mRNA_Ecto-sp9_F_contig890.17083.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig890.17083.1
Unique NamemRNA_Ecto-sp9_F_contig890.17083.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
[Close]
BLAST of mRNA_Ecto-sp9_F_contig890.17083.1 vs.
Match: Non-specific (serine/threonine protein kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF20_ECTSI)

HSP 1 Score: 414 bits (1065), Expect = 3.210e-142
Identity = 213/216 (98.61%), Postives = 215/216 (99.54%), Query Frame = 3 
Query:   69 MELLSQGAEARVFATTFCGRPAVVKERFRKTYRLPALDEKLTTRRTLQEARCMLKAHKAGVRTPCLYQLDSANTKITMEKVDGITAKQFLLDCLQRGDSAAALKVAGEIGKMVAKMHDAQVVHGDLTTSNFMVRSGPGEGDVVAIDFGLASSKPLPEDKAVDLYVLERAFISTHENADPLVNEVMRAYKAASRKADATLHKLSEVRRRGRKREMFG 716
            MELLSQGAEARVFATTFCGRPAVVKERFRKTYRLPALDEKLTT+RTLQEARCMLKA KAGVRTPCLYQLDSANTKITMEKVDGITAKQFLLDCLQ+GDSAAALKVAGEIGKMVAKMHDAQVVHGDLTTSNFMVRSGPGEGDVVAIDFGLASSKPLPEDKAVDLYVLERAFISTHENADPLVNEVMRAYKAASRKADATLHKLSEVRRRGRKREMFG
Sbjct:    1 MELLSQGAEARVFATTFCGRPAVVKERFRKTYRLPALDEKLTTKRTLQEARCMLKARKAGVRTPCLYQLDSANTKITMEKVDGITAKQFLLDCLQKGDSAAALKVAGEIGKMVAKMHDAQVVHGDLTTSNFMVRSGPGEGDVVAIDFGLASSKPLPEDKAVDLYVLERAFISTHENADPLVNEVMRAYKAASRKADATLHKLSEVRRRGRKREMFG 216
[Close]
BLAST of mRNA_Ecto-sp9_F_contig890.17083.1 vs.
Match: Non-specific (serine/threonine protein kinase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BFR4_PYTIN)

HSP 1 Score: 245 bits (625), Expect = 1.260e-75
Identity = 129/218 (59.17%), Postives = 165/218 (75.69%), Query Frame = 3 
Query:   75 LLSQGAEARVFATTFCGRPAVVKERFRKTYRLPALDEKLTTRRTLQEARCMLKAHKAGVRTPCLYQLDSANTKITMEKVDGITAKQFLLDCLQR----GDSAAALKVAGEIGKMVAKMHDAQVVHGDLTTSNFMVRSGPGEGDVVAIDFGLASSKPLPEDKAVDLYVLERAFISTHENADPLVNEVMRAYKAASRKADATLHKLSEVRRRGRKREMFG 716
            L+SQGAEARV+ T FCGRP +VKER +K YRLP LD KL+ RR +QEARC++K  KAGV TPC+Y +D  + ++  EK+ G + K++L    ++    GD+A  LK+A +IG  +AKMHDA +VHGDLTTSN M+ S P   +V  IDFGLA+S+PLPEDKAVDLYV+ERAF STH N++ LV+EV+RAYKA SR++DAT  KL+ VR RGRKR M G
Sbjct:    9 LISQGAEARVYETEFCGRPCIVKERIKKAYRLPVLDAKLSHRRLVQEARCIMKCRKAGVITPCIYLIDEDHGRLXTEKIQGGSVKEYLXTAYKKDPNYGDNA--LKLAYQIGAAIAKMHDADIVHGDLTTSNMML-SSPDAVNVTIIDFGLANSQPLPEDKAVDLYVMERAFNSTHINSEILVDEVLRAYKACSRRSDATFQKLAAVRLRGRKRTMVG 223
[Close]
BLAST of mRNA_Ecto-sp9_F_contig890.17083.1 vs.
Match: Non-specific (serine/threonine protein kinase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TKU5_9STRA)

HSP 1 Score: 240 bits (613), Expect = 8.760e-74
Identity = 126/221 (57.01%), Postives = 162/221 (73.30%), Query Frame = 3 
Query:   63 SAMELLSQGAEARVFATTFCGRPAVVKERFRKTYRLPALDEKLTTRRTLQEARCMLKAHKAGVRTPCLYQLDSANTKITMEKVDGITAKQFLLDCLQRGD---SAAALKVAGEIGKMVAKMHDAQVVHGDLTTSNFMVRSGPGEGDVVAIDFGLASSKPLPEDKAVDLYVLERAFISTHENADPLVNEVMRAYKAASRKADATLHKLSEVRRRGRKREMFG 716
            S+ E+LSQGAEA V+AT F GRP V+KER  KTYRL  LD+KL+ RR +QEARC  K  K+GV TPC++ +D A  ++ ME++ G++ KQFL D         SA AL+V  +IG  +A+MHDA +VHGDLTTSN M ++      +  IDFGLA+S+PLPEDKAVDLYV+ERAF STH +++PLV E++RAYKA SR++DA  HKL +VR RGRKR M G
Sbjct:    8 SSWEVLSQGAEAIVYATDFVGRPCVIKERVIKTYRLRQLDKKLSHRRLVQEARCNFKCRKSGVDTPCIFLIDEAKGRLYMERIHGLSIKQFLFDTYDESSGTYSAVALEVCYQIGVAIARMHDADIVHGDLTTSNLMKKADTTS--ITVIDFGLANSQPLPEDKAVDLYVMERAFQSTHVHSEPLVAEILRAYKAKSRRSDAIFHKLYQVRSRGRKRTMVG 226
[Close]
BLAST of mRNA_Ecto-sp9_F_contig890.17083.1 vs.
