mRNA_Ecto-sp9_F_contig9410.17564.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig9410.17564.1
Unique NamemRNA_Ecto-sp9_F_contig9410.17564.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig9410.17564.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBR9_9PHAE)

HSP 1 Score: 401 bits (1031), Expect = 2.020e-130
Identity = 205/209 (98.09%), Postives = 206/209 (98.56%), Query Frame = 1
Query:   28 EPPAIPLLPSKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRLAPTLQRGSDGVLPVCLRARYKEMIACQARDCFMVKTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVGPGRQARDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIHD 654
            EPPAIPLL SKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRLAPTLQ+G  GVLPVCLRARYKEMIACQARDCFMVKTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVGPGRQARDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIHD
Sbjct:   62 EPPAIPLLRSKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRLAPTLQQGGGGVLPVCLRARYKEMIACQARDCFMVKTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVGPGRQARDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIHD 270          
BLAST of mRNA_Ecto-sp9_F_contig9410.17564.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFI6_ECTSI)

HSP 1 Score: 353 bits (905), Expect = 8.410e-109
Identity = 188/209 (89.95%), Postives = 188/209 (89.95%), Query Frame = 1
Query:   28 EPPAIPLLPSKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRLAPTLQRGSDGVLPVCLRARYKEMIACQARDCFMVKTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVGPGRQARDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIHD 654
            EPPAIPLL SKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRLAPTLQRGSDGVLPV                    KTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVGPGRQARDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIHD
Sbjct:  194 EPPAIPLLRSKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRLAPTLQRGSDGVLPV--------------------KTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVGPGRQARDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIHD 382          
BLAST of mRNA_Ecto-sp9_F_contig9410.17564.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WWQ5_9STRA)

HSP 1 Score: 241 bits (616), Expect = 5.910e-70
Identity = 130/207 (62.80%), Postives = 156/207 (75.36%), Query Frame = 1
Query:   37 AIPLLPSKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRL-APTLQRGSDGVLPVCLRARYKEMIACQARDCFMVKTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVGPGRQARDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIHD 654
            AI  L   DSFKVLTECPLIVMLLFQLYPKYI+ NIP L PLM+  L L AP L            R RYKE IACQ      VKTLSFLTYLLRGF+ LM+PYE+ IS +VI L+ +CP DA++TRKELLVATRHILATEFR+GFY  +D +LDE++L+G G  +RDTLRPLA+STLADLVHHV+  + + Q+S V+ +FS+N+HD
Sbjct:  228 AISALQGLDSFKVLTECPLIVMLLFQLYPKYIQENIPLLTPLMMGGLALHAPILAHKLQ-------RNRYKEFIACQ------VKTLSFLTYLLRGFSELMKPYEEAISKAVITLMIACPGDAISTRKELLVATRHILATEFRRGFYQHIDTLLDENVLIGVGHPSRDTLRPLAFSTLADLVHHVRAELSISQLSCVVLLFSRNLHD 421          
BLAST of mRNA_Ecto-sp9_F_contig9410.17564.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHH3_AURAN)

HSP 1 Score: 241 bits (616), Expect = 5.960e-70
Identity = 129/203 (63.55%), Postives = 154/203 (75.86%), Query Frame = 1
Query:   46 LLPSKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRLAPTLQRGSDGVLPVCLRARYKEMIACQARDCFMVKTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVGPGRQARDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIHD 654
