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Homology
BLAST of mRNA_Ecto-sp9_F_contig8914.17102.1 vs.
Match: Yippee (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMR1_9PHAE) HSP 1 Score: 298 bits (764), Expect = 1.640e-94 Identity = 262/369 (71.00%), Postives = 268/369 (72.63%), Query Frame = 1
Query: 238 MAGAVSSAENGGSLSGSRSIQPXXXXXXXXXXXXXXRPIYGAPGLRQAPAGRPLRPRLPSSSRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLPSNAARVGGRGSYSSISTRXXXXXXXXXXXXXSGLWASIMSLGASAFPASLSGTAAVVGVPPASTPTPRRVARXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------VAAGDRQEGAXXXXXXXXXXX------------------------------VVPVSGSVAGKASSAKKLVYLEGGHSVYTCSMCRAHLATRDHVVSECFHGHGGRAFLFERCVNVSTGRPEDRLLLTGMHVVADISCKACGAELGWKYVSA 1185
MAGA+SSAENGGSLSGSRS XXXXXXXXXXXXXXR I+GAPGLRQAPAGRPLRPRL S SRA XXXXXXXXXXXXXXXXXXXXXXXXX FLPSNAARVGGRGS+SSISTR XXXXXXX SGLWASI+SLGASAFPASLSG AAV GVPP STPTP RVAR XXXXXXXXXXXXXXXXXXXXXX GDR A VVP+SGSVAGKASSA KLVYLEGGHSVYTCSMCRAHLATRDH+VSECF GHGGRAFLFERCVNVS GRPEDR LLTGMHVVADISCKACGAELGWKY A
Sbjct: 1 MAGAISSAENGGSLSGSRSXXXXXXXXXXXXXXXXXRAIHGAPGLRQAPAGRPLRPRLSSLSRASXXXXXXXXXXXXXXXXXXXXXXXXXG-FLPSNAARVGGRGSHSSISTRTXXXXXXX-----SGLWASIVSLGASAFPASLSGIAAVEGVPPPSTPTPWRVARRNAXXXXXXXXXXXXXXXXXXXXXXGGVGTRLRNASSLSVPSSSALLPAAVSGVGDRSRVAVASRAVEGVRVLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVPISGSVAGKASSANKLVYLEGGHSVYTCSMCRAHLATRDHLVSECFQGHGGRAFLFERCVNVSIGRPEDRRLLTGMHVVADISCKACGAELGWKYEEA 363
BLAST of mRNA_Ecto-sp9_F_contig8914.17102.1 vs.
Match: Yippee (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ98_ECTSI) HSP 1 Score: 226 bits (576), Expect = 2.020e-68 Identity = 132/215 (61.40%), Postives = 132/215 (61.40%), Query Frame = 1
Query: 637 MSLGASAFPASLSGTAAVVGVPPASTPTPRRVARXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAGDRQEGAXXXXXXXXXXX--------------------------------VVPVSGSVAGKASSAKKLVYLEGGHSVYTCSMCRAHLATRDHVVSECFHGHGGRAFLFERCVNVSTGRPEDRLLLTGMHVVADISCKACGAELGWKYVSA 1185
MS GASAFPASLSGTAAVVGVPPASTPTPR GDR GA VVPVSGSVAGKASSAKKLVYLEGGHSVYTCSMCRAHLATRDHVVSECFHGHGGRAFLFERCVNVSTGRPEDRLLLTGMHVVADISCKACGAELGWKY A
Sbjct: 1 MSFGASAFPASLSGTAAVVGVPPASTPTPR------------PRNASSLSAPSSSALLPVAVSGVGDRSRGAVARRAGEGVRVLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVPVSGSVAGKASSAKKLVYLEGGHSVYTCSMCRAHLATRDHVVSECFHGHGGRAFLFERCVNVSTGRPEDRLLLTGMHVVADISCKACGAELGWKYEEA 203
BLAST of mRNA_Ecto-sp9_F_contig8914.17102.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZB32_9STRA) HSP 1 Score: 110 bits (275), Expect = 5.340e-25 Identity = 47/80 (58.75%), Postives = 60/80 (75.00%), Query Frame = 1
Query: 937 LVYLEGGHSVYTCSMCRAHLATRDHVVSECFHGHGGRAFLFERCVNVSTGRPEDRLLLTGMHVVADISCKACGAELGWKY 1176
+VYL+G +VY C+ CR HL + D ++S+ FHG GRA+LF++CVNV GRPEDRLL+TGMH V DI CK CG +GW Y
Sbjct: 51 MVYLDGP-AVYACAACRTHLTSHDDIISKSFHGRHGRAYLFDQCVNVDVGRPEDRLLITGMHSVCDIKCKRCGTMVGWTY 129
BLAST of mRNA_Ecto-sp9_F_contig8914.17102.1 vs.