Match: Non-specific (serine/threonine protein kinase n=3 Tax=Aphanomyces TaxID=100860 RepID=W4FZ43_9STRA)

HSP 1 Score: 238 bits (608), Expect = 4.920e-73
Identity = 126/221 (57.01%), Postives = 161/221 (72.85%), Query Frame = 3 
Query:   63 SAMELLSQGAEARVFATTFCGRPAVVKERFRKTYRLPALDEKLTTRRTLQEARCMLKAHKAGVRTPCLYQLDSANTKITMEKVDGITAKQFLLDCLQRGD---SAAALKVAGEIGKMVAKMHDAQVVHGDLTTSNFMVRSGPGEGDVVAIDFGLASSKPLPEDKAVDLYVLERAFISTHENADPLVNEVMRAYKAASRKADATLHKLSEVRRRGRKREMFG 716
            S+ E+LSQGAEA V+AT F GRP V+KER  KTYRL  LD+KL+ RR +QEARC  K  KAGV TPC++ +D A  ++ ME++ G++AKQ+L D         +  AL V  +IG  +A+MHDA +VHGDLTTSN M +       +  IDFGLA+S+PLPEDKAVDLYV+ERAF STH +++PLV E++RAYKA SR++DAT HKL +VR RGRKR M G
Sbjct:    8 SSWEVLSQGAEAIVYATDFAGRPCVIKERVVKTYRLRQLDKKLSHRRLVQEARCNFKCRKAGVDTPCIFLIDEAKGRLYMERIQGMSAKQYLYDSYNATTQQYATDALAVCYQIGVAIARMHDADIVHGDLTTSNLMKKDSLST--ITVIDFGLANSQPLPEDKAVDLYVMERAFQSTHVHSEPLVAEILRAYKAKSRRSDATFHKLYQVRSRGRKRTMVG 226
[Close]
BLAST of mRNA_Ecto-sp9_F_contig890.17083.1 vs.
Match: Non-specific (serine/threonine protein kinase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUU0_GLOUD)

HSP 1 Score: 238 bits (607), Expect = 6.720e-73
Identity = 123/217 (56.68%), Postives = 162/217 (74.65%), Query Frame = 3 
Query:   75 LLSQGAEARVFATTFCGRPAVVKERFRKTYRLPALDEKLTTRRTLQEARCMLKAHKAGVRTPCLYQLDSANTKITMEKVDGITAKQFLLDCLQRGDSA---AALKVAGEIGKMVAKMHDAQVVHGDLTTSNFMVRSGPGEGDVVAIDFGLASSKPLPEDKAVDLYVLERAFISTHENADPLVNEVMRAYKAASRKADATLHKLSEVRRRGRKREMFG 716
            L+SQGAEA+V+ T F GRP +VKER +K+YRLP LD+KL+ RR +QEARC++K  KAGV TPC+Y +D    ++  EK++G + K++L     + D     AA K+A +IG  +A+MHDA +VHGDLTTSN M+RS     +V  IDFGLA+++PLPEDKAVDLYV+ERAF STH N++ LV+EV+RAYKA SR+AD+   KL +VR RGRKR M G
Sbjct:   10 LISQGAEAKVYETVFSGRPCIVKERVKKSYRLPVLDKKLSHRRLVQEARCIIKCRKAGVVTPCIYLIDEERGRLYTEKINGGSVKEYLRRAFTKEDGTYVPAATKLAYQIGVAIARMHDADIVHGDLTTSNMMLRSEDAT-EVTMIDFGLANTQPLPEDKAVDLYVMERAFNSTHVNSEMLVDEVLRAYKACSRRADSIFQKLGQVRLRGRKRTMVG 225
[Close]
BLAST of mRNA_Ecto-sp9_F_contig890.17083.1 vs.
