mRNA_Ecto-sp9_F_contig89.17075.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig89.17075.1 vs.
Match: DNA-(apurinic (or apyrimidinic site) endonuclease n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ59_ECTSI) HSP 1 Score: 804 bits (2076), Expect = 1.260e-290 Identity = 439/461 (95.23%), Postives = 444/461 (96.31%), Query Frame = 1
Query: 244 MSASQEESQGMTTAAEESQDTPGDSLDDTQELKEXXXXXXXXXXXXXXXXXKAELPIFTKRDPIDRVPLPSTGTTFTVLSWNVNGVRATAKKGLEPLRRMVEKEMPDIVCLQETKIQDKDVEALRAQDILPGYASEWSCSRTKLGYSGTAVFFTKQSDPWKGDGGGIDSTGNGLPPDEPARKKLKQGKISTFFSPKPSKKSAKGSTPESETPTXXXXXXXXXXAAASTNSADSLPGGRSGFKVLSVRFGIGGDSKHNNEGRSITVEYEKFFVVTVYVPNSGEKLVRIDYRTKEWDVALKAYVESLEAQGKPVVLNGDLNVAHLDLDIYNRGAKHLPKNAATTKEERDSFDSWVNGGKVSDAFRRLHPDAEGAYTYWSVRTGARPINRGLRLDYFVCSNAVFEEGAAGGGQAKATARRAKGSAPKGKGATGAKGMVVHDCFMLDEATVGVSDHCPIGITLRS 1626
MSASQEESQGMTTAAEESQDTPGDS DDTQELK XXXXXXXXXXXXXXXXXKAELPIFTKRDPIDRVP PSTGTTFTVLSWNVNGVRATAKKGLEPLRRMVEKEMPDIVCLQETKIQ+KDVEALRAQDILPGYASEWSCSRTKLGYSGTAVFFTKQSDPWKGDGGGID+TGNGLP DEPARKKLKQGKISTFFSPKPSKKSA XXXXXXXXXX ASTNSADSLPGGRSGFKVLSVRFGIGGDSKHNNEGRSITVEYEKFFVVTVYVPNSGEKLVR+DYRTKEWDVALKAYVESLEAQGKPVVLNGDLNVAHLDLDIYNRGAKHLPKNAATTKEERDSFDSWVNGGKVSDAFRRLHPDAEGAYTYWSVRTGARP+NRGLRLDYFVCSNAVFE+GAAGGGQAKATARRAKGSAPKGKGATGAKGMVVHDCFMLDEATVGVSDHCPIGITLRS
Sbjct: 1 MSASQEESQGMTTAAEESQDTPGDSFDDTQELKXXXXXXXXXXXXXXXXXXKAELPIFTKRDPIDRVPFPSTGTTFTVLSWNVNGVRATAKKGLEPLRRMVEKEMPDIVCLQETKIQEKDVEALRAQDILPGYASEWSCSRTKLGYSGTAVFFTKQSDPWKGDGGGIDATGNGLPSDEPARKKLKQGKISTFFSPKPSKKSAXXXXXXXXXXXXXXXXXXXXXXXASTNSADSLPGGRSGFKVLSVRFGIGGDSKHNNEGRSITVEYEKFFVVTVYVPNSGEKLVRLDYRTKEWDVALKAYVESLEAQGKPVVLNGDLNVAHLDLDIYNRGAKHLPKNAATTKEERDSFDSWVNGGKVSDAFRRLHPDAEGAYTYWSVRTGARPVNRGLRLDYFVCSNAVFEDGAAGGGQAKATARRAKGSAPKGKGATGAKGMVVHDCFMLDEATVGVSDHCPIGITLRS 461
BLAST of mRNA_Ecto-sp9_F_contig89.17075.1 vs.
