mRNA_Ecto-sp9_F_contig8899.17074.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig8899.17074.1
Unique NamemRNA_Ecto-sp9_F_contig8899.17074.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig8899.17074.1 vs.
Match: Carboxypeptidase ((Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQG6_ECTSI)

HSP 1 Score: 981 bits (2537), Expect = 0.000e+0
Identity = 538/585 (91.97%), Postives = 544/585 (92.99%), Query Frame = 1
Query:    1 QVDEQFYLFLSNFLELHSRFKAGSGKSRPIFFTGESHAGHYIPSMTAYILAKNEAAGEGELVVDVQGMMIGNGWFDPVSQYDVSDFAFGMGLIDSGQRRGLKKQEESCLSSIEAGNYNDHGCLGLMDSVIAASNARKVGVPRVSMYDVRDYELGRQFPPGHATVEAYLNRKDVRAAIHASSCPIKFQECTDQPFVHLSKWDGLGVTKELRSILNAGVRSLFFNGQYDLICNHVGNLKALERLGDWTGDKEWESARRGVWLSDDKGKGHGGHRRPIGYVKEKRGNPLTFLLVLNSGHMVPLDQPRAALDMLKRFLSGDAFSDGEQTLVSVGPCDPGDEDCDDAGLPADFHPAVALVPGTGXXXXXXXXXXXXX--RVVGTPVVRRDSAVVEFVPGDXXXXXXXXXXXXXXXXXXXXXX---VVLFEARSSPDGLVGTSPTSPVVVEGLTPGRTYTFAVTAVHAEAGAAAGEGGGARSVPSVGSPAVTPGCGQD-GGGACGGHGACREGGHEGVCVCENGYGGDVCDVLLVAGXXXXXXXXXXXX----GSFVGPDGYAGDIKLLLEEDIPVLKSTGTTVCFRRGVG 1725
            QVDEQFYLFLSNFLELHSRFKAGSGKSRPIFFTGESHAGHYIPSMTAYILAKNEAAGEGELVVDVQGMMIGNGWFDPVSQYDVSDFAFGMGLIDSGQRRGLKKQEESCLS IEAGNYNDHGCLGLMDSVIAASNARKVGVPRVSMYDVRDYELGRQFPPGHATVEAYLNRKDVRAAIHASSCPIKFQECTDQPFVHLSKWDGLGVTKELRSILNAGVRSLFFNGQYDLICNHVGNLKALERLGDWTGDKEWESARRGVWLSDD  KGHGGHRRPIGYVKEKRGNPLTFLLVLNSGHMVPLDQPRAALDMLKRFLSGDAFSDGEQ L SVG CDP DEDCDDAGLPAD HPAVALVPGTG   XXXXXX      R+VGTP+VRRDSAVVEF PGD      XXXXXXXXXXXXXXXX   VVLFEARSSPDGLVGT PTSPVVVEGLTPGRTYTFAVTAV+AEAGAAAGEGGGARSVPSVGSPAVTPGCG+D GGGACGGHGACREGGHEG+CVCENGYGGDVCDVLL   XXXXXXXXXXXX    GSFVGPDGY GDIKLLLEEDIP+LKSTGTT C   GVG
Sbjct:  176 QVDEQFYLFLSNFLELHSRFKAGSGKSRPIFFTGESHAGHYIPSMTAYILAKNEAAGEGELVVDVQGMMIGNGWFDPVSQYDVSDFAFGMGLIDSGQRRGLKKQEESCLSLIEAGNYNDHGCLGLMDSVIAASNARKVGVPRVSMYDVRDYELGRQFPPGHATVEAYLNRKDVRAAIHASSCPIKFQECTDQPFVHLSKWDGLGVTKELRSILNAGVRSLFFNGQYDLICNHVGNLKALERLGDWTGDKEWESARRGVWLSDDNEKGHGGHRRPIGYVKEKRGNPLTFLLVLNSGHMVPLDQPRAALDMLKRFLSGDAFSDGEQALASVGRCDPSDEDCDDAGLPADSHPAVALVPGTGGGSXXXXXXATPPAPRIVGTPLVRRDSAVVEFAPGDEQDGAGXXXXXXXXXXXXXXXXXXXVVLFEARSSPDGLVGTGPTSPVVVEGLTPGRTYTFAVTAVYAEAGAAAGEGGGARSVPSVGSPAVTPGCGEDDGGGACGGHGACREGGHEGICVCENGYGGDVCDVLLAXXXXXXXXXXXXXXXXXXGSFVGPDGYVGDIKLLLEEDIPMLKSTGTTKCNGCGVG 760          