Match: Non-specific (serine/threonine protein kinase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XQZ6_9STRA)

HSP 1 Score: 235 bits (600), Expect = 6.800e-72
Identity = 122/219 (55.71%), Postives = 159/219 (72.60%), Query Frame = 3 
Query:   69 MELLSQGAEARVFATTFCGRPAVVKERFRKTYRLPALDEKLTTRRTLQEARCMLKAHKAGVRTPCLYQLDSANTKITMEKVDGITAKQFLLDCLQ---RGDSAAALKVAGEIGKMVAKMHDAQVVHGDLTTSNFMVRSGPGEGDVVAIDFGLASSKPLPEDKAVDLYVLERAFISTHENADPLVNEVMRAYKAASRKADATLHKLSEVRRRGRKREMFG 716
            +E++SQGAEA ++A  F GRP V+KER  KTYRL  LD KL+ RR +QEARC +K  KAGV TPC++ +D  + ++ ME++ G + KQFL D      +    AAL+V  ++G  +A+MHDA +VHGDLTTSN M +       +  IDFGLA+S+PLPEDKAVDLYV+ERAF STH N+DPLV E++RAYKA SR++DAT H+L +VR RGRKR M G
Sbjct:    5 LEVISQGAEAILYAGDFAGRPCVIKERVVKTYRLRQLDRKLSHRRLVQEARCNMKCRKAGVDTPCIFVIDEKHGRLCMERILGKSVKQFLYDSYNAETKQYDPAALEVCYQVGVAIARMHDADIVHGDLTTSNLMKKDA-STSSITVIDFGLANSQPLPEDKAVDLYVMERAFQSTHVNSDPLVAEILRAYKAKSRRSDATFHRLYQVRSRGRKRNMVG 222
[Close]
BLAST of mRNA_Ecto-sp9_F_contig890.17083.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CI69_PYTOL)

HSP 1 Score: 235 bits (599), Expect = 9.600e-72
Identity = 124/216 (57.41%), Postives = 158/216 (73.15%), Query Frame = 3 
Query:   75 LLSQGAEARVFATTFCGRPAVVKERFRKTYRLPALDEKLTTRRTLQEARCMLKAHKAGVRTPCLYQLDSANTKITMEKVDGITAKQFLLDCLQRGDSAA--ALKVAGEIGKMVAKMHDAQVVHGDLTTSNFMVRSGPGEGDVVAIDFGLASSKPLPEDKAVDLYVLERAFISTHENADPLVNEVMRAYKAASRKADATLHKLSEVRRRGRKREMFG 716
            L+SQGAEA+V+ T F GRP +VKER +K+YRLP LD KL+ RR +QEARC++K  KAGV TPC+Y +D  N +I  EK+ G + K++L    ++       A ++A  IG  +AKMHDA +VHGDLTTSN M+ S     +V  IDFGLA+S+PLPEDKAVDLYV+ERAF STH N++ LV EV+RAYKA SR+AD+T  KL+ VR RGRKR M G
Sbjct:    8 LISQGAEAKVYETEFSGRPCIVKERIKKSYRLPILDTKLSHRRLVQEARCIMKCRKAGVLTPCIYLIDEDNGRIYTEKIQGGSVKEYLRAAYKKDPKYGPEATRLAYSIGAAIAKMHDADIVHGDLTTSNMMLSSAEAT-EVTVIDFGLANSQPLPEDKAVDLYVMERAFDSTHINSELLVAEVLRAYKACSRRADSTFQKLAAVRLRGRKRTMVG 222
[Close]
BLAST of mRNA_Ecto-sp9_F_contig890.17083.1 vs.
Match: Non-specific (serine/threonine protein kinase n=2 Tax=Peronosporaceae TaxID=4777 RepID=G4ZHC3_PHYSP)

HSP 1 Score: 233 bits (594), Expect = 5.560e-71
Identity = 124/218 (56.88%), Postives = 159/218 (72.94%), Query Frame = 3 
Query:   72 ELLSQGAEARVFATTFCGRPAVVKERFRKTYRLPALDEKLTTRRTLQEARCMLKAHKAGVRTPCLYQLDSANTKITMEKVDGITAKQFLLDCLQRGD---SAAALKVAGEIGKMVAKMHDAQVVHGDLTTSNFMVRSGPGEGDVVAIDFGLASSKPLPEDKAVDLYVLERAFISTHENADPLVNEVMRAYKAASRKADATLHKLSEVRRRGRKREMFG 716
            +L+SQGAEA+VF T F GRP +VKER +K+YRL  LD+KL+ RR +QEARC+LK  +AGV TP ++ +D   +++ +EKV G + K +L    +  D      ALK A +IG  +AKMHDA +VHGDLTTSN M+ S     DV  IDFGLA+S+PLPEDKAVDLYV+ERAF STH N++ LV EV+RAY+A SR++DA   KLS+VR RGRKR M G
Sbjct:    7 QLISQGAEAKVFETDFAGRPCIVKERIKKSYRLSVLDKKLSHRRLVQEARCILKCRRAGVLTPAIFLVDEDKSRLYLEKVQGGSLKDYLRRAYKLADPKYGPMALKKAYQIGAAIAKMHDADIVHGDLTTSNMMLSSDDAT-DVTMIDFGLANSQPLPEDKAVDLYVMERAFASTHVNSELLVEEVLRAYRAKSRRSDAIFQKLSQVRLRGRKRTMVG 223
[Close]
BLAST of mRNA_Ecto-sp9_F_contig890.17083.1 vs.
