mRNA_Ecto-sp9_F_contig9237.17405.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig9237.17405.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8D6_9PHAE) HSP 1 Score: 302 bits (773), Expect = 1.310e-91 Identity = 158/185 (85.41%), Postives = 158/185 (85.41%), Query Frame = 1
Query: 4 VAVKEFVFAQAAISGGSLQRNELIEEIVGEAAIMSVLQHPRILHLYGCSLTSQAIWIVSELCPRGSLRQVLDDRGTPLTPRARLRVAVDVAEGMLYLHSREEPVIHRDLKSHNIFMMEDRDFALHTHTLLPLSLPRTCCDLSTYCSGQLQPKIGDWGSARALALYTGVRSMTHGVGTTCWLAPEV 558
VAVKEFVFAQAAISGGS QRNELIEEIVGEAAIMSVLQHPRILHLYGCSLTSQAIWIVSELCPRGSLRQVLDDRGT LTPRARLRVAVDVAEGMLYLHSREEPVIHRDLKSHNIFMMEDRD GQLQPKIGDWGSARALALYTGVRSMTHGVGTTCWLAPEV
Sbjct: 1094 VAVKEFVFAQAAISGGSFQRNELIEEIVGEAAIMSVLQHPRILHLYGCSLTSQAIWIVSELCPRGSLRQVLDDRGTSLTPRARLRVAVDVAEGMLYLHSREEPVIHRDLKSHNIFMMEDRD-------------------------GQLQPKIGDWGSARALALYTGVRSMTHGVGTTCWLAPEV 1253
BLAST of mRNA_Ecto-sp9_F_contig9237.17405.1 vs.
Match: Kinase-like (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8B5_9STRA) HSP 1 Score: 249 bits (636), Expect = 2.760e-80 Identity = 128/186 (68.82%), Postives = 146/186 (78.49%), Query Frame = 1
Query: 4 VAVKEFVFAQAAISGGSLQRNELIEEIVGEAAIMSVLQHPRILHLYGCSLTSQAIWIVSELCPRGSLRQVLDDRGTPLTPRARLRVAVDVAEGMLYLHSREEPVIHRDLKSHNIFMMEDRDFALHTHTLLPLSLPRTCCDLSTYCSGQLQPKIGDWGSARALALYTG-VRSMTHGVGTTCWLAPEV 558
VAVKEFVFAQAA++GGSLQR ELIEEIVGEAA+MS L+HPRILHLYGCSLT+ AIWIVSELC RGSLRQVLDDR LTP RLR+AVDVAEGMLYLH+R++P+IHRDLKSHN+F+ E +G+L PKIGDWGSARA+AL+TG +R+MTHGVGT CWLAPEV
Sbjct: 44 VAVKEFVFAQAAVAGGSLQRTELIEEIVGEAALMSFLRHPRILHLYGCSLTANAIWIVSELCSRGSLRQVLDDRSQQLTPVQRLRIAVDVAEGMLYLHTRDQPIIHRDLKSHNVFIQET-------------------------ATGELLPKIGDWGSARAVALHTGGMRTMTHGVGTACWLAPEV 204
BLAST of mRNA_Ecto-sp9_F_contig9237.17405.1 vs.
Match: Kinase-like (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLH3_9STRA) HSP 1 Score: 250 bits (639), Expect = 2.870e-79 Identity = 130/187 (69.52%), Postives = 146/187 (78.07%), Query Frame = 1
Query: 1 QVAVKEFVFAQAAISGGSLQRNELIEEIVGEAAIMSVLQHPRILHLYGCSLTSQAIWIVSELCPRGSLRQVLDDRGTPLTPRARLRVAVDVAEGMLYLHSREEPVIHRDLKSHNIFMMEDRDFALHTHTLLPLSLPRTCCDLSTYCSGQLQPKIGDWGSARALALYTG-VRSMTHGVGTTCWLAPEV 558
QVAVKEFVFAQAA++GGSLQRNELIEEIVGEAA+MS L+HPRILHLYGCSLTSQAIWIVSELC RGSLRQVLDDR L RLR+AVD+AEGMLYLHSRE+P+IHRDLKSHN+F+ E +G+L PKIGDWGSARA+ L+TG +R+MTHGVGT CWLAPEV
Sbjct: 43 QVAVKEFVFAQAAVTGGSLQRNELIEEIVGEAAVMSFLRHPRILHLYGCSLTSQAIWIVSELCSRGSLRQVLDDRSQHLPLVMRLRIAVDIAEGMLYLHSREQPIIHRDLKSHNVFIQET-------------------------ATGELLPKIGDWGSARAVMLHTGGMRTMTHGVGTACWLAPEV 204
BLAST of mRNA_Ecto-sp9_F_contig9237.17405.1 vs.