BLAST of mRNA_Ecto-sp9_F_contig8899.17074.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6E8_9PHAE)

HSP 1 Score: 565 bits (1456), Expect = 4.940e-196
Identity = 273/279 (97.85%), Postives = 275/279 (98.57%), Query Frame = 1
Query:    1 QVDEQFYLFLSNFLELHSRFKAGSGKSRPIFFTGESHAGHYIPSMTAYILAKNEAAGEGELVVDVQGMMIGNGWFDPVSQYDVSDFAFGMGLIDSGQRRGLKKQEESCLSSIEAGNYNDHGCLGLMDSVIAASNARKVGVPRVSMYDVRDYELGRQFPPGHATVEAYLNRKDVRAAIHASSCPIKFQECTDQPFVHLSKWDGLGVTKELRSILNAGVRSLFFNGQYDLICNHVGNLKALERLGDWTGDKEWESARRGVWLSDDKGKGHGGHRRPIGYVK 837
            QVDEQFYLFLSNFLELHSRFKAGSGKSRPIFFTGESHAGHYIPSMTAYILAKNEAAGEGELVVDVQGMMIGNGWFDPVSQYDVSDFAFGMGLIDSGQRRGLKKQEESCLSSIEAGNYNDHGCLGLMDSVIAASNA KVGVPRVSMYDVR+YELGRQFPPGHATVEAYLNRKDVRAAIHASSCPIKFQECTDQPF HLSKWDGLGVTKELRSILNAGVRSLFFNGQYDLICNHVGNLKALERLGDWTGDKEW+SARRGVWLSDDK K HGGHRRPIGYVK
Sbjct:  174 QVDEQFYLFLSNFLELHSRFKAGSGKSRPIFFTGESHAGHYIPSMTAYILAKNEAAGEGELVVDVQGMMIGNGWFDPVSQYDVSDFAFGMGLIDSGQRRGLKKQEESCLSSIEAGNYNDHGCLGLMDSVIAASNAGKVGVPRVSMYDVRNYELGRQFPPGHATVEAYLNRKDVRAAIHASSCPIKFQECTDQPFFHLSKWDGLGVTKELRSILNAGVRSLFFNGQYDLICNHVGNLKALERLGDWTGDKEWKSARRGVWLSDDKEKRHGGHRRPIGYVK 452          
BLAST of mRNA_Ecto-sp9_F_contig8899.17074.1 vs.
Match: EGF-like (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBT7_9PHAE)

HSP 1 Score: 382 bits (982), Expect = 4.410e-123
Identity = 243/284 (85.56%), Postives = 248/284 (87.32%), Query Frame = 1
Query:  889 MVPLDQPRAALDMLKRFLSGDAFSDGEQTLVSVGPCDPGDEDCDDAGLPADFHPAVALVPGTGXXXXXXXXXXXXX---RVVGTPVVRRDSAVVEFVPGDXXXXXXXXXXXXXXXXXXXXXX-VVLFEARSSPDGLVGTSPTSPVVVEGLTPGRTYTFAVTAVHAEAGAAAGEGGGARSVPSVGSPAVTPGCGQDGGGACGGHGACREGGHEGVCVCENGYGGDVCDVLLVAGXXXXXXXXXXXX-GSFVGPDGYAGDIKLLLEEDIPVLKSTGTTVCFRRGVG 1725
            MVPLDQPRAALDMLKRFLSGDAFSDGEQTLVSVGPC PGDEDCDDA LPADFHPAVALVPGTGXXXXXXXXXXXX    RVVGTPVVRRDSAVVEFVPGD             XXXXXX    VVLFE RSSPDGLVGT PTSPVVVEGLTPGRTYTFAVTAV+AEAGAAAGEGGGARSVPSVGSPAVTPGCGQDGGGACGG G+CREGGHEG+CVCENGYGGDVCDVLL   XXXXXXXXXXXX GSFVGPDGYAGDIKLLLE+DIP+LKST  T C   GVG
Sbjct:    1 MVPLDQPRAALDMLKRFLSGDAFSDGEQTLVSVGPCHPGDEDCDDAELPADFHPAVALVPGTGXXXXXXXXXXXXPPAPRVVGTPVVRRDSAVVEFVPGDEQDGAGGASLAATXXXXXXGEAAVVLFEVRSSPDGLVGTGPTSPVVVEGLTPGRTYTFAVTAVYAEAGAAAGEGGGARSVPSVGSPAVTPGCGQDGGGACGGRGSCREGGHEGICVCENGYGGDVCDVLLAXXXXXXXXXXXXXXXGSFVGPDGYAGDIKLLLEDDIPMLKSTAAT-CNGCGVG 283          
BLAST of mRNA_Ecto-sp9_F_contig8899.17074.1 vs.