Match: Non-specific (serine/threonine protein kinase n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CZW3_SAPPC)

HSP 1 Score: 232 bits (592), Expect = 1.110e-70
Identity = 126/224 (56.25%), Postives = 158/224 (70.54%), Query Frame = 3 
Query:   54 AGLSAMELLSQGAEARVFATTFCGRPAVVKERFRKTYRLPALDEKLTTRRTLQEARCMLKAHKAGVRTPCLYQLDSANTKITMEKVDGITAKQFLL---DCLQRGDSAAALKVAGEIGKMVAKMHDAQVVHGDLTTSNFMVRSGPGEGDVVAIDFGLASSKPLPEDKAVDLYVLERAFISTHENADPLVNEVMRAYKAASRKADATLHKLSEVRRRGRKREMFG 716
            A  S ME+LSQGAEA V+ TTF GRP V+KER  K YRLP LD+KL+ RR +QEARC +K  KAGV TPC+  +D    ++ ME++ G++ KQ+L    D   +  + AA ++A +IG  VA+MHDA +VHGDLTTSN M +       +  IDFGLA+S+PLPEDKAVDLYV+ERAF STH  +D LV E++RAYKA SR+AD   HKL  VR RGRKR M G
Sbjct:    2 ASTSEMEVLSQGAEAIVYGTTFAGRPCVIKERVVKAYRLPQLDKKLSHRRLVQEARCNMKCRKAGVDTPCILLIDETKGRLFMERIIGLSVKQWLFNMYDAATQTYAPAAKELAYQIGVAVARMHDADIVHGDLTTSNLMKKDDVTT--ITVIDFGLANSQPLPEDKAVDLYVMERAFQSTHVQSDDLVAEILRAYKAKSRRADTVFHKLYLVRSRGRKRTMVG 223
[Close]
BLAST of mRNA_Ecto-sp9_F_contig890.17083.1 vs.
Match: Non-specific (serine/threonine protein kinase n=17 Tax=Phytophthora TaxID=4783 RepID=H3GJN2_PHYRM)

HSP 1 Score: 231 bits (589), Expect = 3.010e-70
Identity = 125/217 (57.60%), Postives = 159/217 (73.27%), Query Frame = 3 
Query:   72 ELLSQGAEARVFATTFCGRPAVVKERFRKTYRLPALDEKLTTRRTLQEARCMLKAHKAGVRTPCLYQLDSANTKITMEKVDGITAKQFLLDC--LQRGDSAAALKVAGEIGKMVAKMHDAQVVHGDLTTSNFMVRSGPGEGDVVAIDFGLASSKPLPEDKAVDLYVLERAFISTHENADPLVNEVMRAYKAASRKADATLHKLSEVRRRGRKREMFG 716
            +L+SQGAEA+VF T F GR  VVKER +K+YRLP LD+KL+ RR +QEARC+LK  +AGV TP ++ +D   +++ +EKV G + K +L     L       ALK A +IG+ +AKMHDA +VHGDLTTSN M+ S     DV  IDFGLA+S+PLPEDKAVDLYV+ERAF STH N++ LV EV+RAY+A SR++DA   KLS+VR RGRKR M G
Sbjct:    7 QLISQGAEAKVFETDFAGRSCVVKERVKKSYRLPVLDKKLSHRRLVQEARCILKCRRAGVLTPAIFLVDEDKSRLYLEKVPGGSLKDYLRRAYKLDPKYGPMALKKAYQIGEAIAKMHDADIVHGDLTTSNMMLSSDDAT-DVTMIDFGLANSQPLPEDKAVDLYVMERAFASTHVNSELLVEEVLRAYRAKSRRSDAIFQKLSQVRLRGRKRTMVG 222
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig890.17083.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Non-specific3.210e-14298.61serine/threonine protein kinase n=2 Tax=Ectocarpus... [more]
Non-specific1.260e-7559.17serine/threonine protein kinase n=1 Tax=Pythium in... [more]
Non-specific8.760e-7457.01serine/threonine protein kinase n=1 Tax=Aphanomyce... [more]
Non-specific4.920e-7357.01serine/threonine protein kinase n=3 Tax=Aphanomyce... [more]
Non-specific6.720e-7356.68serine/threonine protein kinase n=1 Tax=Globispora... [more]
Non-specific6.800e-7255.71serine/threonine protein kinase n=1 Tax=Aphanomyce... [more]
Uncharacterized9.600e-7257.41protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
Non-specific5.560e-7156.88serine/threonine protein kinase n=2 Tax=Peronospor... [more]
Non-specific1.110e-7056.25serine/threonine protein kinase n=4 Tax=Saprolegni... [more]
Non-specific3.010e-7057.60serine/threonine protein kinase n=17 Tax=Phytophth... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig890contigEcto-sp9_F_contig890:16098..20207 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score240.0
Seed ortholog evalue1.1e-60
Seed eggNOG ortholog157072.XP_008876715.1
