mRNA_Ecto-sp9_F_contig940.17560.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig940.17560.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW4_ECTSI) HSP 1 Score: 1018 bits (2632), Expect = 0.000e+0 Identity = 539/648 (83.18%), Postives = 548/648 (84.57%), Query Frame = 3
Query: 228 MSKKAFRADKRPDGSLVWTEDPDKMWVLVEVLSQDNTLLRVRNKATGETREIDLGFGEAHPHNPKVVADMTSLHHIHEAGILHNLGKRAQIKDQKAYTFMGTVLIAVNPLRRLEDPPMDSFMNRPLNPETPHPYAIAELSYHQMRLGAGRKAANQSIIVSGESGAGKTESSKIILKFLTHRSVGGVTSLEQKVVDSSPILESFGNAKTLRNNNSSRFGKFLKMQFTRDKYRLAGAFIETYLLEKSRVLTQCKGERNFHILYELVKGAAKSGLAKDLQLQGVEAYRVLSASGCTELEGVDDAAHFEEVRTACRTIGLDEDTQMQMWKALAAVLHMSNVAFEGKDDAQGEVAAVKDPAPLKKLSALLGVETSLLEAMLTQREVKTMAETFTKKLEVQDASLTRDAIVKSLYEALFL---------------------------------------W-----IVRVINTSLGKGEASLPFIGVLDIFGFENFDTKNEFEQLLINFTNESLQDTFNKQVFSNELRLYEEEGIDVVVSSCPDNEECLKMLSSKPKGIIPSLDCVCSEPKPTDARYLDGLHKTYVRHQHFPRTKPKDMRECFSVKHYAGTVKYTVEGWVERNMDNIPVAFAASLGTSTHKASPLDLPSNPPPPP 2039
MSKKAFRADKRPDGSLVWTEDPDKMWVLVEVLSQDNTLLRVRNKATGET+EIDLGFGEAHPHNPKVVADMTSLHHIHEAGILHNLG+RAQIKDQKAYTFMGTVLIAVNPLRRLEDPPM+SFMNRPLNPETPHPYAIAELSYHQMRLGAGRKAANQSIIVSGESGAGKTESSKIILKFLTHRSVGGVTSLEQKVVDSSPILESFGNAKTLRNNNSSRFGKFLKMQFTRDKYRLAGAFIETYLLEKSRVLTQCKGERNFHILYELVKGAAKSGL+KDLQ+ WK LAAVLHMSNVAFEGKDDAQGEVAAVKDPA LKKLSALLGVETSLLEAMLTQREVKTMAETFTKKLEVQDASLTRDAIVKSLYE+ W IVR+INTSLGKGE SLPFIGVLDIFGFENFDTKNEFEQLLINFTNESLQDTFNKQVFSNELRLYEEEGIDVVVSSCPDNEECLKMLSSKPKGIIPSLDCVCSEPKPTDARYLDGLHKTYVRHQHFPRTKPKDMRECFSVKHYAGTVKYTVEGWVERNMD+IPVAFAASLGTSTHK+ LPSNPPPPP
Sbjct: 1 MSKKAFRADKRPDGSLVWTEDPDKMWVLVEVLSQDNTLLRVRNKATGETQEIDLGFGEAHPHNPKVVADMTSLHHIHEAGILHNLGQRAQIKDQKAYTFMGTVLIAVNPLRRLEDPPMESFMNRPLNPETPHPYAIAELSYHQMRLGAGRKAANQSIIVSGESGAGKTESSKIILKFLTHRSVGGVTSLEQKVVDSSPILESFGNAKTLRNNNSSRFGKFLKMQFTRDKYRLAGAFIETYLLEKSRVLTQCKGERNFHILYELVKGAAKSGLSKDLQV----------------------------------------------WKTLAAVLHMSNVAFEGKDDAQGEVAAVKDPAALKKLSALLGVETSLLEAMLTQREVKTMAETFTKKLEVQDASLTRDAIVKSLYESRTFVEIVDQRTFGGGGGPHVAFRPKCSGAAVAVRAVAVLHGDWRYSCGIVRIINTSLGKGEESLPFIGVLDIFGFENFDTKNEFEQLLINFTNESLQDTFNKQVFSNELRLYEEEGIDVVVSSCPDNEECLKMLSSKPKGIIPSLDCVCSEPKPTDARYLDGLHKTYVRHQHFPRTKPKDMRECFSVKHYAGTVKYTVEGWVERNMDSIPVAFAASLGTSTHKS----LPSNPPPPP 598
BLAST of mRNA_Ecto-sp9_F_contig940.17560.1 vs.