            +L   DSFKVLTECPLIVMLLFQLYPKYI+ NIP L PLM+  L L   L            R RY+E +ACQ      VKTLSFLTYLLRGF+ LM+PYE+ IS +VI L+ +CP DAVATRKELLVATRHILATEFR+GFY  VD +LDE +L+G GR +RD LRPLA+STLADLVHHV+  ++L Q+SRV+ +FS+N+HD
Sbjct:  922 VLQGLDSFKVLTECPLIVMLLFQLYPKYIQDNIPLLTPLMMGGLALRAPLAAYK------LQRERYREFVACQ------VKTLSFLTYLLRGFSELMKPYEEAISKAVIALMIACPGDAVATRKELLVATRHILATEFRRGFYRHVDTLLDEKVLIGLGRPSRDALRPLAFSTLADLVHHVRAELNLSQLSRVVLLFSRNLHD 1112          
BLAST of mRNA_Ecto-sp9_F_contig9410.17564.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DVY0_9EUKA)

HSP 1 Score: 212 bits (540), Expect = 1.010e-62
Identity = 114/203 (56.16%), Postives = 146/203 (71.92%), Query Frame = 1
Query:   46 LLPSKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRLAPTLQRGSDGVLPVCLRARYKEMIACQARDCFMVKTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVGPGRQARDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIHD 654
            L  S +SFKVLTECPLIVMLLFQLYP+Y++ NI  LIPLM+ AL + P                 Y + IA Q      VKTLSFLTY+LRGF   MQP++  +S  VI LL +CP+ ++ +RKELLVATRHILAT FRKGF+++++ ML ED+L+G GR A + +RPLAYSTLADLVHHV+  + +DQ+S+VI +FS+NIHD
Sbjct:   52 LCKSVESFKVLTECPLIVMLLFQLYPRYVEQNIHHLIPLMMRALNIQPPTNLTQQH------SQLYSDFIAAQ------VKTLSFLTYVLRGFADRMQPHQDNLSKCVIQLLLNCPTSSINSRKELLVATRHILATNFRKGFFNKLNMMLKEDVLIGQGR-AHEIVRPLAYSTLADLVHHVRADLSIDQLSKVIYIFSRNIHD 241          
BLAST of mRNA_Ecto-sp9_F_contig9410.17564.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0MWT5_9CHLO)

HSP 1 Score: 196 bits (498), Expect = 2.710e-60
Identity = 104/200 (52.00%), Postives = 143/200 (71.50%), Query Frame = 1
Query:   55 SKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRLA-PTLQRGSDGVLPVCLRARYKEMIACQARDCFMVKTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVGPGRQARDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIH 651
            S+ SFKV+ ECPLIVM LFQLYP+ I+ N P L+PLM++ + ++ P L     G +P  L+A + ++ A Q      VKT+SFLTY+LR F    + ++  I+ SV++LLR+CP D V+TRKELLVATRH++AT+FRKGF+  V  +LDE +LVG GR     LRPLAYS LA+L+HHV+  + L Q+SRVI +FS+N+H
Sbjct:    2 SRCSFKVVIECPLIVMFLFQLYPRNIQHNTPRLLPLMVETISISGPPL-----GHIPAHLKATHADLKAAQ------VKTMSFLTYMLRSFADHFRSHQDSIAGSVVDLLRTCP-DIVSTRKELLVATRHVIATDFRKGFHGYVATLLDEQVLVGSGRACHQALRPLAYSLLAELIHHVRTELSLQQLSRVIYLFSRNVH 189          
BLAST of mRNA_Ecto-sp9_F_contig9410.17564.1 vs.
Match: Phosphatidylinositol (3-and 4-kinase family protein with FAT domain n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I709_KLENI)

HSP 1 Score: 211 bits (538), Expect = 1.780e-59
Identity = 111/208 (53.37%), Postives = 152/208 (73.08%), Query Frame = 1
Query:   31 PPAIPLLPSKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRLAPTLQRGSDGVLPVCLRARYKEMIACQARDCFMVKTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVGPGRQARDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIHD 654
            PP   L PS  SFKV+TECPLIVM LFQLYP+++  NIP L+PLM+  + +      G + V P  L+  + ++ A Q      VKT+SF+TYLLR F+  ++PY + +S S++NLL +CP D++ATRKELLVATRH+LAT+FRKGF++ +D +LDE +LVG GR   +TLRPLAYS LA+L+HHV+  + L Q+SR+I +FSKN+HD
Sbjct:  249 PPLGQLNPSVRSFKVVTECPLIVMFLFQLYPRFLGVNIPTLLPLMVTTISIP-----GPNNV-PPHLKQTFSDLKAAQ------VKTVSFMTYLLRSFSDDIRPYTENVSKSIVNLLVTCP-DSIATRKELLVATRHVLATDFRKGFFTHIDILLDERVLVGTGRSCYETLRPLAYSLLAELIHHVRIDLSLQQLSRIIYLFSKNVHD 443          
BLAST of mRNA_Ecto-sp9_F_contig9410.17564.1 vs.