Match: DNA-(apurinic (or apyrimidinic site) endonuclease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNZ2_9STRA) HSP 1 Score: 313 bits (803), Expect = 2.910e-98 Identity = 186/422 (44.08%), Postives = 234/422 (55.45%), Query Frame = 1
Query: 418 TKRDPIDRVPLPSTGTT--FTVLSWNVNGVRATAKKGLEPLRRMVEKEMPDIVCLQETKIQDKDVEALRAQDILPGYASEWSCSRTKLGYSGTAVFFTKQSDPWKGDGGGIDSTGNGLPPDEPARKKL-----KQGKISTFFSPKPSKKSAKGSTPESETPTXXXXXXXXXXAAASTNS----ADSLPGGRSGFKVLSVRFGIGGDSKHNNEGRSITVEYEKFFVVTVYVPNSGEKLVRIDYRTKEWDVALKAYVESLEAQGKPVVLNGDLNVAHLDLDIYNRGAKHLPKNAATTKEERDSFDSWVNGGK---------VSDAFRRLHPDAEGAYTYWSVRTGARPINRGLRLDYFVCSNAVFEEGAAGGGQAKATARRAKGSAPKGKGATGAKGMVVHDCFMLDEATVGVSDHCPIGITLR 1623
T+RDP R P P F LSWNVNG+R T + E L + +E PD++CLQETK+Q+ V A +LPGY + WSCS K GYSGT VF K PP E AR KQ K++ FF KSA + AAA+ + A + G S KV+ VR GIG D+ H EGR+IT+EYEKFFVV +YVPNSG+ L R++YRT WD AL+A+V +LEA+GKPV++ GDLNVAHLDLDIYN GA HL K A T ER SFD+WVN V DAFR L+P A G YTYWS R R N+GLRLDYF+C+ ++ + + + +A A P ++ +VHD F D TVG+SDHCP+G+ LR
Sbjct: 57 TERDPTPRRPTPGFPGPRYFKALSWNVNGLRGTLRNAPEALSALAARERPDLLCLQETKLQEMHVADFAA--LLPGYDAHWSCSTKKKGYSGTVVFTAK-------------------PPAETARAAAENGSRKQAKLTAFFG-----KSASDAV-----------------AAAAKDDVAPEAGPIVTGGSAPKVVGVRHGIGADADHGGEGRAITIEYEKFFVVCLYVPNSGQSLERLEYRTTSWDPALRAFVAALEAEGKPVIVTGDLNVAHLDLDIYNAGAPHLKKQAGCTPAERASFDAWVNPAAAEAAPGAPHVRDAFRHLYPAARGCYTYWSARKAGRDTNKGLRLDYFLCTPSLLPK------EGQPSAEAAPAELPDSSESSSDTVPIVHDVFHDDITTVGLSDHCPVGLILR 429
BLAST of mRNA_Ecto-sp9_F_contig89.17075.1 vs.
Match: DNA-(apurinic (or apyrimidinic site) endonuclease (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QUM9_9CHLO) HSP 1 Score: 271 bits (694), Expect = 1.250e-82 Identity = 171/411 (41.61%), Postives = 221/411 (53.77%), Query Frame = 1
Query: 418 TKRDPIDRVPLPST-------GTTFTVLSWNVNGVRATAKKGLEPLRRMVEKEMPDIVCLQETKIQDKDVE--ALRAQDILPGYASEWSCSRTKLGYSGTAVFFTKQSDPWKGDGGGIDSTGNGLPPDEPARKKLKQGKISTFFSPKPSKKSAKGSTPESETPTXXXXXXXXXXAAASTNSADSLPGGRSGFKVLSVRFGIGGDSK-HNNEGRSITVEYEKFFVVTVYVPNSGEKLVRIDYRTKEWDVALKAYVESLEAQGKPVVLNGDLNVAHLDLDIYNRGAKHLPKNAATTKEERDSFDSWVNGGKVSDAFRRLHPDAEGAYTYWSVRTGARPINRGLRLDYFVCSNAVFEEGAAGGGQAKATARRAKGSAPKGKGATGAKGMVVHDCFMLDEATVGVSDHCPIGITL 1620
T++D RVP T G F +SWNVNG+RA K E L +VE E PD +CLQE K+Q +DV+ L+ + +LPGY S W+ + K GYSGT V + + +G P ++K Q I++FF K AK SE T G ++ V + + G++ H EGR ITVEYEKFFVV YVPNSG KL R++YRTK+WD L+AY+ +L A+ KP +L GDLNVAHLD+DIYN AKH+PK A TT EER SF + G V DAFR LH +G YT+WS R G R NRGLRLDY + S + +GA G +G +HDC++LD+ATVG SDHCP+ +TL
Sbjct: 49 TEQDEHGRVPRGETPRQQTPEGPYFKAISWNVNGLRALLSKNSEKLVSIVEAEKPDYICLQEHKLQVQDVDDAKLKLEKLLPGYTSFWNTATAKKGYSGTVVI--------------VRTPASGALPKGSSKK---QKGIASFF-----KGQAKAEAAPSEAGT--------------------------GLPIVGVTYDMDGEANLHKGEGRLITVEYEKFFVVGAYVPNSGMKLERLEYRTKQWDRDLQAYLGALGAR-KPTILTGDLNVAHLDIDIYNVAAKHVPKGACTTPEERASFGELLGAGFV-DAFRHLHAGVKGCYTFWSTRAGNRRTNRGLRLDYCLVSRELC------------------------RGAIG-EGPALHDCWILDDATVGASDHCPVAVTL 384
BLAST of mRNA_Ecto-sp9_F_contig89.17075.1 vs.
