mRNA_Ecto-sp9_F_contig945.17600.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp9_F_contig945.17600.1
Unique Name	mRNA_Ecto-sp9_F_contig945.17600.1
Type	mRNA
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)

Homology

[Close]

BLAST of mRNA_Ecto-sp9_F_contig945.17600.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LRF5_9PHAE)

HSP 1 Score: 1208 bits (3125), Expect = 0.000e+0
Identity = 680/838 (81.15%), Postives = 710/838 (84.73%), Query Frame = 1

Query:   52 MVRRRQRRRDHASPAASLASLAAYAILLYFSISPTVAAAASVAHAPRRQKLQPLDETPSGGXXXXIGGKGWNTARNSWIDADEGELEAEEQNARFSNRDGEGACSSNRGGDG-KGVGSNGKLWDGQAWGVPAPALEPSCHLLDRPPDAYPGAIKTVGGTMPESRHDSSWCAGDEDCVLPPATGAGNKEEAVRGGGVGGSQEGTXXXXXXXXXXXXXXXXXXXXXRRGESSIPGDAGRVPDDEARALSSGEGPPRRDGRFTTTAAASLADFTAAEPKEQQSRLVDGYATIATAAYPQSKPPSTTEQSSLPTAARPTVAAERPPQQEQRGPLVKGQGANTNTRDGDTGGVKHPGATAVVHGDRRTGATDEGARAEEPTPGRWNRHANVGPTGGSKGKXXXXXXXXXXXXXXXXXSEKRGGEGRVLETIIVGGKAWPSWRTFACILLLSALVLGTFLRGDMPHWLPFFGGDRRQRWAIDLDSAIAHARSRAGSFCSGRASVFSGDPVDDSDLPGMISDSEEGEDGNGDQGVVPGDDDGEAPLMWDRRPKPDDYLVFHPVLGVVPAGVVRAWGGDGRGGWSGVRAEAAGARVGGTNGGTGGKGCGCSSKSSSPRGALAPAAVSSKAIAAGGVVKGKQLPPDEWPEWLAARRGTAAAAVAEVEAGKEVARAATIRPAAGAVPTEEDAIAAAPAVVEGREANDGREVQRRGDNERTATATEARPSAASRGNAGVGVGQTIGPHQQQQPLGDASRTRPAAIGLQFGDGCVN-GGGGDSSTEGPRPLGSEDGDALSFVGXXXXXXAGSCCPSEDNSIDVRAGDFSSRRVSLSAEQPPAMTAGYRVS 2559
            MVRRR+     ASPAASLASLAAYAILL FSISPTVAAAA+VAHAPRRQKLQP+ ETP GG    IGGKGW+T RNSWIDADEGELEAEE+NAR  N D EGA S+N GGDG KGVG NGKLWDGQA G PA ALEPSC+LLDRP DAYPG +KT+GGT+P    DSSWCAGDEDCV+PPATGAG                  XXXXXXXXXXXXXXX        GE SI GDAGRVPD EARALS GEGPPRRDGRFTTTAAASLADFT  EPKEQQSRLVDGYATIATAAYPQS+PP+TTEQSSLP AARPTVAAERPPQQEQRGPLVKGQGAN NTRD DTGGVKHPGATAVVHG+RRTGA+DEGARAEEPTPGRWNR+ANVGPTGGSK +                 SE RGGEG  LET IVGGK+WPSWRTFACILLLSAL L TFLRG MPHWLPFFGG RRQRWA DLDSAIAHARSRAGSFCSGRASVFSGDPVDDSDLPG+ISDSEEGEDGN  QGVVPGDDDGEAPLMWDRRPKPDDYL+FHPVLGVVPAGVVRAWGGDG GGW GVRAEAAGAR GGTNGGT GKGCGCSSKSSSPRGA APAA+SSKA A GGVVKGKQLPPDEWPEWLAARR TAAAAVA+VEAGK+   AATIRPAA AVPTE DAI  APA V+GRE NDGREVQRRGDNERTATATEARP+AAS G   VGVGQT+ PH QQQ LG+ASRTRPAAIGLQF DGCVN GGGGDSSTEGPRPLGS+ GDALSFVG      AGS CPSEDN+IDVRAGDFS+RRVSLSAEQPPAMTAGYRVS
Sbjct:    1 MVRRRRXXXXXASPAASLASLAAYAILLSFSISPTVAAAAAVAHAPRRQKLQPIHETPPGGGDGGIGGKGWHTVRNSWIDADEGELEAEERNARLINGDSEGAFSANGGGDGNKGVGRNGKLWDGQASGAPALALEPSCNLLDRPSDAYPGVVKTIGGTVPGILQDSSWCAGDEDCVVPPATGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEAAACL-GEPSISGDAGRVPDVEARALSGGEGPPRRDGRFTTTAAASLADFTTTEPKEQQSRLVDGYATIATAAYPQSRPPTTTEQSSLP-AARPTVAAERPPQQEQRGPLVKGQGANINTRDRDTGGVKHPGATAVVHGERRTGASDEGARAEEPTPGRWNRNANVGPTGGSKEQGRREIELSAGTGGRGRRSENRGGEGGGLETGIVGGKSWPSWRTFACILLLSALGLSTFLRGSMPHWLPFFGGGRRQRWAKDLDSAIAHARSRAGSFCSGRASVFSGDPVDDSDLPGLISDSEEGEDGNDTQGVVPGDDDGEAPLMWDRRPKPDDYLIFHPVLGVVPAGVVRAWGGDGCGGWGGVRAEAAGARAGGTNGGTXGKGCGCSSKSSSPRGARAPAAMSSKATAVGGVVKGKQLPPDEWPEWLAARRATAAAAVADVEAGKKGVGAATIRPAAEAVPTEADAITTAPAAVQGREVNDGREVQRRGDNERTATATEARPAAASGGKTVVGVGQTVDPHHQQQALGNASRTRPAAIGLQFEDGCVNDGGGGDSSTEGPRPLGSDGGDALSFVGGGGGS-AGSYCPSEDNNIDVRAGDFSARRVSLSAEQPPAMTAGYRVS 835