Match: Uncharacterized (protein n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XKQ8_MARPO)

HSP 1 Score: 209 bits (532), Expect = 1.140e-58
Identity = 108/203 (53.20%), Postives = 150/203 (73.89%), Query Frame = 1
Query:   46 LLPSKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRLAPTLQRGSDGVLPVCLRARYKEMIACQARDCFMVKTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVGPGRQARDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIHD 654
            L PS  SFKV+TECPLIVM LFQLYP+Y++ NIP L+PLM++A+ +    Q      +P  L+  + E+   Q      VKT+SFLTYLL+ F   ++ +E+ IS S++NLL SCP D+V+ RKELLVATRH+LAT+FR+GF+S++D +LDE +LVG GR   +TLRPLAYS LA+L+HHV+  + L Q+SR++ +FS+N+HD
Sbjct:  192 LNPSTRSFKVVTECPLIVMFLFQLYPRYLQTNIPLLLPLMVNAISITGPSQ------VPTNLKNAFAELKGAQ------VKTVSFLTYLLKSFADCIRSHEESISKSIVNLLVSCP-DSVSIRKELLVATRHVLATDFRRGFFSQIDTLLDERVLVGTGRACYETLRPLAYSLLAELIHHVRLDLSLPQLSRIVYLFSRNVHD 381          
BLAST of mRNA_Ecto-sp9_F_contig9410.17564.1 vs.
Match: FAT (domain-containing protein n=4 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CBB9_DIALT)

HSP 1 Score: 208 bits (529), Expect = 2.890e-58
Identity = 115/211 (54.50%), Postives = 147/211 (69.67%), Query Frame = 1
Query:   37 AIPLLPSKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRLAPTLQRGSDGVLPVCLRARYKEMIACQARDCFMVKTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVG----PG-RQARDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIHD 654
            A+ L  S +SFKVLTECPLIVMLLFQLYP YI+A IP+LIPLM+ AL L         G  P   R +Y + +A Q      VKTLSFLTYLLR F   M  Y++ I   VI LL + P+D+ + RK++L+ATRHILAT+FR GF+S VD +L+E+LL+G    PG R + + LRPLA STLADLVHHV+  + + Q+SRV+ +F+KNIHD
Sbjct:  447 AVRLTKSTESFKVLTECPLIVMLLFQLYPSYIQATIPELIPLMVSALALRA-------GPPPPAQRVQYADCMAAQ------VKTLSFLTYLLRAFADFMSSYQESIPKCVIQLLHAAPADSASIRKDVLIATRHILATDFRTGFFSHVDALLNEELLLGGRVSPGSRSSHEALRPLACSTLADLVHHVRGALSMGQLSRVVHLFAKNIHD 644          
BLAST of mRNA_Ecto-sp9_F_contig9410.17564.1 vs.