Match: DNA-(apurinic (or apyrimidinic site) endonuclease n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H8Q9_9STRA) HSP 1 Score: 249 bits (635), Expect = 8.100e-74 Identity = 157/406 (38.67%), Postives = 219/406 (53.94%), Query Frame = 1
Query: 424 RDPIDRVPLPSTGT-TFTVLSWNVNGVRATAKKGLEPLRRMVEKEMPDIVCLQETKIQDKDVEALRAQDILPGYASEWSCSRTKLGYSGTAVFFTKQS----DPWKGDGGGIDSTGNGLPPDEPARKKLKQGKISTFFSPKPSKKSAKGSTPESETPTXXXXXXXXXXAAASTNSADSLPGGRSGFKVLSVRFGIGGDSKH-NNEGRSITVEYEKFFVVTVYVPNSGEKLVRIDYRTKEWDVALKAYVESLEAQGKPVVLNGDLNVAHLDLDIYNRGAKHLPKNAATTKEERDSFDSWVNGGKVSDAFRRLHPDAEGAYTYWSVRTGARPINRGLRLDYFVCSNAVFEEGAAGGGQAKATARRAKGSAPKGKGATGAKGMVVHDCFMLDEATVGVSDHCPIGITLR 1623
R+ ++ P + G + ++SWNVNG+R+ A L +++++ PDI+CLQETKIQD + + L GY S W+CS K GYSGTAVF K + K G G G PP KQ K+S FF K PE + A +P G V V + + K N EGR+ITVE+ F +V YVPNSGE L R++YR +EW+ ++ Y++ L A+ KPVV GDLN HLDLDI+N AKH+PK + T ER +F + + DAFR +PDA+G +TYWSVR G RP N+G+RLDYF+CS +F A GG +AK T +G+ + ++ HD ++L + TVG SDHCP+ + ++
Sbjct: 32 RETLNPAPQLADGAISLKIVSWNVNGLRSLATTNKATLLNVIKEQKPDILCLQETKIQDNTIGDY--DNFLDGYESYWNCSTDKKGYSGTAVFLKKSTILINPSSKRSGSGPICVG---PP-------KKQAKLSAFF---------KKGLPE-----------PVVSEEELSQEAVVVPAGHVSV-VEQVSYDFEDEGKRFNGEGRTITVEFSNFILVACYVPNSGEDLKRLNYRVEEWEPHMRQYLKKLNAR-KPVVYTGDLNCGHLDLDIHNPTAKHIPKQSGLTVLERSAFTQMLQETQYRDAFRYFYPDAKGQFTYWSVRAGNRPYNKGIRLDYFICSPDMFSV-AEGGEEAKET----EGTRTR---------VLAHDSYILHKETVGCSDHCPVVLVVK 389
BLAST of mRNA_Ecto-sp9_F_contig89.17075.1 vs.