Match: Myosin (motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLA2_9PHAE) HSP 1 Score: 927 bits (2397), Expect = 0.000e+0 Identity = 482/522 (92.34%), Postives = 488/522 (93.49%), Query Frame = 3
Query: 528 GTVLIAVNPLRRLEDPPMDSFMNRPLNPETPHPYAIAELSYHQMRLGAGRKAANQSIIVSGESGAGKTESSKIILK----------FLTHRSVGGVTSLEQKVVDSSPILESFGNAKTLRNNNSSRFGKFLKMQFTRDKYRLAGAFIETYLLEKSRVLTQCKGERNFHILYELVKGAAKSGLAKDLQLQGVEAYRVLSASGCTELEGVDDAAHFEEVRTACRTIGLDEDTQMQM-----------------WKALAAVLHMSNVAFEGKDDAQGEVAAVKDPAPLKKLSALLGVETSLLEAMLTQREVKTMAETFTKKLEVQDASLTRDAIVKSLYEALFLWIVRVINTSLGKGEASLPFIGVLDIFGFENFDTKNEFEQLLINFTNESLQDTFNKQVFSNELRLYEEEGIDVVVSSCPDNEECLKMLSSKPKGIIPSLDCVCSEPKPTDARYLDGLHKTYVRHQHFPRTKPKDMRECFSVKHYAGTVKYTVEGWVERNMDNIPVAFAASLGTSTHKASPLD 2012
GTVLIAVNPLRRLEDPPM+SFMNRPLNPETPHPYAIAELSYHQMRLGAGRKAANQSIIVSGESGAGKTESSKIILK FLTHRSVGGVTSLEQKVVDSSPILESFGNAKT+RNNNSSRFGKFLKMQFTRDKYRLAGAFIETYLLEKSRVLTQCKGERNFHILYELVKGAAKSGLAKDLQLQGVEAYRVLSASGCTELEGVDDAAHFEEVRTACRTIGLDEDTQMQ+ WKALAAVLHMSNV FEGKDDAQGEVAAVKDPA LKKLSALLGVE SLLEAMLTQREVKTMAETFTKKLEVQDASLTRDAIVKSLYEALFLWIVRVINTSLGKGE SLPFIGVLDIFGFENFDTKNEFEQLLINFTNESLQDTFNKQVFSNELRLYEEEGIDVVVSSCPDNEECLK+LSSKPKGIIPSLD VCSEPKPTDARYLDGLHKTYVRHQHFPRTKPKDMRECFSVKHYAGTVKYTVEGWVERNMD+IPVAFAASLGTS HKASP +
Sbjct: 5 GTVLIAVNPLRRLEDPPMESFMNRPLNPETPHPYAIAELSYHQMRLGAGRKAANQSIIVSGESGAGKTESSKIILKRDNSAAVKKGFLTHRSVGGVTSLEQKVVDSSPILESFGNAKTMRNNNSSRFGKFLKMQFTRDKYRLAGAFIETYLLEKSRVLTQCKGERNFHILYELVKGAAKSGLAKDLQLQGVEAYRVLSASGCTELEGVDDAAHFEEVRTACRTIGLDEDTQMQVRRRRGRWLVYVCDEQMVWKALAAVLHMSNVTFEGKDDAQGEVAAVKDPAALKKLSALLGVEPSLLEAMLTQREVKTMAETFTKKLEVQDASLTRDAIVKSLYEALFLWIVRVINTSLGKGEESLPFIGVLDIFGFENFDTKNEFEQLLINFTNESLQDTFNKQVFSNELRLYEEEGIDVVVSSCPDNEECLKLLSSKPKGIIPSLDSVCSEPKPTDARYLDGLHKTYVRHQHFPRTKPKDMRECFSVKHYAGTVKYTVEGWVERNMDSIPVAFAASLGTSNHKASPRE 526
BLAST of mRNA_Ecto-sp9_F_contig940.17560.1 vs.
Match: PH (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKN0_9PHAE) HSP 1 Score: 872 bits (2252), Expect = 1.860e-300 Identity = 541/617 (87.68%), Postives = 548/617 (88.82%), Query Frame = 2
Query: 2108 MPTRVTYAELKEVLGDKAAEADKLFKGEPETALIASILWAFEVPSEAFRLGRTRVFFRAGQISTVQKILNETGPEKAPWIMKRLKDALASRQEAKXXXXXXXXXXXXXXXXXKKAEDAAAAVLGPRGGVDSSDEDSDDGVRLRHRLVPTSSSSASGVKEDDLRGLESAAKRAKTAGSTLPQIDAMVGAAREDKMGTYAEGLMDRVLAASKDAIAKVKDAAAKGADLEKTVADVRGRDEATALRRLGELLKGLHTDFKAARRTAESAVEAAAKCQVDKTRELTTASKAQATKVEGQAREVTNVARGAAQASERQRAAFEAATSKAKDADTAXXKAKTAFSSLRGFMKEAT--EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAEARGVKPPAAPTXXXXXX-EDKVSELVVIPSAAPANRRLSAISRVPSMSVKNLLDSDAVKSPVPSXXXXXDISVSDFGAGVEMIDGPRLGGMPTHMRSTSERFEEAMEDGYKEGYLMSQSKMMKRWTPRYFVLDNGFLSHYEKISLVGTKKHKTMELKADSVTRPTNQINTFGVRTGTTEWLLLARSKKEMKAWMGAITDQIHALFIREYNVPGDDYQSQG 3949
