mRNA_Ecto-sp9_F_contig9256.17416.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig9256.17416.1 vs.
Match: Formin (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR06_ECTSI) HSP 1 Score: 270 bits (689), Expect = 3.450e-83 Identity = 136/145 (93.79%), Postives = 140/145 (96.55%), Query Frame = 1
Query: 4 QIVQAVITMDEEVLDMEIIRSLRQQAPTGEDITALKEFDGDHTKLGKVERFFKETMKIPRYAPRLDCMIFKGGFERDVRDLTETLDIVSTSCTQVRESKSLNRLLKMMLAVGNFLNGGTPRGGAYGFKVDVLKKFSELKVTLSRK 438
+IVQAVITMDEEVLDMEIIRSLRQQAPTGEDITALKEFDGDHTKLGKVERFFKETMKIPRYAPRLDCMIFKGGFERDVRDLTETLDIVS CTQVRESKSLNRLLKMMLAVGNFLNGGTPRGGAYGFKVDVLKKFSELK +++
Sbjct: 659 KIVQAVITMDEEVLDMEIIRSLRQQAPTGEDITALKEFDGDHTKLGKVERFFKETMKIPRYAPRLDCMIFKGGFERDVRDLTETLDIVSNCCTQVRESKSLNRLLKMMLAVGNFLNGGTPRGGAYGFKVDVLKKFSELKDVTNKR 803
BLAST of mRNA_Ecto-sp9_F_contig9256.17416.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L634_9PHAE) HSP 1 Score: 266 bits (679), Expect = 7.380e-80 Identity = 135/145 (93.10%), Postives = 139/145 (95.86%), Query Frame = 1
Query: 4 QIVQAVITMDEEVLDMEIIRSLRQQAPTGEDITALKEFDGDHTKLGKVERFFKETMKIPRYAPRLDCMIFKGGFERDVRDLTETLDIVSTSCTQVRESKSLNRLLKMMLAVGNFLNGGTPRGGAYGFKVDVLKKFSELKVTLSRK 438
+IVQAVITMDEEVLDMEIIRSLRQQAPTGEDITALKEFDGD TKLGKVERFF ETMKIPRYAPRLDCMIFKGGFERDVRDLTETLDIVS SCTQVRESKSLNRLLKMMLAVGNFLNGGTPRGGAYGFKVDVLKKFSELK +++
Sbjct: 808 KIVQAVITMDEEVLDMEIIRSLRQQAPTGEDITALKEFDGDRTKLGKVERFFLETMKIPRYAPRLDCMIFKGGFERDVRDLTETLDIVSNSCTQVRESKSLNRLLKMMLAVGNFLNGGTPRGGAYGFKVDVLKKFSELKDVTNKR 952
BLAST of mRNA_Ecto-sp9_F_contig9256.17416.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCJ0_9STRA) HSP 1 Score: 151 bits (382), Expect = 1.110e-39 Identity = 82/157 (52.23%), Postives = 110/157 (70.06%), Query Frame = 1
Query: 4 QIVQAVITMDEEVLDMEIIRSLRQQAPTGEDITALKEFDGDHTKLGKVERFFKETMKIPRYAPRLDCMIFKGGFERDVRDLTETLDIVSTSCTQ------------VRESKSLNRLLKMMLAVGNFLNGGTPRGGAYGFKVDVLKKFSELKVTLSRK 438
+IV AV+ MDEE LD++ +AP ++IT LK+FDGD KLGKVE+FF TM IPRY RL+ IFK F+ DV L ETL+I++T+ +Q V +S+SL +LL++MLA+GNFLN GTPRGGA+G+KVDVLKKF+ELK +++
Sbjct: 632 EIVGAVVRMDEEKLDLD-------KAPKDDEITTLKDFDGDKEKLGKVEKFFLLTMGIPRYTSRLEAWIFKMSFQHDVALLEETLEILNTAISQASRRTLARPLCIVEDSESLRKLLQLMLAIGNFLNAGTPRGGAFGYKVDVLKKFAELKDITNKR 781
BLAST of mRNA_Ecto-sp9_F_contig9256.17416.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F869_9STRA) HSP 1 Score: 139 bits (351), Expect = 8.960e-36 Identity = 68/134 (50.75%), Postives = 92/134 (68.66%), Query Frame = 1