Match: Alpha/Beta (hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ65_9STRA)

HSP 1 Score: 305 bits (782), Expect = 5.410e-94
Identity = 159/324 (49.07%), Postives = 206/324 (63.58%), Query Frame = 1
Query:    1 QVDEQFYLFLSNFLELHSRFKAGSGKSRPIFFTGESHAGHYIPSMTAYILAKNEAAGEGELVVDVQGMMIGNGWFDPVSQYDVSDFAFGMGLIDSGQRRGLKKQEESCLSSIEAGNYNDHGCLGLMDSVIAASNARKVGVPRVSMYDVRDYELGRQFPPGHATVEAYLNRKDVRAAIHASSCPIKFQECTDQPFVHLSKWDGLGVTKELRSILNAGVRSLFFNGQYDLICNHVGNLKALERLGDWTGDKEWESARRGVWLSDDKGKGHGGHRRPIGYVKEKRGNPLTFLLVLNSGHMVPLDQPRAALDMLKRFLSGDAFSDGEQ 972
            QVD  FY FL  F+ LH      S  SR ++FTGESHAGHYIPSM  YIL  N   G   +V++V+G  IGNGW  P  QYDVS++AFG GL+  GQ R L+ +  +C ++I+  NY  + C  L+D+V+ AS  +     R  +YDVR +  G  FPPG   V+ YLNR DVRAA+H +  P +F+ECTD PF HL++WDGLGV  ++ SIL AG R LFFNGQ+DLICNHVGN + L  L  W+G + +  + RG W+ +      G    P GY K+   N L +LLV  +GHMVP+D P+AALDML RFL+  +F D  Q
Sbjct:  183 QVDANFYAFLQGFMALHP-----SLASRALYFTGESHAGHYIPSMIVYILDANAPGGSSAVVLNVKGAAIGNGWTAPRYQYDVSEYAFGAGLVAEGQLRALQARAAACRANIDKKNYRSNVCYELLDAVVEASGPQG---KRACIYDVRRF--GYDFPPGRDAVQDYLNRADVRAALHVADDPAQFKECTDPPFYHLAQWDGLGVMPQVASILEAGQRLLFFNGQHDLICNHVGNERWLSELS-WSGAQAYRESDRGAWVVES-----GDIEGPAGYYKKSANNGLAYLLVRGAGHMVPMDVPKAALDMLTRFLNEKSFVDYAQ 490          
BLAST of mRNA_Ecto-sp9_F_contig8899.17074.1 vs.
Match: Pheromone (processing carboxypeptidase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5F9_9STRA)

HSP 1 Score: 299 bits (766), Expect = 1.230e-86
Identity = 156/330 (47.27%), Postives = 208/330 (63.03%), Query Frame = 1
Query:    4 VDEQFYLFLSNFLELHSRFKAGSG---KSRPIFFTGESHAGHYIPSMTAYILAKNEAAGEGELVVDVQGMMIGNGWFDPVSQYDVSDFAFGMGLIDSGQRRGLKKQEESCLSSIEAGNYNDHGCLGLMDSVIAASNARKVGVPRVSMYDVRDYEL--GRQFPPGHATVEAYLNRKDVRAAIHASSCPIKFQECTDQPFVHLSKWDGLGVTKELRSILNAGVRSLFFNGQYDLICNHVGNLKALERLGDWTGDKEWESARRGVWLSDDKGKGHGGHRRPIGYVKEKRGNPLTFLLVLNSGHMVPLDQPRAALDMLKRFLSGDAFSDGEQTL 978
            +++  Y FL  F +LH      +G   K++PIFF+GES AGHYIPSM  YI+ +N  A   E+V+DVQGM IGNGWFDP +QYDVSD+A G GLI  GQ   L+K+ + C S +  G Y    C  L+D V+ ++   + G   VS YD R Y+    R FPPGH T E Y+N   V+ A+HA   P++FQECTD P+  L   DGLGVT+++  IL  GVR+LFFNG +D+ICNH+GN  AL+ L  W+G   +  ARR VW+ +  G G  G  +P G+ K      LT+L+V  +GHMVPLD P AALDM+ RF++  +F D  Q +
Sbjct:  182 INKHMYSFLQAFAKLHKDLVLPTGTEIKTKPIFFSGESQAGHYIPSMVDYIMQQNPKAASPEVVLDVQGMAIGNGWFDPPNQYDVSDYAHGAGLISEGQYHTLQKKRQECNSLLAQGKYYTPICFALLDLVVGSTGTDQTGF--VSFYDYRKYDHPGDRVFPPGHRTAEQYMNLPQVKEALHAGESPLRFQECTDPPYDALKHQDGLGVTEQVGRILEGGVRALFFNGAFDVICNHMGNEAALQAL-KWSGQDAFHEARRAVWIPE--GGGAAGEGKPGGFAKSS--GALTYLVVAGAGHMVPLDVPVAALDMMTRFVNLKSFDDKLQGI 504          
BLAST of mRNA_Ecto-sp9_F_contig8899.17074.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UA44_9STRA)

HSP 1 Score: 277 bits (708), Expect = 2.830e-79
Identity = 194/535 (36.26%), Postives = 256/535 (47.85%), Query Frame = 1
Query:    4 VDEQFYLFLSNFLELHSRFKAGSGKSRPIFFTGESHAGHYIPSMTAYILAKNEAAGEGELVVDVQGMMIGNGWFDPVSQYDVSDFAFGMGLIDSGQRRGLKKQEESCLSSIEAGNYNDHGCLGLMDSVIAASNARKVGVPRVSMYDVRDYELGRQFPPGHATVEAYLNRKDVRAAIHASSCPIKFQECTDQPFVHLSKWDGLGVTKELRSILNAGVRSLFFNGQYDLICNHVGNLKALERLGDWTGDKEWESARRGVWLSDDKGKGHGGHRRPIGYVKEKRGNPLTFLLVLNSGHMVPLDQPRAALDMLKRFLSGDAFSDGEQTLVSVGPCDPGDEDCDDAGLPADFHPAVALVPGTGXXXXXXXXXXXXXRVVGTPVVRRDSAVVEF--VPGDXXXXXXXXXXXXXXXXXXXXXXVVLFEARSSPDGLVGTSPTSPVVVEGLTPGRTYTFAVTAVHAEAGAAAGEGGGARSVPSVGSPAVTPGCGQDGGGA------------CGGHGACREGGHEGV--CVCENGYGGDVCDV 1560