MPTRVTYAELKEVLGDKAAEADKLFKGEPETALIASILWAFEVPSEAFRLGRTRVFFRAGQISTVQKILNETGPEKAPWIMKRLKDALASRQEAKXXXXXXXXXXXXXXXX KKAE AA AVLGPRGGVDSSDEDSDDGVRLRHRLV TSSSS+SGVKEDDLRGLESAAK+AKTAGSTLPQIDAMVGAARED MGTYAEGLMDRVLAASKDAIAKVKDAAAKGADLEK VADVRGRDEATALRRLGELL+GLHTDFKAARRTAESA+EAAAKCQVDKTRELT ASKAQATKVEG+AREV NVARGAAQASERQRAAFEAA SKAK XX TAFS +EAT E XXXXXXXXXXXXXXXXXXXXXXXXX GVKPPAAPT E+KVSELVVIPSAAPANRRLSAISRVPSMSVKNLLDSDAVKSPVPS DISVS GAGVEMIDGPR GGMP HMRSTSER EEAM DGYKEGYLMSQSKMMKRWTPRYFVLDNGFLSHYE ISLVGTKKHKTMELKADSVTRP NQINTFGVRTGTTEWLLLARSK EMKAWMGAI DQIHALFIREYNVPGDDYQSQG
Sbjct: 1 MPTRVTYAELKEVLGDKAAEADKLFKGEPETALIASILWAFEVPSEAFRLGRTRVFFRAGQISTVQKILNETGPEKAPWIMKRLKDALASRQEAKXXXXXXXXXXXXXXXXLKKAEYAAEAVLGPRGGVDSSDEDSDDGVRLRHRLVLTSSSSSSGVKEDDLRGLESAAKKAKTAGSTLPQIDAMVGAAREDNMGTYAEGLMDRVLAASKDAIAKVKDAAAKGADLEKAVADVRGRDEATALRRLGELLRGLHTDFKAARRTAESAMEAAAKCQVDKTRELTDASKAQATKVEGKAREVANVARGAAQASERQRAAFEAAQSKAKXXXXXXXXXXTAFS----IYQEATDEEEVARVAALKKAEEANKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGVKPPAAPTPEEQQQGENKVSELVVIPSAAPANRRLSAISRVPSMSVKNLLDSDAVKSPVPSPTASPDISVSGLGAGVEMIDGPRAGGMPIHMRSTSERVEEAMADGYKEGYLMSQSKMMKRWTPRYFVLDNGFLSHYENISLVGTKKHKTMELKADSVTRPANQINTFGVRTGTTEWLLLARSKNEMKAWMGAIKDQIHALFIREYNVPGDDYQSQG 613
BLAST of mRNA_Ecto-sp9_F_contig940.17560.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Q7_ECTSI) HSP 1 Score: 887 bits (2292), Expect = 7.900e-297 Identity = 446/611 (73.00%), Postives = 510/611 (83.47%), Query Frame = 3
Query: 174 MPPNNTAPPAPPR---GIVSSMSKKAFRADKRPDGSLVWTEDPDKMWVLVEVLSQDNTLLRVRNKATGETREIDLGFGEAHPHNPKVVADMTSLHHIHEAGILHNLGKRAQIKDQKAYTFMGTVLIAVNPLRRLEDPPMDSFMNRPLNPETPHPYAIAELSYHQMRLGAGRKAANQSIIVSGESGAGKTESSKIILKFLTHRSVGGVTSLEQKVVDSSPILESFGNAKTLRNNNSSRFGKFLKMQFTRDKYRLAGAFIETYLLEKSRVLTQCKGERNFHILYELVKGAAKSGLAKDLQLQGVEAYRVLSASGCTELEGVDDAAHFEEVRTACRTIGLDEDTQMQMWKALAAVLHMSNVAFEGKDDAQGEVAAVKDPAPLKKLSALLGVETSLLEAMLTQREVKTMAETFTKKLEVQDASLTRDAIVKSLYEALFLWIVRVINTSLGKGEASLPFIGVLDIFGFENFDTKNEFEQLLINFTNESLQDTFNKQVFSNELRLYEEEGIDVVVSSCPDNEECLKMLSSKPKGIIPSLDCVCSEPKPTDARYLDGLHKTYVRHQHFPRTKPKDMRECFSVKHYAGTVKYTVEGWVERNMDNIPVAFAASLGTSTHK 1997
MPPN A PR G+ S S + A++ G +W EDP +W L ++SQ NT+L+VR K TG+ +IDLGFGE HPHNPKVV+DMT+LHHIHEAGIL+NLG+RA++ +Q+ YTFMGT+LIAVNPLR++ DP M +MNR L+PE PHPYAIAELSYHQMRLG GRKAANQSI+VSGESGAGKTE+SKIIL+FLTHRSVGGVT LEQKVVDSSPILESFGNAKTLRNNNSSRFGKFLKMQFT+DKYRLAGAFIETYLLEKSRVLTQ KGERNFHILYELV G A SGLA +L+L E Y++L +GC L+GVDD F+ V+ A TIG+D+DTQ+Q+WKALAAVLHMSN+ F+ D QGE+AA+ D L L++LLGVE ++LE MLTQR V+T E F K+LE DA+LTRDAIVKSLYEALFLWIV++INTSLGKGE SLPFIGVLDIFGFENFDTKNEFEQLLINFTNESLQDTFNKQVF+NEL+LYEEEGIDVVVSSCPDN CL MLS KPKGIIPSLD VC+EP P+DARYLDGLHKTY RH FPRT+PKDMR+CF VKHYAG VKYT+ GWVERNMD+IP +F +L TST K