Preferred nameTP53RK
KEGG koko:K02154,ko:K08851,ko:K09140
KEGG TC3.A.2.2
KEGG Pathwayko00190,ko01100,ko04142,ko04145,ko04721,ko04966,ko05110,ko05120,ko05152,ko05165,ko05323,map00190,map01100,map04142,map04145,map04721,map04966,map05110,map05120,map05152,map05165,map05323
KEGG ModuleM00160
GOsGO:0000003,GO:0000166,GO:0000278,GO:0000281,GO:0000282,GO:0000408,GO:0000722,GO:0000723,GO:0000910,GO:0001558,GO:0002039,GO:0002949,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006310,GO:0006312,GO:0006355,GO:0006357,GO:0006396,GO:0006399,GO:0006400,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007049,GO:0007163,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0009451,GO:0009653,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010646,GO:0010647,GO:0016043,GO:0016070,GO:0016301,GO:0016310,GO:0016462,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0019538,GO:0019954,GO:0022402,GO:0023051,GO:0023056,GO:0030010,GO:0030154,GO:0030307,GO:0030435,GO:0030436,GO:0030447,GO:0030448,GO:0030554,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032006,GO:0032008,GO:0032200,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0036211,GO:0040007,GO:0040008,GO:0040014,GO:0040018,GO:0042592,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043934,GO:0043936,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045893,GO:0045927,GO:0045935,GO:0045944,GO:0046483,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048638,GO:0048639,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0051128,GO:0051171,GO:0051173,GO:0051239,GO:0051240,GO:0051252,GO:0051254,GO:0051276,GO:0051301,GO:0060249,GO:0060255,GO:0061640,GO:0065007,GO:0065008,GO:0070013,GO:0070525,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901796,GO:1902531,GO:1902533,GO:1902680,GO:1903047,GO:1903506,GO:1903508,GO:2000112,GO:2001141
EggNOG free text desc.tRNA threonylcarbamoyladenosine metabolic process
EggNOG OGsCOG3642@1,KOG3087@2759
EC2.7.11.1
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03009,ko03016,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSerine/threonine protein kinase
Ec32 orthologEc-21_006400.1
Exons7
Model size1377
Cds size651
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930945.980263-UTR-Ecto-sp9_F_contig890:16097..167551622930945.980263-UTR-Ecto-sp9_F_contig890:16097..16755Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig890 16098..16755 -
1692278961.510568-UTR-Ecto-sp9_F_contig890:16097..167551692278961.510568-UTR-Ecto-sp9_F_contig890:16097..16755Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig890 16098..16755 -
1622930946.153131-UTR-Ecto-sp9_F_contig890:20139..202071622930946.153131-UTR-Ecto-sp9_F_contig890:20139..20207Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig890 20140..20207 -
1692278961.6004522-UTR-Ecto-sp9_F_contig890:20139..202071692278961.6004522-UTR-Ecto-sp9_F_contig890:20139..20207Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig890 20140..20207 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930946.0050185-CDS-Ecto-sp9_F_contig890:16755..168391622930946.0050185-CDS-Ecto-sp9_F_contig890:16755..16839Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig890 16756..16839 -