            + + FY+FL   L LH   +      R I+F+GESHAGHYIP M  YI+ + +A    +  ++V G  IGNGW DP  QY V+D+A+  G+I   Q   L   E+SC +S+ A  Y+   C  LMD ++ ASN  +   P V  YD R YE    FPP    VE YLN  DVR+A+H SS P  F EC ++P+  L   DGLGVT EL  +L+AGVR LF++G +D+ICN++G  K L +L +W  D EW  A R VW+ D          +P GYVK    N L FL+VL++GHMVP+DQP+ +LDM+ RF+ G +F D  Q        D    D ++   P    PA  L+P                   G+ +    SA+V F  VPG                          +   S PD L       P  V  L  G  Y+F V AV           GG  S PSV +  V PGC  + G              C G G C      GV  C C  G+ G  C++
Sbjct:  185 IAKDFYVFLQELLTLHEGLQG-----RDIYFSGESHAGHYIPYMIDYIITR-QAGDRDDHDLNVVGAAIGNGWTDPYHQYAVTDYAWSRGIIGVQQIPTLNVLEDSCQASLRAQRYSSPACFDLMDKIVDASNPGRSAEP-VLYYDTRVYESSASFPPDKQRVETYLNNGDVRSALHVSSTPQAFVECANKPYNKLKYHDGLGVTDELVRVLDAGVRVLFYSGIHDMICNYMGTEKLLHQL-EWQHDSEWRKADRHVWMGDA--------GKPWGYVKS--ANNLQFLIVLDAGHMVPMDQPKPSLDMINRFIEGRSFQDKHQEAYVPTTKDLPHRDGEEEPGP----PAAPLLPS------------------GSVIAFNSSALVHFTEVPGAES-----------------------YLVTSIPDLLEVPVEAPPARVRHLRHGIPYSFRVRAVA----------GGQMSEPSVATSPVVPGCAFEEGAPEDDPEEDNYVSYCCGRGVCGRSEESGVVGCFCSEGFSGAHCEI 646          
BLAST of mRNA_Ecto-sp9_F_contig8899.17074.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UAB9_9STRA)

HSP 1 Score: 270 bits (691), Expect = 4.870e-79
Identity = 182/485 (37.53%), Postives = 240/485 (49.48%), Query Frame = 1
Query:    4 VDEQFYLFLSNFLELHSRFKAGSGKSRPIFFTGESHAGHYIPSMTAYILAKNEAAGEGELVVDVQGMMIGNGWFDPVSQYDVSDFAFGMGLIDSGQRRGLKKQEESCLSSIEAGNYNDHGCLGLMDSVIAASNARKVGVPRVSMYDVRDYELGRQFPPGHATVEAYLNRKDVRAAIHASSCPIKFQECTDQPFVHLSKWDGLGVTKELRSILNAGVRSLFFNGQYDLICNHVGNLKALERLGDWTGDKEWESARRGVWLSDDKGKGHGGHRRPIGYVKEKRGNPLTFLLVLNSGHMVPLDQPRAALDMLKRFLSGDAFSDGEQTLVSVGPCDPGDEDCDDAGLPADFHPAVALVPGTGXXXXXXXXXXXXXRVVGTPVVRRDSAVVEF--VPGDXXXXXXXXXXXXXXXXXXXXXXVVLFEARSSPDGLVGTSPTSPVVVEGLTPGRTYTFAVTAVHAEAGAAAGEGGGARSVPSVGSPAVTPGC 1452
            + + FY+FL   L LH   +      R I+F+GESHAGHYIP M  YI+ + +A    +  ++V G  IGNGW DP  QY V+D+A+  G+I   Q   L   E+SC +S+ A  Y+   C  LMD ++ ASN  +   P V  YD R YE    FPP    VE YLN  DVR+A+H SS P  F EC ++P+  L   DGLGVT EL  +L+AGVR LF++G +D+ICN++G  K L +L +W  D EW  A R VW+ D          +P GYVK    N L FL+VL++GHMVP+DQP+ +LDM+ RF+ G +F D  Q        D    D ++   P    PA  L+P                   G+ +    SA+V F  VPG                          +   S PD L       P  V  L  G  Y+F V AV           GG  S PSV +  V PGC
Sbjct:  185 IAKDFYVFLQELLTLHEGLQG-----RDIYFSGESHAGHYIPYMIDYIITR-QAGDRDDHDLNVVGAAIGNGWTDPYHQYAVTDYAWSRGIIGVQQIPTLNVLEDSCQASLRAQRYSSPACFDLMDKIVDASNPGRSAEP-VLYYDTRVYESSASFPPDKQRVETYLNNGDVRSALHVSSTPQAFVECANKPYNKLKYHDGLGVTDELVRVLDAGVRVLFYSGIHDMICNYMGTEKLLHQL-EWQHDSEWRKADRHVWMGDA--------GKPWGYVKS--ANNLQFLIVLDAGHMVPMDQPKPSLDMINRFIEGRSFQDKHQEAYVPTTKDLPHRDGEEEPGP----PAAPLLPS------------------GSVIAFNSSALVHFTEVPGAES-----------------------YLVTSIPDLLEVPVEAPPARVRHLRHGIPYSFRVRAVA----------GGQMSEPSVATSPVVPGC 596          
BLAST of mRNA_Ecto-sp9_F_contig8899.17074.1 vs.
