mRNA_Ecto-sp9_F_contig924.17409.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig924.17409.1 vs.
Match: DNA (helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMX7_ECTSI) HSP 1 Score: 2343 bits (6071), Expect = 0.000e+0 Identity = 1219/1259 (96.82%), Postives = 1226/1259 (97.38%), Query Frame = 1
Query: 1 GVLLDPAQEDVVLLDLETPAILLTAGAGTGKTHTLAARLARILGVEPRRPTELSVDNLTAVEKAGAEIGAGVGRLGRLHVFGDEGGAGQGGLWGRSRVAAHAAAPESVLVLSFTKQGAQDVRERAIAVGVPRAQADGVWAATFHSFAATVLKQNGHLLWPESEESDLGWSAASSRRRATFGLDMIGHAEQVDLVARILGDSGRGGWDSRDDLAASSYKGDAAFEGPWSATGGGGSDGSWGMPPTKEERGKEAAQRRKELETRAKTVLSRIGVWKEQGITVEEHRSRNMEADDYTDAAAAAVYPSYQQHLRRRRQVDFADLCLMATELFTRHPEVLERYRWRFRHVLVDEYQDTSPAQQRLLKALVSGVPSKRRAASATPASISPDPAVAIGEGGDGECFDAAGTGKSEGLEHHQGLGVSLFCAGDEDQHIYGWRGTTVDHLHRHVCLLFEEDFPGAVRCALTETHRLPVHVLRSATGLMRAGGLVPLLNRRMRTKQHTPGAVVRAQGLWNSREEGKWVALEASKMNREQGISYKDMAVIARTAYNTRELEEALAARGVPYTVEGGSSFFSRGEVQAPLALLALCANPQDDEAFRRFISLRSKTRLLDWATPSTMRGVGELAVADGVSYAEGVRLSVSRGLLKGEDSSNFIYSLRRWASLLMGWQRLHEAERGAAVWRIFWEAGFLPRPVDASFAPHREGGGGPDEESIGKLATAASRCDHIGRFLLRAARAREETANKKAARKGGEGRGRGGRWEGTTGKKDKQSTTPSSEDALEMMTMHQAKGREFKVVFLTGWDEGSFPLLPNSGNGEHAVESLERVQEERRLGYVALTRASENVIITFSKKRRFNDAWIDSAGPSRFLLEMPTEYVEVSPDAIGRTLNDYPGFAGTHRLAFHEGMIEAGKLRRSRPVLMSASEIAKNEEDTPRGDDLPSGCTILNRNPALALASSDFGKPHQKSAEASDLDVAKASDGKGNSLLEAARRAVGEVGGSASKGTTPSSSVSDDSPGAAGQSETSTIPPTSAINGWPTRDESPPPRSGSKSNALEMAWSSAEAFLRSIASGGGPGEKKTERSGPKERRVDTAKVAGTQPEAPGMAPVPFGRAGEPSSPGRPQHRQAGEGAAPKALPLRYNPGPTFRKSRGRRRKALLDPSGIAAEEVVGADELLALLRDSSLQQASLKNYLRAVLAIQHGCVRGSIPVWRPDGGKKAAKGAASTSGKATLRGGLAESEATGRAALSTCSAQDLTNYIVTLLDARNKGGA 3777
VLLDPAQEDVVLLDLETPAILLTAGAGTGKTHTLAARLARILGVEPRRPTELSVDNLTAVEKAGA IGAGVGRLGRLHVFGDEGGAG+GGLWG RVAAHAAAPESVLVLSFTKQGAQDVRERAIAVGVPRAQAD VWAATFHSFAATVLKQNGHLLWPESEESDLGWSAASSRRRATFGLDMIGHAEQVDLVARIL DS RGGWDSRDDLAA+SYKGDAAFEGPWSAT GG S+GSWGMPPTKEERGKE AQRRKELETRAKTVLSRIGVWKEQGITVEEHRS NMEADDYTDAAAAAVYPSYQQHLRRRRQVDF DLCLM TELFTRHPEVLERYRWRFRHVLVDEYQDTSPAQQRLLKALVSGVPSKRRAASATPASISPDPAVAIGEGGDGECF AAGTGKSEGLEHHQGLGVSLFCAGDEDQHIYGWRGTTVDHLHR FEEDFPGAVRCALTETHRLPVHVLRSATGLMRAGGLVPLLNRRMRTKQHTPGAVVRAQGLWNSREEGKWVALEASKMNREQGISYKDMAVIARTAYNTRELEEALAARGVPYTVEGGSSFFSRGEVQAPLALLALCANPQDDEAFRRFISLRSKTRLLDWATPSTMRGVGELAVADGVSYAEGVRLSVSRGLLKGEDSSNFIY LRRWASLLMGWQRLHEAERGAAVWRIFWEAGFLPRPVDASFAPHR