mRNA_Ecto-sp9_F_contig9377.17537.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig9377.17537.1 vs.
Match: Ubiquitin-like (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4B4_ECTSI) HSP 1 Score: 727 bits (1877), Expect = 1.130e-262 Identity = 380/409 (92.91%), Postives = 389/409 (95.11%), Query Frame = 1
Query: 16 GELRSFHERLTKEKEQVRMNGEQLREKQLVFLRQQQTAAHSSQKLGAASGGSPQTSPRSTGRACVSPAADSVKEGGAGSSGRSGSAADAGALASQAAVGEGTTDSVGDEDENEISFSINALTGKQYTIRAFPSETVLDVKKKVQDTQDIPCEQQRIIYEGQQTNDDRTLRDCNIRNGSVAHLVLSLRKPVILLYPPAPVDIMVAVELSPLWSFSALYPKLQPRNLKQLAADYEAGSQGNVAGGQQCKWNVHASADGSLKDLSTGREYPYLFWEADSSDSRVSRSFALDGSRSFCVAGDAAGVFLDVVLERVGLNARERCDMVTCWLPRLESSRFNVIYFVEVERYEQAARLTIVPTPDVTIRVFMAFRGVHAYDAELDTAKIEELRSPAREGFVAVEWGGMNLNGVSYD 1242
GELRSFHERLTKEKEQ+RMNGEQLREKQLV LRQQQTAAHSSQKLGAASGGS QTSPRSTGRACVS AADSVKEGGAGSS RS SAADAGALASQAAVGE TTDSV DEDENEISFSI LTGKQ+TIRAFPSETVLDVKKKVQDTQ IPCEQQRIIY GQQT+DDRTLRDCNIRNGSVAHLVLSLRKPVILLYPPAPVDI VAVELSPLWSFS+LYPKLQPRNLKQLAADYEAGSQ NVAGGQQCKWNVHAS GSLKDLSTGREYPYLFWEADSSD RV+RSF LDGSRSFCVAG+AAGVFLDV LER+GLN RERCDMVTCWLP+LESSRFNVIYFVEVERYEQAARLTIVPTPDVTIRVFMAFRG HAYDAELDTAKIEELRSPAREGFVAVEWGGMNLNGVS+D
Sbjct: 45 GELRSFHERLTKEKEQLRMNGEQLREKQLVILRQQQTAAHSSQKLGAASGGSSQTSPRSTGRACVSSAADSVKEGGAGSSARSSSAADAGALASQAAVGEDTTDSVADEDENEISFSIKTLTGKQHTIRAFPSETVLDVKKKVQDTQGIPCEQQRIIYAGQQTSDDRTLRDCNIRNGSVAHLVLSLRKPVILLYPPAPVDITVAVELSPLWSFSSLYPKLQPRNLKQLAADYEAGSQANVAGGQQCKWNVHASPGGSLKDLSTGREYPYLFWEADSSDGRVTRSFGLDGSRSFCVAGEAAGVFLDVALERLGLNVRERCDMVTCWLPQLESSRFNVIYFVEVERYEQAARLTIVPTPDVTIRVFMAFRGAHAYDAELDTAKIEELRSPAREGFVAVEWGGMNLNGVSHD 453
BLAST of mRNA_Ecto-sp9_F_contig9377.17537.1 vs.