[Close]

BLAST of mRNA_Ecto-sp9_F_contig945.17600.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDJ6_ECTSI)

HSP 1 Score: 1018 bits (2631), Expect = 0.000e+0
Identity = 560/645 (86.82%), Postives = 577/645 (89.46%), Query Frame = 1

Query:   52 MVRRRQRRRDHASPAASLASLAAYAILLYFSISPTVAAAASV-AHAPRRQKLQPLDETPSGGXXXXIGGKGWNTARNSWIDADEGELEAEEQNARFSNRDGEGACSSNRGGDG-KGVGSNGKLWDGQAWGVPAPALEPSCHLLDRPPDAYPGAIKTVGGTMPESRHDSSWCAGDEDCVLPPATGAGNKEEAVRGGGVGGSQEGTXXXXXXXXXXXXXXXXXXXXXRRGESSIPGDAGRVPDDEARALSSGEGPPRRDGRFTTTAAASLADFTAAEPKEQQSRLVDGYATIATAAYPQSKPPSTTEQSSLPTAARPTVAAERPPQQEQRGPLVKGQGANTNTRDGDTGGVKHPGATAVVHGDRRTGATDEGARAEEPTPGRWNRHANVGPTGGSKGKXXXXXXXXXXXXXXXXXSEKRGGEGRVLETIIVGGKAWPSWRTFACILLLSALVLGTFLRGDMPHWLPFFGGDRRQRWAIDLDSAIAHARSRAGSFCSGRASVFSGDPVDDSDLPGMISDSEEGEDGNGDQGVVPGDDDGEAPLMWDRRPKPDDYLVFHPVLGVVPAGVVRAWGGDGRGGWSGVRAEAAGARVGGTNGGTGGKGCGCSSKSSSPRGALAPAAVSSKAIAAGGVVKGKQLPPDEWPEWLA 1980
            MVRRR++RRDHASPAASLASL AYAILL FSISPTVAAA    AHAPRRQKLQP+DETPSGGXXXXIGGKGW+TAR+SWIDADEGELEAEE+N+R  N DGEGACS+N GG+G KGV SNGK WDGQAWGVPAPALEPSCHL DR  DAYPGA+KT+GGT+P+   DSSWCAG EDCVLPPATGAGNK+EAVRGGGVGGSQEGT       XXXXXXXXXX     RGESSIPGDAGRVPDDEARA SSGEGPPRRDGRFTTTAAASLADFT A PKEQQSRLVDGYATIATAAYPQS+PPSTTEQSSLPT ARPTVA ERPPQQEQRGPLVKGQGANTNTRD DTGGVKHPGATAVVHGD RTGATDEGARAEEPTPGRWNRHA VGPTGGSKGK         XXXXXXXX         VLET IVGGKAWPSWR FACILLLSALVLGTFLRG +PHWLPFFGGDRRQRWAIDLDSAIAHARSRAGSFCSGRASVFSGDPVDDSDLP +ISDSEEGEDGNGDQGVVPGDDDGE PLMWDRRPKPDDYLVFHPVLGVVPAGVVRAWGGDG GGW GVRAEAAGARVGGTNGGTGGKGCGCSSKSSSPR ALAPAAVSSKAIA  GVVKGKQLPPDEWPEWLA
Sbjct:    1 MVRRRRKRRDHASPAASLASLTAYAILLSFSISPTVAAAXXXXAHAPRRQKLQPIDETPSGGXXXXIGGKGWHTARSSWIDADEGELEAEERNSRCINGDGEGACSANGGGNGNKGVRSNGKPWDGQAWGVPAPALEPSCHLSDRSSDAYPGAVKTIGGTVPDILQDSSWCAGGEDCVLPPATGAGNKKEAVRGGGVGGSQEGTGSCIDAAXXXXXXXXXXEAAACRGESSIPGDAGRVPDDEARASSSGEGPPRRDGRFTTTAAASLADFTTAGPKEQQSRLVDGYATIATAAYPQSRPPSTTEQSSLPTEARPTVATERPPQQEQRGPLVKGQGANTNTRDRDTGGVKHPGATAVVHGDGRTGATDEGARAEEPTPGRWNRHAKVGPTGGSKGKGRRERELPAXXXXXXXXXXXXXXXXGVLETAIVGGKAWPSWRAFACILLLSALVLGTFLRGSIPHWLPFFGGDRRQRWAIDLDSAIAHARSRAGSFCSGRASVFSGDPVDDSDLPDLISDSEEGEDGNGDQGVVPGDDDGETPLMWDRRPKPDDYLVFHPVLGVVPAGVVRAWGGDGCGGWGGVRAEAAGARVGGTNGGTGGKGCGCSSKSSSPRSALAPAAVSSKAIAVAGVVKGKQLPPDEWPEWLA 645