Match: Alpha/beta-hydrolase (n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F2Z1_9STRA)

HSP 1 Score: 258 bits (660), Expect = 1.770e-74
Identity = 158/370 (42.70%), Postives = 212/370 (57.30%), Query Frame = 1
Query:    1 QVDEQFYLFLSNFLELHS-RFKAGS-GKS-------RPIFFTGESHAGHYIPSMTAYILAKN--------EAAGEGELVVDVQGMMIGNGWFDPVSQYDVSDFAFGMGLIDSGQRRGLKKQEESCLSSIEAGNYNDHGCLGLMDSVIAASNARKVGVP-RVSMYDVRDYEL----GRQFPPGHATVEAYLNR---------KDVRAAIHAS---SCPIKFQECTDQPFVHLSKWDGLGVTKELRSILNAG-----VRSLFFNGQYDLICNHVGNLKALERLGDWTGDKEWESARRGVWLSDDKGKGHGGHRRPIGYVKEKRGNPLTFLLVLNSGHMVPLDQPRAALDMLKRFLSGDAFSDGEQTLVSVGP 993
            +V+  FY FL+ F++LHS +F     GK+       RP++F+GESHAGHYIPSM  YI  KN        +   +  +++ + G +IGNGWFDP+ QY   + A+G GLI  GQ R L K+EE+C + ++AG Y    C  L+D VI+ S     G P +VS YD R +E      R+FPPGH  VEAYL +         +DV  AIHA        +++ECTD P+  LS  DGLGVT+++  +LN       ++ LFFNG +DLICNHVGN  ALE L +W    E+++A R  W S    K         GY+KE     L FL VLNSGHMVP+D P  ALDML+ F+   +F   +Q L +V P
Sbjct:  180 KVNIDFYYFLTEFMKLHSDKFTDTEVGKTPITTTLQRPLYFSGESHAGHYIPSMMNYIRKKNIDIKKKPSKKNNQDSIIMPLTGALIGNGWFDPIYQYSAHEAAYGYGLIGKGQERALAKKEETCRTDLKAGTYTSRTCFSLLDDVISNSLGNGGGAPYKVSQYDQRKWESKRGGSREFPPGHKDVEAYLGKTEKISNAPIEDVLNAIHAMPSWESGQRYRECTDPPYNALSHQDGLGVTQDIIELLNDTDEDDKIQLLFFNGVHDLICNHVGNENALENL-EWNYQNEYQTASRYGWKSSSIDK-------LGGYIKEHEN--LYFLKVLNSGHMVPMDVPGVALDMLETFIYKQSFQTYKQDLNAVKP 539          
BLAST of mRNA_Ecto-sp9_F_contig8899.17074.1 vs.
Match: Hypothetical (protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BA32_9STRA)

HSP 1 Score: 252 bits (644), Expect = 2.010e-72
Identity = 155/354 (43.79%), Postives = 197/354 (55.65%), Query Frame = 1
Query:    1 QVDEQFYLFLSNFLELHSRFKAGSGKS------RPIFFTGESHAGHYIPSMTAYILAKNEAAGEGELVVDVQGMMIGNGWFDPVSQYDVSDFAFGMGLIDSGQRRGLKKQEESCLSSIEAGNYNDHGCLGLMDSVIAASNARKVGVPRVSMYDVRDYELGRQFPPGHATVEAYLN----------RKDVRAAIHASS---CPIKFQECTDQPFVHLSKWDGLGVTKELRSILNAGVRSLFFNGQYDLICNHVGNLKALERLGDWTGDKEWESARRGVWLS------DDKGKGHGGHRRPIGYVKEKRGNPLTFLLVLNSGHMVPLDQPRAALDMLKRFLSGDAFSDGEQTLVSV 987
            QVD  FY FL+NF  LH+     SG+       RP++F+GESHAGHYIPSM  YIL KN+  G+  + + V G  IGNGWF P  QY ++  A+G GLID  Q+R L   E  C  ++E   YN + C  + D+ I  S A    + +VS+YD R Y L  QFPPG   VEAYL            K V AAIHA+        ++ECTD P+  L+  DGLGV  ++   L++GVR LFFNG  DLICNHVGN  ALE+L  W   K+W+ A R  W        D  G          G++KE     L FL V+ +GHMVPLDQP  AL M+K F+   +F   +Q L SV
Sbjct:  143 QVDSDFYGFLTNFFMLHADKFLKSGEDGRKVLKRPLYFSGESHAGHYIPSMIDYILNKNK--GKTSIDISVTGCAIGNGWFHPYYQYSIAQAAYGAGLIDLAQKRSLDMDERKCQGNLEKKKYNTNICWNIGDTPIHES-AGHGSLFKVSLYDTRRYVLSGQFPPGKHVVEAYLGGIATEPSFTASKQVLAAIHATQSLDARQMYKECTDPPYFALAHQDGLGVVDKIVRSLDSGVRFLFFNGINDLICNHVGNEIALEKL-PWRNIKKWQRAERYAWSPKKSNPLDPSG--------AAGFMKEYEN--LQFLKVMEAGHMVPLDQPEIALKMMKTFIYRRSFHTKKQELKSV 482          
BLAST of mRNA_Ecto-sp9_F_contig8899.17074.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y353_AURAN)

HSP 1 Score: 242 bits (617), Expect = 2.050e-70
Identity = 137/322 (42.55%), Postives = 187/322 (58.07%), Query Frame = 1
Query:    1 QVDEQFYLFLSNFLELHS-RFKAGSGKSRPIFFTGESHAGHYIPSMTAYILAKNEAAGEGE-LVVDVQGMMIGNGWFDPVSQYDVSDFAFGMGLIDSGQRRGLKKQEESCLSSIEAGNYNDHGCLGLMDSVIAASNARKVGVPRVSMYDVRDYEL-GRQFPPGHATVEAYLNRKDVRAAIHASSCPIKFQECTDQPFVHLSKWDGLGVTKELRSILN---AGVRSLFFNGQYDLICNHVGNLKALERLGDWTGDKEWESARRGVWLSDDKGKGHGGHRRPIGYVKEKRGNPLTFLLVLNSGHMVPLDQPRAALDMLKRFLSG 948