Query: 19 VITMDEEVLDMEIIRSLRQQAPTGEDITALKEFDGDHTKLGKVERFFKETMKIPRYAPRLDCMIFKGGFERDVRDLTETLDIVSTSCTQVRESKSLNRLLKMMLAVGNFLNGGTPRGGAYGFKVDVLKKFSELK 420
++ M+EEV+D+E + SL PT ED TA++EF+GDH LGKVE+FF E M IPRY RL+CMIFK F + +L +LDIV + ++ ES+ RLL++ L +GNFLNGGT RGG YGFK+ L + +K
Sbjct: 146 ILKMNEEVIDIEKLNSLYALRPTSEDTTAIREFEGDHKMLGKVEKFFLEIMDIPRYDSRLECMIFKSRFPLFMSELNTSLDIVGQATKEINESRRFKRLLEVTLKLGNFLNGGTSRGGIYGFKLPSLNMLATIK 279
BLAST of mRNA_Ecto-sp9_F_contig9256.17416.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3X9P7_9STRA) HSP 1 Score: 129 bits (325), Expect = 4.180e-33 Identity = 60/126 (47.62%), Postives = 89/126 (70.63%), Query Frame = 1
Query: 43 LDMEIIRSLRQQAPTGEDITALKEFDGDHTKLGKVERFFKETMKIPRYAPRLDCMIFKGGFERDVRDLTETLDIVSTSCTQVRESKSLNRLLKMMLAVGNFLNGGTPRGGAYGFKVDVLKKFSELK 420
LD+ + SL PT ED+T +KE+ GD LGKVERFF+ M IPRY RL+C +FK F+ +L E+L+ + ++C+QV+ S+ L+ +++++L VGN+LNGGT RGGAYGFK+D + K + +K
Sbjct: 3 LDLAKVSSLYNLRPTTEDLTIIKEYPGDRKLLGKVERFFETIMDIPRYGERLECFMFKLKFKTAQEELLESLESIISACSQVKNSRCLHNIMEIVLKVGNYLNGGTSRGGAYGFKLDSMGKLATIK 128
BLAST of mRNA_Ecto-sp9_F_contig9256.17416.1 vs.
Match: Uncharacterized (protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PP39_9FUNG) HSP 1 Score: 122 bits (307), Expect = 1.400e-29 Identity = 62/139 (44.60%), Postives = 93/139 (66.91%), Query Frame = 1
Query: 4 QIVQAVITMDEEVLDMEIIRSLRQQAPTGEDITALKEFDGDHTKLGKVERFFKETMKIPRYAPRLDCMIFKGGFERDVRDLTETLDIVSTSCTQVRESKSLNRLLKMMLAVGNFLNGGTPRGGAYGFKVDVLKKFSELK 420
+I ++V+ +D+ +L ++ ++SLRQ PT E+I L+ +DGD LG ER+F E M I R A RLDCMIF+ F++DV DL++ L + ++R SK L RLL+++L +GN LN GT RG A+GF +D L K ++ K
Sbjct: 939 EIKRSVLLVDDGLLTVDNLKSLRQYIPTIEEIKLLRAYDGDRKTLGNAERYFIEMMGIDRLAERLDCMIFRRYFQKDVDDLSKELRTMEQIAVELRSSKKLKRLLRVVLKIGNHLNVGTARGNAHGFNMDTLLKLTDTK 1077
BLAST of mRNA_Ecto-sp9_F_contig9256.17416.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CQY3_PYTOL) HSP 1 Score: 122 bits (305), Expect = 2.580e-29 Identity = 60/139 (43.17%), Postives = 87/139 (62.59%), Query Frame = 1
Query: 4 QIVQAVITMDEEVLDMEIIRSLRQQAPTGEDITALKEFDGDHTKLGKVERFFKETMKIPRYAPRLDCMIFKGGFERDVRDLTETLDIVSTSCTQVRESKSLNRLLKMMLAVGNFLNGGTPRGGAYGFKVDVLKKFSELK 420
+I A+ +++ EVL E++ L +PT E+ LK +DGD LG VE+FF E + IPRY R+ C+ +K FE + + LD + + QV +S+ R+L+ +LA+GN+LNG TPRGGAYGFK+D L K LK
Sbjct: 650 EIKDAIYSLNNEVLTSEVLNVLISISPTSEEQDLLKNYDGDEKLLGNVEKFFLELLTIPRYTQRIKCIRYKFQFENRILETQAQLDTLQAATDQVTDSEKFRRVLEHILAIGNYLNGSTPRGGAYGFKLDTLTKLHALK 788
BLAST of mRNA_Ecto-sp9_F_contig9256.17416.1 vs.