Match: Yippee-like (2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ11_9STRA) HSP 1 Score: 107 bits (267), Expect = 7.380e-24 Identity = 48/81 (59.26%), Postives = 60/81 (74.07%), Query Frame = 1
Query: 943 YLEGGHSVYTCSMCRAHLATRDHVVSECFHGHGGRAFLFERCVNVSTGRPEDRLLLTGMHVVADISCKACGAELGWKYVSA 1185
YL G +Y+CS CRAHL+ D V+S+ F G GGRA+L ERCVNV TG+P+ RLL+TG+H VADISC CG +GW+Y A
Sbjct: 91 YLWG--EIYSCSFCRAHLSCPDSVISKSFTGRGGRAYLLERCVNVRTGKPQQRLLMTGLHTVADISCCGCGTTIGWRYEKA 169
BLAST of mRNA_Ecto-sp9_F_contig8914.17102.1 vs.
Match: Protein (yippee-like n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJY0_9STRA) HSP 1 Score: 101 bits (251), Expect = 1.940e-22 Identity = 47/81 (58.02%), Postives = 55/81 (67.90%), Query Frame = 1
Query: 943 YLEGGHSVYTCSMCRAHLATRDHVVSECFHGHGGRAFLFERCVNVSTGRPEDRLLLTGMHVVADISCKACGAELGWKYVSA 1185
YLEG +Y C C HL+T D ++S FHG GGRAFLF +NVSTG PE R+L+TGMHVVADI C C A +GW Y A
Sbjct: 8 YLEGP-KIYCCEGCGTHLSTNDQIISRAFHGRGGRAFLFNTAINVSTGPPERRMLITGMHVVADIYCIQCQALIGWTYEQA 87
BLAST of mRNA_Ecto-sp9_F_contig8914.17102.1 vs.
Match: Protein (yippee-like n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BE37_PYTIN) HSP 1 Score: 99.4 bits (246), Expect = 7.540e-22 Identity = 41/81 (50.62%), Postives = 59/81 (72.84%), Query Frame = 1
Query: 943 YLEGGHSVYTCSMCRAHLATRDHVVSECFHGHGGRAFLFERCVNVSTGRPEDRLLLTGMHVVADISCKACGAELGWKYVSA 1185
YLE V++C C+ HL++ D +VS+ FHG G+A+LF++CVN++TG PE+R+L+TG+HVV D+ C C LGWKY A
Sbjct: 8 YLESS-KVFSCRECKTHLSSADAIVSKTFHGRTGKAYLFDKCVNITTGPPEERMLMTGLHVVVDVYCNTCWNHLGWKYEEA 87
BLAST of mRNA_Ecto-sp9_F_contig8914.17102.1 vs.
Match: Hypothetical (protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A6T7X6B4_9EUKA) HSP 1 Score: 100 bits (249), Expect = 1.360e-21 Identity = 48/93 (51.61%), Postives = 63/93 (67.74%), Query Frame = 1
Query: 907 VAGKASSAKKLVYLEGGHSVYTCSMCRAHLATRDHVVSECFHGHGGRAFLFERCVNVSTGRPEDRLLLTGMHVVADISCKACGAELGWKYVSA 1185
+A ++ K L+ L VY+C CRAH+AT D +VS+ F G GRAFLF VNVS G E+R+L+TG+H VADI C++CG LGWKY+ A
Sbjct: 51 MAANEATQKTLIRL-AHERVYSCVACRAHVATHDELVSKAFQGRHGRAFLFSNSVNVSLGTKEERMLMTGLHSVADIFCESCGGCLGWKYIEA 142
BLAST of mRNA_Ecto-sp9_F_contig8914.17102.1 vs.