Match: Ubiquitin-like (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ27_9PHAE) HSP 1 Score: 256 bits (655), Expect = 8.040e-81 Identity = 147/208 (70.67%), Postives = 151/208 (72.60%), Query Frame = 1
Query: 346 ENEISFSIN-ALTGKQYTIRAFPSETVLDVKKKVQDTQDIPCEQQRIIYEGQQTNDDRTLRDCNIRNGSVAHLVLSLRKPVILLYPPAPVDIMVAVELSPLWSFSALYPKLQPRNLKQLAADYEAGSQGNVAGGQQCKWNVHASADGSLKDLSTGREYPYLFWEADSSDSRVSRSFALDGSRSFCVAGDAAGVFLDVVLERVGLNARE 966
ENEISFSIN LTGK YT RAFPSETVLDV KKVQDTQ IPCEQQRII GQQT+DDRTLRDCNIRNGSVAHLVLSLRKPVILLY APVDI A ADYEA VAGGQQ KWNVHAS DGSLKDL+ GREYPYLFWEADSSD RVSRSF LDGS CVAGDAAGV L V++ R G RE
Sbjct: 20 ENEISFSINNTLTGKHYTTRAFPSETVLDVNKKVQDTQGIPCEQQRIIDVGQQTSDDRTLRDCNIRNGSVAHLVLSLRKPVILLYLTAPVDITPA-------------------------ADYEA----TVAGGQQFKWNVHASPDGSLKDLTIGREYPYLFWEADSSDGRVSRSFGLDGSSLMCVAGDAAGVVLWVLVLRQGRATRE 198
BLAST of mRNA_Ecto-sp9_F_contig9377.17537.1 vs.
Match: Ubiquitin (family protein n=2 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8J338_9AGAM) HSP 1 Score: 182 bits (461), Expect = 1.570e-50 Identity = 117/321 (36.45%), Postives = 161/321 (50.16%), Query Frame = 1
Query: 367 INALTGKQYTIRAFPSETVLDVKKKVQDTQDIPCEQQRIIYEGQQTNDDRTLRDCNIRNGSVAHLVLSLR--KPVILLYPPAPVD-IMVAVELSPLWSFSALYPKLQPRNLKQLAADYEAGSQGNVAGGQQCKWNVHASADGSLKDLSTGREYPYLFWEADSSDS-----RVSR--------SFALDGSR-------SFCVAGDAAGVFLDVVLERVGLNARERCDMVTCWLPRLESSRFNVIYFVEVERYEQAARLTIVPTPDVTIRVFMAFRGVHAYDAEL------------DTAKIEELRSPAREGFVAVEWGGMNL 1224
+ LTGK T+ S+T+ +VK K+QD + P EQQR+++ G+Q DD TL D NI+ H V +LR KPV+ L+PP P + I V + L+P WSFSALYP R GGQ W V A DG+L D TGRE YLFWEA ++ + VSR + D SR S + D A ++D VL +GL+ RC +T WLP L+ + + F+ YE AA + + P+PDVT RVFM FRGV + L D ++ ++ + F +EWGGM +
Sbjct: 5 VKTLTGKTITLEVESSDTIANVKAKIQDKEGYPPEQQRLMFAGKQIEDDCTLGDYNIQKEYTIHFVSTLRGGKPVVYLFPPLPTNRIRVDLALAPAWSFSALYPSASVRP--------------TAGGGQSVAWIVDAKPDGTLSDRGTGREVSYLFWEAHTNPALPCSPAVSRPGSPVQEVAATFDPSRPVITPDNSTVIPFDKATGYIDDVLLSLGLHTEARCSFITYWLPDLQRHKHIALRFLPQSEYEAAAPMRVTPSPDVTTRVFMLFRGVEEAELTLWEGSAKGAHEWKDVVGVDIQKASDKNMFRVLEWGGMEV 311
BLAST of mRNA_Ecto-sp9_F_contig9377.17537.1 vs.