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig945.17600.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig945.17600.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
Uncharacterized	0.000e+0	81.15	protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=...	[more]
Uncharacterized	0.000e+0	86.82	protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig945	contig	Ecto-sp9_F_contig945:16807..21204 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Properties


Property Name	Value
Hectar predicted targeting category	signal peptide
Ec32 ortholog description	hypothetical protein
Ec32 ortholog	Ec-15_000310.1
Exons	2
Model size	3946
Cds size	2511
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig945.17600.1	prot_Ecto-sp9_F_contig945.17600.1	Ectocarpus species9 EcSCA_722f female	polypeptide	Ecto-sp9_F_contig945 16858..19820 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622931027.9337-UTR-Ecto-sp9_F_contig945:16806..16857	1622931027.9337-UTR-Ecto-sp9_F_contig945:16806..16857	Ectocarpus species9 EcSCA_722f female	UTR	Ecto-sp9_F_contig945 16807..16857 +
1692278999.313865-UTR-Ecto-sp9_F_contig945:16806..16857	1692278999.313865-UTR-Ecto-sp9_F_contig945:16806..16857	Ectocarpus species9 EcSCA_722f female	UTR	Ecto-sp9_F_contig945 16807..16857 +
1622931027.9955952-UTR-Ecto-sp9_F_contig945:19820..21204	1622931027.9955952-UTR-Ecto-sp9_F_contig945:19820..21204	Ectocarpus species9 EcSCA_722f female	UTR	Ecto-sp9_F_contig945 19821..21204 +
1692278999.357068-UTR-Ecto-sp9_F_contig945:19820..21204	1692278999.357068-UTR-Ecto-sp9_F_contig945:19820..21204	Ectocarpus species9 EcSCA_722f female	UTR	Ecto-sp9_F_contig945 19821..21204 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622931027.9534125-CDS-Ecto-sp9_F_contig945:16857..18224	1622931027.9534125-CDS-Ecto-sp9_F_contig945:16857..18224	Ectocarpus species9 EcSCA_722f female	CDS	Ecto-sp9_F_contig945 16858..18224 +
1692278999.323866-CDS-Ecto-sp9_F_contig945:16857..18224	1692278999.323866-CDS-Ecto-sp9_F_contig945:16857..18224	Ectocarpus species9 EcSCA_722f female	CDS	Ecto-sp9_F_contig945 16858..18224 +
1622931027.970081-CDS-Ecto-sp9_F_contig945:18676..19820	1622931027.970081-CDS-Ecto-sp9_F_contig945:18676..19820	Ectocarpus species9 EcSCA_722f female	CDS	Ecto-sp9_F_contig945 18677..19820 +
1692278999.3359861-CDS-Ecto-sp9_F_contig945:18676..19820	1692278999.3359861-CDS-Ecto-sp9_F_contig945:18676..19820	Ectocarpus species9 EcSCA_722f female	CDS	Ecto-sp9_F_contig945 18677..19820 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp9_F_contig945:16807..21204+
coding sequence from alignment at Ecto-sp9_F_contig945:16807..21204+