Match: Uncharacterized (protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HAR4_SPIPD)

HSP 1 Score: 206 bits (525), Expect = 9.870e-58
Identity = 109/224 (48.66%), Postives = 151/224 (67.41%), Query Frame = 1
Query:    1 GTAAAAAAAEPPAIPLLPSKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRLAPTLQR------GSDGVLPVCLRARYKEMIACQARDCFMVKTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVGPGRQARDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIHD 654
            G+ A + + EP    L  S  SFKVLTECP+I+ LLFQLY KY+ AN+P  +PL+I  L L P  QR       + GV+ V + A  +   A        VKT+SF+ Y+LR F P+++PY++QI+ +V+ L+RSCP DA ATRKELLVATRHI  T+FR  F   VD +L+ED+LVG G  A++TLRP+A+S L DL+HHV+  + + Q+SR I ++S+N+HD
Sbjct:  186 GSPAQSDSGEPSTRVLQKSLYSFKVLTECPIIIALLFQLYRKYVNANVPVFVPLIIHCLTLLPAQQRQELADADAAGVVYVGISANVRNRAALTDFIMLQVKTVSFIAYILRSFVPILKPYQQQIADAVVVLMRSCPPDAAATRKELLVATRHIWYTDFRHAFVKHVDILLNEDVLVGSGVTAKETLRPIAHSVLVDLIHHVRADLSIAQLSRAIHMYSRNLHD 409          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9410.17564.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized2.020e-13098.09protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized8.410e-10989.95protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Hypothetical5.910e-7062.80protein n=1 Tax=Pelagomonas calceolata TaxID=35677... [more]
Uncharacterized5.960e-7063.55protein n=1 Tax=Aureococcus anophagefferens TaxID=... [more]
Hypothetical1.010e-6256.16protein (Fragment) n=1 Tax=Lotharella globosa TaxI... [more]
Hypothetical2.710e-6052.00protein (Fragment) n=1 Tax=Pyramimonas obovata Tax... [more]
Phosphatidylinositol1.780e-5953.373-and 4-kinase family protein with FAT domain n=1 ... [more]
Uncharacterized1.140e-5853.20protein n=3 Tax=Marchantia polymorpha TaxID=3197 R... [more]
FAT2.890e-5854.50domain-containing protein n=4 Tax=Diacronema luthe... [more]
Uncharacterized9.870e-5848.66protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9410contigEcto-sp9_F_contig9410:2108..4692 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score353.2
Seed ortholog evalue8.6e-95
Seed eggNOG ortholog2880.D8LFI6
KEGG koko:K08874
KEGG Pathwayko05166,map05166
GOsGO:0000123,GO:0000166,GO:0003674,GO:0003712,GO:0003824,GO:0004402,GO:0004672,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006259,GO:0006281,GO:0006325,GO:0006464,GO:0006468,GO:0006473,GO:0006475,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008080,GO:0008144,GO:0008150,GO:0008152,GO:0009889,GO:0009987,GO:0010556,GO:0016043,GO:0016301,GO:0016310,GO:0016407,GO:0016410,GO:0016569,GO:0016570,GO:0016573,GO:0016740,GO:0016746,GO:0016747,GO:0016772