            ++    + FL NF +LH+ +F    G     F  GESHAGHY+P +  Y+L +N   GE +  V+ + G+ IGNGW +P  QY  ++ A G+GL+  GQ R L  +E  C+++++ G YN   C  L+D V+A S +R     RVSMYDV  +E  G +FPPGH  +E YLN + VR AIH +     F ECTD P+  LS  DG+GV+ EL ++L+     VR LFFNG  DL+CNH+     LE+L  W G   +  + + VW         G    P GYVK   G  LT+L VL+SGHMVP+D P  ALDM+ RF+ G
Sbjct:  120 EISSAMHAFLLNFFDLHADKFVKQDGARVDFFMAGESHAGHYVPHLAKYVLDRN---GEAQNRVISLAGLAIGNGWTEPRYQYAATEVAHGLGLVSEGQARTLASKERQCVANLDRGVYNSRVCFDLLDDVVADSGSRSRA--RVSMYDVGRWEPPGAEFPPGHKALERYLNVRAVRRAIHVTHSAA-FLECTDPPYDALSSRDGVGVSAELAAVLDDPRRTVRVLFFNGVRDLVCNHLRTETVLEKLA-WAGATSYARSGKQVWYV-------GSSAAPAGYVKNAYGQ-LTYLAVLDSGHMVPMDAPARALDMIDRFVRG 426          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8899.17074.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Carboxypeptidase0.000e+091.97(Partial) (Fragment) n=1 Tax=Ectocarpus siliculosu... [more]
Uncharacterized4.940e-19697.85protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
EGF-like4.410e-12385.56domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Alpha/Beta5.410e-9449.07hydrolase protein n=1 Tax=Tribonema minus TaxID=30... [more]
Pheromone1.230e-8647.27processing carboxypeptidase n=2 Tax=Monodopsidacea... [more]
Hypothetical2.830e-7936.26protein n=1 Tax=Phaeomonas parva TaxID=124430 RepI... [more]
Hypothetical4.870e-7937.53protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=... [more]
Alpha/beta-hydrolase1.770e-7442.70n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=63... [more]
Hypothetical2.010e-7243.79protein n=1 Tax=Corethron hystrix TaxID=216773 Rep... [more]
Uncharacterized2.050e-7042.55protein (Fragment) n=1 Tax=Aureococcus anophageffe... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8899contigEcto-sp9_F_contig8899:478..5648 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score986.1
Seed ortholog evalue6.9e-285
Seed eggNOG ortholog2880.D8LQG6
Preferred nameKEX1
KEGG koko:K01288,ko:K09645
GOsGO:0000003,GO:0000322,GO:0000323,GO:0000324,GO:0000746,GO:0000747,GO:0001906,GO:0003674,GO:0003824,GO:0004180,GO:0004185,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005794,GO:0005802,GO:0006508,GO:0006518,GO:0006807,GO:0006915,GO:0007039,GO:0008150,GO:0008152,GO:0008219,GO:0008233,GO:0008236,GO:0008238,GO:0008277,GO:0009056,GO:0009057,GO:0009058,GO:0009405,GO:0009966,GO:0009968,GO:0009987,GO:0010467,GO:0010515,GO:0010646,GO:0010648,GO:0010720,GO:0010969,GO:0012501,GO:0012505,GO:0016485,GO:0016787,GO:0017171,GO:0019538,GO:0019748,GO:0019835,GO:0019953,GO:0022414,GO:0023051,GO:0023057,GO:0030163,GO:0030447,GO:0030448,GO:0031135,GO:0031137,GO:0031138,GO:0031640,GO:0031984,GO:0034305,GO:0034641,GO:0035821,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0043604,GO:0043900,GO:0043901,GO:0043937,GO:0043938,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044271,GO:0044364,GO:0044419,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0044550,GO:0044703,GO:0044764,GO:0045595,GO:0045597,GO:0045744,GO:0046937,GO:0046938,GO:0046999,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0051603,GO:0051604,GO:0051704,GO:0051715,GO:0060238,GO:0060240,GO:0060284,GO:0065007,GO:0070008,GO:0070011,GO:0071704,GO:0075306,GO:0075307,GO:0090029,GO:0098791,GO:0140096,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1903664,GO:1903666,GO:2000241,GO:2000242
