mRNA_Ecto-sp9_F_contig8938.17123.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig8938.17123.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDE3_ECTSI) HSP 1 Score: 786 bits (2031), Expect = 7.290e-279 Identity = 383/407 (94.10%), Postives = 392/407 (96.31%), Query Frame = 1
Query: 1 SMYGEDGFRTIQAFSTDAEEKLGGEKWFEVYQNYWGAPDYADRFTSAACTGTGSYETVEPVVRAEACTKGAQYQNVWMYVIHEMENAVGACNRGDYGAADGGPHHWDEAWAFYAGSLEGESGNADGDGKMLYALAQKRCGNFGTCGGADGITGTAAINDDVLELIGAGSGYLLEGECAEAEEVKEKIVQLMTVPLLQATLRYLYRADPASDYDGDAKHWAELWAFAAAILPLINECSADVAHTVRSNSDIDSEDAPVSAGFVAVKEELESIYSCLGMTCDQVGGLLAGDSTTDYVPGLEPCGGEEEPTDPTEETTPSSYDPIAGWTPVSDVVEHSKLDLDTLAMETNADLQTDEGFTAAYEAYSLGGNSMYGEDGFRTIQAFSTDAEEKLGGEKWFEVYQNYWGAPD 1221
SMY EDGFRTIQAF TDAEEKLGGEKWFEVYQ YWGAPDYADRFTSAACTGTGSYETVEPVVRAEACTKGAQYQNVWMYVIHEMENAVGACNRGD GAADGGPH+WDEAWAFYAGSLEGESGNADGDGKMLYALAQKRCGNFGTCGGADGITGTAAINDD+LELIGAGSGYLLEG+CAEAEE KE IVQLMTVPL+QATLRYLYRADPASDYDGDAKHWAELWAFAAAILPLI+ECSADVAHTVRSNSDIDSE APVSAGFVAVKEELESIYSCLGMTCDQVGGLLAGDSTTDYVPGLEPCGGEEEPTD SS+DPIAGWTPVSDVVEHSK+DLDTLAMETNADLQT+EGFTAAYEAYSLGGNSMYGE+GFRTIQAFSTDAEEKLGGEKWFEVYQ YWGAPD
Sbjct: 76 SMYSEDGFRTIQAFWTDAEEKLGGEKWFEVYQAYWGAPDYADRFTSAACTGTGSYETVEPVVRAEACTKGAQYQNVWMYVIHEMENAVGACNRGDNGAADGGPHYWDEAWAFYAGSLEGESGNADGDGKMLYALAQKRCGNFGTCGGADGITGTAAINDDILELIGAGSGYLLEGKCAEAEEAKESIVQLMTVPLVQATLRYLYRADPASDYDGDAKHWAELWAFAAAILPLIDECSADVAHTVRSNSDIDSEHAPVSAGFVAVKEELESIYSCLGMTCDQVGGLLAGDSTTDYVPGLEPCGGEEEPTD-------SSFDPIAGWTPVSDVVEHSKIDLDTLAMETNADLQTEEGFTAAYEAYSLGGNSMYGEEGFRTIQAFSTDAEEKLGGEKWFEVYQAYWGAPD 475
BLAST of mRNA_Ecto-sp9_F_contig8938.17123.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ42_ECTSI) HSP 1 Score: 433 bits (1113), Expect = 1.060e-135 Identity = 226/405 (55.80%), Postives = 278/405 (68.64%), Query Frame = 1
Query: 16 DGFRTIQAFSTDAEEKLGGEKWFEVYQNYWGAPDYADRFTSAACTGTGSYETVEPVVRAEACTKGAQYQNVWMYVIHEMENAVGACNRGDYGAADGGPHHWDEAWAFYAGSLEGESGNADGDGKMLYALAQKRCGNFGTC-GGADG--ITGTAAINDDVLELIGAGSGYLLEGECAEAEEVKEKIVQLMTVPLLQATLRYLYRADPASDYDGDAKHWAELWAFAAAILPLINECSADVAHTVRSNSDIDSEDAPVSAGFVAVKEELESIYSCLGMTCDQVGGLLAGDSTTDYVPGLEPCGGEEEPTDPTEETTPSSYDPIAGWTPVSDVVEHSKLDLDTLAMETNADLQTDEGFTAAYEAYSLGGNSMYGEDGFRTIQAFSTDAEEKLGGEKWFEVYQNYWGAPD 1221