,GO:0016773,GO:0017076,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019538,GO:0030554,GO:0031248,GO:0031323,GO:0031326,GO:0031974,GO:0031981,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034212,GO:0034641,GO:0035267,GO:0035639,GO:0036094,GO:0036211,GO:0043167,GO:0043168,GO:0043170,GO:0043189,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051276,GO:0051716,GO:0060255,GO:0061733,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:0140096,GO:0140110,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1902493,GO:1902494,GO:1902562,GO:1903506,GO:1990234,GO:2001141
EggNOG free text desc.phosphatidylinositol kinase activity
EggNOG OGsCOG5032@1,KOG0889@2759
COG Functional cat.BDLTU
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01001,ko03021,ko03036
Hectar predicted targeting categoryother localisation
Exons4
Model size654
Cds size654
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9410.17564.1prot_Ecto-sp9_F_contig9410.17564.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig9410 2108..4692 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931022.6928875-CDS-Ecto-sp9_F_contig9410:2107..21311622931022.6928875-CDS-Ecto-sp9_F_contig9410:2107..2131Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9410 2108..2131 -
1692278997.224769-CDS-Ecto-sp9_F_contig9410:2107..21311692278997.224769-CDS-Ecto-sp9_F_contig9410:2107..2131Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9410 2108..2131 -
1622931022.7131107-CDS-Ecto-sp9_F_contig9410:3080..32301622931022.7131107-CDS-Ecto-sp9_F_contig9410:3080..3230Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9410 3081..3230 -
1692278997.2443123-CDS-Ecto-sp9_F_contig9410:3080..32301692278997.2443123-CDS-Ecto-sp9_F_contig9410:3080..3230Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9410 3081..3230 -
1622931022.727996-CDS-Ecto-sp9_F_contig9410:3830..40281622931022.727996-CDS-Ecto-sp9_F_contig9410:3830..4028Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9410 3831..4028 -
1692278997.2568738-CDS-Ecto-sp9_F_contig9410:3830..40281692278997.2568738-CDS-Ecto-sp9_F_contig9410:3830..4028Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9410 3831..4028 -
1622931022.7465234-CDS-Ecto-sp9_F_contig9410:4410..46921622931022.7465234-CDS-Ecto-sp9_F_contig9410:4410..4692Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9410 4411..4692 -
1692278997.271577-CDS-Ecto-sp9_F_contig9410:4410..46921692278997.271577-CDS-Ecto-sp9_F_contig9410:4410..4692Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9410 4411..4692 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig9410.17564.1