EggNOG free text desc.PFAM Peptidase S10, serine carboxypeptidase
EggNOG OGsCOG2939@1,KOG1282@2759
EC3.4.16.6
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCarboxypeptidase
Ec32 orthologEc-10_005560.1
Exons8
Model size1725
Cds size1725
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8899.17074.1prot_Ecto-sp9_F_contig8899.17074.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig8899 478..5648 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930943.4396393-CDS-Ecto-sp9_F_contig8899:477..6511622930943.4396393-CDS-Ecto-sp9_F_contig8899:477..651Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8899 478..651 +
1692278960.1694949-CDS-Ecto-sp9_F_contig8899:477..6511692278960.1694949-CDS-Ecto-sp9_F_contig8899:477..651Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8899 478..651 +
1622930943.4606109-CDS-Ecto-sp9_F_contig8899:859..9251622930943.4606109-CDS-Ecto-sp9_F_contig8899:859..925Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8899 860..925 +
1692278960.1807723-CDS-Ecto-sp9_F_contig8899:859..9251692278960.1807723-CDS-Ecto-sp9_F_contig8899:859..925Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8899 860..925 +
1622930943.47243-CDS-Ecto-sp9_F_contig8899:1393..15061622930943.47243-CDS-Ecto-sp9_F_contig8899:1393..1506Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8899 1394..1506 +
1692278960.1894462-CDS-Ecto-sp9_F_contig8899:1393..15061692278960.1894462-CDS-Ecto-sp9_F_contig8899:1393..1506Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8899 1394..1506 +
1622930943.4837317-CDS-Ecto-sp9_F_contig8899:2074..22161622930943.4837317-CDS-Ecto-sp9_F_contig8899:2074..2216Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8899 2075..2216 +
1692278960.1985772-CDS-Ecto-sp9_F_contig8899:2074..22161692278960.1985772-CDS-Ecto-sp9_F_contig8899:2074..2216Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8899 2075..2216 +
1622930943.5022085-CDS-Ecto-sp9_F_contig8899:2573..26741622930943.5022085-CDS-Ecto-sp9_F_contig8899:2573..2674Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8899 2574..2674 +
1692278960.2079887-CDS-Ecto-sp9_F_contig8899:2573..26741692278960.2079887-CDS-Ecto-sp9_F_contig8899:2573..2674Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8899 2574..2674 +
1622930943.5214639-CDS-Ecto-sp9_F_contig8899:3359..34591622930943.5214639-CDS-Ecto-sp9_F_contig8899:3359..3459Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8899 3360..3459 +
1692278960.218125-CDS-Ecto-sp9_F_contig8899:3359..34591692278960.218125-CDS-Ecto-sp9_F_contig8899:3359..3459Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8899 3360..3459 +
1622930943.5442011-CDS-Ecto-sp9_F_contig8899:3881..40221622930943.5442011-CDS-Ecto-sp9_F_contig8899:3881..4022Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8899 3882..4022 +
1692278960.228599-CDS-Ecto-sp9_F_contig8899:3881..40221692278960.228599-CDS-Ecto-sp9_F_contig8899:3881..4022Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8899 3882..4022 +