GGGGPD+ESIGKLATAASRCDHIGRFLLRAARAREETANKKAARKGGEGRGRGGRWEGTTGKKDKQSTTPSSEDALEMMTMHQAKGREFKVVFLTGWDEGSFPLLPNSG+GEHAVESLERVQEERRLGYVALTRASENVIITFSKKRRFNDAWIDSAGPSRFLLEMPTEYVEVSPDAIGRTLNDYPGFAGTHRLAFH GMIEAGKLRRSRPVLMSASEIAKNEEDTPRGDDLPSGCTILNRNPALALASSDF KPH KSAEASDLD AKASDGKGNSLLEAARRAVGEVGGSASKGTTPSSSV+DDS GAAGQSETSTIPPTSA+NG PTRDESPPPRSGSKSNALEMAWSSAEAFLRSIASGGGPGEKKTERSG KE RVDTAKVAGTQPEAPGMAPVPFGRAGEPSSPGRPQHRQAGEGAAPKA PLRYNPGPTFRKSRGRRRKALLDPSGI AEEVVGADELLALL DSSLQQASLKNYLRAVLAIQHGCVRGSIPVWRPDGGKKAAKGAASTSGKA LRGGLAESEATGRAALSTCSAQDLTNYIVTLLDARNKGGA
Sbjct: 65 SVLLDPAQEDVVLLDLETPAILLTAGAGTGKTHTLAARLARILGVEPRRPTELSVDNLTAVEKAGAGIGAGVGRLGRLHVFGDEGGAGKGGLWGHRRVAAHAAAPESVLVLSFTKQGAQDVRERAIAVGVPRAQADRVWAATFHSFAATVLKQNGHLLWPESEESDLGWSAASSRRRATFGLDMIGHAEQVDLVARILADSDRGGWDSRDDLAAASYKGDAAFEGPWSATAGGRSNGSWGMPPTKEERGKETAQRRKELETRAKTVLSRIGVWKEQGITVEEHRSTNMEADDYTDAAAAAVYPSYQQHLRRRRQVDFGDLCLMVTELFTRHPEVLERYRWRFRHVLVDEYQDTSPAQQRLLKALVSGVPSKRRAASATPASISPDPAVAIGEGGDGECFGAAGTGKSEGLEHHQGLGVSLFCAGDEDQHIYGWRGTTVDHLHR-----FEEDFPGAVRCALTETHRLPVHVLRSATGLMRAGGLVPLLNRRMRTKQHTPGAVVRAQGLWNSREEGKWVALEASKMNREQGISYKDMAVIARTAYNTRELEEALAARGVPYTVEGGSSFFSRGEVQAPLALLALCANPQDDEAFRRFISLRSKTRLLDWATPSTMRGVGELAVADGVSYAEGVRLSVSRGLLKGEDSSNFIYGLRRWASLLMGWQRLHEAERGAAVWRIFWEAGFLPRPVDASFAPHRGGGGGPDQESIGKLATAASRCDHIGRFLLRAARAREETANKKAARKGGEGRGRGGRWEGTTGKKDKQSTTPSSEDALEMMTMHQAKGREFKVVFLTGWDEGSFPLLPNSGDGEHAVESLERVQEERRLGYVALTRASENVIITFSKKRRFNDAWIDSAGPSRFLLEMPTEYVEVSPDAIGRTLNDYPGFAGTHRLAFH-GMIEAGKLRRSRPVLMSASEIAKNEEDTPRGDDLPSGCTILNRNPALALASSDFVKPHHKSAEASDLDAAKASDGKGNSLLEAARRAVGEVGGSASKGTTPSSSVADDSAGAAGQSETSTIPPTSALNGRPTRDESPPPRSGSKSNALEMAWSSAEAFLRSIASGGGPGEKKTERSGRKESRVDTAKVAGTQPEAPGMAPVPFGRAGEPSSPGRPQHRQAGEGAAPKASPLRYNPGPTFRKSRGRRRKALLDPSGITAEEVVGADELLALLGDSSLQQASLKNYLRAVLAIQHGCVRGSIPVWRPDGGKKAAKGAASTSGKAALRGGLAESEATGRAALSTCSAQDLTNYIVTLLDARNKGGA 1317
BLAST of mRNA_Ecto-sp9_F_contig924.17409.1 vs.
Match: DNA (helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX3_9PHAE) HSP 1 Score: 707 bits (1826), Expect = 4.710e-242 Identity = 379/453 (83.66%), Postives = 386/453 (85.21%), Query Frame = 1
Query: 862 MEADDYTDAAAAAVYPSYQQHLRRRRQVDFADLCLMATELFTRHPEVLERYRWRFRHVLVDEYQDTSPAQQRLLKALVSGVPSKRRAASATPASISPDPAVAIGEGGDGECFDAAGTGKSEGLEHHQGLGVSLFCAGDEDQHIYGWRGTTVDHLHRHVCLLFEEDFPGAVRCALTETHRLPVHVLRSATGLMRAGGLVPLLNRRMRTKQHTPGAVVRAQGLWNSREEGKWVALEASKMNREQGISYKDMAVIARTAYNTRELEEALAARGVPYTVEGGSSFFSRGEVQAPLALLALCANPQDDEAFRRFISLRSKTRLLDWATPSTMRGVGELAVADGVSYAEGVRLSVSRGLLKGEDSSNFIYSLRRWASLLMGWQRLHEAERGAAVWRIFWEAGFLPRPVDASFAPHREGGGGP--------DEESIGKLATAASRCDHIGRFLLRAARAR 2196