Match: Ubiquitin (family protein n=1 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8MJY2_9AGAM) HSP 1 Score: 177 bits (449), Expect = 9.200e-49 Identity = 116/321 (36.14%), Postives = 163/321 (50.78%), Query Frame = 1
Query: 367 INALTGKQYTIRAFPSETVLDVKKKVQDTQDIPCEQQRIIYEGQQTNDDRTLRDCNIRNGSVAHLVLSLR--KPVILLYPPAPVD-IMVAVELSPLWSFSALYPKLQPRNLKQLAADYEAGSQGNVAGGQQCKWNVHASADGSLKDLSTGREYPYLFWEADSSDS-----RVSR--------SFALDGSR-------SFCVAGDAAGVFLDVVLERVGLNARERCDMVTCWLPRLESSRFNVIYFVEVERYEQAARLTIVPTPDVTIRVFMAFRGVHAYDAEL------------DTAKIEELRSPAREGFVAVEWGGMNL 1224
+ LTGK+ TI S+T+ +VK K+QD +P +QQR+++ G+Q D RTL D NI+ S LV LR KPV+ L+PP P + + + + L+P WSFSALYP + R A D GQ W V A DG+L D TGRE YLFWEA ++ + VSR + D SR S + D ++D VL +GL+ RC +T WLP L+ + + F+ YE AA + + P+PDVT RVFM FRGV + L D ++ ++ + F +EWGGM +
Sbjct: 5 VKTLTGKKTTIEVESSDTIDNVKAKIQDKDGVPPDQQRLLFAGKQMEDGRTLSDYNIQRESTVILVYRLRGGKPVVYLFPPLPTNNVRIDLALTPAWSFSALYPSVPVR---PTAGD-----------GQSVAWIVDAKPDGTLSDHGTGREVSYLFWEAHTNPALPCSPAVSRPGSPVQEVASTFDPSRPVITPDNSTVLPFDKVTGYIDDVLLSLGLHTEARCSFITYWLPDLQRHKHIALRFLPQSEYEAAAPMRVTPSPDVTTRVFMLFRGVEEEELALWEGSPKGVHEWKDVVGVDVQKASDKNMFRVLEWGGMEV 311
BLAST of mRNA_Ecto-sp9_F_contig9377.17537.1 vs.
Match: Ubiquitin (fusion protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJP3_ECTSI) HSP 1 Score: 163 bits (413), Expect = 2.910e-46 Identity = 76/94 (80.85%), Postives = 85/94 (90.43%), Query Frame = 1
Query: 961 RERCDMVTCWLPRLESSRFNVIYFVEVERYEQAARLTIVPTPDVTIRVFMAFRGVHAYDAELDTAKIEELRSPAREGFVAVEWGGMNLNGVSYD 1242
RERCDMVT WLP+LESS FNVIYFV VERYE+AARLTI P PDVTIR+FMAFRG+ AYD ELDTAK+E+LR+P R+GFVAVEWGGMNLN VS+D
Sbjct: 2 RERCDMVTYWLPQLESSAFNVIYFVNVERYEKAARLTIEPAPDVTIRIFMAFRGIDAYDKELDTAKMEDLRAPGRKGFVAVEWGGMNLNRVSHD 95
BLAST of mRNA_Ecto-sp9_F_contig9377.17537.1 vs.