Match: Protein (yippee-like n=3 Tax=Obtectomera TaxID=104431 RepID=A0A821W3U9_9NEOP) HSP 1 Score: 99.4 bits (246), Expect = 1.520e-21 Identity = 50/103 (48.54%), Postives = 62/103 (60.19%), Query Frame = 1
Query: 886 VVPVSGSVAGKASSAKKL------VYLEGGHSVYTCSMCRAHLATRDHVVSECFHGHGGRAFLFERCVNVSTGRPEDRLLLTGMHVVADISCKACGAELGWKY 1176
VV G VAG +SA + YL H Y+C CRAHLA+ D ++S+ F G GRA+LF VNV G E+R+LLTG+H VADI C+ C LGWKY
Sbjct: 4 VVTNRGGVAGDGASATRAPVKTFQAYLPPAHRTYSCIHCRAHLASHDELISKSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIYCECCKTMLGWKY 106
BLAST of mRNA_Ecto-sp9_F_contig8914.17102.1 vs.
Match: Protein (yippee-like n=3 Tax=Geminigeraceae TaxID=589343 RepID=L1JHU0_GUITC) HSP 1 Score: 99.0 bits (245), Expect = 1.690e-21 Identity = 43/77 (55.84%), Postives = 53/77 (68.83%), Query Frame = 1
Query: 955 GHSVYTCSMCRAHLATRDHVVSECFHGHGGRAFLFERCVNVSTGRPEDRLLLTGMHVVADISCKACGAELGWKYVSA 1185
G +Y+CS CR HLA D +VS+ F G GRAFLF VN++ G EDR+L+TG+H VAD+ C C A LGWKYV A
Sbjct: 11 GDRIYSCSGCRTHLAKHDQIVSKAFQGRHGRAFLFSNVVNITLGPKEDRILITGLHTVADVYCNCCQAVLGWKYVEA 87
BLAST of mRNA_Ecto-sp9_F_contig8914.17102.1 vs.
Match: protein (yippee-like 3 n=1 Tax=Acipenser ruthenus TaxID=7906 RepID=UPI00145B8AA0) HSP 1 Score: 98.6 bits (244), Expect = 1.870e-21 Identity = 44/81 (54.32%), Postives = 55/81 (67.90%), Query Frame = 1
Query: 943 YLEGGHSVYTCSMCRAHLATRDHVVSECFHGHGGRAFLFERCVNVSTGRPEDRLLLTGMHVVADISCKACGAELGWKYVSA 1185
YL+ GH Y+C CRAHLA D ++S+ F G GRA+LF VNV G+ E+R+LLTG+H VADI C+ C LGWKY A
Sbjct: 13 YLDDGHRRYSCVHCRAHLANHDDLISKSFQGSQGRAYLFNSVVNVGCGQAEERILLTGLHAVADIYCENCNTTLGWKYEQA 93
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8914.17102.1 vs.