Sbjct: 1 MPPN-----AMPRRGIGMQRSASSRLMEAERISTGEELWVEDPKVVWALASLVSQQNTILKVRRKDTGDLVDIDLGFGETHPHNPKVVSDMTALHHIHEAGILYNLGERAKLDNQRPYTFMGTILIAVNPLRKVADPEMSKYMNRSLDPEAPHPYAIAELSYHQMRLGGGRKAANQSIVVSGESGAGKTETSKIILRFLTHRSVGGVTGLEQKVVDSSPILESFGNAKTLRNNNSSRFGKFLKMQFTKDKYRLAGAFIETYLLEKSRVLTQGKGERNFHILYELVAGGAASGLATELKLGSAETYKILGENGCITLDGVDDVKQFQNVQKAFDTIGMDKDTQLQVWKALAAVLHMSNLRFDKADSEQGEIAAISDRGALATLASLLGVEEAVLEKMLTQRVVQTRVEVFVKQLEENDANLTRDAIVKSLYEALFLWIVQLINTSLGKGEESLPFIGVLDIFGFENFDTKNEFEQLLINFTNESLQDTFNKQVFNNELKLYEEEGIDVVVSSCPDNTACLVMLSDKPKGIIPSLDNVCAEPNPSDARYLDGLHKTYARHMDFPRTQPKDMRDCFWVKHYAGKVKYTIGGWVERNMDSIPQSFNDTLATSTLK 606
BLAST of mRNA_Ecto-sp9_F_contig940.17560.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPQ0_ECTSI) HSP 1 Score: 868 bits (2242), Expect = 5.890e-290 Identity = 439/582 (75.43%), Postives = 496/582 (85.22%), Query Frame = 3
Query: 261 PDGSLVWTEDP----DKMWVLVEVLSQDNTLLRVRNKATGETREIDLGFGEAHPHNPKVVADMTSLHHIHEAGILHNLGKRAQIKDQKAYTFMGTVLIAVNPLRRLEDPPMDSFMNRPLNPETPHPYAIAELSYHQMRLGAGRKAANQSIIVSGESGAGKTESSKIILKFLTHRSVGGVTSLEQKVVDSSPILESFGNAKTLRNNNSSRFGKFLKMQFTRDKYRLAGAFIETYLLEKSRVLTQCKGERNFHILYELVKGAAKSGLAKDLQLQGVEAYRVLSASGCTELEGVDDAAHFEEVRTACRTIGLDEDTQMQMWKALAAVLHMSNVAFEGKDDAQGEVAAVKDPAPLKKLSALLGVETSLLEAMLTQREVKTMAETFTKKLEVQDASLTRDAIVKSLYEALFLWIVRVINTSLGKGEASLPFIGVLDIFGFENFDTKNEFEQLLINFTNESLQDTFNKQVFSNELRLYEEEGIDVVVSSCPDNEECLKMLSSKPKGIIPSLDCVCSEPKPTDARYLDGLHKTYVRHQHFPRTKPKDMRECFSVKHYAGTVKYTVEGWVERNMDNIPVAFAASLGTSTH 1994
P G+ +W ED D++W+L EVL QDNT+L VR K TGE IDLGFGE +P NPKVVADMTSLHHIHEAGILHNL +R++++DQ+ YTFMGT+LIAVNPLRR+ +P M +M+R LNPETPHPYAIAEL+YHQMRLGAGRK ANQSI+VSGESGAGKTE+SKIIL FLTHRSVGGV SL+QKVVDSSPILESFGNAKTLRNNNSSRFGKFLK+QFT+DKYRLAGAFIETYLLEKSRVLTQ KGERNFHILY+LV GA SG+ DL+LQ VE+Y++LS S CT L+ VDDAA F V+ A TIG+ E++Q+Q+W+ LA+VLH+SNV F+ D QGE+A + D L L+ALL VE S LEAMLTQR V T ETFTK+L DA+LTRDAIVKSLYEALFLWIV VINTSLGKGE SLPFIGVLDIFGFENFDTKNEFEQLLINFTNESLQDTFNKQVF+NEL+LYEEEGIDVVVS+CPDN EC+ MLS+KPKGIIPSLD VC+EP P+DARYLDGLHKTY RHQ FPRT+P+DMRE F VKHYAG VKYTVEGWVERNMD IP +F +L STH
Sbjct: 2 PSGTEIWAEDEADGGDEVWMLAEVLRQDNTMLTVRKKRTGEELAIDLGFGETYPPNPKVVADMTSLHHIHEAGILHNLRERSKLQDQRPYTFMGTILIAVNPLRRVPNPEMTDYMDRSLNPETPHPYAIAELAYHQMRLGAGRKVANQSIVVSGESGAGKTETSKIILTFLTHRSVGGVASLDQKVVDSSPILESFGNAKTLRNNNSSRFGKFLKLQFTKDKYRLAGAFIETYLLEKSRVLTQGKGERNFHILYQLVAGA--SGVGIDLKLQDVESYKILSQSDCTTLDDVDDAAEFRTVKGAFDTIGMGEESQLQVWQMLASVLHLSNVEFDKVDHEQGEIATISDREALSTLAALLAVEESALEAMLTQRVVVTRGETFTKQLSAADANLTRDAIVKSLYEALFLWIVSVINTSLGKGEDSLPFIGVLDIFGFENFDTKNEFEQLLINFTNESLQDTFNKQVFNNELKLYEEEGIDVVVSTCPDNAECILMLSTKPKGIIPSLDNVCAEPNPSDARYLDGLHKTYARHQDFPRTQPRDMRENFWVKHYAGKVKYTVEGWVERNMDRIPESFGGTLAASTH 581
BLAST of mRNA_Ecto-sp9_F_contig940.17560.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA1_9PHAE) HSP 1 Score: 822 bits (2123), Expect = 2.810e-273 Identity = 412/594 (69.36%), Postives = 494/594 (83.16%), Query Frame = 3