D RT+Q STDA+EKL GE F+V++ YWG+PDYAD++TSAAC GTG++E E V R+E C KGAQYQNVWMYV HE+ +AVG C GD A DGGPH WDE WAFY GSLEG + GDG+MLYALA+KRC NFGTC G +DG TG +AIN ++L L G LL +C +A V ++IV LM VPL+Q LRY Y ADPA GD K AELWAF+A+ILP I+ C A V TVR N+++ S AP++ G+ A+K +LE++YSC+G+TC QVGGLL D T Y EPC TD T +Y IAG+TP SDVVEHS+LDLD ME DL+++ G TAAY AYS GGNS D RT+Q STDA+ KL GE F+V++ YWG+PD
Sbjct: 455 DSTRTLQGLSTDAQEKLTGEATFDVWEAYWGSPDYADQYTSAACQGTGTFEGAEMVTRSECCLKGAQYQNVWMYVTHELYDAVGDCENGDLSANDGGPHAWDEGWAFYTGSLEGTAVGGTGDGQMLYALAEKRCENFGTCTGDSDGSDTTGVSAINSELLGLWEDGKANLLAEQCTQASAVIDQIVPLMAVPLIQGLLRYTYLADPAIGTGGD-KEAAELWAFSASILPWISACDAAVGTTVRDNTELGSASAPMADGYAAIKTQLETVYSCMGITCAQVGGLL--DDTGAYYTDFEPCDDSTSTTDSATSAT-GTYADIAGYTPGSDVVEHSELDLDVADMEAGTDLESEAGLTAAYTAYSEGGNSEK-TDSTRTLQGLSTDADGKLTGEATFDVWEAYWGSPD 854
BLAST of mRNA_Ecto-sp9_F_contig8938.17123.1 vs.
Match: Probable (high CO2 inducible periplasmic protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFX4_ECTSI) HSP 1 Score: 370 bits (949), Expect = 3.720e-122 Identity = 182/300 (60.67%), Postives = 219/300 (73.00%), Query Frame = 1
Query: 16 DGFRTIQAFSTDAEEKLGGEKWFEVYQNYWGAPDYADRFTSAACTGTGSYETVEPVVRAEACTKGAQYQNVWMYVIHEMENAVGACNRGDYGAADGGPHHWDEAWAFYAGSLEGESGNADGDGKMLYALAQKRCGNFGTCGGADG---ITGTAAINDDVLELIGAGSGYLLEGECAEAEEVKEKIVQLMTVPLLQATLRYLYRADPASDYDGDAKHWAELWAFAAAILPLINECSADVAHTVRSNSDIDSEDAPVSAGFVAVKEELESIYSCLGMTCDQVGGLLAGDSTTDYVPGLEPCG 906
D RTIQ FST A+EKL GEKWF+VY+ YWG+ DYAD+FTS AC GT ++ RAE C KGAQYQNVWMYVIHE+E+A+ C+ G+ A DGGPH WDE W FYAGSLEG G GDG MLYALA+KRC NF TC D ITGTA +N D+LEL G YLL+G+C A +VK+KI+ LM VPL+Q LRY Y ADP + DG K AELWAF+AA+LP INEC +VA VR+N+DI S DAP+S G+V +KE+LES+YSC+G++C QVGGL+ G+STT Y G EPCG
Sbjct: 80 DSIRTIQGFSTGAQEKLSGEKWFDVYEAYWGSTDYADQFTSGACNGTEQFDDASVETRAEGCVKGAQYQNVWMYVIHELEDAIEDCDIGNLNANDGGPHAWDEGWGFYAGSLEGTEGT--GDGVMLYALAEKRCENFATCTADDDGSDITGTAQVNSDMLELYKEGQVYLLDGDCGAAGDVKDKIIDLMGVPLVQGMLRYFYNADPEAG-DGGDKAAAELWAFSAAMLPRINECDEEVATLVRANTDIASADAPMSEGYVFLKEQLESVYSCMGISCSQVGGLVIGESTT-YYDGFEPCG 375