Analysis Date: 2022-09-19 ( Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
| Match Name | E-value | Identity | Description | |
|---|
| Yippee | 1.640e-94 | 71.00 | domain-containing protein n=1 Tax=Ectocarpus sp. C... | [more] |
| Yippee | 2.020e-68 | 61.40 | domain-containing protein n=1 Tax=Ectocarpus silic... | [more] |
| Hypothetical | 5.340e-25 | 58.75 | protein (Fragment) n=1 Tax=Pseudictyota dubia TaxI... | [more] |
| Yippee-like | 7.380e-24 | 59.26 | 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A83... | [more] |
| Protein | 1.940e-22 | 58.02 | yippee-like n=1 Tax=Phaeomonas parva TaxID=124430 ... | [more] |
| Protein | 7.540e-22 | 50.62 | yippee-like n=1 Tax=Pythium insidiosum TaxID=11474... | [more] |
| Hypothetical | 1.360e-21 | 51.61 | protein n=1 Tax=Prymnesium polylepis TaxID=72548 R... | [more] |
| Protein | 1.520e-21 | 48.54 | yippee-like n=3 Tax=Obtectomera TaxID=104431 RepID... | [more] |
| Protein | 1.690e-21 | 55.84 | yippee-like n=3 Tax=Geminigeraceae TaxID=589343 Re... | [more] |
| protein | 1.870e-21 | 54.32 | yippee-like 3 n=1 Tax=Acipenser ruthenus TaxID=790... | [more] |
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 229.6 |
| Seed ortholog evalue | 2.1e-57 |
| Seed eggNOG ortholog | 2880.D7FJ98 |
| Preferred name | YPEL2 |
| KEGG rclass | RC00096,RC00141 |
| KEGG ko | ko:K15428 |
| KEGG Reaction | R00899,R04951 |
| KEGG Pathway | ko00480,ko01100,map00480,map01100 |
| GOs | GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0008150,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0048513,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048731,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0060322,GO:0065007,GO:0070013,GO:0080134,GO:0080135,GO:0090342,GO:0090343,GO:2000772,GO:2000774 |
| EggNOG free text desc. | positive regulation of cellular senescence |
| EggNOG OGs | KOG3399@1,KOG3399@2759 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000,ko01002 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Yippee/Mis18 |
| Ec32 ortholog | Ec-12_008330.1 |
| Exons | 5 |
| Model size | 1185 |
| Cds size | 948 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930948.7814202-CDS-Ecto-sp9_F_contig8914:179..341 | 1622930948.7814202-CDS-Ecto-sp9_F_contig8914:179..341 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig8914 180..341 - |
| 1692278962.84709-CDS-Ecto-sp9_F_contig8914:179..341 | 1692278962.84709-CDS-Ecto-sp9_F_contig8914:179..341 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig8914 180..341 - |