1692278961.523288-CDS-Ecto-sp9_F_contig890:16755..168391692278961.523288-CDS-Ecto-sp9_F_contig890:16755..16839Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig890 16756..16839 -
1622930946.0273087-CDS-Ecto-sp9_F_contig890:17347..174371622930946.0273087-CDS-Ecto-sp9_F_contig890:17347..17437Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig890 17348..17437 -
1692278961.5328455-CDS-Ecto-sp9_F_contig890:17347..174371692278961.5328455-CDS-Ecto-sp9_F_contig890:17347..17437Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig890 17348..17437 -
1622930946.0504022-CDS-Ecto-sp9_F_contig890:18143..182601622930946.0504022-CDS-Ecto-sp9_F_contig890:18143..18260Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig890 18144..18260 -
1692278961.5440383-CDS-Ecto-sp9_F_contig890:18143..182601692278961.5440383-CDS-Ecto-sp9_F_contig890:18143..18260Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig890 18144..18260 -
1622930946.076086-CDS-Ecto-sp9_F_contig890:18544..186181622930946.076086-CDS-Ecto-sp9_F_contig890:18544..18618Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig890 18545..18618 -
1692278961.5540287-CDS-Ecto-sp9_F_contig890:18544..186181692278961.5540287-CDS-Ecto-sp9_F_contig890:18544..18618Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig890 18545..18618 -
1622930946.0965314-CDS-Ecto-sp9_F_contig890:19256..193981622930946.0965314-CDS-Ecto-sp9_F_contig890:19256..19398Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig890 19257..19398 -
1692278961.5633006-CDS-Ecto-sp9_F_contig890:19256..193981692278961.5633006-CDS-Ecto-sp9_F_contig890:19256..19398Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig890 19257..19398 -
1622930946.1189706-CDS-Ecto-sp9_F_contig890:19799..199131622930946.1189706-CDS-Ecto-sp9_F_contig890:19799..19913Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig890 19800..19913 -
1692278961.5737457-CDS-Ecto-sp9_F_contig890:19799..199131692278961.5737457-CDS-Ecto-sp9_F_contig890:19799..19913Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig890 19800..19913 -
1622930946.1364331-CDS-Ecto-sp9_F_contig890:20109..201391622930946.1364331-CDS-Ecto-sp9_F_contig890:20109..20139Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig890 20110..20139 -
1692278961.5843499-CDS-Ecto-sp9_F_contig890:20109..201391692278961.5843499-CDS-Ecto-sp9_F_contig890:20109..20139Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig890 20110..20139 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig890.17083.1prot_Ecto-sp9_F_contig890.17083.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig890 16756..20139 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig890.17083.1

>prot_Ecto-sp9_F_contig890.17083.1 ID=prot_Ecto-sp9_F_contig890.17083.1|Name=mRNA_Ecto-sp9_F_contig890.17083.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=217bp
MELLSQGAEARVFATTFCGRPAVVKERFRKTYRLPALDEKLTTRRTLQEA
RCMLKAHKAGVRTPCLYQLDSANTKITMEKVDGITAKQFLLDCLQRGDSA
AALKVAGEIGKMVAKMHDAQVVHGDLTTSNFMVRSGPGEGDVVAIDFGLA
SSKPLPEDKAVDLYVLERAFISTHENADPLVNEVMRAYKAASRKADATLH
KLSEVRRRGRKREMFG*
