTGAAC
GGCGTTAAGACCCCACTTGCTTCTTAGATATTGGTGACCGTAGTAACGCA
TGTTGGTGCGGCATGAGAAATGACAACGCGGTAATACTAATAGGGAGGGG
TGATCAACCGCGGGGTATGACTCAATACCTGACCGTAGTCTATCTGCGGT
TTTGTGCGAGGTGCGAGACACGCTGCTTCCAGGAAGCAGCAACGCAACAA
ACCAGAAAGCGGAATTCATTACTCGCGGAATATATTTGTTCGAACGGATC
TTCCAAGACTGGTGCATCCGCCCCCGCTGGAAGTTTTTTAACACATCAAC
AACAGCGGAGGAACCCACACACATGCTCGCCCTCTGCTACAGCAGTACCG
CCAAACGATTGGCACCTGACAGCACTGTCGCCGACAAGAATGGACAGTGA
TAGCTGACACGAATGCACTCCTGTGGTACTGCTGCTGCTGCTGTAATGGT
ATTGACTCCCGTCTAACTTATTTCACCCATCATGTATGTTGAGACTTTCC
AACGGCGAGAAGAGCGCGTCGTGCGCATCGTCCAGAGTCCTTGTTGTGTA
TCCAGAGGGACGGCACCACGTGGGTGTGTGTGTAGCCAGAGAGGGGGCGC
CCAGGTTTGCTATCACCGCTGTGCTTTCACATGGAAGGGATTGGGCCACG
GCGGATGTGTGTGTGTTTCTATGGATGTGCGAGACATACATAGCTGCGTG
TCACCTCTCTCTGTGTCTCCTACTAGATAGCTGGCTTTGTACATGGATCG
ATCTCCAATAGATTGTGTTTCGCCTCCTCGGCAACTCCGGGGGTTGGGGT
GTGGTATCTCCTACGAATTTTGGGCACAAACTCCTGTGTAGCACGGCCAT
CTGTTGCCGGAGCATGACCAAACCGGTGTGACGGAGAGTGCCCTAGTCGT
CTCCCTCCTCAGAAGGAAACAGATCGTCCATCGGTGTCGTGCAGGTCTTG
GTTAGGTCCCAAAGGTGGGTTATTTAGGCTTGCCGAAAATCAAACTGGGC
CCCTGCATCACGATTGGAGCCAGATCGATGTTTAGAGATGTTTTTCCTTC
AGGGAAAAATCGCGACTTCGCGGCGATGCGGCTCATTAAATTTTGAGCGT
TGTTTTTGCGGGGAATAGCAAAAGTGCGGATATTTCATCACACTACTAAA
TAACATGTTGCATTGATTTTGCCCGAAGACCAATGCTCGTGTCGATGAGC
GGTAACAGTTTTTTTACCACAGGCTGCTTCTTGCCATTGCAGCCCCCACA
CGCATGCACGTGCGTTTTCCTCTACTGTGAGTTCAGTTTAGGCGTATTCG
TCCATGCATGCCGTGTTCTCCAGCTTGAACAGCGCTTCCTCGTACCCGCC
TTCTGTTTTTTTCTCCTTCAGACTCTGGTGTACGTCGTCGACACGCCTCG
GACTGCAAACCCTACGACGTTTATGTCCAACATGCTGTACGCATGCAGCG
TGCTGTACAAATCGCGGTTACCGCTTGTGCTGGCTCTCAACAAGGTGCGC
CCGCTTGGCGTCGAGACGTGTACGTCATCGATCACGATTCGTTGCTGCTA
AGAGACTCGGACGGATTTTTGTGGTCTCACGCCGCCGATTCTTTGCGGTT
GCACGTTTTACGAACGGAGGGCGTAGAGTGATTTGCACAGAGATTTTTTG
GGAAACCCTCTCTGTTTATCGTCCAGCGCTGCGCGGCTGGGCCTGTTGGT
TGCACGAACCTACCACCACCACCTCTCCCCACTCTCCCGGAGCCCCCACC
CCCCTATACCAGCGTACCGGAGTCTCCACCCCCGAATACTAGAGTAACGG
AATCCCTTACATACTAGAGTACCACACTGCCTGATCGCGGATTACGGGCT
GGTCGTTCTTGGGCTTGCTTGGCCACCAGTCCGACATCCTGTCCCCGAAG
TTCGCTTTGGAGTGGATGTCGGACTTCGAGAAGCTGCAGGAGGCCCTGGA
CACCTCCGGCGACGAGAGCTACATGAACAGCCTCAACCGCTCCCTCGCGC
TCGTGCTCGACGAGTTCTACAACGCGCTCACGGCGGTCGGGGTGTCGGCG
GCTAGCGGCGACGGCATGCCGGCTCTTTTCAAG