| 1622930948.817433-CDS-Ecto-sp9_F_contig8914:736..823 | 1622930948.817433-CDS-Ecto-sp9_F_contig8914:736..823 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig8914 737..823 - |
| 1692278962.8683734-CDS-Ecto-sp9_F_contig8914:736..823 | 1692278962.8683734-CDS-Ecto-sp9_F_contig8914:736..823 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig8914 737..823 - |
| 1622930948.8330066-CDS-Ecto-sp9_F_contig8914:1317..1431 | 1622930948.8330066-CDS-Ecto-sp9_F_contig8914:1317..1431 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig8914 1318..1431 - |
| 1692278962.8817444-CDS-Ecto-sp9_F_contig8914:1317..1431 | 1692278962.8817444-CDS-Ecto-sp9_F_contig8914:1317..1431 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig8914 1318..1431 - |
| 1622930948.856542-CDS-Ecto-sp9_F_contig8914:1611..2196 | 1622930948.856542-CDS-Ecto-sp9_F_contig8914:1611..2196 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig8914 1612..2196 - |
| 1692278962.891318-CDS-Ecto-sp9_F_contig8914:1611..2196 | 1692278962.891318-CDS-Ecto-sp9_F_contig8914:1611..2196 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig8914 1612..2196 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930948.8732767-UTR-Ecto-sp9_F_contig8914:2196..2235 | 1622930948.8732767-UTR-Ecto-sp9_F_contig8914:2196..2235 | Ectocarpus species9 EcSCA_722f female | UTR | Ecto-sp9_F_contig8914 2197..2235 - |
| 1692278962.9014418-UTR-Ecto-sp9_F_contig8914:2196..2235 | 1692278962.9014418-UTR-Ecto-sp9_F_contig8914:2196..2235 | Ectocarpus species9 EcSCA_722f female | UTR | Ecto-sp9_F_contig8914 2197..2235 - |
| 1622930948.8968341-UTR-Ecto-sp9_F_contig8914:4438..4636 | 1622930948.8968341-UTR-Ecto-sp9_F_contig8914:4438..4636 | Ectocarpus species9 EcSCA_722f female | UTR | Ecto-sp9_F_contig8914 4439..4636 - |
| 1692278962.9138243-UTR-Ecto-sp9_F_contig8914:4438..4636 | 1692278962.9138243-UTR-Ecto-sp9_F_contig8914:4438..4636 | Ectocarpus species9 EcSCA_722f female | UTR | Ecto-sp9_F_contig8914 4439..4636 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig8914.17102.1 >prot_Ecto-sp9_F_contig8914.17102.1 ID=prot_Ecto-sp9_F_contig8914.17102.1|Name=mRNA_Ecto-sp9_F_contig8914.17102.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=316bp
MAGAVSSAENGGSLSGSRSIQPPPQQQQQQQQQHRRRPIYGAPGLRQAPA
GRPLRPRLPSSSRASSSSSSAAARAASRASPPFGGGSGSGGGFLPSNAAR
VGGRGSYSSISTRTNSSSSSSSSSSSSGLWASIMSLGASAFPASLSGTAA
VVGVPPASTPTPRRVARRNAASSSSAIVARAAAAAAGQPPPPPGGVAAGD