protein sequence of mRNA_Ecto-sp9_F_contig945.17600.1

>prot_Ecto-sp9_F_contig945.17600.1 ID=prot_Ecto-sp9_F_contig945.17600.1|Name=mRNA_Ecto-sp9_F_contig945.17600.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=837bp
MVRRRQRRRDHASPAASLASLAAYAILLYFSISPTVAAAASVAHAPRRQK
LQPLDETPSGGGGGGIGGKGWNTARNSWIDADEGELEAEEQNARFSNRDG
EGACSSNRGGDGKGVGSNGKLWDGQAWGVPAPALEPSCHLLDRPPDAYPG
AIKTVGGTMPESRHDSSWCAGDEDCVLPPATGAGNKEEAVRGGGVGGSQE
GTGSCIAAAGAAAGGGNSGEAAARRGESSIPGDAGRVPDDEARALSSGEG
PPRRDGRFTTTAAASLADFTAAEPKEQQSRLVDGYATIATAAYPQSKPPS
TTEQSSLPTAARPTVAAERPPQQEQRGPLVKGQGANTNTRDGDTGGVKHP
GATAVVHGDRRTGATDEGARAEEPTPGRWNRHANVGPTGGSKGKGRRERE
LPAGTGGGGSGSEKRGGEGRVLETIIVGGKAWPSWRTFACILLLSALVLG
TFLRGDMPHWLPFFGGDRRQRWAIDLDSAIAHARSRAGSFCSGRASVFSG
DPVDDSDLPGMISDSEEGEDGNGDQGVVPGDDDGEAPLMWDRRPKPDDYL
VFHPVLGVVPAGVVRAWGGDGRGGWSGVRAEAAGARVGGTNGGTGGKGCG
CSSKSSSPRGALAPAAVSSKAIAAGGVVKGKQLPPDEWPEWLAARRGTAA
AAVAEVEAGKEVARAATIRPAAGAVPTEEDAIAAAPAVVEGREANDGREV
QRRGDNERTATATEARPSAASRGNAGVGVGQTIGPHQQQQPLGDASRTRP
AAIGLQFGDGCVNGGGGDSSTEGPRPLGSEDGDALSFVGGGGGGSAGSCC
PSEDNSIDVRAGDFSSRRVSLSAEQPPAMTAGYRVS*