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig947:24322..28404+

>mRNA_Ecto-sp9_F_contig947.17616.1 ID=mRNA_Ecto-sp9_F_contig947.17616.1|Name=mRNA_Ecto-sp9_F_contig947.17616.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1746bp|location=Sequence derived from alignment at Ecto-sp9_F_contig947:24322..28404+ (Ectocarpus species9 EcSCA_722f female)
ATGGAGTTTTTGCAAAAGGTGGAGGAAGAAGCTCGAAGGGGCGGAGATGA
TGGAGCATCCCCTGCTGCCGCATCAGATCCCACAGATGGAGTTTTTGCAA
AAGGTGGAGGAAGAAGCTCGAAGGGGCGGAGATGATGGAGCATCCCCTGC
TGCCGCATCAGATCCCACAGGCACGGGGGGCGGCAGCAGCAGCGCCACCG
CCGCTGGCGGGAAGGGGGAGGCCAGCACAAAGAAGAAGCCCGTGGTATGC
ATTGTCATGGGCATGGCCGGGAGCGGGAAGACCACCCTGCTGCAGAGGCT
GAACCTCTACACGGCGGAGAAGGGCATCAAGAGCTACTTCATCAACCTGG
ACCCGGCCGTCAAGCAGGTACCCTTCGGAGCCAGCATCGACATCCGAGAC
ACTGTCAATTACAAAGAGGCACGGGGGGCGGCAGCAGCAGCGCCACCGCC
GCTGGCGGGAAGGGGGAGGCCAGCACAAAGAAGAAGCCCGTGGTATGCAT
TGTCATGGGCATGGCCGGGAGCGGGAAGACCACCCTGCTGCAGAGGCTGA
ACCTCTACACGGCGGAGAAGGGCATCAAGAGCTACTTCATCAACCTGGAC
CCGGCCGTCAAGCAGGTACCCTTCGGAGCCAGCATCGACATCCGAGACAC
TGTCAATTACAAAGAGGTCATGAGCCAGTACGGTCTCGGGCCAAACGGGG
CGATCACCACCTCCCTCAACCTCTTCGCGACGAGGTTCGACCAGGTCCTG
GACCTCCTCGAGAAGCGATCGGATGACCTTGAGTCATGAGCCAGTACGGT
CTCGGGCCAAACGGGGCGATCACCACCTCCCTCAACCTCTTCGCGACGAG
GTTCGACCAGGTCCTGGACCTCCTCGAGAAGCGATCGGATGACCTTGAGT
ACGTGTTCATCGACACCCCGGGGCAGATCGAGGTGTTCACTTGGAGCGCG
TCTGGGCAAATCATCACGGAGACGCTGGCGTCCGCTTTCCCCACCGTACG
TGTTCATCGACACCCCGGGGCAGATCGAGGTGTTCACTTGGAGCGCGTCT
GGGCAAATCATCACGGAGACGCTGGCGTCCGCTTTCCCCACCACTCTGGT
GTACGTCGTCGACACGCCTCGGACTGCAAACCCTACGACGTTTATGTCCA
ACATGCTGTACGCATGCAGCGTGCTGTACAAATCGCGGTTACCGCTTGTG
CTGGCTCTCAACAAGACTCTGGTGTACGTCGTCGACACGCCTCGGACTGC
AAACCCTACGACGTTTATGTCCAACATGCTGTACGCATGCAGCGTGCTGT
ACAAATCGCGGTTACCGCTTGTGCTGGCTCTCAACAAGTCCGACATCCTG
TCCCCGAAGTTCGCTTTGGAGTGGATGTCGGACTTCGAGAAGCTGCAGGA
GGCCCTGGACACCTCCGGCGACGAGAGCTACATGAACAGCCTCAACCGCT
CCCTCGCGCTCGTGCTCGACGAGTTCTACAACGCGCTCACGGCGGTCGGG
GTGTCGGCGGCTAGCGGCGACGGCATGCCGGCTCTTTTCAAGTCCGACAT
CCTGTCCCCGAAGTTCGCTTTGGAGTGGATGTCGGACTTCGAGAAGCTGC
AGGAGGCCCTGGACACCTCCGGCGACGAGAGCTACATGAACAGCCTCAAC
CGCTCCCTCGCGCTCGTGCTCGACGAGTTCTACAACGCGCTCACGGCGGT
CGGGGTGTCGGCGGCTAGCGGCGACGGCATGCCGGCTCTTTTCAAG
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