RQEGAGAPAPAAAAAAVVPVSGSVAGKASSAKKLVYLEGGHSVYTCSMCR
AHLATRDHVVSECFHGHGGRAFLFERCVNVSTGRPEDRLLLTGMHVVADI
SCKACGAELGWKYVSA back to topmRNA from alignment at Ecto-sp9_F_contig8914:180..4636- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp9_F_contig8914.17102.1 ID=mRNA_Ecto-sp9_F_contig8914.17102.1|Name=mRNA_Ecto-sp9_F_contig8914.17102.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=4457bp|location=Sequence derived from alignment at Ecto-sp9_F_contig8914:180..4636- (Ectocarpus species9 EcSCA_722f female)
CTCCTTCTTTAGACATCAAATTAACGGCAGCAACCAGCGACCAGGACATT
GGGCGAGCAGCGGAAAGGCAAGGAAACCATAACTAGTGAGCCTGGGTGGA
CCTCACCGTGGATCTTCGGCCGCACTTGGCGTGACTGAAAGCTTTCTCGG
GCGACAGAAGAAGAGGGTACAGCGGTGCTGCTGTGGGAAAGTCGTATCGT
AAGTGTGACGCGCGTCGTCTTGAAGAGAGTCGAGACATACATGTATGCTA
TACACTTCACCTCTGCTCTGTGCTCGCACTCTCTGTTTCACTGGCTCCGG
TATCTGATGGCGTCTCCTCGGTGCTGCTGTGCATCAGCTTTCGGTCGGAT
CTCTCTCGTGTCGACACCGGGACAGGGAGTTAGTTCAACATAGACTACAC
GTCCCACGACGATCTTTCAAAGTTTTCAAAAGAGAGAGATGAGGCGCACA
TCGGTAACCCCGCGCACGCCAGTACCTCAAGGCAGCGGGAGAAGCTTCTC
GATGTATACCTTCGCGTGTAGTCGAGTATTGCCAAGAAACCTCGTCGGTT
TCGGGCTTTATGAGTTTCATCGCGCACCGCGCTGCTGAACCAAGCCGCCC
TTTCCGCAGCACGCTCTCTGTGCTCGCTTCTCTTTTTTTCTTTTTGTGAA
TGTTGTGGATACCCCGATCAACCACTCCGTCTCGCAGACCTTCTTATTTA
CTTATTTACAGTGTAGACTATTATGCGTGGTCCTTCATCGTATCTTTCTC
ACCGCGCATACATACTACAGGAGGTTGATGTTTCCTGGAGCATGGTGTTT
CTCTCTGGCGTCTCACCCTCACACACAAGCCCAGCCCGCGCAAAAATAGG
CCCGTTGTGGACGTTTGCAGCACACGATTGTATGAAAGTCTCCTTACAGC
TACTGCTGTAGTTACATACGGCAATCAATTTTCAACGTACCCCTCGCTGG
TGAACACGCGTGTGTCGTTTCCCCGCCTTCCGAGCCCGACGTCTCTCGCT
ACATTATCGACACACCCACACAAGCGCAACCGCCATGCATCATATGGATA
GCAGTCCGGCTTTATTTTTCTTTTGTCTCGGGGTTACCGGCCTGACCCAG
TCTCATTCAACTTTTTTTTTCTCGAACCCATTTGGGGTGCAGGCAGGTTC
GGGTATTGTAGCTATGCAATGAGGCAGTGACGAGAAAAAAATGTTTCAAA
GGATGAGGCTCTCTCTCTCCTTGACCGTTTTCGGATCAGTTTGTGTTTAT
AGGTGTATCGACTACTTACTACTATATTCATCGAATGAGTGTATACAGCA
GTGTTGTCATACGCAAGATACTGACGAGCCCTGTCTGATGTAAGACCATG
GTGTTTCGTGGGCTTTTTCGCTGTGTGCGCATGTCGCGCATACCCGCGCG
AAAGCAGCAGAAGAAATACTTCATCACACGCACCCGACCACAGATCGTCG
TTGTGTGCGTGTGTGTGCCATGCACCTCCTCGCCGAAGGCATTGGTTGTC
TAGGCGACGCACCACCGCCGGCACCATGTGCTCTCTACAGCAACTGCATA
CAGCCGTTGGACGAGTGCGGTTGCTCTGAAGACTTTCTTCGTTTTTTTTT
ATTTCAGTTTTGGGGACGCATACATGGCATACATTTTTTGTTAGCATAAT
CCGACTAGATGCTCCAAATCTAGTCACCACGAACAGGTTCGCAGGCGTAG
TATCCCTTGATTTCCATCCTGAACAGAAAGATCAAGAAGGCGGGCTTGCG
ACCTTCGGAGGGTTTAAGCCCCGGCATGTTGAGTTACGTAAACATAATCC
GATGGATTTCTCGCGACATCAGAAGTGACGACCTCGGCAACTGGAGGAAA
GGAAGGACTCAAAACAAGACGTGGCTGGAGCCAACATGTTGAAGCACTTT
CAAAGAGGTTTAGGTGGTTACCGCTTGTACAATTGTAACAGCAATGCTGT