Match: Hypothetical (protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPL6_HETAK) HSP 1 Score: 228 bits (582), Expect = 8.590e-71 Identity = 116/186 (62.37%), Postives = 142/186 (76.34%), Query Frame = 1
Query: 1 QVAVKEFVFAQAAISGGSLQRNELIEEIVGEAAIMSVLQHPRILHLYGCSLTSQAIWIVSELCPRGSLRQVLDDRGTPLTPRARLRVAVDVAEGMLYLHSREEPVIHRDLKSHNIFMMEDRDFALHTHTLLPLSLPRTCCDLSTYCSGQLQPKIGDWGSARALALYTGVRSMTHGVGTTCWLAPEV 558
+VAVKEFVFAQ A+ GG+LQRNEL++EIVGEAAIMS L+HP++LHLYGCS+TSQ++WIVSELC RGSLRQVL+DR T L+ R RL++A+DVAEGMLYLH+ E P++HRDLKSHNIF+ E +L+ KIGDWGSARA+AL +G R+MTHGVGT CW+APEV
Sbjct: 142 KVAVKEFVFAQEALRGGALQRNELVQEIVGEAAIMSFLRHPKVLHLYGCSITSQSLWIVSELCSRGSLRQVLNDRRTRLSTRRRLQLAIDVAEGMLYLHNHEAPIVHRDLKSHNIFIHEKSPH-------------------------ELEAKIGDWGSARAVAL-SGQRTMTHGVGTACWIAPEV 301
BLAST of mRNA_Ecto-sp9_F_contig9237.17405.1 vs.
Match: Protein (kinase domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIL7_AURAN) HSP 1 Score: 210 bits (535), Expect = 3.670e-65 Identity = 108/187 (57.75%), Postives = 133/187 (71.12%), Query Frame = 1
Query: 1 QVAVKEFVFAQAAISGGSLQRNELIEEIVGEAAIMSVLQHPRILHLYGCSLTSQAIWIVSELCPRGSLRQVLDDRGTPLTPRARLRVAVDVAEGMLYLHSREEPVIHRDLKSHNIFMMEDRDFALHTHTLLPLSLPRTCCDLSTYCSGQLQPKIGDWGSARALALYTGV-RSMTHGVGTTCWLAPEV 558
+VAVKEFV AQAA +GG++ R ++IEEIVGEA IM+ L+HP+IL LYGCSLT+QAIWIVSELC GSLR VLDD L RLR+A+DVAEGMLYLH+R+ P++HRDLKSHN+F+ E R G++ +IGDWGSARA+A+ R+MTHGVGTTCWLAPE+
Sbjct: 25 EVAVKEFVLAQAAFAGGAMHRRDIIEEIVGEAGIMAYLRHPKILQLYGCSLTAQAIWIVSELCSHGSLRSVLDDASLELGLETRLRMAIDVAEGMLYLHTRDHPIVHRDLKSHNLFVAEVR--------------------------GRMHVRIGDWGSARAVAMSPDFSRTMTHGVGTTCWLAPEL 185
BLAST of mRNA_Ecto-sp9_F_contig9237.17405.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RPC6_9STRA) HSP 1 Score: 217 bits (553), Expect = 7.030e-65 Identity = 115/192 (59.90%), Postives = 137/192 (71.35%), Query Frame = 1
Query: 1 QVAVKEFVFAQAAISGGSLQRNELIEEIVGEAAIMSVLQHPRILHLYGCSLTSQAIWIVSELCPRGSLRQVLDDRGTPLTPRARLRVAVDVAEGMLYLHSREEPVIHRDLKSHNIFMMEDRDFALHTHTLLPLSLPRTCCDLSTYCSGQLQPKIGDWGSARALAL--YTGVRSMTHGVGTTCWLAPEVGEEG 570
QVAVKEFVFAQAA+SGGSL R ++IEEIVGEA IMS L+HPRIL L+GCSLT+QAIW+VSELC GSLRQVLDD+ L R+++A+DVAEGMLYLHSR+ P+IHRD+KSHN+F+ E SG+ KIGDWGSARA+AL ++MTHGVGT CWLAPEV + G
Sbjct: 240 QVAVKEFVFAQAAVSGGSLHRRDIIEEIVGEAGIMSYLRHPRILQLFGCSLTAQAIWLVSELCSLGSLRQVLDDKHRELPISTRIQMAIDVAEGMLYLHSRDPPIIHRDIKSHNLFVQESP-------------------------SGEYCVKIGDWGSARAVALAGQQNPKTMTHGVGTVCWLAPEVIKHG 406
BLAST of mRNA_Ecto-sp9_F_contig9237.17405.1 vs.