MEADDYTDAAAAAVYPSYQQHLRRRRQVDF DLCLMATELFTRHPEVLERYRWRFRHVLVDEYQDTSPAQQRLLKALVSGVPSKRRA+SATPASISPDPAVA+ EG DGECFDAAGTGK EGLEHHQGLGVSLFCAGDEDQHIYGWRGTTVDHLHRHV F G L P R+A +R G P +RR R Q REEGKWVALEASKMNREQGISYKDMAVIARTAYNTRELEEALAARGVPYTVEGGSSFFSRGEVQAPLALLALCANPQDDEAFRRFISLRSKTRLLDWATPSTMRGVGELAVADGVSYAEGVRLSVSRGLLKGEDSSNFIY LRRWASLLMGWQRLH+AERGAAVWRIFWEAGFLPRPVDASFA HR G GP D+ESIGKLATAASRCDHIGRFLLRAARAR
Sbjct: 1 MEADDYTDAAAAAVYPSYQQHLRRRRQVDFGDLCLMATELFTRHPEVLERYRWRFRHVLVDEYQDTSPAQQRLLKALVSGVPSKRRASSATPASISPDPAVAMSEGEDGECFDAAGTGKGEGLEHHQGLGVSLFCAGDEDQHIYGWRGTTVDHLHRHV----RGRFSGGREVRLDGDP--PPTRARAA---VRDG---PHASRRARAPSQPTDE---DQAAHARREEGKWVALEASKMNREQGISYKDMAVIARTAYNTRELEEALAARGVPYTVEGGSSFFSRGEVQAPLALLALCANPQDDEAFRRFISLRSKTRLLDWATPSTMRGVGELAVADGVSYAEGVRLSVSRGLLKGEDSSNFIYGLRRWASLLMGWQRLHDAERGAAVWRIFWEAGFLPRPVDASFASHRGGRRGPVGGSRMTKDQESIGKLATAASRCDHIGRFLLRAARAR 438
BLAST of mRNA_Ecto-sp9_F_contig924.17409.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI7_9PHAE) HSP 1 Score: 585 bits (1508), Expect = 9.790e-196 Identity = 320/362 (88.40%), Postives = 332/362 (91.71%), Query Frame = 1
Query: 2692 MIEAGKLRRSRPVLMSASEIAKNEEDTPRGDDLPSGCTILNRNPALALASSDFGKPHQKSAEASDLDVAKASDGKGNSLLEAARRAVGEVGGSASKGTTPSSSVSDDSPGAAGQSETSTIPPTSAINGWPTRDESPPPRSGSKSNALEMAWSSAEAFLRSIASGGGPGEKKTERSGPKERRVDTAKVAGTQPEAPGMAPVPFGRAGEPSSPGRPQHRQAGEGAAPKALPLRYNPGPTFRKSRGRRRKALLDPSGIAAEEVVGADELLALLRDSSLQQASLKNYLRAVLAIQHGCVRGSIPVWRPDGGKKAAKGAASTSGKATLRGGLAESEATGRAALSTCSAQDLTNYIVTLLDARNKGGA 3777
MIEAGKLRRSRPVLMSASEIAKNEEDTPRGDDLPSGCTILNRNP+L LASSDF KPHQKS +ASDL+V KASDGKGNSLLEAARR VGEVGGSA+K TTPSSSVSDDSPGAAGQ ETSTIPPTSA NG PTRDESPPP+SGSKSNALEMAWSSAEAFLRSIASGGGPGEKK RSG +E VDT KVAGTQ EAPG PVPFGRAGE SSPGRPQHRQAG GAAPKA PLRYNPGPTFRKSRGRRRKALLDPSGI AE+VVGADELLALLRDSSLQQASLKNYLRA+LAIQ+GCVRGSIPVWRP GKKA KGA STS +A LRGGLAESEATGRAALSTCSAQDLT+YI+TL DAR KGGA
Sbjct: 1 MIEAGKLRRSRPVLMSASEIAKNEEDTPRGDDLPSGCTILNRNPSLTLASSDFVKPHQKSTKASDLEVVKASDGKGNSLLEAARRGVGEVGGSAAKETTPSSSVSDDSPGAAGQLETSTIPPTSAPNGRPTRDESPPPKSGSKSNALEMAWSSAEAFLRSIASGGGPGEKKAGRSGRRESHVDTVKVAGTQTEAPGK-PVPFGRAGESSSPGRPQHRQAGGGAAPKASPLRYNPGPTFRKSRGRRRKALLDPSGITAEKVVGADELLALLRDSSLQQASLKNYLRAILAIQYGCVRGSIPVWRPVDGKKATKGADSTSDEAALRGGLAESEATGRAALSTCSAQDLTSYIITLHDARTKGGA 361
BLAST of mRNA_Ecto-sp9_F_contig924.17409.1 vs.