Match: Ubiquitin (family protein n=2 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8JUT6_9AGAM) HSP 1 Score: 169 bits (427), Expect = 1.890e-44 Identity = 111/322 (34.47%), Postives = 162/322 (50.31%), Query Frame = 1
Query: 364 SINALTGKQYTIRAFPSETVLDVKKKVQDTQDIPCEQQRIIYEGQQTNDDRTLRDCNIRNGSVAHLVLSLR--KPVILLYPPAPV-DIMVAVELSPLWSFSALYPKLQPRNLKQLAADYEAGSQGNVAGGQQCKWNVHASADGSLKDLSTGREYPYLFWEADSSDS-----RVSRSF--------ALDGSR-------SFCVAGDAAGVFLDVVLERVGLNARERCDMVTCWLPRLESSRFNVIYFVEVERYEQAARLTIVPTPDVTIRVFMAFRGVHAYDAEL------------DTAKIEELRSPAREGFVAVEWGGMNL 1224
+I + +GK+ + P +T+ DVK K QD + +P +QQR+I+ G+Q D RTL + +I+ G + H++ LR KPVI L+PP D+ V + L+ W FS LYP P ++K V GGQ W V A DG+L + TGRE YLFWEA + + VSR A D SR S + D ++D VL +GL+ RC +T WLP L+ + + F+ +YE AA + + P+PDVT RVFM FRG+ + +L D + ++ F +EWGGM +
Sbjct: 109 TIVSRSGKRTDVAYDPFDTIDDVKAKYQDKEGVPPDQQRLIFAGKQLEDGRTLSNYSIQRGDIIHMICRLRGGKPVIYLFPPVSTSDVRVDLALTSAWEFSVLYP---PTSIKST-----------VEGGQTIAWTVDAKPDGTLLEHGTGREVSYLFWEAHTKPALPLSPTVSRPGSPVQDAIEAFDPSRPIIAPTNSVVLPLDQVTGYIDDVLLSLGLHTEARCSFITYWLPDLQRHKHIALRFLPQNQYESAAPMRVTPSPDVTTRVFMLFRGIEESNLDLWGGAVKGVGEWKDIVGVNVQKATDTNIFRVLEWGGMEV 416
BLAST of mRNA_Ecto-sp9_F_contig9377.17537.1 vs.
Match: Ubiquitin-like (domain-containing protein n=1 Tax=Candolleomyces aberdarensis TaxID=2316362 RepID=A0A4Q2D1A5_9AGAR) HSP 1 Score: 167 bits (423), Expect = 1.130e-43 Identity = 107/333 (32.13%), Postives = 160/333 (48.05%), Query Frame = 1
Query: 340 EDENEISFSINALTGKQYTIRAFPSETVLDVKKKVQDTQDIPCEQQRIIYEGQQTNDDRTLRDCNIRNGSVAHLVLSLR--KPVILLYPPAPVDIMVAVELSPLWSFSALYPKLQPRNLKQLAADYEAGSQGNVAGGQQCKWNVHASADGSLKDLSTGREYPYLFWEADSSD---------------SRVSRSFA-----LDGSRSFCVAGDAAGVFLDVVLERVGLNARERCDMVTCWLPRLESSRFNVIYFVEVERYEQAARLTIVPTPDVTIRVFMAFRGVHAYDAEL----------------DTAKIEELRSPAREGFVAVEWGGMNL 1224
ED + +I L+GK + + S+TV ++K KV+D E QR+IY G+Q DD TL C I++G++ HLVL R KPVI LYPP+ + + L P W FSA+YP + + Q GQ+ +W V AS +G+LK+++T E YL+WEA+++ S V +F L+ S + +LD L+ +GL+ R +T WLP + + + F+ YE+AA L + PTPDV R+FM F+GV D E+ D ++ R F +EWGGM +
Sbjct: 121 EDSDPYHVNIQGLSGKTFRVSCSRSDTVANLKAKVEDQDGTLPEDQRLIYAGRQLADDPTLAACGIQSGAMIHLVLRQRGGKPVIYLYPPSATRVSTKLSLVPEWEFSAIYPVVPAKTTPQ---------------GQELEWVVDASPNGTLKEVNTDLEVSYLYWEAETNTHNLLSPPPSPSLIPTSNVDETFVPNRATLNAKNSVLLEVKKITPYLDTSLKALGLHVEARTSFITYWLPSILKHKHVALRFLPQSAYERAAPLNLDPTPDVVARIFMLFKGVEEEDLEIWAEASEKTRIAVDFWKDVVGVDVDRLQDASLFRVIEWGGMEV 438
BLAST of mRNA_Ecto-sp9_F_contig9377.17537.1 vs.