Match: Uncharacterized (protein n=1 Tax=Fonticula alba TaxID=691883 RepID=A0A058Z5T8_FONAL) HSP 1 Score: 121 bits (303), Expect = 4.860e-29 Identity = 59/137 (43.07%), Postives = 92/137 (67.15%), Query Frame = 1
Query: 16 AVITMDEEVLDMEIIRSLRQQAPTGEDITALKEFDGDHTKLGKVERFFKETMKIPRYAPRLDCMIFKGGFERDVRDLTETLDIVSTSCTQVRESKSLNRLLKMMLAVGNFLNGGTPRGGAYGFKVDVLKKFSELKVT 426
AV+ MDEE L +E +R+LRQ PT E++ ++E+DGD LG ER+F+E + I RLD MI K F++ + DLT ++ ++ + ++ +SK LL+ +LA+GN++NG + RGGAYGF++D + KF+E K T
Sbjct: 1108 AVLKMDEEKLSIEQLRALRQFTPTTEEVALVREYDGDLALLGPAERYFREMISISNLETRLDAMILKRQFDKLMLDLTPEVESINKANNELLKSKVFKELLQHVLAIGNYMNGSSFRGGAYGFRIDSIIKFAETKAT 1244
BLAST of mRNA_Ecto-sp9_F_contig9256.17416.1 vs.
Match: Uncharacterized (protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G6H3_9STRA) HSP 1 Score: 119 bits (299), Expect = 1.660e-28 Identity = 59/139 (42.45%), Postives = 90/139 (64.75%), Query Frame = 1
Query: 4 QIVQAVITMDEEVLDMEIIRSLRQQAPTGEDITALKEFDGDHTKLGKVERFFKETMKIPRYAPRLDCMIFKGGFERDVRDLTETLDIVSTSCTQVRESKSLNRLLKMMLAVGNFLNGGTPRGGAYGFKVDVLKKFSELK 420
+I +A++ +D ++++ E + L Q APT E+ LK + GD LG +E+FF E M IPRY R+ C+ F FE V + LDI+S + ++ ES++ ++L+ +LA+GN+LNGGTPRG AYGFK+D L K L+
Sbjct: 655 EIKKAILNVDTDLVNSETLNVLIQTAPTLEEQDLLKNYTGDEQLLGNLEKFFLEMMSIPRYTQRIKCIRFHLSFEDRVLETQTQLDILSAATDELTESRNFRKVLEHILAIGNYLNGGTPRGAAYGFKLDTLTKLHTLR 793
BLAST of mRNA_Ecto-sp9_F_contig9256.17416.1 vs.
Match: Uncharacterized (protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VDM9_9STRA) HSP 1 Score: 119 bits (298), Expect = 2.260e-28 Identity = 59/136 (43.38%), Postives = 84/136 (61.76%), Query Frame = 1
Query: 13 QAVITMDEEVLDMEIIRSLRQQAPTGEDITALKEFDGDHTKLGKVERFFKETMKIPRYAPRLDCMIFKGGFERDVRDLTETLDIVSTSCTQVRESKSLNRLLKMMLAVGNFLNGGTPRGGAYGFKVDVLKKFSELK 420
+A+ +D + L E++ L +PT E+I LK +DGD LG VE+FF + + IPRY R+ C +K FE + + +D + + QV ES R+L+ +LA+GN+LNGGTPRGGAYGFK+D L K LK
Sbjct: 682 EAIYALDGQKLGSEVVNVLISISPTLEEIDMLKNYDGDTKLLGNVEKFFLDLLTIPRYTQRIKCFRYKLQFENRILETQAQMDTLVAATDQVTESDKFRRVLEHILAIGNYLNGGTPRGGAYGFKLDTLMKLHTLK 817 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9256.17416.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig9256.17416.1 >prot_Ecto-sp9_F_contig9256.17416.1 ID=prot_Ecto-sp9_F_contig9256.17416.1|Name=mRNA_Ecto-sp9_F_contig9256.17416.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=148bp MQIVQAVITMDEEVLDMEIIRSLRQQAPTGEDITALKEFDGDHTKLGKVEback to top mRNA from alignment at Ecto-sp9_F_contig9256:1020..2737+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig9256.17416.1 ID=mRNA_Ecto-sp9_F_contig9256.17416.1|Name=mRNA_Ecto-sp9_F_contig9256.17416.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=1718bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9256:1020..2737+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig9256:1020..2737+ >mRNA_Ecto-sp9_F_contig9256.17416.1 ID=mRNA_Ecto-sp9_F_contig9256.17416.1|Name=mRNA_Ecto-sp9_F_contig9256.17416.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=888bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9256:1020..2737+ (Ectocarpus species9 EcSCA_722f female)back to top |