Match: Hypothetical (protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X365_9STRA) HSP 1 Score: 212 bits (539), Expect = 1.070e-60 Identity = 109/188 (57.98%), Postives = 135/188 (71.81%), Query Frame = 1
Query: 1 QVAVKEFVFAQAAISGGSLQRNELIEEIVGEAAIMSVLQHPRILHLYGCSLTSQAIWIVSELCPRGSLRQVLDDRGTPLTPRARLRVAVDVAEGMLYLHSREEPVIHRDLKSHNIFMMEDRDFALHTHTLLPLSLPRTCCDLSTYCSGQLQPKIGDWGSARALALYTG--VRSMTHGVGTTCWLAPEV 558
+VAVKEFV AQAA +GGSLQR +++E IVGEA IM+ L+HP++L LYGC+LT+QAIWIVSELC GSLRQVLDD L+ RLR+A+DVAEGML+LH+RE P++HRDLKSHN+F+ + R G+L+ +IGDWGSARA+A RSMTHGVGTTCWLAPE+
Sbjct: 575 EVAVKEFVLAQAAFAGGSLQRRDIVEAIVGEAGIMAYLRHPKVLQLYGCALTAQAIWIVSELCAHGSLRQVLDDDKVELSVETRLRMAIDVAEGMLFLHTRERPIVHRDLKSHNLFVADVR--------------------------GRLRVRIGDWGSARAVAATPEGFARSMTHGVGTTCWLAPEL 736
BLAST of mRNA_Ecto-sp9_F_contig9237.17405.1 vs.
Match: Protein (kinase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SUV6_9ARCH) HSP 1 Score: 208 bits (529), Expect = 3.340e-59 Identity = 110/185 (59.46%), Postives = 129/185 (69.73%), Query Frame = 1
Query: 4 VAVKEFVFAQAAISGGSLQRNELIEEIVGEAAIMSVLQHPRILHLYGCSLTSQAIWIVSELCPRGSLRQVLDDRGTPLTPRARLRVAVDVAEGMLYLHSREEPVIHRDLKSHNIFMMEDRDFALHTHTLLPLSLPRTCCDLSTYCSGQLQPKIGDWGSARALALYTGVRSMTHGVGTTCWLAPEV 558
VAVKEFVFAQAAI+GGSLQRN +IEEIVGEA +M+ L+HP+IL LYGCSLT QAIWIVSELC RGSL+ VL D+ L RL + +D+A+GM YLH+R P+IHRDLKSHNIF+ E G KIGDWGSARA+AL TG ++MTHGVGT CWL+PEV
Sbjct: 435 VAVKEFVFAQAAIAGGSLQRNNIIEEIVGEAGVMACLRHPKILQLYGCSLTMQAIWIVSELCIRGSLKMVLMDQALDLPIVKRLSICMDIADGMQYLHNRSPPIIHRDLKSHNIFISEPSP-------------------------GHFVAKIGDWGSARAVAL-TGAKNMTHGVGTACWLSPEV 593
BLAST of mRNA_Ecto-sp9_F_contig9237.17405.1 vs.