Match: DNA-(apurinic (or apyrimidinic site) endonuclease n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5N9_9STRA) HSP 1 Score: 235 bits (600), Expect = 6.010e-68 Identity = 161/429 (37.53%), Postives = 219/429 (51.05%), Query Frame = 1
Query: 403 ELPIFTKRDPIDRVPLPSTGTTFTVLSWNVNGVRA---------TAKKGLEPLRRMVEKE-MPDIVCLQETKIQDKDVEALRAQDILPGYASEWSCSRTKLGYSGTAVF---------FTKQSDPWKGDGGGIDSTGNGLPPDEPARKKLKQGKISTFFSPKPSKKSAKGSTPESETPTXXXXXXXXXXAAASTNSADS-LPGGRSG---FKVLSVRFGIGGDSKHNNEGRSITVEYEKFFVVTVYVPNSGEKLVRIDYRTKEWDVALKAYVESLEAQGKPVVLNGDLNVAHLDLDIYNRGAKHLPKNAATTKEERDSFDSWVNGGKVSDAFRRLHPDAEGAYTYWSVRTGARPINRGLRLDYFVCSNAVFEEGAAGGGQAKATARRAKGSAPKGKGATGAKGMVVHDCFMLDEATVGVSDHCPIGITL 1620
EL + T+RD + R LP +F VLSWNVNG+ KG L+++V++E D++ LQETK+QD A +D+LPGY + WSCS+TK GY+G A F + SD KG G KQ +++FF P K++ E A+S + D + G S +VLSVR G G+ + EGR +T+E+ F+VV VYV NSG KL R++YR K+W+ + +AY+ L A KP ++ GD+NVA D+YN GAKHL K T EER++ +W+ G D FR LHPDA GAYTYW+V+T AR N+GLRLD V A + G +G+ V D F+L EAT+G SDH PIG+ L
Sbjct: 72 ELVLQTERDLLARNSLPE--KSFKVLSWNVNGLNGILNGKAAQINGNKGSNVLQQLVQEEGNVDVIFLQETKLQDAKCAAF--EDVLPGYVAHWSCSKTKKGYAGVAAFVHEKYVKRCISSYSDANKGSSRG------------------KQATLASFF-PTKGKETEPTKGAEGRIAAMKTAACKSASMASSCSIKDKEIEDGDSSVEALQVLSVRRGCDGEDDEDEEGRVLTLEFGSFWVVGVYVTNSGMKLERLEYRLKQWNPSFQAYLARLNAV-KPALVVGDMNVAPEASDVYNAGAKHLAKVPGLTPEEREAHAAWLRTG-WKDTFRALHPDARGAYTYWNVKTRARAENKGLRLDLAVIGAADMD---------------------------GGRGVRVRDSFILHEATIGFSDHAPIGVVL 448
BLAST of mRNA_Ecto-sp9_F_contig89.17075.1 vs.
Match: DNA-(apurinic (or apyrimidinic site) endonuclease n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G0P7_9EUKA) HSP 1 Score: 234 bits (597), Expect = 1.080e-66 Identity = 156/421 (37.05%), Postives = 220/421 (52.26%), Query Frame = 1
Query: 397 KAELPIFTKRDPIDRVPLPSTGTTFTVLSWNVNGVRATAK--KGLEPLRRMVEKEMPDIVCLQETKIQDKDVEALRA--QDILPGYASEWSCSRTKLGYSGTAVFF-----TKQSDPWKGDGGGIDSTGNGLPPDEPARKKLKQGKISTFFSPKPSKKSAKGSTPESETPTXXXXXXXXXXAAASTNSADSLPGGRSG-FKVLSVRFG-IGGDSKHNNEGRSITVEYEKFFVVTVYVPNSGEKLVRIDYRTKEWDVALKAYVESLEAQGKPVVLNGDLNVAHLDLDIYNRGAKHLPKNAATTKEERDSFDSWVNGGKVSDAFRRLHPDAEGAYTYWSVRTGARPINRGLRLDYFVCSNAVFEEGAAGGGQAKATARRAKGSAPKGKGATGAK--GMVVHDCFMLDEATVGVSDHCPIGITL 1620
+AE P+F +R P+ R + F ++WNV G+RA + + +E RR+V+ E PD + +QE K+Q KDVE + + +PGY S W S K GYSG AVF SD D G + N P E KK KQ + F K + T+S ++ S ++ ++V I G S +EGR ITVEY F++V YVPNSG+ L R++YR W+ +L AY++ LE + KPV+L GDLNVAH D D+YN AKH+PK+A TT +ER +F ++ G++ D FR HPDA GA++YWS+R R +NRG+RLDYFV S + + A + + A K AT K G + D ++ E SDHCP+GI +
Sbjct: 129 QAERPMF-ERTPMTRKYKAGSEQAFVAVAWNVAGLRAVLRTPQRIESFRRLVDVEKPDYLLIQEHKLQGKDVEEIETALEPYIPGYESHWVSSTGKKGYSGVAVFLKYPVRNTPSDKQVADAGDGKNCANAKPNKE---KKGKQASLKDMFGIK---------------------KDVEQELVSETSSTKTMKNSDSQMYRAINVTMPKIEGAS---DEGRVITVEYPHFYMVGAYVPNSGQNLARLEYRIGGWNKSLNAYMKELE-KTKPVILGGDLNVAHTDQDVYNPEAKHIPKSAGTTPQERRAFSELLSDGEMVDTFRHYHPDARGAFSYWSMRVNNRVVNRGMRLDYFVASKILVDNTAKSSETTDQSTDATEKPALASKNATPYKTQGAQILDAWISPE--YNGSDHCPVGIAI 518
BLAST of mRNA_Ecto-sp9_F_contig89.17075.1 vs.