Query: 219 VSSMSKKAFRADKRPDGSLVWTEDPD-KMWVLVEVLSQDNTLLRVRNKATGETREIDLGFGEAHPHNPKVVADMTSLHHIHEAGILHNLGKRAQIKDQKAYTFMGTVLIAVNPLRRLEDPPMDSFMNRPLNPETPHPYAIAELSYHQMRLGAGRKAANQSIIVSGESGAGKTESSKIILKFLTHRSVGGVTSLEQKVVDSSPILESFGNAKTLRNNNSSRFGKFLKMQFTRDKYRLAGAFIETYLLEKSRVLTQCKGERNFHILYELVKGAAKSGLAKDLQLQGVEAYRVLSASGCTELEGVDDAAHFEEVRTACRTIGLDEDTQMQMWKALAAVLHMSNVAFEGKDDAQGEVAAVKDPAPLKKLSALLGVETSLLEAMLTQREVKTMAETFTKKLEVQDASLTRDAIVKSLYEALFLWIVRVINTSLGKGEASLPFIGVLDIFGFENFDTKNEFEQLLINFTNESLQDTFNKQVFSNELRLYEEEGIDVVVSSCPDNEECLKMLSSKPKGIIPSLDCVCSEPKPTDARYLDGLHKTYVRHQHFPRTKPKDMRECFSVKHYAGTVKYTVEGWVERNMDNIPVAFAASLGTSTHK 1997
+S++S RA+ GS +WT+D + ++W + EV+ Q+NT+L VR K+TGE +IDLGFGE P NP+VV DMTSLHHIHEAGILHNL +R+++++Q+ YTFMGT+LIAVNPL+R+ P M +M++ LNPETPHPYAIAEL+YHQMRLGAGRK ANQSI+VSGESGAGKTE+SKIIL FLT RSVGG+ +L+QKVVDSSPILESFGNAKTLRNNNSSRFGKFLK+QFT+DKYRLAGAFIETYLLEKSRVLTQ GERNFHILY+LV GA S L DL+L+ VE+Y++L+ S C L+ +DD F V++A TIG+ ++Q Q+W+ LA+VLHMSN+ F+ D QGE+A++ D L L+A L VE S LEAMLTQR V T ETFTK+L +++A+LTRDAIVKSLYEALFLW+V VINTSLGKG SLPFIGVLDIFG NFDTKNEFEQLLINFTNESLQDTFNKQVF+NEL+LYE EGIDVVVS+CPDN ECLKMLSS+PKGIIPSLD VC+EP P+D+RYL LHK + RH+ FPRTKP+DMRECF V+HYAG VKYTVEGWVERNMD +P +F+++L ST K
Sbjct: 5 ISAVSGDLMRAETIAVGSDIWTDDEEGEVWTIAEVVHQENTMLTVRYKSTGEEHKIDLGFGETFPTNPRVVPDMTSLHHIHEAGILHNLRERSKLRNQRPYTFMGTILIAVNPLQRVPSPDMRDYMDKSLNPETPHPYAIAELAYHQMRLGAGRKLANQSIVVSGESGAGKTETSKIILSFLTRRSVGGIANLDQKVVDSSPILESFGNAKTLRNNNSSRFGKFLKLQFTKDKYRLAGAFIETYLLEKSRVLTQGTGERNFHILYQLVAGA--SALDDDLKLEDVESYKILAQSECVTLDCMDDTEEFATVKSAFDTIGMSAESQAQVWRMLASVLHMSNLEFDKVDHEQGEIASISDREALSTLAAFLAVEESALEAMLTQRVVVTRGETFTKQLGLEEANLTRDAIVKSLYEALFLWVVAVINTSLGKGPDSLPFIGVLDIFGALNFDTKNEFEQLLINFTNESLQDTFNKQVFNNELKLYEAEGIDVVVSNCPDNAECLKMLSSRPKGIIPSLDNVCAEPNPSDSRYLSALHKEHERHEDFPRTKPQDMRECFWVRHYAGKVKYTVEGWVERNMDRVPESFSSTLAASTSK 596
BLAST of mRNA_Ecto-sp9_F_contig940.17560.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMS5_ECTSI) HSP 1 Score: 822 bits (2122), Expect = 1.360e-271 Identity = 413/594 (69.53%), Postives = 493/594 (83.00%), Query Frame = 3
Query: 219 VSSMSKKAFRADKRPDGSLVWTEDPD-KMWVLVEVLSQDNTLLRVRNKATGETREIDLGFGEAHPHNPKVVADMTSLHHIHEAGILHNLGKRAQIKDQKAYTFMGTVLIAVNPLRRLEDPPMDSFMNRPLNPETPHPYAIAELSYHQMRLGAGRKAANQSIIVSGESGAGKTESSKIILKFLTHRSVGGVTSLEQKVVDSSPILESFGNAKTLRNNNSSRFGKFLKMQFTRDKYRLAGAFIETYLLEKSRVLTQCKGERNFHILYELVKGAAKSGLAKDLQLQGVEAYRVLSASGCTELEGVDDAAHFEEVRTACRTIGLDEDTQMQMWKALAAVLHMSNVAFEGKDDAQGEVAAVKDPAPLKKLSALLGVETSLLEAMLTQREVKTMAETFTKKLEVQDASLTRDAIVKSLYEALFLWIVRVINTSLGKGEASLPFIGVLDIFGFENFDTKNEFEQLLINFTNESLQDTFNKQVFSNELRLYEEEGIDVVVSSCPDNEECLKMLSSKPKGIIPSLDCVCSEPKPTDARYLDGLHKTYVRHQHFPRTKPKDMRECFSVKHYAGTVKYTVEGWVERNMDNIPVAFAASLGTSTHK 1997
+S++S RA+ GS +WT+D + ++W + EV+ Q+NT+L VR K+TGE +IDLGFGE P NP+VV DMTSLHHIHEAGILHNL +R+++++Q+ YTFMGT+LIAVNPL+R+ P M +M++ LNPETPHPYAIAEL+YHQMRLGAGRK ANQSI+VSGESGAGKTE+SKIIL FLT RSVGGV +L+QKVVDSSPILESFGNAKTLRNNNSSRFGKFLK+QFT DKYRLAGAFIETYLLEKSRVLTQ GERNFHILY+LV GA S L DL+L+ VE+Y++L+ S C L+ +DD F V++A TIG+ ++Q Q+W+ LA+VLHMSN+ F+ D QGE+A++ D L L+A L VE LEAMLTQR V T ETFT +L +++A+LTRDAIVKSLYEALFLW+V VINTSLGKG SLPFIGVLDIFGFENFDTKNEFEQLLINFTNESLQDTFNKQVF+NEL+LYE EGIDVVVS+CPDN ECLKMLSS+PKGIIPSLD VC+EP P+D+RYL LHK + RH+ FPRTKP+DMRECF V+HYAG VKYTVEGWVERNMD +P +F+++L ST K