Match: DNA (helicase (Fragment) n=1 Tax=Reyranella sp. CPCC 100927 TaxID=2599616 RepID=A0A5C5S9A4_9HYPH) HSP 1 Score: 242 bits (617), Expect = 3.920e-63 Identity = 193/634 (30.44%), Postives = 299/634 (47.16%), Query Frame = 1
Query: 787 AKTVLSRIGVWKEQGITVEEHRSRNMEADDYTDAAAAAVYPSYQQHLRRRRQVDFADLCLMATELFTRHPEVLERYRWRFRHVLVDEYQDTSPAQQ---RLLKALVSGVPSKRRAASATPASISPDPAVA---IGEGGD-----GECFDAAGTGKSEGLEHHQGLGVS---LFCAGDEDQHIYGWRGTTVDHLHRHVCLLFEEDFPGAVRCALTETHRLPVHVLRSATGLMRAGGLVPLLNRRMRTKQHTPGAVVRAQGLWNSREEGKWVALEASKMNREQGISYKDMAVIARTAYNTRELEEALAARGVPYTVEGGSSFFSRGEVQAPLALLALCANPQDDEAFRRFISLRSKTRLLDWATPSTMRGVGELAVADGVSYAEGVRLSVSRGLLKGEDSS---NFIYSLRRWASLLMGWQRLHEAER--GAAVWRIFWEAGFLPRPVDASFAPHREGGGGPDEESIGKLATAASRCDHIGRFLLRAARAREETANKKAARKGGEGRGRGGRWEGTTGKKDKQSTTPSSEDALEMMTMHQAKGREFKVVFLTGWDEGSFPLLPNSGNGEHAVES--LERVQEERRLGYVALTRASENVIITFSKKRRFNDAWIDSAGPSRFLLEMPTEYVEVSPDA 2625
A+ + I WK++ T ++ + + +A+ + D A +Y YQ L DF DL + LF +HP+VL Y RFR++LVDEYQDT+ AQ RLL G P +A +S+ P + +GEGG G G H + L S + C GD+DQ IYGWRG V ++ R FE+DFPGA L +R H+L +A+ L+ L + + T++ T G +R +G+W+ EE + + E + RE+ + +++A++ R A+ TRE EE GVPY V GG F+ R E++ LA L + P DD AF R ++ + ST++ + ++ VS E R ++ L+ + + + + RW ++L G + AE + + W+ P AP R E++ +L A +++ FL + E N ++ D + +MTMH AKG EF VFL GW+EG FP + A++ L ++EERRL YVALTRA +NV ++F+ RR + W +A PSRF+ E+P +++E S DA
Sbjct: 169 ARILSGIIQRWKDRAQTPDKVSTGDDQAE-FADGRAVEIYRQYQARLLAVNAADFGDLVMHCVTLFQQHPDVLADYHRRFRYILVDEYQDTNVAQYLWLRLLAQKTQGTP------AAHDSSLPPXXXXSRGRVGEGGPQAPHAGVEAPRPSPPPQGGRGHEERLAPSASNICCVGDDDQSIYGWRGAEVGNILR-----FEKDFPGAAIIRLERNYRSTPHILAAASTLI--ANNEGRLGKTLWTEE-TEGEKLRLRGVWDGDEEARVIGEEIEALQREKH-ALREIAILVRAAFQTREFEERFMTLGVPYKVVGGPRFYERQEIRDALAYLRVVQQPDDDLAFERIYNVPKRG-----LGESTLKTLRDIQKTQRVSLFEAARRALETDELRPQARKTLGDLVKNFERWRTMLDGISHVEVAETLLDESGYTEMWQRDRSPE------APGRL-------ENLKELINALQEFENLQGFLEHVSLVTEGNQN-------------------------------ANGDMVTIMTMHAAKGLEFDTVFLPGWEEGLFP-------NQRALDDKGLSGLEEERRLAYVALTRARKNVHVSFAANRRVFNQW-QAAIPSRFIGELPQDHLEASSDA 729
BLAST of mRNA_Ecto-sp9_F_contig924.17409.1 vs.
Match: DNA (helicase n=1 Tax=Vineibacter terrae TaxID=2586908 RepID=A0A5C8PCV3_9HYPH) HSP 1 Score: 242 bits (618), Expect = 9.050e-63 Identity = 197/634 (31.07%), Postives = 295/634 (46.53%), Query Frame = 1
Query: 787 AKTVLSRIGVWKEQGITVEEHRSRNMEADDYTDAAAAAVYPSYQQHLRRRRQVDFADLCLMATELFTRHPEVLERYRWRFRHVLVDEYQDTSPAQQRLLKALVSGVPS----------KRRAASATPASISPDPAVAIGEGGDGECFDAAGTG-KSEGLEHHQGLGVSLFCAGDEDQHIYGWRGTTVDHLHRHVCLLFEEDFPGAVRCALTETHRLPVHVLRSATGLM--RAGGLVPLLNRRMRTKQHTPGAVVRAQGLWNSREEGKWVALEASKMNREQGISYKDMAVIARTAYNTRELEEALAARGVPYTVEGGSSFFSRGEVQAPLALLALCANPQDDEAFRRFISLRSKTRLLDWATPSTMRGVGELAVADGVSYAEGVRLSVSRGLLKGEDSSNF---IYSLRRWASLLMGWQRLHEAER--GAAVWRIFWEAGFLPRPVDASFAPHREGGGGPDEESIGKLATAASRCDHIGRFLLRAARAREETANKKAARKGGEGRGRGGRWEGTTGKKDKQSTTPSSEDALEMMTMHQAKGREFKVVFLTGWDEGSFP---LLPNSGNGEHAVESLERVQEERRLGYVALTRASENVIITFSKKRRFNDAWIDSAGPSRFLLEMPTEYVEVSPDA 2625
A+ + I WK++ ++ + + +A+ + D A +Y YQ+ LR DF DL ++ LF +HP+VL Y RFR++LVDEYQDT+ AQ L+ L G + + R A S+SP A ++ + +G ++ G + + C GD+DQ IYGWRG V ++ R FE+DFPGA L +R H+L +A+ L+ G L L + G VR +G+W+ EE + + E + RE+ + +++A++ R A+ TRE EE GVPY V GG F+ R E++ LA L + P DD AF R ++ K L D ST++ + ++ VS E R ++ L+ + + + RW S+L G + AE + + W+ P AP R E++ +L A +++ FL A E N S+ D + +MTMH AKG EF VFL GW+EG FP L + G V LE EERRL YVALTRA NV ++F+ RR + W +A PSRF+ E+P ++E S DA
Sbjct: 172 ARILSGIIQRWKDRAQGPDQVGTGDDQAE-FADGRAVEIYRQYQERLRAVNAADFGDLVMLCVSLFQQHPDVLAEYHRRFRYILVDEYQDTNVAQYLWLRLLAQGAQTSLPPEGEGAPQGRKGDARTDSMSPSGADSVAPSPFRRSAPPSPSGGRTTGASN-------ICCVGDDDQSIYGWRGAEVGNILR-----FEKDFPGAQIIRLERNYRSTPHILAAASHLIAHNEGRLGKTL-----WTESKEGDKVRLRGVWDGDEEARVIGEEVEALQREKH-ALREIAILVRAAFQTREFEERFMTLGVPYRVVGGPRFYERQEIRDALAYLRVVVQPDDDLAFERIYNV-PKRGLGD----STLKTLRDIQKTQRVSLFEAARRALETDELRPQARKTLGGLVKNFERWRSMLDGMSHIEVAETLLDESGYTEMWQRDRSPE------APGRL-------ENLKELINALQEFENLQGFLEHVALVTEGNQN-------------------------------SNGDMVTIMTMHAAKGLEFDTVFLPGWEEGLFPNQRALDDKG-----VSGLE---EERRLAYVALTRARRNVHVSFAANRRVFNQW-QAAIPSRFIGELPEAHLEASSDA 728
BLAST of mRNA_Ecto-sp9_F_contig924.17409.1 vs.