ATTTTCTTCAACACTTGAGCGCATCCGTCCCTTCGAATGGGGTACTCCAG
TGTTGGTCTCGAGCGGGTGCAGTATTGGTCCGTTATAATGCGGGTGCGAT
CCCGCCGATTTCACCGGCATTCTAGCGGGCAATCGGCGCTATTCCGAGTG
TATGAAACAACTTGAATATTCCATCTGTGAGACGAGATTTCACCCGCATT
ACACAGCCAGGGCAACCGGCATTGTATCGGGACCGCTACTGCTGTATTTG
TTTCATGTCATGCAGACGTGTTTGGAAATGCGACAACTACAACAGCAGTA
GCAACCGTTGGCGTCGAAACTCGCAGAAGCTCAAGCTCCCTCTGCACGAC
TCGTGGGTTGACGAGCCGTTTGCGGGTCTGCGCACGCCTCAGGGCACCAC
CACCACCACCCCCTGACCCTTATTTATTTCTCGCCGTGAATTGTCTTCCA
GGCGCGTCCCGTACGGTACGACCAAAGGATACTCACCGTCATGGCGGGCG
CTGTTTCCTCAGCGGAAAACGGCGGCAGCCTGAGCGGCTCCCGCTCGATC
CAGCCGCCGCCCCAGCAGCAGCAGCAGCAGCAACAGCAACACCGACGGCG
GCCGATCTACGGAGCCCCCGGGCTCCGCCAGGCACCGGCAGGCCGCCCCC
TTCGCCCCCGCCTCCCCTCTTCCTCAAGGGCATCGTCATCGTCGTCTTCT
GCGGCTGCCAGAGCAGCATCCAGAGCCTCGCCGCCCTTCGGTGGCGGCAG
CGGCAGCGGTGGCGGCTTCCTCCCTTCGAACGCGGCAAGGGTAGGGGGAA
GGGGCTCCTATTCTTCCATTAGCACGCGGACCAACAGCAGCAGCAGCAGC
AGTAGCAGCAGCAGCAGCAGCGGACTCTGGGCCTCCATCATGTCGTTGGG
AGCGTCGGCGTTCCCGGCGTCCCTGTCGGGCACCGCGGCCGTGGTGGGGG
TGCCCCCGGCGTCCACACCGACGCCTCGGCGCGTAGCCCGTCGAAACGCC
GCCTCTTCCTCCTCGGCTATCGTGGCGAGGGCGGCGGCGGCGGCGGCGGG
GCAGCCGCCGCCGCCGCCGGGCGGGGTCGGCACCAGGCCGAGAAGCGCGT
CCTCGTTGTCGGCACCGTCGTCCTCGGCTCTTCTTCCCGTGGCGGTGTCG
GGGGTGGGCGACCGTTCACGAATTGCGGTGGCTAGTCGGGCGGGTGAGGG
TGTTCGAGTGCTTCCGCCGCCACCGCCGCCGGCGGTGGTGGCGCCGAGCG
TAGAGGTTGCGGCAGGCGACAGGCAGGAGGGAGCGGGGGCGCCGGCGCCG
GCGGCGGCGGCGGCGGCGGTTGTTCCGGTTTCGGGGTCCGTTGCCGGCAA
AGCGAGCTCGGCGAAGAAAGTGAGAGGGCCCTTGGGTGCGGTGCGTCGCA
GCTACCTGCCGACGCACCGCCGGTCTTGATCTTGCGGATATCTTGCTTGC
TTTTTGAGGAAGGGTTGCGGGCATACCCGATGCACGCCATTCACTATTCC
TTCGTATCCGTCATTGAAAAATCCCACCGCTGAGCGGTGCTGCTTTTGCA
CCGCGTTCGCTGTGGCATTGGATTTCAGTCTTCCATCAACGCTCTCGCCA
TCCCCACCCCCGAAACATTTTGTTAGCCGGGATCCTTGATCACCCGTGGC
ATATCTGGTTTGTCACCGCACACCCAAGGACGATGACCGGCTTCTGGATC
GCCCTTGTGACACGTAGCCTGGACCGGCAAAAACCCGGCATATCGTTCCG
TCCCGACATTGTAGGGGCACGAGGTCAACGGTCTAACGACTACCGCATGC
GTTTACCTGAGTAACCTCCCCCCATTACCACCCCCAACCCCCCTCAACTT
TGTATTTTTTCAGCTGGTGTACCTGGAGGGAGGACACTCGGTGTACACGT
GCTCCATGTGCCGCGCCCACCTTGCAACCCGCGATCACGTAGTCTCAGAG
GTGAGGCAGTGCTCCAAGCGCCTGCGTTTTTCGCTGCCGGACAAACCTGG
TACATCGTGTGGTGTCTTCTGCGGCGGTGTCGAGTAGTGTATGGACCCGA
AAAAAGCTTCCTTCCGGTGACATGAGTGTTTCCACGGTGTAAGCAAGTGT
TTGTTCTGGTCCTCCTTTCCTTGTCCCGGTGCTCTGCGTCTCTCCATCTC
TCTGTCTCTCTCTGTCTCTGTCTCTCTCTCTGCCTGTCTCTCTCTCCCCG
CCCCCCCCCTCTCTCTCTGTCCATCTCTGATTCACCCACTCATTATTGTC
TTTTTCTCTCTTTTCTCTGCCTTGCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCGTGCTTACTTATCGATTTTCGTGCAGTGTTT
CCACGGGCACGGTGGGCGAGCGTTTCTGTTCGAGCGCTGCGTGAACGTCT