Match: DNA-(apurinic (or apyrimidinic site) endonuclease n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y255_9STRA) HSP 1 Score: 226 bits (577), Expect = 7.140e-66 Identity = 143/409 (34.96%), Postives = 210/409 (51.34%), Query Frame = 1
Query: 412 IFTKRDPIDRV----PLPSTGTTFTVLSWNVNGVRATAKKGLEPLRRMVEKEMPDIVCLQETKIQDKDVEALRAQDILPGYASEWSCSRTKLGYSGTAVFFTKQSDPWKGDGGGIDSTGNGLPPDEPARKKLKQGKISTFFSPKPSKKSAKGSTPESETPTXXXXXXXXXXAAASTNSADSLPGGRSGFKVLSVRFGIGGDSKHNNEGRSITVEYEKFFVVTVYVPNSGEKLVRIDYRTKEWDVALKAYVESL-EAQGKPVVLNGDLNVAHLDLDIYNRGAKHLPKNAATTKEERDSFDSWVNGGKVSDAFRRLHPDAEGAYTYWSVRTGARPINRGLRLDYFVCSNAVFEEGAAGGGQAKATARRAKGSAPKGKGATGAKGMVVHDCFMLDEATVGVSDHCPIGITLR 1623
+ T++DP+ ++ P T T + SWNV G+RA KK L +V++ D++CLQETK+Q++ VE + + GY + +SCS K GYSGTAVF +S ++ K KQ + FF GS+ +S+T T + N S + SV + IG +H+ EGR + V++ F + VYVPN+G+ L R++YR +EWD +++++ E +G PV+ GDLN+AH +L+++N GAKHLPK A T EER SF + + G V D FRRLHP A+G Y+YWS+R G R N+GLRLDYF+C A F+E + +V D +ML + SDHCP+ + L
Sbjct: 4 VLTEKDPLVKLWNAAEAPETSYTMKIASWNVAGLRAVLKKSPTALSDLVQEHDLDVLCLQETKLQEQHVEDPKINTSIEGYQAYYSCSTEKKGYSGTAVFVRDKSSS--------------------SKTKKKQATMDQFF----------GSSSQSKTKT-------------TNNEKVSSAFDETLLIPQSVSYEIGAP-QHDAEGRVVVVDFPTFSLCNVYVPNAGQGLKRLEYRVQEWDQDFLSFMQTKKEDRGVPVLWLGDLNIAHTNLEVWNDGAKHLPKQAGVTPEERASFTAQLEAGFV-DVFRRLHPTAKGHYSYWSMRAGNREPNKGLRLDYFICDEAAFDENSK---------------------------VVPRDSYMLSDQQG--SDHCPVVLELE 338
BLAST of mRNA_Ecto-sp9_F_contig89.17075.1 vs.