Match: DNA (helicase n=1 Tax=Sneathiella sp. TaxID=1964365 RepID=A0A2D8HLB6_9PROT) HSP 1 Score: 231 bits (589), Expect = 8.200e-60 Identity = 175/601 (29.12%), Postives = 271/601 (45.09%), Query Frame = 1
Query: 808 IGVWKEQGITVEEHRSRNMEADDYTDAAAAAVYPSYQQHLRRRRQVDFADLCLMATELFTRHPEVLERYRWRFRHVLVDEYQDTSPAQQRLLKALVSGVPSKRRAASATPASISPDPAVAIGEGGDGECFDAAGTGKSEGLEHHQGLGVSLFCAGDEDQHIYGWRGTTVDHLHRHVCLLFEEDFPGAVRCALTETHRLPVHVLRSATGLMRAGGLVPLLNRRMRTKQHTPGAVVRAQGLWNSREEGKWVALEASKMNREQGISYKDMAVIARTAYNTRELEEALAARGVPYTVEGGSSFFSRGEVQAPLALLALCANPQDDEAFRRFISLRSKTRLLDWATPSTMRGVGELAVADGVSYAEGVRLSVSRGLLKGEDSSNFIYSLRRWASLLMGWQRLHE-AERGAAVWRIFWEAGFLPRPVDASFAPHREGGGGPDEESIGKLATAASRCDHIGRFLLRAARAREETANKKAARKGGEGRGRGGRWEGTTGKKDKQSTTPSSEDALEMMTMHQAKGREFKVVFLTGWDEGSFPLLPNSGNGEHAVESLERVQEERRLGYVALTRASENVIITFSKKRRFNDAWIDSAGPSRFLLEMPTEYV 2607
I WK++G+ ++ ++ D A Y YQQ L + DF DL L LF +HP++L Y+ RF+++LVDEYQDT+ AQ LL+ L + H+ ++ C GD+DQ IYGWRG V ++ L FE+DFPGA L +R H+L +A+GL+ L + + T+ + GA V + W+ + E +WVA E + R+ G KDMA++ R ++ TR+ EE + G+ Y V GG F+ R E++ LA L + P DD AF R +L R L +R +G A G+S + +V +G KG+ S SL+ + W+ + V + ++G+ + EG E++ +L A + + +FL + E A+K +D + +MT+H AKG E+ V+FL GW+EG FP E+ V++LE EERRL YV +TRA + I+ + RR + W S+ PSRF+ E+P E++
Sbjct: 164 IDRWKDKGLRPDQVSGTG--GSEFADGKGIAFYKRYQQRLAEQNACDFGDLLLHVLTLFQKHPDILSLYQQRFKYILVDEYQDTNVAQYLLLRLLA---------------------------------------------QRHR----NICCVGDDDQSIYGWRGAEVGNI-----LKFEDDFPGARVIRLERNYRSTSHILGAASGLIAQNE--GRLGKTLYTEDNE-GAPVTLKSHWDGQSEARWVAEEIEALERK-GTRTKDMAILVRASFQTRDFEECFLSLGIKYRVIGGLRFYERREIRDVLAYLRVINQPDDDLAFERIYNLPK--RGLGERALEKLREIGRGA---GLSLSRAADFAVEQGFFKGKAHS----SLKELSENFHNWRAQQDLVATDELVETVLEDSGYFDM-WQQDTSTEAEG----KRENLKELIRAVGEYESLSQFLEHVSLVMENNADK-------------------------------GDDMVSLMTLHAAKGLEYDVIFLPGWEEGLFPH--QRALDENGVKALE---EERRLAYVGITRAKKRCFISHASNRRIHGQW-QSSLPSRFVDELPKEHI 653
BLAST of mRNA_Ecto-sp9_F_contig924.17409.1 vs.