Match: Ubiquitin (family protein n=2 Tax=Moniliophthora roreri TaxID=221103 RepID=V2XEN0_MONRO) HSP 1 Score: 166 bits (419), Expect = 3.140e-43 Identity = 116/339 (34.22%), Postives = 160/339 (47.20%), Query Frame = 1
Query: 316 GTTDSVGDEDENEISFSINALTGKQYTIRAFPSETVLDVKKKVQDTQDIPCEQQRIIYEGQQTNDDRTLRDCNIRNGSVAHLVLSLR--KPVILLYPPAPVDIMVAVELSPLWSFSALYPKLQPRNLKQLAADYEAGSQGNVAGGQQCKWNVHASADGSLKDLSTGREYPYLFWEA------------------DSSDSRVSRSFALDGSRSFCVAGDAAGVFLDVVLERVGLNARERCDMVTCWLPRLESSRFNVIYFVEVERYEQAARLTIVPTPDVTIRVFMAFRGVHAYD----------AELDTAKIEEL------RSPAREGFVAVEWGGMNL 1224
G+ D++ E+ + I LTGK + A P ET+ +K K+QD IP ++QR+I+ G+Q D RTL D NI S HLVL R KPVI L P + V + L P W FSA+YP E G + GQ +W V DG+L +LSTG + YLFWEA SS+ + L+ + S + +LD L +GL+ R +T WLP L + + F+ YE AA L + P PDVT+R+FM FRGV A D A+LD E+ R+ ++ F +EWGGM +
Sbjct: 97 GSADALHVENSKVYTLFIKTLTGKTIRLEAAPLETIDKIKVKIQDLNGIPPDEQRLIFAGKQLEDGRTLSDYNIEKNSTIHLVLMRRGGKPVIYLLSPCEQEARVQLSLVPQWEFSAIYP----------VVPIEQGC--FPSKGQSIEWLVKTHKDGNLTELSTGADVSYLFWEALTDPDSLQMSPPPSPRMGQSSECFIPNKPVLNSANSVVLPIGMIPQYLDKALLALGLHTEARTSFITYWLPSLLKHTYVALRFLPQAVYEPAAPLNVSPPPDVTMRIFMLFRGVCAEDVAEWHESVKKADLDVEMWREIVGVDIDRALDKDLFRVLEWGGMEV 423
BLAST of mRNA_Ecto-sp9_F_contig9377.17537.1 vs.
Match: Ubiquitin-like (domain-containing protein n=1 Tax=Candolleomyces aberdarensis TaxID=2316362 RepID=A0A4Q2DIF9_9AGAR) HSP 1 Score: 163 bits (412), Expect = 3.770e-43 Identity = 114/340 (33.53%), Postives = 160/340 (47.06%), Query Frame = 1
Query: 319 TTDSVGDEDENEISFSINALTGKQYTIRAFPSETVLDVKKKVQDTQDIPCEQQRIIYEGQQTNDDRTLRDCNIRNGSVAHLVLSLR--KPVILLYPPAPVDIMVAVELSPLWSFSALYPKLQPRNLKQLAADYEAGSQGNVAGGQQCKWNVHASADGSLKDLSTGREYPYLFWEAD---------------SSDSRVSRSF-----ALDGSRSFCVAGDAAGVFLDVVLERVGLNARERCDMVTCWLPRLESSRFNVIYFVEVERYEQAARLTIVPTPDVTIRVFMAFRGVHAYDAEL----------------DTAKIEELRSPAREGFVAVEWGGMNL 1224
TT S GD+ EI I L G+ I S+T+ +VK K+QD + IP +QQ++IY G+ D RTL D + G+ +LVL LR KPVI LYPP + + L P W FSA+YP + P+N GQ+ +W V A +G+LK++ TG E YL+WEA+ SS V +F L+ + S + +LD L+ +GL+ R +T WLP L + + F+ YE+A L + PTPDV R+FM FRGV ++ D I+ R F VEWGGM +
Sbjct: 6 TTSSRGDDPPYEI--MIKTLAGRPVRIECSSSDTIGEVKAKLQDREGIPPDQQKLIYVGKLLEDGRTLSDYGVPTGATLYLVLQLRGEKPVIYLYPPIATRVSTKLSLVPEWEFSAIYPVVPPKNTPH---------------GQEVEWVVDALPNGTLKEIITGLEVSYLYWEAETTIHNMLSPPASPLLSSTGIVVENFIPNRPTLNTTNSVLLEVGKITPYLDSSLKALGLHIEARTSFITHWLPPLLKHGYVALRFLPQSVYERATPLCLEPTPDVVARIFMLFRGVDGDSLDIWAEASERTKDAVEFWKDVVGIDVDRLQDASLFRVVEWGGMEV 328
BLAST of mRNA_Ecto-sp9_F_contig9377.17537.1 vs.