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mRNA from alignment at Ecto-sp9_F_contig890:16098..20207-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig890.17083.1 ID=mRNA_Ecto-sp9_F_contig890.17083.1|Name=mRNA_Ecto-sp9_F_contig890.17083.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=4110bp|location=Sequence derived from alignment at Ecto-sp9_F_contig890:16098..20207- (Ectocarpus species9 EcSCA_722f female)
CGGGCGTTTGGAGTGTAGAGGGAGGTTGGTTGAAACCAGAGAGAGGGAAA
AGGGCGGGACTTTCTGCGATGGAGCTGCTTAGTCAAGGGGCAGAAGCGGT
GAGATCGCCACCCACTTTTTGCGTATTGCACTCCCTTGATCTCGTGTGGC
CTGCAACAACAGCAGAAGTAGCATCACCTGCTTTAGCGCCCCCAGCGACT
CACGTCCTGCTTTAGAATAGGCAATCAAAACGGTTAGGTTTCAACCAATC
GCTCGCTGTTGATTTCTACGACTGTTGATGCTTACCAAATACAGCGGGTC
TTCGCCACGACGTTCTGCGGTCGTCCGGCGGTGGTCAAGGAGCGCTTCCG
AAAAACCTACCGCCTGCCGGCTCTGGATGAGAAACTCACGACAAGGAGAA
CGCTACAAGTGGGTTGGAAGGCGTTGGATCGTACGCATTCAGATCGTAAG
CGATGCTTGTTTGAATATGGACCCATGGTTCCATCCTTTCCCCCTTTATG
AAGAGCGACGTGGGTCTTTGCGATGCCATCGTTGCTGTCAGTTTTGGTTC
TTCACTGCTCTCATACATACCCATCTGGCGAGTACAGCGCAGCAGTACGC
CTCGATCTTCTGTCGCTTGGTCTCACCGAAAAATGCGGTTTTTATTGTTG
AAATCAATACTGGGTCATAATTTCAGTCGTACGTGGCAGTTTCTGCAGCA
TGTTCTTATTGTGTTTGTGTCGCTCGTGGTGTAAAGTTGTCGGCGGAGTG
TTGTGTGGGTGTACAGCAGTATGTGCTGATGGTTGCCTCTTTTCGGCCGG
GGTCCGCAGGAAGCGAGATGCATGCTCAAGGCACACAAGGCGGGAGTCAG
GACACCGTGCCTCTACCAGCTGGACAGCGCCAACACCAAGATCACCATGG
AGAAGGTCGACGGAATCACGGCGAAACAGTTCTTGCTGGACTGCCTTCAG
AGTGAGCGTGCCACTCTCGGTCGATACAGCACCCCTGGGCACTGCTGTTG
CGGCGCTATTGTGCTTGTTTGTAGACTTGGGATTGTACTTCAGTTGCACG
TATAATGTAGCGTATCAGGTGACCTTCAACGGACGGAACGGTCATCCAGC
AACCCTCTCGCTCGCAAGCCTTCACTGCACGGATGGCCACAGGGTTTCGT
TTCAAGTCCATTGCACGAGCTTGCACGTTGTGGTTGTTGGTTTCACAGCT
GTTGGAAAAAGGGCCCTTTATTCGGAAGGAATTGGTCCAGCCTGCACAGT
GGCAAATGGAAGTCTCGAACAATCTTGCAGTGGTGGCCCATGAATTCAGT
TTTGCTATTGTTCAAAACCTGGTGGTGTCGCACTTGTCTGCCCGAGAGAC
CAAACGCCTTCAAACCAAGCTATTTAGTAACACCAGGACACCCGAGCCGC
TTGAACCGTTGGCTTGAAGGACCAAATGTTCCCGAAACAGGCACTAATCA
AATTCACCGCGCGACCCCTTTACCCTCAACCCTTGTCATGCTCGTCCATT
TGTCCCTGTATCCTTGGGTGGGTCTTGGTTCTTACTGCCGTTACCTGCTG
TGCTGTCCTATCGGTTCTCGACGACGACCTGCCTGCCAGGGGGAGATTCT
GCGGCGGCCCTCAAGGTTGCGGGAGAGATCGGGAAGATGGTGGCCAAGAT
GCACGACGCTCAGGTGGGGCACCTAGGCCCCAACCCTCGCTTTTTCTTCC
AGCAGCTGCTGTTGCCGAATGGATGTGATTTTGCACGCTCCAACTGTTGC
AATCTTCATCATATCGGGCTCCTGCGTTAGTAGACTGTATCGTTGTTCTG
GTCTGTGAGTGTCACCGTGTCTGAGGAGGCGAAAAGCAAAGCTCCGTGTC
TCCAACGGCGCACCTTACTTTTGTTGACCCCACGCGGTCTGAGTGGCCCT
AGTCGTTGAATTGTTATGGGTCCAACGTCCAACCTGCCTGTCCCAAGGTG
GTGCACGGCGATCTGACAACGTCCAATTTTATGGTTCGGAGCGGTCCCGG
AGAAGGAGACGTAGTGGCGATCGACTTCGGCCTTGCTTCGTCGAAGCCAC
TCCCGGAGGACAAGGTGAGCGTGCAGGAACGAGACTTACGAACAGAAGGG
TTGACAGCGGATGTGGTTACCAAGGGCCATTCCAAACAAATCGTGTCTCG
CGTTTCTGCTGCTGATGATTCTCGCGCGCTGGTGGTAGTCACGTCCCGCG
CTCTCTGGAATTGTCAAACGATGATCCTCTTGAAGAGGGTCTGTTGAGCT
TGTTGCTTGTTTGCCGGCTGAAGCTGGGGCCCAGTGTTTGATTTATGTGG
CCTCGGTATGCGTCACTGTTGTACTGGCAGTTGAGACTCGAAGGAGAGCC
GCTTGTAGTCTTTGTGTTTCACTGACTGCTCGCTGGGCCCGTGGTCGTAC
GGGTGGCGTTGCTGCCTTGTTTGATGCACGATTAACCATCAACGAGTTGA
AAGGTTGATCACCGCCACGCAATGGATAACTGTGGTATGGTCATTTATTA
CCCAACACGTTTAAAGGTATGCCTTGCAATGGGCAACCTATTTTTAGCCA
GACCAACACGATAAAATGGTTACGGCTATGGTTGAGGCGAAAGGCCATGT
CTTCCGTTTTTCAGCGCATATATCATCGCGTTCGCGGTGAGCGTAGACTC
TCGCGGTGGGCGTCGACAGGTCCTTGGCGTGACCTGGTCCGGCATTGTGT
CCTTTGTCGGGGTGATGTTGCAATGCAATAGTGAAACGAATTTTGTCTCT