Match: DNA (helicase n=3 Tax=Sphingomonas TaxID=13687 RepID=A0A7X5Y8B1_9SPHN) HSP 1 Score: 228 bits (580), Expect = 1.330e-58 Identity = 191/631 (30.27%), Postives = 276/631 (43.74%), Query Frame = 1
Query: 787 AKTVLSRIGVWKEQGITVEEHRSRNMEADDYTDAAAAAVYPSYQQHLRRRRQVDFADLCLMATELFTRHPEVLERYRWRFRHVLVDEYQDTSPAQQRLLKALVSGVPSKRRAASATPASISPDPAVAIGEGGDGECFDAAGTGKSEGLEHHQGLGVSLFCAGDEDQHIYGWRGTTVDHLHRHVCLLFEEDFPGAVRCALTETHRLPVHVLRSATGLMRAGGLVPLLNRRMRTKQHTPGAVVRAQGLWNSREEGKWVALEASKMNREQGISYKDMAVIARTAYNTRELEEALAARGVPYTVEGGSSFFSRGEVQAPLALLALCANPQDDEAFRRFISLRSKTRLLDWATPSTMRGVGELAVADGVSYAEG----VRLSVSRGLLKGEDSSNFIYSLRRWASLLMGWQRLHEAERGAA------------VWRIFWEAGFLPRPVDASFAPHREGGGGPDEESIGKLATAASRCDHIGRFLLRAARAREETANKKAARKGGEGRGRGGRWEGTTGKKDKQSTTPSSEDALEMMTMHQAKGREFKVVFLTGWDEGSFPLLPNSGNGEHAVESLERVQEERRLGYVALTRASENVIITFSKKRRFNDAWIDSAGPSRFLLEMPTEYVEVSPDAIG 2631
A+ + S I WK +G+T ++ + EA + + A +Y YQ L+ DF DL L +F H +VLERYR RF+++LVDEYQDT+ Q LK L RR +L C GD+DQ IY WRG V ++ R FE DFPGA L + +R H+L +A+GL+ L + + T+ T G V+ G+W+ EE + V EA + R +S D+A++ R + TRE EE A G+PY + GG F+ R E++ LA L L +P DD AF R ++ TP RG+G+ AVA YA + L+ ++ L E + SL R+ W+++H A + ++ E+G+ A+ R E++ +L A +++ FL + + A+K S D + +MT+H AKG EF +V+L GW+EG FP G A SLE EERRL YVA+TRA E I + RR W S PSRF+ E+P E+VE G
Sbjct: 147 ARQLASCIDRWKNKGLTPDQVDAGEAEA--FANGRGADLYAQYQARLKAVNACDFGDLLLHMLVIFRTHEDVLERYRTRFKYLLVDEYQDTNAVQYEWLKLLAE----PRR---------------------------------------------NLCCVGDDDQSIYSWRGAEVANILR-----FERDFPGAAVIRLEQNYRSTPHILGAASGLIANNS--GRLGKDLWTEVDT-GEKVKVVGVWDGPEEARRVGEEAEQHQRRGSLS--DIAILVRAQFQTREFEERFIAIGLPYQIVGGFRFYERAEIRDALAYLRLVQSPSDDLAFERIVN-----------TPK--RGLGDKAVATIHRYARASGQPLLLAAAQMLDSDELTPQAKRSLGRFVGDFARWRQMHLAAADTSPSPGAPPPHAELARQLLDESGYT-----AALQNERTAEASGRLENLAELTRAMEEYENLPSFLEHVSLVMDNDADK-------------------------------SGDKVTIMTIHAAKGLEFPIVYLAGWEEGVFPSQRALDEGGTA--SLE---EERRLAYVAITRAREKATIFHAANRRIYGQWTSSI-PSRFVGELPKEHVEEETTMTG 661
BLAST of mRNA_Ecto-sp9_F_contig924.17409.1 vs.
Match: DNA (helicase n=1 Tax=Dongia mobilis TaxID=578943 RepID=A0A4R6WKV6_9PROT) HSP 1 Score: 227 bits (579), Expect = 1.410e-58 Identity = 190/617 (30.79%), Postives = 274/617 (44.41%), Query Frame = 1
Query: 787 AKTVLSRIGVWKEQGITVEEHRSRNMEADDYTDAAAAAVYPSYQQHLRRRRQVDFADLCLMATELFTRHPEVLERYRWRFRHVLVDEYQDTSPAQQRLLKALVSGVPSKRRAASATPASISPDPAVAIGEGGDGECFDAAGTGKSEGLEHHQGLGVSLFCAGDEDQHIYGWRGTTVDHLHRHVCLLFEEDFPGAVRCALTETHRLPVHVLRSATGLMRAGGLVPLLNRRMRTKQHTPGAVVRAQGLWNSREEGKWVALEASKMNREQGISYKDMAVIARTAYNTRELEEALAARGVPYTVEGGSSFFSRGEVQAPLALLALCANPQDDEAFRRFISLRSKTRLLDWATPSTMRGVGELAVADGVSYAEGVRLSVSRGLLKGEDS---SNFIYSLRRWASLLMGWQRLHEAERGAAV-----WRIFWEAGFLPRPVDASF-APHREGGGGPDEESIGKLATAASRCDHIGRFLLRAARAREETANKKAARKGGEGRGRGGRWEGTTGKKDKQSTTPSSEDALEMMTMHQAKGREFKVVFLTGWDEGSFPLLPNSGNGEHAVESLERVQEERRLGYVALTRASENVIITFSKKRRFNDAWIDSAGPSRFLLEMPTEYVE 2610