Match: Protein (kinase domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CC40_THAPS) HSP 1 Score: 194 bits (494), Expect = 7.750e-59 Identity = 101/185 (54.59%), Postives = 126/185 (68.11%), Query Frame = 1
Query: 4 VAVKEFVFAQAAISGGSLQRNELIEEIVGEAAIMSVLQHPRILHLYGCSLTSQAIWIVSELCPRGSLRQVLDDRGTPLTPRARLRVAVDVAEGMLYLHSREEPVIHRDLKSHNIFMMEDRDFALHTHTLLPLSLPRTCCDLSTYCSGQLQPKIGDWGSARALALYTGVRSMTHGVGTTCWLAPEV 558
VAVKEFVFAQAA++G S Q+ ++EEI+GEA +M++L+HP +L L+GCSLT+QAIWIVSELC GSLRQ+LDDR L+ RL +A+ VAEGM YLH+++ P+IHRDLKSHNIF+ E + KIGDWGSARA G R+MTHGVGT CW+APEV
Sbjct: 31 VAVKEFVFAQAAVAGKSRQQQAIVEEIIGEAGMMAILRHPNVLQLFGCSLTAQAIWIVSELCSLGSLRQLLDDRERKLSMDVRLNLALQVAEGMAYLHTQDPPIIHRDLKSHNIFVHET-----------------------------MSAKIGDWGSARATL--AGSRTMTHGVGTACWMAPEV 184
BLAST of mRNA_Ecto-sp9_F_contig9237.17405.1 vs.
Match: Kinase-like (protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ETP9_9STRA) HSP 1 Score: 196 bits (497), Expect = 4.430e-58 Identity = 109/199 (54.77%), Postives = 134/199 (67.34%), Query Frame = 1
Query: 4 VAVKEFVFAQAAISGGSLQRNELIEEIVGEAAIMSVLQHPRILHLYGCSLTSQAIWIVSELCPRGSLRQVLDDRGTPLTPRARLRVAVDVAEGMLYLHSREEPVIHRDLKSHNIFMMED-------RDFAL-------HTHTLLPLSLPRTCCDLSTYCSGQLQPKIGDWGSARALALYTGVRSMTHGVGTTCWLAPEV 558
VAVKEFVFAQAA+ G S + +++EEI+GEA +M++L+HP +L L+GCSLT+QAIWIVSELC GSLRQ+LDDR PL RL +A+ VAEGM YLH++ +IHRDLKSHNIF+ E D + HT+ L P+ ST L KIGDWGSARA +G R+MTHGVGT CWLAPEV
Sbjct: 44 VAVKEFVFAQAAVIGRSSMQQQIVEEIIGEAGMMAILRHPNVLQLFGCSLTAQAIWIVSELCSLGSLRQILDDRDRPLPDDIRLNLALQVAEGMTYLHNQNPSIIHRDLKSHNIFVHETFIDTEQPDDSNINGPSGDGHTNQLTRWLRPQKMKSHST-----LIAKIGDWGSARATL--SGSRTMTHGVGTACWLAPEV 235 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9237.17405.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig9237.17405.1 >prot_Ecto-sp9_F_contig9237.17405.1 ID=prot_Ecto-sp9_F_contig9237.17405.1|Name=mRNA_Ecto-sp9_F_contig9237.17405.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=191bp QVAVKEFVFAQAAISGGSLQRNELIEEIVGEAAIMSVLQHPRILHLYGCSback to top mRNA from alignment at Ecto-sp9_F_contig9237:2264..4068- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig9237.17405.1 ID=mRNA_Ecto-sp9_F_contig9237.17405.1|Name=mRNA_Ecto-sp9_F_contig9237.17405.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=1805bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9237:2264..4068- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig9237:2264..4068- >mRNA_Ecto-sp9_F_contig9237.17405.1 ID=mRNA_Ecto-sp9_F_contig9237.17405.1|Name=mRNA_Ecto-sp9_F_contig9237.17405.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1146bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9237:2264..4068- (Ectocarpus species9 EcSCA_722f female)back to top |