mRNA from alignment at Ecto-sp9_F_contig945:16807..21204+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp9_F_contig945.17600.1 ID=mRNA_Ecto-sp9_F_contig945.17600.1|Name=mRNA_Ecto-sp9_F_contig945.17600.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=4398bp|location=Sequence derived from alignment at Ecto-sp9_F_contig945:16807..21204+ (Ectocarpus species9 EcSCA_722f female)
CAGCGTTTTTATCACGCACCACCGGGGGCGGAGGTGCATACGACGACACC
CATGGTCCGACGACGACAAAGACGGCGGGATCACGCTTCCCCTGCAGCTT
CCTTGGCTTCCTTGGCAGCATATGCCATCCTGCTGTATTTTTCGATCTCC
CCCACCGTTGCCGCCGCCGCCTCCGTGGCGCATGCCCCCCGACGGCAAAA
GCTTCAGCCTCTAGACGAAACCCCGTCGGGCGGCGGCGGCGGCGGCATCG
GAGGCAAAGGATGGAACACGGCCCGCAATAGCTGGATCGATGCCGACGAG
GGAGAGCTGGAGGCCGAAGAACAGAACGCCAGATTTAGCAACAGAGACGG
TGAAGGGGCCTGCAGCTCCAACCGTGGAGGCGATGGCAAGGGTGTTGGGA
GCAACGGCAAACTATGGGACGGGCAGGCTTGGGGCGTACCCGCTCCCGCG
CTGGAGCCGTCGTGCCACTTATTGGATAGGCCACCGGACGCTTATCCCGG
GGCAATCAAGACGGTAGGCGGTACGATGCCGGAAAGCCGTCACGATTCGT
CATGGTGTGCCGGCGACGAAGACTGTGTGCTTCCTCCGGCAACAGGGGCT
GGCAACAAGGAGGAGGCGGTAAGAGGAGGAGGCGTGGGTGGCAGTCAGGA
AGGCACCGGTAGTTGCATCGCTGCCGCTGGTGCCGCCGCCGGCGGCGGCA
ACAGTGGAGAAGCGGCGGCACGCCGAGGAGAATCATCTATCCCAGGGGAT
GCGGGCCGGGTGCCGGATGACGAGGCGCGGGCGTTGTCCAGCGGAGAAGG
CCCTCCCAGGCGCGACGGACGATTCACCACGACAGCTGCGGCTTCTCTTG
CTGATTTCACCGCCGCCGAACCAAAAGAACAGCAGTCCAGGCTCGTCGAC
GGCTACGCAACAATCGCCACGGCTGCCTATCCGCAGTCCAAACCACCATC
CACCACGGAGCAGAGTAGCTTGCCCACCGCAGCCCGGCCTACCGTAGCAG
CAGAACGACCTCCCCAGCAGGAGCAAAGAGGGCCGTTGGTGAAGGGACAG
GGTGCGAACACCAACACCCGGGACGGGGATACGGGCGGTGTTAAACACCC
GGGCGCTACTGCTGTGGTCCACGGGGATAGAAGGACCGGTGCAACCGATG
AGGGTGCCAGGGCGGAGGAGCCAACACCAGGCCGGTGGAATCGCCACGCT
AACGTCGGTCCTACTGGTGGTAGCAAGGGAAAAGGGCGGCGTGAGAGAGA
GTTGCCTGCAGGAACCGGCGGGGGAGGGAGCGGAAGTGAGAAGCGGGGAG
GGGAGGGGAGGGTGTTAGAAACCATCATCGTTGGCGGCAAGGCGTGGCCT
TCGTGGAGAACGTTCGCGTGCATCTTGCTGCTGAGCGCGCTTGTTTTGGG
CACATTCCTGCGAGGTGAGTCACCCGCCTCTTGTGTTTTAATTGGTCTGT
GATGTTCGAAGGTGACCTGGGTGTCACGGCAGGAGCGTCGGCATGCCGCC
CTCACCTTAGCTCGTTTTGTCTACTCTAAGCCCTAGCCGAAACTATCCAT
CCGTGTGTGAACTAGATAGACGGACACACCACAGCGGCAGCAGTGTGTTC
GTGACTATACGGACGAACTAACATGACCGTCGTGGTTTTCAAGCCTCGAG
TCTCTGCTCAGGCGGCCGCAACCCACGCTTGGCTCTACGTAGAACGTTGT
TGTGTTTTGATACGTGACAGCTTGGAGCCCTCAAAGGTTGTCCACACACA
CCCTCGCTACACGCCGACGGCCCACGATGCTACGTTTCCAAATGCAGTGC
CACCAGAGGGTGTATTGCTTGATAGCAACCCCACATGCCCGTTCATTGTA
CCCCGCGACCCCTCAGGAAGCATGCCGCATTGGCTACCGTTCTTCGGCGG
AGACCGCCGTCAGCGCTGGGCGATAGACCTCGACTCGGCCATCGCGCACG
CCCGCTCCCGCGCCGGCAGCTTCTGCTCGGGCAGGGCCAGCGTGTTCTCG