++ VL I WK++G+T + + E + +Y +YQQ L DF DL L +F + P+ L RY+ +FR++LVDEYQDT+ AQ L+AL + H+ ++ C GD+DQ +YGWRG V+++ L FE+DFPGA L + +R H+L +A+GL+ L + + T + G VR G W+ EE + + E + R +G KD+A++ R + TRE EE G+ Y V GG F+ R E++ LA L L P D AF R ++L + +T++ + ELA A VS E R V+ LK +F+ + RW L Q LH AE V + W+A D S AP R E++ +L A D + FL + E + D L +MT+H AKG EF VVFL GW+EG FP P S + E+ ++ LE EERRL YV LTRA II + RR ++ W +A PSRFL E+P ++E
Sbjct: 151 SRVVLGIIERWKDRGLTPD--KVSRAEMAEVASGRILDLYHAYQQRLLTLNACDFGDLLLHNLTIFQKAPDQLARYQSQFRYILVDEYQDTNVAQYLWLRALA---------------------------------------------QQHK----NICCVGDDDQSVYGWRGAEVENI-----LKFEKDFPGATIIRLEQNYRSTPHILAAASGLIAHNE--GRLGKTLWTDVNE-GEKVRVLGAWDGAEEARQIGDEVETLQR-RGTELKDIAILVRAGFQTREFEERFITLGISYRVIGGPRFYERQEIRDALAYLRLIHQPDDGLAFERIVNLPRRG-----IGDTTLKQLNELARAQSVSVPEVARQVVTTDELKPAARRALGSFMNDVARWRGLA---QTLHHAELTQIVLDESGYTAMWQA-------DKSIEAPGRL-------ENLKELVRALEDFDSLEGFLEHVSLVMENAES-------------------------------GPRDQLSIMTLHGAKGLEFDVVFLPGWEEGLFPH-PRSLD-ENGIKGLE---EERRLAYVGLTRARRLAIICHAGSRRIHNQW-QNALPSRFLAELPAAHIE 648
BLAST of mRNA_Ecto-sp9_F_contig924.17409.1 vs.
Match: DNA (helicase n=11 Tax=Alphaproteobacteria TaxID=28211 RepID=J9E2B2_9PROT) HSP 1 Score: 226 bits (576), Expect = 8.370e-58 Identity = 185/638 (29.00%), Postives = 275/638 (43.10%), Query Frame = 1
Query: 787 AKTVLSRIGVWKEQGITVEEHRSRNMEADDYTDAAAAAVYPSYQQHLRRRRQVDFADLCLMATELFTRHPEVLERYRWRFRHVLVDEYQDTSPAQQRLLKALVSGVPSKRRAASATPASISPDPAVAIGEGGDGECFDAAGTGKSEGLEHHQGLGVSLFCAGDEDQHIYGWRGTTVDHLHRHVCLLFEEDFPGAVRCALTETHRLPVHVLRSATGLMRAGGLVPLLNRRMRT--KQHTPGAVVRAQGLWNSREEGKWVALEASKMNREQGISYKDMAVIARTAYNTRELEEALAARGVPYTVEGGSSFFSRGEVQAPLALLALCANPQDDEAFRRFISLRSKTRLLDWATPSTMRGVGELAVADGVSYAEGVRLSVSRGLLKGEDS---SNFIYSLRRWASLLMGWQRLHEAERGAAVWRIFWEAGFLPRPVDASFAPHREGGGGPDEESIGKLATAASRCDHIGRFLLRAARAREETANKKAARKGGEGRGRGGRWEGTTGKKDKQSTTPSSEDALEMMTMHQAKGREFKVVFLTGWDEGSFPLLPN-SGNGEHAVESLERVQEERRLGYVALTRASENVIITFSKKRRFNDAWIDSAGPSRFLLEMPTEYVEVSPDAIGRTLNDYPGFAGTHRLAF 2682
A+ + + WK +G + H+ EA + D AA +Y SYQ L+ VDF DL L LF + E+L+ Y+ RFRH+LVDEYQDT+ Q L+ L +HH ++ C GD+DQ IYGWRG VD++ R FE+DFPGA L +R H+L +A GL+ A NR +T Q G VR +G W+ EE + A + + R+ G + ++A++ R ++ RE E+ G+PY V GG F+ R E++ A L L A P DD AF R + + + L D A ++ + A + +S R+ + LK + F+ S+ RW + + E+G+ +D +P G E++ +L + +L + + N SE+ + +MT+H AKG EF VFL GW+EG FP + G+ +E EERRL YV +TRA EN+ I+F+ RR + W +A PSRF+ E+P E+VE G N P F + R F
Sbjct: 212 ARQLAFLVDRWKNRGW--QPHQVPAGEAGSFADGAAGKLYESYQNRLKILNAVDFGDLLLECLRLFQENNEILQEYQDRFRHMLVDEYQDTNAVQYLWLRLLAQ--------------------------------------------KHH-----NICCVGDDDQSIYGWRGAEVDNILR-----FEKDFPGAGIIRLERNYRSTPHILGAAAGLIEANK-----NRLGKTLWTQENGGEKVRLRGSWDGEEEARVTADDIESLQRK-GHNLNEVAILVRASFQMREFEDRFMQLGLPYRVIGGPRFYERAEIRDANAYLRLIAQPDDDLAFERICN-KPRRGLGDVA----LQNIHSTARRNSISLMRAARILIDSDELKPAARRALTGFVASIDRWRD------KKDSLPHNELAQVVLDESGYTQMWMDDK-SPEAPG----KLENLKELIRFMEDFGSLNAYLEHISLIMDAETN-------------------------------DSEEKVSLMTLHAAKGLEFLTVFLPGWEEGLFPHQRSLDETGDRGLE------EERRLAYVGITRAKENITISFAGNRRIHGQW-QAAIPSRFIDELPEEHVEPLESETG--YNQTPKFQDSSRSQF 731
BLAST of mRNA_Ecto-sp9_F_contig924.17409.1 vs.