BLAST of mRNA_Ecto-sp9_F_contig8938.17123.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYS6_9PHAE) HSP 1 Score: 331 bits (849), Expect = 7.670e-105 Identity = 169/305 (55.41%), Postives = 208/305 (68.20%), Query Frame = 1
Query: 25 RTIQAFSTDAEEKLGGEKWFEVYQNYWGAPDYADRFTSAACTGTGSYETVEPVVRAEACTKGAQYQNVWMYVIHEMENAVGACN---------RGDYGAADGGPHHWDEAWAFYAGSLEGESGNADGDGKMLYALAQKRCGNFGTC-GGADG--ITGTAAINDDVLELIGAGSGYLLEGECAEAEEVKEKIVQLMTVPLLQATLRYLYRADPASDYDGDAKHWAELWAFAAAILPLINECSADVAHTVRSNSDIDSEDAPVSAGFVAVKEELESIYSCLGMTCDQVGGLLAGDSTTDYVPGLEPC 903
RT+Q FST A+EKL GE F+V++ YWG+PDYAD+FTSAAC GTG++E E V R+E C KGAQYQNVWMYV HE+ +AV C GD A DGGPH WDE WAFY GSLEG + GDG+MLYALA+KRC NFGTC G +DG TG +AIN ++L+L G LL G+C +A V ++I+ LM VPL+Q LRY Y ADPA GD K AELWAF+AAILP I+ C V VR N+++ AP++ G+ A+K +LES+YSC+G+TC QVGGLL D T Y EPC
Sbjct: 247 RTVQGFSTGADEKLTGEATFDVWEAYWGSPDYADQFTSAACQGTGAFEGAEMVTRSECCLKGAQYQNVWMYVTHELYDAVEDCEIGGGCVKVAEGDLSANDGGPHAWDEGWAFYTGSLEGTAVGGSGDGQMLYALAEKRCENFGTCTGDSDGSDATGVSAINSELLDLWEDGKANLLAGQCTQASAVIDEILPLMAVPLIQGLLRYTYLADPAIGTGGD-KEAAELWAFSAAILPWISACDPAVGTAVRDNTELGGASAPMADGYAAIKGQLESVYSCMGITCAQVGGLL--DDTGAYYTNFEPC 548
BLAST of mRNA_Ecto-sp9_F_contig8938.17123.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TU13_9STRA) HSP 1 Score: 320 bits (819), Expect = 6.630e-103 Identity = 178/394 (45.18%), Postives = 234/394 (59.39%), Query Frame = 1
Query: 52 AEEKLGGEKWFEVYQNYWGAPDYADRFTSAACTGTGSYETVEPVVRAEACTKGAQYQNVWMYVIHEMENAVGACNRGDYGAADGGPHHWDEAWAFYAGSLEGESGNADGDGKMLYALAQKRCGNFGTCGG---ADGITGTAAINDDVLELIGAGSGYLLEGECAEAEEVKEKIVQLMTVPLLQATLRYLYRADPASDYDGDA-KHWAELWAFAAAILPLINECSADVAHTVRSNSDIDSEDAPVSAGFVAVKEELESIYSCLGMTCDQVGGLLAG--DSTTDYVPGLEPCGGEEEPTDPTEETTPSSYDPIAGWTPVSDVVEHSKLDLDTLAMETNADLQTDEGFTAAYEAYSLGGNSMYGEDGFRTIQAFSTDAEEKLGGEKWFEVYQNYWGA 1215