>prot_Ecto-sp9_F_contig9410.17564.1 ID=prot_Ecto-sp9_F_contig9410.17564.1|Name=mRNA_Ecto-sp9_F_contig9410.17564.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=218bp
GTAAAAAAAEPPAIPLLPSKDSFKVLTECPLIVMLLFQLYPKYIKANIPD
LIPLMIDALRLAPTLQRGSDGVLPVCLRARYKEMIACQARDCFMVKTLSF
LTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILA
TEFRKGFYSEVDRMLDEDLLVGPGRQARDTLRPLAYSTLADLVHHVKDRI
DLDQVSRVIQVFSKNIHD
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mRNA from alignment at Ecto-sp9_F_contig9410:2108..4692-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig9410.17564.1 ID=mRNA_Ecto-sp9_F_contig9410.17564.1|Name=mRNA_Ecto-sp9_F_contig9410.17564.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=2585bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9410:2108..4692- (Ectocarpus species9 EcSCA_722f female)
GGCACGGCGGCGGCGGCGGCGGCCGCCGAGCCGCCGGCGATCCCGCTCCT GCCCAGCAAGGACTCGTTCAAGGTGTTGACCGAGTGCCCGCTGATCGTCA TGCTGCTGTTCCAGCTGTACCCCAAGTACATCAAGGCCAACATCCCGGAC CTCATCCCGCTGATGATCGACGCCCTGCGGCTGGCGCCGACGCTGCAGCG GGGGAGCGATGGCGTGCTGCCCGTGTGTCTGCGGGCGCGGTACAAGGAAA TGATCGCTTGCCAGGCACGTGACTGTTTCATGGTCTGGTCGGGGTTGGAT TTGTTGTTTTGGCTAAGGTGGGATTGGATGAGGCGCGGTACAATGAAATG ATTGCTCGCCAGGCAGGTTGTTTTGTCGTCGGGTTGGGTTGTTGGGTTTG TTGTTTCGGCTAAGGTGGAGGTGGTGGAATTAGATGTGGGTTGGATTTGT TGTTTCAAGCACGGCTCCAGTCGCTGTGTACGTGTTGTGCCAAATGCTGG GTCTTCGCGTGGCCGAAATGGTAAGTGATGACCCCGAGAATTTGGTTTGA GTCCAGCGGGATTAAGTCTTGACACCCAACCTACTGCTTTGTCTCACCTC TTTCCTCTCGCTCACCCGCCTCTCCCCCCTCGCTCACGCGCTGATGTTGC CAACCACACCACAGGTGAAAACCCTGAGCTTTCTCACGTACCTCCTGCGG GGATTCACGCCCCTGATGCAGCCGTACGAGAAACAGATATCCTCGAGCGT GATCAACCTGCTGAGGAGCTGCCCATCTGATGCGGTTGCCACGCGGAAGG AGCTGCTAGTGGCGACGCGGCATATTCTCGCCACGGAGTTCAGGAAGGGA TTTTACTCAGAGGTATTTATTCTGCGGAGTATGTATGTGTTCTATGCCAG GTGTTAGAGCAACGTCATTCCAATTGCGTCCGTTGAAATGTGTCCATTGT GTCCGTTGAATTGATTACTTTGAAAATATAGGATGTGTCCGTTGAAATGG GTTTGTTGAAATGGGTCCGTTGAAAATGGGTTCGTTAAAATGATTCCGTT GAAACGGGTTCGTTGTAATGGTTCCGTTGAAATGGGTCCGTTGAAATGGG TCCGTTGATTGCGTTTGTGTCTCAGCGCTCTCTCTCCCGGGCGTACGATG AAGATTTCGGATTTCTTTCTTCGGAAATGCCTGGTATCTCGCACGATTGA TTCATTTCGTATGTTCGTCTTTTAGAAATTTCTTCAACAAATGATGATCG AGCAACGGTGCTGAATTTTGAACCAACCCAATCCTATACTACACTAGCTG TAGGCCCGCACTTTTTTGTTTTTGGTACTAAAACAGGCTTGACCACATGT CCTTGGACAGTATTAATATTGGTATTATAGTCTCTCTTTGATCCTATGTA TATTTCCTCTCAGAAACAATGCCTCGTTTCTCGCGCCATGAAAACACGCA CATGGTACACAGGTTGACCGTATGCTGGACGAAGACCTCTTGGTCGGACC CGGACGTCAGGCGCGCGACACGCTGAGACCTCTCGCCTACTCCACCCTGG CCGACCTCGTGCACCACGTCAAGGATCGCATCGACCTGGACCAAGTCTCC CGGGTGATTCAGGTTCGGATCGATGAATCGTACAGTAAAAGTGTATAGCG GCGTGATTCTGGCTCAGATACATGAATGTTTGGATATTTCGAATGGCGTG ATTTAGATTCGGATGTTTGGATGTTTGGATGGCTCCGGCGGCGTGATTCA