Match: DNA (helicase n=4 Tax=Bacteria TaxID=2 RepID=A0A7V6U299_9HYPH) HSP 1 Score: 226 bits (577), Expect = 1.020e-57 Identity = 191/640 (29.84%), Postives = 288/640 (45.00%), Query Frame = 1
Query: 787 AKTVLSRIGVWKEQGITVEEHRSRNMEADDYTDAAAAAVYPSYQQHLRRRRQVDFADLCLMATELFTRHPEVLERYRWRFRHVLVDEYQDTSPAQQRLLKALVSGVPSKRRAASATPASISPDPAVAIGEGGDGECFDAAGTGKSEGLEHHQGLGVSLFCAGDEDQHIYGWRGTTVDHLHRHVCLLFEEDFPGAVRCALTETHRLPVHVLRSATGLMRAGGLVPLLNRRMRTKQHTPGAV-VRAQGLWNSREEGKWVALEASKMNREQGISYKDMAVIARTAYNTRELEEALAARGVPYTVEGGSSFFSRGEVQAPLALLALCANPQDDEAFRRFISLRSKTRLLDWATPSTMRGVGELAVADGVSYAEGVRLSVSRG---LLKGEDSS--------NFIYSLRRWASLLMGWQRLHEAERGAAVWRIFWEAGFLP--RPVDASFAPHREGGGGPDEESIGKLATAASRCDHIGRFLLRAARAREETANKKAARKGGEGRGRGGRWEGTTGKKDKQSTTPSSEDALEMMTMHQAKGREFKVVFLTGWDEGSFPLLPNSGNGEHAVESLERVQEERRLGYVALTRASENVIITFSKKRRFNDAWIDSAGPSRFLLEMPTEYVEVSPDAIGRTLNDYPGFAG 2664
A+T + I WK +G + +A + + +Y +YQ+ LR DF DL L +F HP++L Y +FR++LVDEYQDT+ AQ L+ L++ P R + T + +P EG G AG G+ ++ V+L C GD+DQ IYGWRG VD++ R FE+DFPGAV L +R H+L +A L+ L + + T+ P V+ W+S EE + V EA + + QG +MA++ R ++ RE E+ G+ Y V GG F+ R E++ +A L + A P DD A R I+ TP RG+GE A+ YA +S+ L++ E+ + + RW S++ AE I E+G+ + ++ AP R E++ +L + + + FL A + N+ DA+ +MT+H AKG EF+ VFL GW+EG FP G + ++EERRL YV +TRA +N+ I F RR + W S PSRFL E+P +VEV+ +Y G+ G
Sbjct: 178 ARTFANMIDGWKNKGFGPSD--IPEGDARSFGNGRGRELYQAYQERLRTLNACDFGDLLLHPIRIFRNHPDILREYHAKFRYILVDEYQDTNTAQYLWLR-LLAQRPQSRNTSPTTQNTNAPIQPARASEGPRG-----AGERSELGVSENK---VNLCCVGDDDQSIYGWRGAEVDNILR-----FEKDFPGAVVIKLERNYRSTAHILGAAAHLIAHNE--GRLGKTLFTEAPNPDDPRVKVHAAWDSEEEARAVG-EAIEQAQRQGHLLNNMAILVRASFQMREFEDRFVTLGLNYRVIGGPRFYERLEIRDAMAYLRVVAQPADDLALERIIN-----------TPK--RGLGEAAIRQVHDYARARDISMFAAACDLIETEELKPKPRSALREVVENFLRWQSMIDNTPHTELAET------ILDESGYTAMWQNDKSAEAPGRL-------ENLKELIRSMEEYESLRGFLEHVALVMDAEQNEDL-------------------------------DAVNIMTLHSAKGLEFETVFLPGWEEGLFPHQRALDEGGRSG-----LEEERRLAYVGVTRAKKNLHIWFVSNRRIHGMW-QSTIPSRFLEELPEAHVEVA-----ELEGNYGGYGG 730 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig924.17409.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig924.17409.1 >prot_Ecto-sp9_F_contig924.17409.1 ID=prot_Ecto-sp9_F_contig924.17409.1|Name=mRNA_Ecto-sp9_F_contig924.17409.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=1077bp MIGHAEQVDLVARILGDSGRGGWDSRDDLAASSYKGDAAFEGPWSATGGGback to top mRNA from alignment at Ecto-sp9_F_contig924:15547..28579- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig924.17409.1 ID=mRNA_Ecto-sp9_F_contig924.17409.1|Name=mRNA_Ecto-sp9_F_contig924.17409.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=13033bp|location=Sequence derived from alignment at Ecto-sp9_F_contig924:15547..28579- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig924:15547..28579- >mRNA_Ecto-sp9_F_contig924.17409.1 ID=mRNA_Ecto-sp9_F_contig924.17409.1|Name=mRNA_Ecto-sp9_F_contig924.17409.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=6462bp|location=Sequence derived from alignment at Ecto-sp9_F_contig924:15547..28579- (Ectocarpus species9 EcSCA_722f female)back to top |