Match: DNA-(apurinic (or apyrimidinic site) endonuclease n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2VFC3_9STRA) HSP 1 Score: 233 bits (594), Expect = 8.820e-66 Identity = 156/415 (37.59%), Postives = 216/415 (52.05%), Query Frame = 1
Query: 415 FTKRDPIDRVPLPSTGTT------FTVLSWNVNGVRATAKKGLEPLRRMVEKEMPDIVCLQETKIQDKDVEALRA------QDILPGYASEWSCSRTKLGYSGTAVFFTKQSDPWKGDGGGIDSTGNGLPPDEPARKKLKQGKISTFFSPKPSKKSAKGSTPESETPTXXXXXXXXXXAAASTNSADSLPGGRSGFKVLSVRFGIGGDSKHNNEGRSITVEYEKFFVVTVYVPNSGEKLVRIDYRTKEWDVALKAYVESLEAQGKPVVLNGDLNVAHLDLDIYNRGAKHLPKNAATTKEERDSFDSWVNGGKVSDAFRRLHPDAEGAYTYWSVRTGARPINRGLRLDYFVCSNAVFEEGAAGGGQAKATARRAKGSAPKGKGATGAKGMVVHDCFMLDEATVGVSDHCPIGITLR 1623
+T+R P+ R+ P T T FTV+SWNV G+RA KK + L + E+ D++CLQE K+QD ++ + ++ L G+ S WS S TK GYSGTA+F K+ GGG D+ ++K KQ KI FF+ K A +S +P S + L+V +G KH+ EGR++T E+ F + VYVPNSG+KL R+ YRT+EWD ++ LE +GKPV+ GDLNVAH + D +N GAKHL K+A TT +ER SFD + G V DAFR LH DA G Y+YWS R G R N+GLRLDYF+CS + E+ + +VV D +++ + +G SDHCPI + +
Sbjct: 231 WTERMPLTRLWNPETAMTSKGSYTFTVISWNVAGLRAFIKKQPDALANLAERYQADVICLQEHKLQDVHLDDPKLKIREHFEEKLGGFESHWSYSTTKKGYSGTAMFIRKR-------GGG----------DDASKKGKKQAKIGAFFTSK----------------------NKEGDEATKGDSIGDIP--VSHLQPLNVMTELG-LPKHDGEGRTVTAEFPLFHLTNVYVPNSGQKLDRLGYRTEEWDTDFLNKMQQLE-KGKPVIWLGDLNVAHNEKDTWNEGAKHLVKSAGTTPQERASFDRQLGAGFV-DAFRHLHQDAMGHYSYWSQRAGNREPNKGLRLDYFICSKDLMED-------------------------DDDRKVVVRDSYIVPDQ-LG-SDHCPIVLEIE 574
BLAST of mRNA_Ecto-sp9_F_contig89.17075.1 vs.
Match: DNA-(apurinic (or apyrimidinic site) endonuclease (Fragment) n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UXM6_MONBE) HSP 1 Score: 215 bits (548), Expect = 1.220e-62 Identity = 132/325 (40.62%), Postives = 171/325 (52.62%), Query Frame = 1
Query: 475 VLSWNVNGVRATAKKGLEPLRRMVEKEMPDIVCLQETKIQDKDVEALRAQDILPGYASEWSCSRTKLGYSGTAVFFTKQSDPWKGDGGGIDSTGNGLPPDEPARKKLKQGKISTFFSPKPSKKSAKGSTPESETPTXXXXXXXXXXAAASTNSADSLPGGRSGFKVLSVRFGIGGDSKHNNEGRSITVEYEKFFVVTVYVPNSGEKLVRIDYRTKEWDVALKAYVESLEAQGKPVVLNGDLNVAHLDLDIYNRGAKHLPKNAATTKEERDSFDSWVNGGKVSDAFRRLHPDAEGAYTYWSVRTGARPINRGLRLDYFVCSNAVFE 1449
V+SWNVNG+RA K + L +V+ E PD++ LQETK+Q V ++LPGY WSCSR K GYSGTA G+TP S+ F+ LSV++GI + H+ EGR+ITVE FV+ VYVPNSG+ L R+DYR EW+V AY+ LEA KPV++ GDLNVAHLDLDIYN G HL K+A T +ER +F +++ G +D FR+L+P+ GA+TYWS RTG R ++GLRLDY VCSNA+ E
Sbjct: 3 VVSWNVNGLRAVLKNHPKALPDLVQAENPDLLFLQETKLQASHVADYA--NLLPGYTGLWSCSRAKKGYSGTA-----------------------------------------------------GATPTSD------------------------------FRALSVQYGIK-SAHHDQEGRTITVELPDLFVIGVYVPNSGQDLKRLDYRLNEWNVDFLAYIRELEAS-KPVLVVGDLNVAHLDLDIYNAG--HLVKSAGCTPQERTAFTEFLDQG-FTDTFRKLYPEHTGAFTYWSARTGGRQDSKGLRLDYAVCSNALLE 237
BLAST of mRNA_Ecto-sp9_F_contig89.17075.1 vs.