Sbjct: 5 MSAVSGDLMRAETIAVGSDIWTDDEEGEVWTIAEVVHQENTMLTVRYKSTGEEHKIDLGFGETFPTNPRVVPDMTSLHHIHEAGILHNLRERSKLRNQRPYTFMGTILIAVNPLQRVPSPDMRDYMDKSLNPETPHPYAIAELAYHQMRLGAGRKMANQSIVVSGESGAGKTETSKIILSFLTRRSVGGVANLDQKVVDSSPILESFGNAKTLRNNNSSRFGKFLKLQFTTDKYRLAGAFIETYLLEKSRVLTQGTGERNFHILYQLVAGA--SALDDDLKLEDVESYKILAQSECVTLDCMDDTEEFGTVKSAFDTIGMSPESQAQVWRMLASVLHMSNLEFDKVDHEQGEIASISDREALSTLAAFLAVEEGALEAMLTQRVVVTRGETFTIQLGLEEANLTRDAIVKSLYEALFLWVVAVINTSLGKGPDSLPFIGVLDIFGFENFDTKNEFEQLLINFTNESLQDTFNKQVFNNELKLYEAEGIDVVVSNCPDNAECLKMLSSRPKGIIPSLDNVCAEPNPSDSRYLSALHKEHERHEDFPRTKPQDMRECFWVRHYAGKVKYTVEGWVERNMDRVPESFSSTLAASTSK 596
BLAST of mRNA_Ecto-sp9_F_contig940.17560.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ0_ECTSI) HSP 1 Score: 816 bits (2108), Expect = 4.720e-270 Identity = 415/598 (69.40%), Postives = 483/598 (80.77%), Query Frame = 3
Query: 204 PPRGIVSSMSKKAFRADKRPDGSLVWTEDPDKMWVLVEVLSQDNTLLRVRNKATGETREIDLGFGEAHPHNPKVVADMTSLHHIHEAGILHNLGKRAQIKDQKAYTFMGTVLIAVNPLRRLEDPPMDSFMNRPLNPETPHPYAIAELSYHQMRLGAGRKAANQSIIVSGESGAGKTESSKIILKFLTHRSVGGVTSLEQKVVDSSPILESFGNAKTLRNNNSSRFGKFLKMQFTRDKYRLAGAFIETYLLEKSRVLTQCKGERNFHILYELVKGAAKSGLAKDLQLQGVEAYRVLSASGCTELEGVDDAAHFEEVRTACRTIGLDEDTQMQMWKALAAVLHMSNVAFEGKDDAQGEVAAVKDPAPLKKLSALLGVETSLLEAMLTQREVKTMAETFTKKLEVQDASLTRDAIVKSLYEALFLWIVRVINTSLGKGEASLPFIGVLDIFGFENFDTKNEFEQLLINFTNESLQDTFNKQVFSNELRLYEEEGIDVVVSSCPDNEECLKMLSSKPKGIIPSLDCVCSEPKPTDARYLDGLHKTYVRHQHFPRTKPKDMRECFSVKHYAGTVKYTVEGWVERNMDNIPVAFAASLGTSTHK 1997
P + S+S + RA R W +D ++W+L EV+ QDNTLL VR K+TGE E+DLGFGEAH NPKVV+DMTSLHHIHEAGIL+NL +R++++ Q+ YTFMGT+LIAVNPLRR+ DP + +MNR L+PE PHPYAIAEL+YHQMRLG GRKAANQSI+VSGESGAGKTE+SKIIL FLTHRS GGV SL+QKVVDSSPILESFGNAKTLRNNNSSRFGKFLK+QFT+DK+RLAGAFIETYLLEKSRVLT GERNFH+LY+LV GA+ GL DL+L+GV +Y++LS CT L+GVDDA F+ VR A TI + E++Q+Q+W+ LAA+LH+SN+ F D QGE+A + D L L+ LLGV L MLTQR V T ETFT +L + DA+ RDAIVKSLYEALFLWIV VIN SLGKG+ LPFIGVLDIFGFENFDTKNEFEQLLINFTNESLQDTFNKQVFSNELRLY+EEGIDVVVS+CPDN ECL MLS KP GIIPSLD +C+EP P+DARYLDGLHK Y+RHQ FP+T K+MRE F VKHYAG VKYTV GWVERNMD +P +F +L TS H+
Sbjct: 5 PTMALSRSLSTRVMRA--RCFTGDTWVDDEVEVWILAEVVRQDNTLLTVRRKSTGEDIEVDLGFGEAHTANPKVVSDMTSLHHIHEAGILYNLRERSKLEGQRPYTFMGTILIAVNPLRRIPDPDVSEYMNRSLDPEAPHPYAIAELAYHQMRLGTGRKAANQSIVVSGESGAGKTETSKIILTFLTHRSAGGVASLDQKVVDSSPILESFGNAKTLRNNNSSRFGKFLKLQFTKDKHRLAGAFIETYLLEKSRVLTPGMGERNFHVLYQLVAGASDLGL--DLKLEGVGSYKILSHGDCTALDGVDDANEFKGVRAAFDTIRMSEESQLQVWQTLAAMLHLSNLEFNKVDHQQGEIADISDSETLSTLARLLGVGEGALGKMLTQRVVITRGETFTIQLGLDDANFVRDAIVKSLYEALFLWIVSVINKSLGKGDDGLPFIGVLDIFGFENFDTKNEFEQLLINFTNESLQDTFNKQVFSNELRLYKEEGIDVVVSTCPDNAECLSMLSGKPGGIIPSLDNICAEPNPSDARYLDGLHKAYLRHQDFPQTSQKNMRENFWVKHYAGKVKYTVHGWVERNMDRVPESFGTTLATSKHQ 598
BLAST of mRNA_Ecto-sp9_F_contig940.17560.1 vs.