A KL GE+ +E+Y+ YWG+ YAD AA GTG Y + VVR E +K A Y WMYVIHEME+A+ CN GD + D H WDEAW FY+G+LEG S + DG + Y LA+KRC NFGTC G D TG + +ND +L L G L +G+C AE + IV+ MTVPL+Q TLRY Y+ADP D A K AE WAF +A+LP I+ C A VA +R+N + +PV+ G+ AV E++ +YSCLG+TC VGG +A D T YV G EPC + P+ P + Y AG+ SDV++H+++DLD E N L+ + + +A Y G SM G RTI FSTDA KL GE+ +E+Y+ YWG+
Sbjct: 1 AGTKLAGEELYELYRAYWGSDSYADDMVVAALDGTGIYAGADDVVREEIASKTAAYSVTWMYVIHEMEDAINDCNEGDITSNDDAVHAWDEAWVFYSGTLEGSSEEGNRDGVLAYRLAEKRCANFGTCNGDDDGDATTGKSLVNDQLLSLYKQGMHALEDGKCNSAEVILRAIVKQMTVPLIQGTLRYAYKADPNGGADTPASKQQAEGWAFTSAVLPQIDACDAGVASMIRANMEYGVA-SPVADGYAAVYAEMQKVYSCLGITCADVGGYVASVTDGTITYVSGTEPCD-DSLPSAPVGPQNGAGYGVYAGYAAGSDVIQHARIDLDH--QEFNTHLENGD-WASAKTIYQNGKYSMK-SSGLRTIAGFSTDAGTKLAGEELYELYRAYWGS 388
BLAST of mRNA_Ecto-sp9_F_contig8938.17123.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1S6_9STRA) HSP 1 Score: 308 bits (790), Expect = 2.130e-95 Identity = 158/297 (53.20%), Postives = 197/297 (66.33%), Query Frame = 1
Query: 25 RTIQAFSTDAEEKLGGEKWFEVYQNYWGAPDYADRFTSAACTGTGSYETVEPVVRAEACTKGAQYQNVWMYVIHEMENAVGACNRGDYGAADGGPHHWDEAWAFYAGSLEGESGNADGDGKMLYALAQKRCGNFGTC----GGADGITGTAAINDDVLELIGAGSGYLLEGECAEAEEVKEKIVQLMTVPLLQATLRYLYRADPASDYDGDAKHWAELWAFAAAILPLINECSADVAHTVRSNSDIDSEDAPVSAGFVAVKEELESIYSCLGMTCDQVGGLLAGDSTTDYVPGLEPC 903
RTI+ FST A K+ GE ++ +Y+ YWG YAD FTSAAC GTG Y V +VR E C KGA YQNVWMYVIHEME+A+G C D D G WDEA AFY GSLEG G GDG +LY+LA KRC NFGTC G ++ +G AA+N+ +++L GS L G+C E E+VK IV MT+PL+Q TLRYLY+ADP +G+ K AELWAF+AA+LP I EC + VA +R NS I + P+ G+VAVKE LE+ YSCLG C VGG++ G +Y+ G+EPC
Sbjct: 312 RTIKGFSTSAATKMAGEPFYGIYRTYWGDAAYADSFTSAACQGTGDYANVPDIVRVECCQKGAPYQNVWMYVIHEMEDAIGDCKSSDLTDNDSGVVAWDEAVAFYTGSLEGVDGK--GDGNLLYSLADKRCANFGTCTGDVGSSNSQSGRAAVNERIIDLFRDGSVKLHNGDCGEVEKVKNAIVDQMTIPLVQGTLRYLYKADPKGANEGN-KARAELWAFSAAVLPRIAECDSGVASMLRENSYIGKD--PMKDGYVAVKEALETTYSCLGFMCSDVGGIIDG-GAGNYISGMEPC 602
BLAST of mRNA_Ecto-sp9_F_contig8938.17123.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y8Q2_9STRA) HSP 1 Score: 299 bits (765), Expect = 5.520e-91 Identity = 179/413 (43.34%), Postives = 233/413 (56.42%), Query Frame = 1