Match: Ubiquitin (family protein n=1 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8MML9_9AGAM) HSP 1 Score: 160 bits (404), Expect = 3.620e-42 Identity = 114/321 (35.51%), Postives = 155/321 (48.29%), Query Frame = 1
Query: 367 INALTGKQYTIRAFPSETVLDVKKKVQDTQDIPCEQQRIIYEGQQTNDDRTLRDCNIRNGSVAHLVLSLR--KPVILLYPPAPVD-IMVAVELSPLWSFSALYPKLQPRNLKQLAADYEAGSQGNVAGGQQCKWNVHASADGSLKDLSTGREYPYLFWEADSSDS-----RVSR--------SFALDGSRSFCVAGDAAGV-------FLDVVLERVGLNARERCDMVTCWLPRLESSRFNVIYFVEVERYEQAARLTIVPTPDVTIRVFMAFRGVHAY------DAELDTAK------IEELRSPAREGFVAVEWGGMNL 1224
+ LTGK + S+TV +VK K+QD + I E QR+I+ G+Q D RTL D NI H+V LR KPV+ L+PP P + I V + L+P WSFSALYP R A D G W V A DG+L D TGRE YLFWEA ++ + VSR + D SR ++ + ++D VL +GL+ RC +T WLP L+ + + F+ YE AA + + P+PDVT RVFM FRGV D D + ++ + F +EWGGM +
Sbjct: 5 VKTLTGKTIWVEVETSDTVDNVKAKIQDKEGILPEVQRLIFAGKQMEDGRTLSDYNILKQRTIHVVTRLRGGKPVVYLFPPLPTNSIRVDLALTPAWSFSALYPSAPVR---PTAGD-----------GHSVAWIVDAKPDGTLSDHGTGREVSYLFWEAHTNPALPCSPAVSRPGSPVQEVAATFDPSRPVITPDNSTVLPFEKVTGYIDDVLLSLGLHTEARCSFITYWLPDLQRHKHIALRFLPQSEYEAAAPMRVTPSPDVTTRVFMLFRGVDEPNIGAWGDVVKDVGEWKNIVGVDVQKVTDTSIFRVLEWGGMEV 311 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9377.17537.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig9377.17537.1 >prot_Ecto-sp9_F_contig9377.17537.1 ID=prot_Ecto-sp9_F_contig9377.17537.1|Name=mRNA_Ecto-sp9_F_contig9377.17537.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=415bp MEPLQGELRSFHERLTKEKEQVRMNGEQLREKQLVFLRQQQTAAHSSQKLback to top mRNA from alignment at Ecto-sp9_F_contig9377:646..4046+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig9377.17537.1 ID=mRNA_Ecto-sp9_F_contig9377.17537.1|Name=mRNA_Ecto-sp9_F_contig9377.17537.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3401bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9377:646..4046+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig9377:646..4046+ >mRNA_Ecto-sp9_F_contig9377.17537.1 ID=mRNA_Ecto-sp9_F_contig9377.17537.1|Name=mRNA_Ecto-sp9_F_contig9377.17537.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2490bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9377:646..4046+ (Ectocarpus species9 EcSCA_722f female)back to top |