GGGGACCCCGTGGACGATTCTGACCTACCGGGAATGATTTCGGATAGCGA
AGAAGGCGAAGACGGCAACGGCGACCAGGGCGTGGTGCCAGGAGATGATG
ATGGAGAGGCCCCCCTGATGTGGGACAGGAGGCCGAAGCCTGACGACTAC
CTGGTTTTCCACCCCGTGCTAGGAGTCGTGCCGGCGGGCGTCGTGCGTGC
CTGGGGCGGTGACGGCCGCGGGGGTTGGAGCGGTGTGCGTGCGGAGGCGG
CCGGGGCGAGGGTGGGAGGGACCAACGGGGGGACTGGCGGTAAAGGTTGT
GGGTGTTCCTCCAAGTCTTCGTCGCCAAGGGGTGCTCTCGCGCCCGCAGC
GGTGTCGTCGAAGGCGATCGCGGCGGGCGGTGTCGTCAAGGGGAAACAGC
TGCCTCCGGACGAATGGCCCGAGTGGCTGGCGGCCCGTAGAGGGACGGCA
GCAGCAGCGGTAGCGGAAGTAGAAGCAGGAAAGGAAGTAGCAAGGGCCGC
GACAATACGACCAGCAGCAGGAGCAGTACCAACAGAAGAAGACGCGATTG
CCGCAGCACCAGCAGTAGTGGAAGGCAGGGAGGCCAATGATGGGCGGGAA
GTTCAACGGCGCGGCGATAATGAGAGGACGGCAACGGCGACGGAGGCGCG
GCCGTCTGCGGCGAGTAGGGGGAATGCGGGGGTGGGTGTAGGACAGACGA
TTGGCCCTCATCAGCAGCAGCAGCCCCTAGGTGACGCGAGCCGCACCCGG
CCGGCCGCGATCGGGCTTCAGTTCGGAGACGGCTGCGTCAACGGTGGCGG
TGGCGACAGCAGCACGGAAGGGCCTAGACCGCTTGGTAGTGAGGACGGTG
ATGCCTTGAGCTTTGTTGGCGGCGGCGGCGGCGGAAGCGCTGGGAGCTGT
TGCCCCTCGGAAGACAACAGCATAGACGTGCGAGCGGGCGACTTCTCCTC
GCGGCGGGTGTCCTTATCTGCCGAGCAGCCGCCCGCGATGACGGCGGGAT
ACCGCGTGTCCTAGGATAGAGTGAGGCGTCTGTCAGCTTGTTTTTCTATC
TCTCTCTCTCTCGCCTCCTTGATGTTTCGTCGATGGCGCGTGGAAAGCCT
TGTAATGTCGACCGCCGTCTGCTTGTGCTACAAACGTCCCGTCAGGGAGG
CGGTGTGCCCAGCGACTGGGAGGTAGAGAGGGAACGGCTCTGCTGTACCA
CTAGAGTATAATAACACACCAAGTCAGGACTTTCTTTTCGCGGTCGGGCC
CGATGTAGCTGCCACAGCGTGGGGGCATCTTGACGCACTCTTTCTACTCT
TGACGGCTGCGGTGGGCGTGCGAGGTGGCCGGTGCTCCCTTCCGGATTCA
AGCCGTAGGTTGCCATGACGTAAAATGTCACACCCCCTGGAACGATGTTC
AAAACTCGACTACTCGGCAGCGAAAACAGTGACGGTGCCCCAAAATGACG
GCGTTGGAACCGTCTCGTCGAGATCTCATCTGCGGTTTGGCATTCTCTTC
GTGGAGGAATCGAGCTTCGAAAATCTGCCTAGGGGGTGTGGTGTCTTGTG
ACGCCATTGGTACGTTACGGAGGTGAGGCGGAAGGGCGCAACGGCGGCGA
CTTGGCGATTTGGTATGCGGCGAGGAGAGCGCAGCTGCGGTTTGAAGCAA
TCCGTGGCGTTCAGGCTGACCATACGCTATTTCTGATGGGCGTGTCTGGT
TTCCCCCAACGGCTTTGTGTTGTCGGGCTCTTGGTTTGTCTCTGACATGG
AGCTCGACTTGGTTCAGTGGCGTTCTGTGGAGTTTCTTTGGCTCGGGTTG
GCCATGACTCTCGCGTCCAGGAGTTGCGGTTGGGTGCTTGGCCGAGCAAC
ACACAGCAACTTCGGCTTTCGACAGCGCGTAGCTTTGGCCTAGCGTCTCG
TTCTTGTGGCAGAATTCAAGCACTACGGCCGTGGGCCGACAAGGGCTTGA
TATCGTGACGTGGTGATGTATTAACAAAATGTGCCGTGTTGTTGGTTTTG
GAGGAGGAGGAGGAGGAGGAGGATGTAGAGTGGTGATGATGGTGTTGGTT
GTTGTTGATGTTGATGGTGTTGGTTTTGTCGTGTTGGGGCGGTGGGAGAG
CGCGTACGGGAGGAAAGCTCAGGAGGGATGAAAATGAATGCGCCGATTTG
GTTAATAGGAAACATGGCTGGCTCGACCGATGATTGGATGCGAGCATGGT
GTCATCTACACCCCGAATTGCGTGAGAAGGGGAGAGGATTCAAGAGTCAG
ACCCCCGCCGATTTTGGAGTTATACCATGACCCACGCGTCCCATAGAATG
GAAGCTGGTTTTGAAGGGTAACCGAATGGCCTACGTTCGATAGGCCTAGA
CATACTACACACTCGGTTCTTGGCAATGGAAGCCCCAGAAGGTAACGC