Query: 19 GFRTIQAFSTDAEEKLGGEKWFEVYQNYWGAPDYADRFTSAACTGTGSYETVEPVVRAEACTKGAQYQNVWMYVIHEMENAVGACNRGD-YGAADGGPHHWDEAWAFYAGSLEGESGNADGDGKMLYALAQKRCGNFGTCGG---ADGITGTAAINDDVLELIGAGSGYLLEGECAEAEEVKEKIVQLMTVPLLQATLRYLYRADPA-SDYDGDAKHW----AELWAFAAAILPLINECSADVAHTVRSNSD-IDSEDAPVSAGFVAVKEELESIYSCLGMTCDQVGGLLAG--DSTTDYVPGLEPCGGEEEPTDPTEETTPSSYDPIAGWTPVSDVVEHSKLDLDTLAMETNADLQTDEGFTAAYEAYSLGGNSMYGEDGFRTIQAFSTDAEEKLGGEKWFEVYQNYWGAPD 1221
G RT+Q FST+A KL GE +E+Y+ YWGA DYAD+F +AA GTG Y +VR E +KGA YQN WMYVIHE+E+AV C G D H WDE WAFYAGSLE + G G +YALA+KRC NF TC G D TG +A+N ++L L G L G C A V +IV+ MTVPL+Q LRY Y AD + + W AE WAF AA++P ++ C A +A +R+N + + +PV G+ V +++ YSCLG+TC VGG L+ D YV G PC + PT + +AG+ +DV EH+++DLD +T L F AA + Y G SM G RT+Q FST+A KL GE +E+Y+ YWGA D
Sbjct: 29 GLRTLQGFSTEAGTKLSGEDLYELYRAYWGADDYADQFVTAALDGTGPYVDSSDLVRDEIASKGAAYQNTWMYVIHELEDAVLDCQAGTPMNNEDPAVHAWDEGWAFYAGSLE----DGTGSGVQVYALAEKRCANFFTCTGDDDGDASTGRSAVNAELLSLYQEGQLALNAGNCNGAALVVREIVKQMTVPLIQGVLRYAYLADQSIGGVQATPEEWEDDQAEGWAFTAAVMPQLDACDAALAAEIRANMEFVQGNTSPVQDGYEVVYAKMQRFYSCLGITCADVGGYLSSVTDGVPTYVSGAGPCV-DAAPTGVVGPNNGAGAGVVAGYAFSTDVSEHAQIDLDQDEFDT---LLAAFDFAAAKDIYENGKFSMK-TSGLRTLQGFSTEAGTKLSGEDLYELYRAYWGADD 432
BLAST of mRNA_Ecto-sp9_F_contig8938.17123.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9I4_AURAN) HSP 1 Score: 287 bits (734), Expect = 7.740e-83 Identity = 171/438 (39.04%), Postives = 233/438 (53.20%), Query Frame = 1
Query: 25 RTIQAFSTDAEEKLGGEKWFEVYQNYWGAPDYADRFTSAACTGTGSYETVEPVVRAEACTKGAQYQNVWMYVIHEMENAVGACNRGDY-----GAADGGPHHWDEAWAFYAGSLEGESGNADGDGKMLYALAQKRCGNFGTCGGADGITGTAAINDDVLELIGAGSGYLLEGECAEAEEVKEKIVQLMTVPLLQATLRYLYRADPASDY----DGDA-KHWAELWAFAAAILPLINECSADVAHTVRSNSDIDSEDAPVSA-GFVAVKEELESIYSCLGMTCDQVGGLLAGDSTTDYVPGLEPCGGEEEPTDPTEETTPSSYDPIAGWTPVSDVVEHSKLDLDTLAMETNADLQTDEGFTAAYEAYSLGG----------------------------NSMYGEDGFRTIQAFSTDAEEKLGGEKWFEVYQNYWGAPD 1221
RT++ F+T K+ E W+ VY+NYWG DYAD F A G G++ + + ++RAE KG YQ VWMYV+HE E+A+ C GD A PH WDE WAFYAGS+EG G+ G G+ML+ LA+KRC +FGTC ADGITG A +N L G +L G C++ + IV MT+PL+Q L+Y ++ADPA+ DGD K WAE WAFAAA+LP I+ CS+ VA + N +D+ AP+S G+ +K ++E YSCLG+TC +VG +T G++ C +Y+ IAG+ P +DVV HS +DLD + D +T A YS GG NS+ RT++ F+T K+ E W+ VY+NYWG D