TGGCCGGAAAACTTACGCAGGCGGTTGACCTGTACGTGCTGGAGAGGGCG
TTCATTTCCACACACGAAAATGCGGATCCCTTGGTGAACGAGGTCATGCG
AGCTTACAAGGTTTGCGCGAGCCGTGATTTGTTAACACAAGAATGCTTGC
CCGCATGTCATGCATCCTGTGTGCCAGGCAGACCAGGCTTCGATTCTCTC
GCTTGCAACCTGCCTCGCCTCTTATCAGCTGGATAAATGCAGAGAAAATC
TATCTATTTAGTGGTGCACGACACCGATGGGTAGTCTGATCATGTAACAG
AGAATGAGGTAGTGTTGAGGGCGAAAAATACATGTTTTCCTCGGTGAGGG
TTGCCGGTGAGTCACGGATCGATTGGGCCGTGTTCGTTCATTTCATCGAC
CACGTTTCGGATACAGATCAACTGTTACTGCTCCACATGTTCGTTTGAAG
CCACGTATGCCTCCATGTTCTATTTTGTTTGCCGGGGCTTATTTGGTCCA
GGCTCCTTCTCCTCACCTATGTATCGCATCGTACCATGACATGTCAATCA
TGCCACCCATATTGCCACAAAAATCCGTATGCTCGTGGTTCGTCTCCTAT
CGTGTGTCGCCAAAACAGGCGGCATCGCGCAAGGCGGATGCGACGCTACA
CAAGCTATCCGAGGTTCGACGACGAGGGCGAAAGCGAGAGATGTTTGGGT
GATGCCATTTTCTGCGTCCTGTTTTTCCACTGGGCCTGAAGCGAGCGAAA
AAATGGTAACATTGTTTCGGTGTGTCTGTTGTCCAGACCAAAGAGGACGG
AGCGGAAGATGCCCGGTGGTACATCACTCGATGGTGCTCCAAAAGTGTGA
CTGACGAAGTTTGGAGCAGCGCCGGTCGCAACATTTTTTGCTACGCTCGT
ACCGGATGGGCGACCAAAAGAAGATGTACTGTCGGCGTAGAAGAGGTTGG
ACTCTTGTGTAACGAAGGAGGTGGTGTGCCACATCAAGGGGTTTCTGACT
TCGTAACATATAATGGCTCCGTCCCCCAGGGGTGAAGAGCAAGAGAGTGC
TCTCAAGGTGTTTGTAGTAAGGGGCTTCGTTGTCTCGAGGTTTGCTGGCA
TCTCACGGGACCATGGCCAATACCACGAATGACGTTGCTCGTGGAGTTCT
TACCTAAATGAAATCCCAGGACGAGCACGGCATCATCCAAAGAAGTTTGA
GGTTACGAATTGTGGAGTGAAACGGCACACAACAGTCCTGTGCCGAGTTA
TCGCGAGACGATGGCTGTCGCGATAGGTAGTATACCGTTCACTGAAAATA
TGGGTACTGAGGGGAACCATGGGGTTCCATGCTGTTGCATCAAAACGCCG
GAACCAGAAC
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig890:16098..20207-

>mRNA_Ecto-sp9_F_contig890.17083.1 ID=mRNA_Ecto-sp9_F_contig890.17083.1|Name=mRNA_Ecto-sp9_F_contig890.17083.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1302bp|location=Sequence derived from alignment at Ecto-sp9_F_contig890:16098..20207- (Ectocarpus species9 EcSCA_722f female)
ATGGAGCTGCTTAGTCAAGGGGCAGAAGCGATGGAGCTGCTTAGTCAAGG
GGCAGAAGCGCGGGTCTTCGCCACGACGTTCTGCGGTCGTCCGGCGGTGG
TCAAGGAGCGCTTCCGAAAAACCTACCGCCTGCCGGCTCTGGATGAGAAA
CTCACGACAAGGAGAACGCTACAACGGGTCTTCGCCACGACGTTCTGCGG
TCGTCCGGCGGTGGTCAAGGAGCGCTTCCGAAAAACCTACCGCCTGCCGG
CTCTGGATGAGAAACTCACGACAAGGAGAACGCTACAAGAAGCGAGATGC
ATGCTCAAGGCACACAAGGCGGGAGTCAGGACACCGTGCCTCTACCAGCT
GGACAGCGCCAACACCAAGATCACCATGGAGAAGGTCGACGGAATCACGG
CGAAACAGTTCTTGCTGGACTGCCTTCAGAGAAGCGAGATGCATGCTCAA
GGCACACAAGGCGGGAGTCAGGACACCGTGCCTCTACCAGCTGGACAGCG
CCAACACCAAGATCACCATGGAGAAGGTCGACGGAATCACGGCGAAACAG
TTCTTGCTGGACTGCCTTCAGAGGGGAGATTCTGCGGCGGCCCTCAAGGT
TGCGGGAGAGATCGGGAAGATGGTGGCCAAGATGCACGACGCTCAGGGGG
AGATTCTGCGGCGGCCCTCAAGGTTGCGGGAGAGATCGGGAAGATGGTGG
CCAAGATGCACGACGCTCAGGTGGTGCACGGCGATCTGACAACGTCCAAT
TTTATGGTTCGGAGCGGTCCCGGAGAAGGAGACGTAGTGGCGATCGACTT
CGGCCTTGCTTCGTCGAAGCCACTCCCGGAGGACAAGGTGGTGCACGGCG
ATCTGACAACGTCCAATTTTATGGTTCGGAGCGGTCCCGGAGAAGGAGAC
GTAGTGGCGATCGACTTCGGCCTTGCTTCGTCGAAGCCACTCCCGGAGGA
CAAGGCGGTTGACCTGTACGTGCTGGAGAGGGCGTTCATTTCCACACACG
AAAATGCGGATCCCTTGGTGAACGAGGTCATGCGAGCTTACAAGGCGGTT
GACCTGTACGTGCTGGAGAGGGCGTTCATTTCCACACACGAAAATGCGGA
TCCCTTGGTGAACGAGGTCATGCGAGCTTACAAGGCGGCATCGCGCAAGG
CGGATGCGACGCTACACAAGCTATCCGAGGTTCGACGACGAGGGCGAAAG
CGAGAGATGTTTGGGTGAGCGGCATCGCGCAAGGCGGATGCGACGCTACA
CAAGCTATCCGAGGTTCGACGACGAGGGCGAAAGCGAGAGATGTTTGGGT
GA
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