mRNA_Ecto-sp9_F_contig924.17408.1 (mRNA) Ectocarpus species9 EcSCA_722f female
|
Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig924.17408.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMX6_ECTSI) HSP 1 Score: 178 bits (452), Expect = 1.120e-43 Identity = 111/113 (98.23%), Postives = 112/113 (99.12%), Query Frame = 2
Query: 1742 EMLAGQAKTNGDMAPVPMADVVXXXXXXXXXXXXXXXXXXXXXVELLRRDRRLNVGTEGVRYYHPGARGPKHLTLTLEHLEWFATAFDRCDDSILRRRALGLVDAIRVESEHK 2080
EMLAGQAKT+GDMAPVPMADVVXXXXXXXXXXXXXXXXXXXX VELLRRDRRLNVGTEGVRYYHPGARGPKHLTLTLEHLEWFATAFDRCDDSILRRRALGLVDAIRVESEHK
Sbjct: 452 EMLAGQAKTDGDMAPVPMADVVXXXXXXXXXXXXXXXXXXXXLVELLRRDRRLNVGTEGVRYYHPGARGPKHLTLTLEHLEWFATAFDRCDDSILRRRALGLVDAIRVESEHK 564 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig924.17408.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig924.17408.1 >prot_Ecto-sp9_F_contig924.17408.1 ID=prot_Ecto-sp9_F_contig924.17408.1|Name=mRNA_Ecto-sp9_F_contig924.17408.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=647bp MVRAQIASTRVAPPAAARCTSWTAPSRLARDSNRMLPPPSPRLKRNARCRback to top mRNA from alignment at Ecto-sp9_F_contig924:8186..15341+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig924.17408.1 ID=mRNA_Ecto-sp9_F_contig924.17408.1|Name=mRNA_Ecto-sp9_F_contig924.17408.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=7156bp|location=Sequence derived from alignment at Ecto-sp9_F_contig924:8186..15341+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig924:8186..15341+ >mRNA_Ecto-sp9_F_contig924.17408.1 ID=mRNA_Ecto-sp9_F_contig924.17408.1|Name=mRNA_Ecto-sp9_F_contig924.17408.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=3882bp|location=Sequence derived from alignment at Ecto-sp9_F_contig924:8186..15341+ (Ectocarpus species9 EcSCA_722f female)back to top |