Sbjct: 3076 RTLRGFATSGASKMAEETWWPVYKNYWGDDDYADTFVLKAFDG-GAWASKDDLMRAELVKKGVAYQAVWMYVLHEFEDAIKDCLSGDIYDNDATTAGDSPHAWDEGWAFYAGSIEGTDGS--GSGQMLFQLAEKRCADFGTC--ADGITGDANVNTKALTYAELGRDKILLGMCSDVATEFDLIVDQMTIPLIQGMLKYAFKADPANTQGSCTDGDCPKEWAEGWAFAAAVLPRIHYCSSSVAEVIVDNLSVDAS-APMSVNGYEYLKTQVEKTYSCLGITCAEVGEFQ---NTAGVYDGMDAC--------------LDNYEVIAGYEPATDVVPHSMVDLDMEEISAAVDSYD---WTQAEFVYSNGGGGLCSSSDITTTDTTDSCYGHTTADAKGNSVKDNGAIRTLRGFATSGASKMAEETWWPVYKNYWGDDD 3487
BLAST of mRNA_Ecto-sp9_F_contig8938.17123.1 vs.
Match: Hypothetical (protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XA87_9EUKA) HSP 1 Score: 264 bits (674), Expect = 9.600e-81 Identity = 146/306 (47.71%), Postives = 183/306 (59.80%), Query Frame = 1
Query: 1 SMYGEDGFRTIQAFSTDAEEKLGGEKWFEVYQNYWG---AP--DYADRFTSAACTGTGSYETVEPVVRAEACTKGAQYQNVWMYVIHEMENAVGACNRGDYGAADGGPHHWDEAWAFYAGSLEGESGNADGDGKMLYALAQKRCGNFGTCGGADGITGTAAINDDVLELIGAGSGYLLEGECAEAEEVKEKIVQLMTVPLLQATLRYLYRADPASDYDGDAKHWAELWAFAAAILPLINECSADVAHTVRSNSDIDSEDAPVSAGFVAVKEELESIYSCLGMTCDQVGGLLAGDSTTDYVPGLEPC 903
S+ G RTIQ FST A K+ G KW EVY Y G AP +YAD FTS AC G G + V+ V + E C KG+ YQNVWMYV+ EM++A+ C GD H WDEA AFY GSLEG G+ G G + YALA+KR FGT G+A +N +V++L G LL G+CAE E V++KIV +TVPL+Q LRY DPA AK AE WAFA A+LP IN C+ VA +R N + P+ G+ VK++ ES+YSC+G+TCD VGGLL G+ Y G+EPC
Sbjct: 64 SVKGSGANRTIQGFSTGAVPKMVGSKWMEVYARYHGTQGAPMYNYADVFTSDACLGQGQFAGVDQVAKKELCKKGSAYQNVWMYVVWEMQDAIDDCLGGDLSNNGAAVHAWDEAVAFYVGSLEGTDGS--GAGVLGYALAEKRAPQFGTANS----DGSAIVNAEVMDLFKDGQSKLLAGKCAEVETVRDKIVAQITVPLVQGALRYALLTDPAGPIRQGAKGQAEGWAFAIAVLPQINRCNPTVAAEIRENLQYPNPQGPMVDGYRYVKQQFESVYSCMGITCDSVGGLLNGNEG--YFDGMEPC 361
BLAST of mRNA_Ecto-sp9_F_contig8938.17123.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IQR3_9EUGL) HSP 1 Score: 263 bits (672), Expect = 1.950e-77 Identity = 152/339 (44.84%), Postives = 192/339 (56.64%), Query Frame = 1