GGTTCGGATGGATGGATGTTTTGGATGGTTCGAACCGCGTGATTCATGTT ATGATGGATGTTTGCATGGTTCGAGCGGCGTGATTCAGGCTGGGATGGAT GGGTGTTTGGATGTCAATTGAGCGGCGTGATTCTGGTTTAAGAGGATGGA TGTTTGGATGCGTACGCGGCGCGTCGGTGGGTGTCCAGCACGCGCCGCCC TCAATTAGGAAAAGCCTGCTGCAGAAAGAAGGATAGGCCGAGATTGTCGC GAAGAACAAAGAACAGTGGCGGGTTTTACGCTAAATTCTACTTCTGTAGA AACCTGCTCCCGAAAGTGAAGAGAAAATGGGCCTCGTCCTGAAATATAAG AAAAAATAATGAGCCTCAACCCGGATTAATAAGAAACATATGACGTTTTC TTCGCGCGCCTGCTGCTGAAGCGTGTTTGTGCCTGTTTCCGAAGTGATTA GTTTTTTTGTTCGAGTGTGTTTTTACGTCGTGTCCAGGGCGGGTGAAATG CCATGGCACACACGGAATATTCAAGTTGTCTTATCCTCTGGATAGCGCGT CGGTGTGCGGTAAAAGGCCGGCTAATGCCCTTTGCACCTCAAATATGCGG CCTTAGCCCTGGCACTATTCGGCCTTGTACGGACACCGCTCGGCAGTGGT AGTTAGGAGAGAAAAAATAATTTTTTCCTGTGCTTGCTCTGGGCACAAAG GTAGAGGTACCATCCAGCCGCTTTGTCCTATCCCAAATATGATAGATCAT TTCGTGTTTCTTTCGGTTGTCTACGTGACGAAACCGGCTTTACTCTCGCT TCTTCTTTCAGGTGTTTTCGAAGAACATCCACGAC
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig9410:2108..4692-

>mRNA_Ecto-sp9_F_contig9410.17564.1 ID=mRNA_Ecto-sp9_F_contig9410.17564.1|Name=mRNA_Ecto-sp9_F_contig9410.17564.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1308bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9410:2108..4692- (Ectocarpus species9 EcSCA_722f female)
GGCACGGCGGCGGCGGCGGCGGCCGCCGAGCCGCCGGCGATCCCGCTCCT
GCCCAGCAAGGACTCGTTCAAGGTGTTGACCGAGTGCCCGCTGATCGTCA
TGCTGCTGTTCCAGCTGTACCCCAAGTACATCAAGGCCAACATCCCGGAC
CTCATCCCGCTGATGATCGACGCCCTGCGGCTGGCGCCGACGCTGCAGCG
GGGGAGCGATGGCGTGCTGCCCGTGTGTCTGCGGGCGCGGTACAAGGAAA
TGATCGCTTGCCAGGCACGTGACTGTTTCATGGGCACGGCGGCGGCGGCG
GCGGCCGCCGAGCCGCCGGCGATCCCGCTCCTGCCCAGCAAGGACTCGTT
CAAGGTGTTGACCGAGTGCCCGCTGATCGTCATGCTGCTGTTCCAGCTGT
ACCCCAAGTACATCAAGGCCAACATCCCGGACCTCATCCCGCTGATGATC
GACGCCCTGCGGCTGGCGCCGACGCTGCAGCGGGGGAGCGATGGCGTGCT
GCCCGTGTGTCTGCGGGCGCGGTACAAGGAAATGATCGCTTGCCAGGCAC
GTGACTGTTTCATGGTGAAAACCCTGAGCTTTCTCACGTACCTCCTGCGG
GGATTCACGCCCCTGATGCAGCCGTACGAGAAACAGATATCCTCGAGCGT
GATCAACCTGCTGAGGAGCTGCCCATCTGATGCGGTTGCCACGCGGAAGG
AGCTGCTAGTGGCGACGCGGCATATTCTCGCCACGGAGTTCAGGAAGGGA
TTTTACTCAGAGGTGAAAACCCTGAGCTTTCTCACGTACCTCCTGCGGGG
ATTCACGCCCCTGATGCAGCCGTACGAGAAACAGATATCCTCGAGCGTGA
TCAACCTGCTGAGGAGCTGCCCATCTGATGCGGTTGCCACGCGGAAGGAG
CTGCTAGTGGCGACGCGGCATATTCTCGCCACGGAGTTCAGGAAGGGATT
TTACTCAGAGGTTGACCGTATGCTGGACGAAGACCTCTTGGTCGGACCCG
GACGTCAGGCGCGCGACACGCTGAGACCTCTCGCCTACTCCACCCTGGCC
GACCTCGTGCACCACGTCAAGGATCGCATCGACCTGGACCAAGTCTCCCG
GGTGATTCAGGTTGACCGTATGCTGGACGAAGACCTCTTGGTCGGACCCG
GACGTCAGGCGCGCGACACGCTGAGACCTCTCGCCTACTCCACCCTGGCC
GACCTCGTGCACCACGTCAAGGATCGCATCGACCTGGACCAAGTCTCCCG
GGTGATTCAGGTGTTTTCGAAGAACATCCACGACGTGTTTTCGAAGAACA
TCCACGAC
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