Match: DNA-(apurinic (or apyrimidinic site) endonuclease n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JZE2_GUITC) HSP 1 Score: 220 bits (560), Expect = 3.740e-62 Identity = 143/360 (39.72%), Postives = 191/360 (53.06%), Query Frame = 1
Query: 421 KRDPIDRVPLPSTGTTFTVLSWNVNGVRATAKKGLEPLRRMVEKEMPDIVCLQETKIQ----DKDVEALRAQDILPG---YASEWSCSRTKLGYSGTAVFFTKQSDPWKGDGGGIDSTGNGLPPDEPARKKLKQGKISTFFSPKPSKKSAKGSTPESETPTXXXXXXXXXXAAASTNSADSLPGGRSGFKVLSVRFGIGGDSKHNNE--------GRSITVEYEKFFVVTVYVPNSGEKLVRIDYRTKEWDVALKAYVESLEAQGKPVVLNGDLNVAHLDLDIYNRGAKHLPKNAATTKEERDSFDSWVNGGKVSDAFRRLH-PDAEGAYTYWSVRTGARPINRGLRLDYFVCSNAVFEE 1452
++ I LPS + ++SWNV +R+ KK E L++++E+E PD++C QETK++ D+ E L++Q PG Y + +S S + Y+GT V D KQ K+ +FF K SK +A + + P L V FG+ SK + E GR+ITVE+E FFVV YVPNSGEKL R+++RTK WD + Y++ LEA GKPV+ GDLNVAHLD DI+N GAKHL K+A TT EERDSF + G V D FR LH DA+G ++YWSVR G RP NRGLRLDYFV S ++ +
Sbjct: 117 EKSDIKHAELPS--KRYKIVSWNVTTIRSLMKKNPELLKKLMEQEQPDLICFQETKLKQEEHDEYEEMLKSQ--FPGDQGYEAHFSSSLSNKSYAGTLVLVRSSKDKATAQ---------------------KQTKMDSFFKGKDSK-------------------------SAKKDEETACP-------PLKVTFGLSTLSKDDGEIAAEVIQEGRTITVEFESFFVVATYVPNSGEKLQRLEFRTKLWDRKVVEYLKKLEASGKPVIWCGDLNVAHLDNDIWNVGAKHLVKSAGTTPEERDSFSKILEEGYV-DCFRHLHGEDAKGWFSYWSVRAGNRPWNRGLRLDYFVASKSLCSQ 418 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig89.17075.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig89.17075.1 >prot_Ecto-sp9_F_contig89.17075.1 ID=prot_Ecto-sp9_F_contig89.17075.1|Name=mRNA_Ecto-sp9_F_contig89.17075.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=544bp VECIKSRVCACSGAGSERRETRDRAKPSESTSQAYSINTCCRSGFRWTRVback to top mRNA from alignment at Ecto-sp9_F_contig89:3404..7095- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig89.17075.1 ID=mRNA_Ecto-sp9_F_contig89.17075.1|Name=mRNA_Ecto-sp9_F_contig89.17075.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3692bp|location=Sequence derived from alignment at Ecto-sp9_F_contig89:3404..7095- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig89:3404..7095- >mRNA_Ecto-sp9_F_contig89.17075.1 ID=mRNA_Ecto-sp9_F_contig89.17075.1|Name=mRNA_Ecto-sp9_F_contig89.17075.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=3264bp|location=Sequence derived from alignment at Ecto-sp9_F_contig89:3404..7095- (Ectocarpus species9 EcSCA_722f female)back to top |