Query: 19 GFRTIQAFSTDAEEKLGGEKWFEVYQNYWGAPDYADRFTSAACTGTGSYETVEPVVRAEACTKGAQYQNVWMYVIHEMENAVGACNRGDYGAADGGPHHWDEAWAFYAGSLEGESGNADGDGKMLYALAQKRCGNFGTCGGADGITGTAAINDDVLELIGAGSGYLLEGECAEAEEVKEKIVQLMTVPLLQATLRYLYRADPASDYDGDAKHWAELWAFAAAILPLINECSADVAHTVRSNSDIDSEDAPVSAGFVAVKEELESIYSCLGMTCDQVGGLLAGDSTTDYVPGLEPCGGEEEPTDPTEETTPSSYDPIAGWTPVSDVVEHSKLDLDTLAME 1035
G RT+Q FST + +++++ Y+G+ YA+ F AA GTG + V R E+ KG Y N WMYV+ EME+A+ C G D G H WDEAWAFYAGSLEG G+ G G YALA KRC +FGTC + G +AIN D+L L G L G+C +A V I + M VPL+Q LRY ++ADP + G K AE WAF ILP + +CS A TVR+N DI S +PVS GF AVK+ LES+Y CLG+TC VGG+L G S Y G+EPC D +AG+T SDV EH++LDLD E
Sbjct: 405 GLRTLQGFSTQMSAGKQQAELYQLFKAYYGSATYANDFVMAALEGTGVFAGKATVARQESVKKGISYGNTWMYVVVEMEDAIQDCTAGLLADNDKGVHAWDEAWAFYAGSLEGADGS--GSGVQPYALADKRCVDFGTCTASGG----SAINRDILALFQDGLALLRAGKCTDARSVMTAITRKMAVPLVQGVLRYAWKADPVNGVSGP-KEIAEGWAFTRGILPQVQQCSVAAATTVRNNMDIASA-SPVSGGFAAVKQALESVYPCLGITCGDVGGVLNGAS---YYAGMEPC-----------------RDTLAGFTFGSDVTEHARLDLDQQTFE 715 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8938.17123.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig8938.17123.1 >prot_Ecto-sp9_F_contig8938.17123.1 ID=prot_Ecto-sp9_F_contig8938.17123.1|Name=mRNA_Ecto-sp9_F_contig8938.17123.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=406bp MYGEDGFRTIQAFSTDAEEKLGGEKWFEVYQNYWGAPDYADRFTSAACTGback to top mRNA from alignment at Ecto-sp9_F_contig8938:2177..5705+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig8938.17123.1 ID=mRNA_Ecto-sp9_F_contig8938.17123.1|Name=mRNA_Ecto-sp9_F_contig8938.17123.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3529bp|location=Sequence derived from alignment at Ecto-sp9_F_contig8938:2177..5705+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig8938:2177..5705+ >mRNA_Ecto-sp9_F_contig8938.17123.1 ID=mRNA_Ecto-sp9_F_contig8938.17123.1|Name=mRNA_Ecto-sp9_F_contig8938.17123.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2436bp|location=Sequence derived from alignment at Ecto-sp9_F_contig8938:2177..5705+ (Ectocarpus species9 EcSCA_722f female)back to top |