Coding sequence (CDS) from alignment at Ecto-sp9_F_contig945:16807..21204+

>mRNA_Ecto-sp9_F_contig945.17600.1 ID=mRNA_Ecto-sp9_F_contig945.17600.1|Name=mRNA_Ecto-sp9_F_contig945.17600.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=5022bp|location=Sequence derived from alignment at Ecto-sp9_F_contig945:16807..21204+ (Ectocarpus species9 EcSCA_722f female)
ATGGTCCGACGACGACAAAGACGGCGGGATCACGCTTCCCCTGCAGCTTC
CTTGGCTTCCTTGGCAGCATATGCCATCCTGCTGTATTTTTCGATCTCCC
CCACCGTTGCCGCCGCCGCCTCCGTGGCGCATGCCCCCCGACGGCAAAAG
CTTCAGCCTCTAGACGAAACCCCGTCGGGCGGCGGCGGCGGCGGCATCGG
AGGCAAAGGATGGAACACGGCCCGCAATAGCTGGATCGATGCCGACGAGG
GAGAGCTGGAGGCCGAAGAACAGAACGCCAGATTTAGCAACAGAGACGGT
GAAGGGGCCTGCAGCTCCAACCGTGGAGGCGATGGCAAGGGTGTTGGGAG
CAACGGCAAACTATGGGACGGGCAGGCTTGGGGCGTACCCGCTCCCGCGC
TGGAGCCGTCGTGCCACTTATTGGATAGGCCACCGGACGCTTATCCCGGG
GCAATCAAGACGGTAGGCGGTACGATGCCGGAAAGCCGTCACGATTCGTC
ATGGTGTGCCGGCGACGAAGACTGTGTGCTTCCTCCGGCAACAGGGGCTG
GCAACAAGGAGGAGGCGGTAAGAGGAGGAGGCGTGGGTGGCAGTCAGGAA
GGCACCGGTAGTTGCATCGCTGCCGCTGGTGCCGCCGCCGGCGGCGGCAA
CAGTGGAGAAGCGGCGGCACGCCGAGGAGAATCATCTATCCCAGGGGATG
CGGGCCGGGTGCCGGATGACGAGGCGCGGGCGTTGTCCAGCGGAGAAGGC
CCTCCCAGGCGCGACGGACGATTCACCACGACAGCTGCGGCTTCTCTTGC
TGATTTCACCGCCGCCGAACCAAAAGAACAGCAGTCCAGGCTCGTCGACG
GCTACGCAACAATCGCCACGGCTGCCTATCCGCAGTCCAAACCACCATCC
ACCACGGAGCAGAGTAGCTTGCCCACCGCAGCCCGGCCTACCGTAGCAGC
AGAACGACCTCCCCAGCAGGAGCAAAGAGGGCCGTTGGTGAAGGGACAGG
GTGCGAACACCAACACCCGGGACGGGGATACGGGCGGTGTTAAACACCCG
GGCGCTACTGCTGTGGTCCACGGGGATAGAAGGACCGGTGCAACCGATGA
GGGTGCCAGGGCGGAGGAGCCAACACCAGGCCGGTGGAATCGCCACGCTA
ACGTCGGTCCTACTGGTGGTAGCAAGGGAAAAGGGCGGCGTGAGAGAGAG
TTGCCTGCAGGAACCGGCGGGGGAGGGAGCGGAAGTGAGAAGCGGGGAGG
GGAGGGGAGGGTGTTAGAAACCATCATCGTTGGCGGCAAGGCGTGGCCTT
CGTGGAGAACGTTCGCGTGCATCTTGCTGCTGAGCGCGCTTGTTTTGGGC
ACATTCCTGCGAGGTGAATGGTCCGACGACGACAAAGACGGCGGGATCAC
GCTTCCCCTGCAGCTTCCTTGGCTTCCTTGGCAGCATATGCCATCCTGCT
GTATTTTTCGATCTCCCCCACCGTTGCCGCCGCCGCCTCCGTGGCGCATG
CCCCCCGACGGCAAAAGCTTCAGCCTCTAGACGAAACCCCGTCGGGCGGC
GGCGGCGGCGGCATCGGAGGCAAAGGATGGAACACGGCCCGCAATAGCTG
GATCGATGCCGACGAGGGAGAGCTGGAGGCCGAAGAACAGAACGCCAGAT
TTAGCAACAGAGACGGTGAAGGGGCCTGCAGCTCCAACCGTGGAGGCGAT
GGCAAGGGTGTTGGGAGCAACGGCAAACTATGGGACGGGCAGGCTTGGGG
CGTACCCGCTCCCGCGCTGGAGCCGTCGTGCCACTTATTGGATAGGCCAC
CGGACGCTTATCCCGGGGCAATCAAGACGGTAGGCGGTACGATGCCGGAA
AGCCGTCACGATTCGTCATGGTGTGCCGGCGACGAAGACTGTGTGCTTCC
TCCGGCAACAGGGGCTGGCAACAAGGAGGAGGCGGTAAGAGGAGGAGGCG
TGGGTGGCAGTCAGGAAGGCACCGGTAGTTGCATCGCTGCCGCTGGTGCC
GCCGCCGGCGGCGGCAACAGTGGAGAAGCGGCGGCACGCCGAGGAGAATC
ATCTATCCCAGGGGATGCGGGCCGGGTGCCGGATGACGAGGCGCGGGCGT
TGTCCAGCGGAGAAGGCCCTCCCAGGCGCGACGGACGATTCACCACGACA
GCTGCGGCTTCTCTTGCTGATTTCACCGCCGCCGAACCAAAAGAACAGCA
GTCCAGGCTCGTCGACGGCTACGCAACAATCGCCACGGCTGCCTATCCGC
AGTCCAAACCACCATCCACCACGGAGCAGAGTAGCTTGCCCACCGCAGCC
CGGCCTACCGTAGCAGCAGAACGACCTCCCCAGCAGGAGCAAAGAGGGCC