Match: P-loop (containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7J1_9STRA) HSP 1 Score: 638 bits (1645), Expect = 1.910e-204 Identity = 339/615 (55.12%), Postives = 424/615 (68.94%), Query Frame = 3
Query: 252 DKRPDGSLVWTE-DPDKMWVLVEVLSQDNTLLRVRNKATGETREIDLGFGEAHPHNPKVVADMTSLHHIHEAGILHNLGKRAQIKDQKAYTFMGTVLIAVNPLRRLEDPPMDSFMNRPLNPETPHPYAIAELSYHQMRLGAGRKAANQSIIVSGESGAGKTESSKIILKFLTHRSVGGVTSLEQKVVDSSPILESFGNAKTLRNNNSSRFGKFLKMQFTRDKYRLAGAFIETYLLEKSRVLTQCKGERNFHILYELVKGAAKSGLAKDLQLQGVEAYRVLSASGCTELEGVDDAAHFEEVRTACRTIGLDEDTQMQMWKALAAVLHMSNVAFEGKDDAQGEVAAV-------------------------------KDPAPLKKLSALLGVETSLLEAMLTQREVKTMAETFTKKLEVQDASLTRDAIVKSLYEALFLWIVRVINTSLGKGEASLPFIGVLDIFGFENFDTKNEFEQLLINFTNESLQDTFNKQVFSNELRLYEEEGIDVVVSSCPDNEECLKMLSSKPKGIIPSLDCVCSEPKPTDARYLDGLHKTYVRHQHFPRTKPKDMRECFSVKHYAGTVKYTVEGWVERNMDNIPVAFAASLGTSTHKA 2000
+K G VWTE + + +W+ +V+SQ LL V + TG EID GF E HP NPKVVADMT+L HI+E GILHNL R+ ++DQ+ YTFMGT+LI VNPL+ + DPPM++++ + L+PE PHPYAIAEL+YHQM+LG G NQS++VSGESGAGKTE+SKII+K+L HR+ GGV L+ +V++SSPILESFGNAKTLRN NSSRFGKFLK+QFT D LAG F+ETYLLEKSRVL+Q + ERNFHILYELV GA + L K L L + Y +L SGCT LEGVDDA F V A T+GL + Q Q+W+ LAAVLH + + F ++ A+GEVA V +D + ++ LLGV + +LT R + T ETF K+ + +A+ RDA K+LYE++FLW+V+ ++ SLG+G LPFIGVLDIFGFENF +NE EQLLINFTNESLQD FNKQVF NE+ LYE+EGI+V VSSCPDN EC+K+LSSKP GII LD VC EP PTD Y LH + R QHFP K M++ F V+HYAG V+YTV+GW+ RN D IP AF L S+ +A
Sbjct: 24 EKFESGIGVWTESETEAVWLPAKVVSQKAALLTVVDDTTGARVEIDRGFAEVHPQNPKVVADMTALFHINEPGILHNLRVRSDLRDQRPYTFMGTLLICVNPLQVVPDPPMETYVGQQLDPEAPHPYAIAELAYHQMKLGTGGLT-NQSVVVSGESGAGKTETSKIIIKYLAHRTQGGVGGLDNRVIESSPILESFGNAKTLRNANSSRFGKFLKLQFTADTAALAGGFMETYLLEKSRVLSQAQNERNFHILYELVAGADPA-LKKRLGLGSAKDYHILFQSGCTTLEGVDDAEQFRGVVHAFNTVGLTAEVQEQVWRMLAAVLHTACMKFAAEETAEGEVATVPQKDQEEEAAEASAAANCGAPCDVRTARVDMRDEGQGELIAELLGVTADDVSKLLTTRTMTTHGETFVKRNGLPEAAYARDAAAKALYESVFLWVVKTVSDSLGRGAEHLPFIGVLDIFGFENF-ARNEMEQLLINFTNESLQDIFNKQVFINEIHLYEQEGIEVAVSSCPDNSECIKLLSSKPNGIITLLDAVCREPAPTDEGYTRQLHAKHARDQHFPAVHKKFMKDAFMVRHYAGRVQYTVDGWITRNNDRIPEAFQDVLAKSSLEA 635
BLAST of mRNA_Ecto-sp9_F_contig940.17560.1 vs.