CCACCGGGCGGCCGGAGGACCGTCTCCTCCTCACCGGGATGCATGTCGTT
GCCGACATCTCTTGCAAGGCGTGCGGCGCGGAGCTAGGGTGGAAATACGT
GAGTGCT back to topCoding sequence (CDS) from alignment at Ecto-sp9_F_contig8914:180..4636- >mRNA_Ecto-sp9_F_contig8914.17102.1 ID=mRNA_Ecto-sp9_F_contig8914.17102.1|Name=mRNA_Ecto-sp9_F_contig8914.17102.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1896bp|location=Sequence derived from alignment at Ecto-sp9_F_contig8914:180..4636- (Ectocarpus species9 EcSCA_722f female)
ATGGCGGGCGCTGTTTCCTCAGCGGAAAACGGCGGCAGCCTGAGCGGCTC
CCGCTCGATCCAGCCGCCGCCCCAGCAGCAGCAGCAGCAGCAACAGCAAC
ACCGACGGCGGCCGATCTACGGAGCCCCCGGGCTCCGCCAGGCACCGGCA
GGCCGCCCCCTTCGCCCCCGCCTCCCCTCTTCCTCAAGGGCATCGTCATC
GTCGTCTTCTGCGGCTGCCAGAGCAGCATCCAGAGCCTCGCCGCCCTTCG
GTGGCGGCAGCGGCAGCGGTGGCGGCTTCCTCCCTTCGAACGCGGCAAGG
GTAGGGGGAAGGGGCTCCTATTCTTCCATTAGCACGCGGACCAACAGCAG
CAGCAGCAGCAGTAGCAGCAGCAGCAGCAGCGGACTCTGGGCCTCCATCA
TGTCGTTGGGAGCGTCGGCGTTCCCGGCGTCCCTGTCGGGCACCGCGGCC
GTGGTGGGGGTGCCCCCGGCGTCCACACCGACGCCTCGGCGCGTAGCCCG
TCGAAACGCCGCCTCTTCCTCCTCGGCTATCGTGGCGAGGGCGGCGGCGG
CGGCGGCGGGGCAGCCGCCGCCGCCGCCGGGCGGGATGGCGGGCGCTGTT
TCCTCAGCGGAAAACGGCGGCAGCCTGAGCGGCTCCCGCTCGATCCAGCC
GCCGCCCCAGCAGCAGCAGCAGCAGCAACAGCAACACCGACGGCGGCCGA
TCTACGGAGCCCCCGGGCTCCGCCAGGCACCGGCAGGCCGCCCCCTTCGC
CCCCGCCTCCCCTCTTCCTCAAGGGCATCGTCATCGTCGTCTTCTGCGGC
TGCCAGAGCAGCATCCAGAGCCTCGCCGCCCTTCGGTGGCGGCAGCGGCA
GCGGTGGCGGCTTCCTCCCTTCGAACGCGGCAAGGGTAGGGGGAAGGGGC
TCCTATTCTTCCATTAGCACGCGGACCAACAGCAGCAGCAGCAGCAGTAG
CAGCAGCAGCAGCAGCGGACTCTGGGCCTCCATCATGTCGTTGGGAGCGT
CGGCGTTCCCGGCGTCCCTGTCGGGCACCGCGGCCGTGGTGGGGGTGCCC
CCGGCGTCCACACCGACGCCTCGGCGCGTAGCCCGTCGAAACGCCGCCTC
TTCCTCCTCGGCTATCGTGGCGAGGGCGGCGGCGGCGGCGGCGGGGCAGC
CGCCGCCGCCGCCGGGCGGGGTTGCGGCAGGCGACAGGCAGGAGGGAGCG
GGGGCGCCGGCGCCGGCGGCGGCGGCGGCGGCGGTTGTTCCGGTTTCGGG
GTCCGTTGCCGGCAAAGCGAGCTCGGCGAAGAAAGTTGCGGCAGGCGACA
GGCAGGAGGGAGCGGGGGCGCCGGCGCCGGCGGCGGCGGCGGCGGCGGTT
GTTCCGGTTTCGGGGTCCGTTGCCGGCAAAGCGAGCTCGGCGAAGAAACT
GGTGTACCTGGAGGGAGGACACTCGGTGTACACGTGCTCCATGTGCCGCG
CCCACCTTGCAACCCGCGATCACGTAGTCTCAGAGCTGGTGTACCTGGAG
GGAGGACACTCGGTGTACACGTGCTCCATGTGCCGCGCCCACCTTGCAAC
CCGCGATCACGTAGTCTCAGAGTGTTTCCACGGGCACGGTGGGCGAGCGT
TTCTGTTCGAGCGCTGCGTGAACGTCTCCACCGGGCGGCCGGAGGACCGT
CTCCTCCTCACCGGGATGCATGTCGTTGCCGACATCTCTTGCAAGGCGTG
CGGCGCGGAGCTAGGGTGGAAATACGTGAGTGCTTGTTTCCACGGGCACG
GTGGGCGAGCGTTTCTGTTCGAGCGCTGCGTGAACGTCTCCACCGGGCGG
CCGGAGGACCGTCTCCTCCTCACCGGGATGCATGTCGTTGCCGACATCTC
TTGCAAGGCGTGCGGCGCGGAGCTAGGGTGGAAATACGTGAGTGCT back to top
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