GTTGGTGAAGGGACAGGGTGCGAACACCAACACCCGGGACGGGGATACGG
GCGGTGTTAAACACCCGGGCGCTACTGCTGTGGTCCACGGGGATAGAAGG
ACCGGTGCAACCGATGAGGGTGCCAGGGCGGAGGAGCCAACACCAGGCCG
GTGGAATCGCCACGCTAACGTCGGTCCTACTGGTGGTAGCAAGGGAAAAG
GGCGGCGTGAGAGAGAGTTGCCTGCAGGAACCGGCGGGGGAGGGAGCGGA
AGTGAGAAGCGGGGAGGGGAGGGGAGGGTGTTAGAAACCATCATCGTTGG
CGGCAAGGCGTGGCCTTCGTGGAGAACGTTCGCGTGCATCTTGCTGCTGA
GCGCGCTTGTTTTGGGCACATTCCTGCGAGGTGACATGCCGCATTGGCTA
CCGTTCTTCGGCGGAGACCGCCGTCAGCGCTGGGCGATAGACCTCGACTC
GGCCATCGCGCACGCCCGCTCCCGCGCCGGCAGCTTCTGCTCGGGCAGGG
CCAGCGTGTTCTCGGGGGACCCCGTGGACGATTCTGACCTACCGGGAATG
ATTTCGGATAGCGAAGAAGGCGAAGACGGCAACGGCGACCAGGGCGTGGT
GCCAGGAGATGATGATGGAGAGGCCCCCCTGATGTGGGACAGGAGGCCGA
AGCCTGACGACTACCTGGTTTTCCACCCCGTGCTAGGAGTCGTGCCGGCG
GGCGTCGTGCGTGCCTGGGGCGGTGACGGCCGCGGGGGTTGGAGCGGTGT
GCGTGCGGAGGCGGCCGGGGCGAGGGTGGGAGGGACCAACGGGGGGACTG
GCGGTAAAGGTTGTGGGTGTTCCTCCAAGTCTTCGTCGCCAAGGGGTGCT
CTCGCGCCCGCAGCGGTGTCGTCGAAGGCGATCGCGGCGGGCGGTGTCGT
CAAGGGGAAACAGCTGCCTCCGGACGAATGGCCCGAGTGGCTGGCGGCCC
GTAGAGGGACGGCAGCAGCAGCGGTAGCGGAAGTAGAAGCAGGAAAGGAA
GTAGCAAGGGCCGCGACAATACGACCAGCAGCAGGAGCAGTACCAACAGA
AGAAGACGCGATTGCCGCAGCACCAGCAGTAGTGGAAGGCAGGGAGGCCA
ATGATGGGCGGGAAGTTCAACGGCGCGGCGATAATGAGAGGACGGCAACG
GCGACGGAGGCGCGGCCGTCTGCGGCGAGTAGGGGGAATGCGGGGGTGGG
TGTAGGACAGACGATTGGCCCTCATCAGCAGCAGCAGCCCCTAGGTGACG
CGAGCCGCACCCGGCCGGCCGCGATCGGGCTTCAGTTCGGAGACGGCTGC
GTCAACGGTGGCGGTGGCGACAGCAGCACGGAAGGGCCTAGACCGCTTGG
TAGTGAGGACGGTGATGCCTTGAGCTTTGTTGGCGGCGGCGGCGGCGGAA
GCGCTGGGAGCTGTTGCCCCTCGGAAGACAACAGCATAGACGTGCGAGCG
GGCGACTTCTCCTCGCGGCGGGTGTCCTTATCTGCCGAGCAGCCGCCCGC
GATGACGGCGGGATACCGCGTGTCCTAGCATGCCGCATTGGCTACCGTTC
TTCGGCGGAGACCGCCGTCAGCGCTGGGCGATAGACCTCGACTCGGCCAT
CGCGCACGCCCGCTCCCGCGCCGGCAGCTTCTGCTCGGGCAGGGCCAGCG
TGTTCTCGGGGGACCCCGTGGACGATTCTGACCTACCGGGAATGATTTCG
GATAGCGAAGAAGGCGAAGACGGCAACGGCGACCAGGGCGTGGTGCCAGG
AGATGATGATGGAGAGGCCCCCCTGATGTGGGACAGGAGGCCGAAGCCTG
ACGACTACCTGGTTTTCCACCCCGTGCTAGGAGTCGTGCCGGCGGGCGTC
GTGCGTGCCTGGGGCGGTGACGGCCGCGGGGGTTGGAGCGGTGTGCGTGC
GGAGGCGGCCGGGGCGAGGGTGGGAGGGACCAACGGGGGGACTGGCGGTA
AAGGTTGTGGGTGTTCCTCCAAGTCTTCGTCGCCAAGGGGTGCTCTCGCG
CCCGCAGCGGTGTCGTCGAAGGCGATCGCGGCGGGCGGTGTCGTCAAGGG
GAAACAGCTGCCTCCGGACGAATGGCCCGAGTGGCTGGCGGCCCGTAGAG
GGACGGCAGCAGCAGCGGTAGCGGAAGTAGAAGCAGGAAAGGAAGTAGCA
AGGGCCGCGACAATACGACCAGCAGCAGGAGCAGTACCAACAGAAGAAGA
CGCGATTGCCGCAGCACCAGCAGTAGTGGAAGGCAGGGAGGCCAATGATG
GGCGGGAAGTTCAACGGCGCGGCGATAATGAGAGGACGGCAACGGCGACG
GAGGCGCGGCCGTCTGCGGCGAGTAGGGGGAATGCGGGGGTGGGTGTAGG
ACAGACGATTGGCCCTCATCAGCAGCAGCAGCCCCTAGGTGACGCGAGCC
GCACCCGGCCGGCCGCGATCGGGCTTCAGTTCGGAGACGGCTGCGTCAAC
GGTGGCGGTGGCGACAGCAGCACGGAAGGGCCTAGACCGCTTGGTAGTGA
GGACGGTGATGCCTTGAGCTTTGTTGGCGGCGGCGGCGGCGGAAGCGCTG
GGAGCTGTTGCCCCTCGGAAGACAACAGCATAGACGTGCGAGCGGGCGAC
TTCTCCTCGCGGCGGGTGTCCTTATCTGCCGAGCAGCCGCCCGCGATGAC
GGCGGGATACCGCGTGTCCTAG