Match: P-loop (containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8E2_9STRA) HSP 1 Score: 622 bits (1604), Expect = 3.620e-193 Identity = 326/601 (54.24%), Postives = 418/601 (69.55%), Query Frame = 3
Query: 261 PDGSLVWTEDPDKMWVLVEVLSQDNTLLRVRNKATGETREIDLGFGEAHPHNPKVVADMTSLHHIHEAGILHNLGKRAQIKDQKAYTFMGTVLIAVNPLRRLEDPPMDSFMNRPLNPETPHPYAIAELSYHQMRLGAGRKAANQSIIVSGESGAGKTESSKIILKFLTHRSVGGVTSLEQKVVDSSPILESFGNAKTLRNNNSSRFGKFLKMQFTRDKYRLAGAFIETYLLEKSRVLTQCKGERNFHILYELVKGAAKSGLAKDLQLQGVEAYRVLSASGCTELEGVDDAAHFEEVRTACRTIGLDEDTQMQMWKALAAVLHMSNVAFEGKDDAQGEVAAVKDPAPL--------------KKLSALLGVETSLLEAMLTQREVKTMAETFTKKLEVQDASLTRDAIVKSLYEALFLWIVRVINTSLGKG-------------EASLPFIGVLDIFGFENFDTKNEFEQLLINFTNESLQDTFNKQVFSNELRLYEEEGIDVVVSSCPDNEECLKMLSSKPKGIIPSLDCVCSEPKPTDARYLDGLHKTYVRHQHFPRTKPKDMRECFSVKHYAGTVKYTVEGWVERNMDNIPVAFAASLG 1982
P GSLVW D + W +V+ Q L + + + R +D+ + H NPKVVADMT+LHHI+E GILHNL R+ +++Q+ YT+MGT+LI VNPLR + DPPM F++ L+PE PHPYAIAEL+YHQM+LG+G NQSI+VSGESGAGKTE+SKII+K+L HR+ GGV L+Q+V++SSPILESFGNAKTLRN NSSRFGKFLK+QFT+D LAG ++ETYLLEKSRVL+Q +GERNFHILYELV GA + L + L L + Y +LS GC L+GVDDAA F +V A T+GLD TQ Q+W+ LAAVLH++ +AF+ ++ A+GEVAAV + ++ LLGV + +LT R + T ETF K+ + A+ RDA+ K+LYE++F W+VR ++ SLG+G ++LPFIGVLDIFGFENF +NE EQLLINFTNESLQD FNKQVF NE+ LY++EGI+V VS CPDN C+++LS+KP GII LD VC EP P+D R+ LH + R HFP KD + F V+HYAG V+YTVEGW+ RN D +P AF LG
Sbjct: 14 PAGSLVWAADSEGNWSQAKVVDQQEAALTITSGS--RERTMDMKQEQVHMQNPKVVADMTALHHINEPGILHNLRVRSDLRNQRPYTYMGTILICVNPLRTVPDPPMSEFLDVSLDPEKPHPYAIAELAYHQMKLGSGG-CTNQSIVVSGESGAGKTETSKIIIKYLAHRTKGGVGGLDQRVIESSPILESFGNAKTLRNANSSRFGKFLKLQFTKDTAALAGGYMETYLLEKSRVLSQARGERNFHILYELVAGADPA-LKRQLGLGSAQDYHILSQGGCIALDGVDDAAQFRDVVHAFGTVGLDAATQGQVWRLLAAVLHVACLAFDVEETAEGEVAAVPKEXXXXXXXXXXXXXXXXXQLIAELLGVSARDVSDLLTTRTMTTRGETFVKRSDPAGAAYARDAVAKALYESVFQWVVRTVSDSLGRGGGGKPQAGVEVGAASALPFIGVLDIFGFENFP-RNELEQLLINFTNESLQDIFNKQVFVNEISLYKQEGIEVAVSPCPDNSACIRLLSAKPFGIISLLDTVCREPDPSDKRFCAALHARHARDAHFPAVHKKDANDSFMVRHYAGRVRYTVEGWMARNNDRVPEAFQLQLG 609 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig940.17560.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig940.17560.1 >prot_Ecto-sp9_F_contig940.17560.1 ID=prot_Ecto-sp9_F_contig940.17560.1|Name=mRNA_Ecto-sp9_F_contig940.17560.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=726bp MPPNNTAPPAPPRGIVSSMSKKAFRADKRPDGSLVWTEDPDKMWVLVEVLback to top mRNA from alignment at Ecto-sp9_F_contig940:99..22127- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig940.17560.1 ID=mRNA_Ecto-sp9_F_contig940.17560.1|Name=mRNA_Ecto-sp9_F_contig940.17560.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=22029bp|location=Sequence derived from alignment at Ecto-sp9_F_contig940:99..22127- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig940:99..22127- >mRNA_Ecto-sp9_F_contig940.17560.1 ID=mRNA_Ecto-sp9_F_contig940.17560.1|Name=mRNA_Ecto-sp9_F_contig940.17560.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=4356bp|location=Sequence derived from alignment at Ecto-sp9_F_contig940:99..22127- (Ectocarpus species9 EcSCA_722f female)back to top |