1622930943.5632784-CDS-Ecto-sp9_F_contig8899:4760..56481622930943.5632784-CDS-Ecto-sp9_F_contig8899:4760..5648Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8899 4761..5648 +
1692278960.2425773-CDS-Ecto-sp9_F_contig8899:4760..56481692278960.2425773-CDS-Ecto-sp9_F_contig8899:4760..5648Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8899 4761..5648 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig8899.17074.1

>prot_Ecto-sp9_F_contig8899.17074.1 ID=prot_Ecto-sp9_F_contig8899.17074.1|Name=mRNA_Ecto-sp9_F_contig8899.17074.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=575bp
QVDEQFYLFLSNFLELHSRFKAGSGKSRPIFFTGESHAGHYIPSMTAYIL
AKNEAAGEGELVVDVQGMMIGNGWFDPVSQYDVSDFAFGMGLIDSGQRRG
LKKQEESCLSSIEAGNYNDHGCLGLMDSVIAASNARKVGVPRVSMYDVRD
YELGRQFPPGHATVEAYLNRKDVRAAIHASSCPIKFQECTDQPFVHLSKW
DGLGVTKELRSILNAGVRSLFFNGQYDLICNHVGNLKALERLGDWTGDKE
WESARRGVWLSDDKGKGHGGHRRPIGYVKEKRGNPLTFLLVLNSGHMVPL
DQPRAALDMLKRFLSGDAFSDGEQTLVSVGPCDPGDEDCDDAGLPADFHP
AVALVPGTGGGGGGGGATPPAPRVVGTPVVRRDSAVVEFVPGDEQDGAGG
ASLAATGGGGGGEAAVVLFEARSSPDGLVGTSPTSPVVVEGLTPGRTYTF
AVTAVHAEAGAAAGEGGGARSVPSVGSPAVTPGCGQDGGGACGGHGACRE
GGHEGVCVCENGYGGDVCDVLLVAGGGLKGGGGGSSGGSFVGPDGYAGDI
KLLLEEDIPVLKSTGTTVCFRRGVG
back to top

mRNA from alignment at Ecto-sp9_F_contig8899:478..5648+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig8899.17074.1 ID=mRNA_Ecto-sp9_F_contig8899.17074.1|Name=mRNA_Ecto-sp9_F_contig8899.17074.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=5171bp|location=Sequence derived from alignment at Ecto-sp9_F_contig8899:478..5648+ (Ectocarpus species9 EcSCA_722f female)
CAGGTGGACGAGCAATTCTACCTTTTTCTGTCCAACTTTCTGGAGCTCCA TTCTCGGTTCAAGGCCGGGAGCGGCAAGTCCCGCCCGATATTCTTCACGG GCGAGTCTCACGCAGGGCACTACATCCCTTCCATGACGGCCTACATTCTG GCCAAAAACGAAGCCGCTGGAGAGGTACGGGAACCCCCCTCCCCCCCATA AGGTTGCCTCCCAACGATATGATACGAGGACACTACAGGACACGCTCGTG ACATTTTCTGCTCTTTTCGCCCGTCTCCTATGTGATGGGTTACCAAGTTT AGCTTGAATCACAACGGAGACGGCGAAGTCTTCATTGTTGCTTTCTGATG GTGTCTTCGCTTTTGATGGTGCGCTTTTGCAGGGAGAGCTGGTTGTCGAC GTCCAGGGAATGATGATCGGCAACGGGTGGTTCGATCCAGTTTCCCAGGT ATGTGGTTGCAGCGGGGGCACAGCAACCGTATTACCGCTTTCGCACCATT CTCCTCCGCAGGAGCCCCGCTGATGTGCTGCGGTGGCCCATGACGTCTCT TTCGATGCCGCCTCGCCAAGCGCAACAACGTATGATGTTTATGTTAGTCG GTTCTCACGTACGATTGTGGCATCGGGTCGGCGCGTTCGGTGTCGCCACG TGCGCTGCTGTAGTAACCGTCCTTCCCTGTGTAAGGCCGCAGGGTACCAA GGGATGTGTGCATAGCCGACCTTGTACCGGGCACCCGGCGCTATTCACAG TATGCGCGACTGCACTTGAACGATCCATCCGTGTCACGCGATTTCACGGA GGCCCCGGCCTTGTTCGTGTACAGCAGGGACCACTAATAGTCCTGCTGTG TAACGATGTCTCGATCCTCCCATGTTTCGGTGTCGAAACTGCTCCTCTTT GGTTCCTCTTCTGCAGTACGACGTGAGCGACTTCGCGTTCGGGATGGGAC TGATCGACTCCGGGCAGAGGCGGGGGCTGAAGAAGCAGGAGGAGAGCTGC CTATCATCGATCGAAGCCGGAAACTACAAGTGAGCGCTGGGCGCGCCGGC GACGCCGCACGGCAGAAAGAGAGAGAGAGAGTAGCTGTACCGTATGCCGG TGGGAAGTCGTTGCCTTTAGTGCCACCGTTACGAGACAGACAGACAGACA GAGATACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCAACCGC TCCTGCTCCGATTTCTTGGATCGCGCTAGGCTGGATGCCGCTAGCAGCCA GGTGTTTGCTGCAGGTTTACGTCGTTTGACCGTTGGATGCGCTTGGAACG CTTCCATGTACACACCGTCGTCTTGTTTTTTTTTGTCCTATGCATACCTC TGCTGTGACTGCTCTCCGGATCTACACACGATGGAACGTAAGTATGTGAA CGCCGCAACTGAGCGTTGCGACCGGCGTGGCGACTCAGCGCCGGCTGCCA GCAGAAACATGCGACCACCTATCGTCCACCTCTCCTCGCAGCAGCGATTC ATCACCCCTTTCCCCCTCCCGGTCGGCTTGCTGTCTTGTCCCTTGGCGCT CTCTCCATGCCCTCCGAACGCGAAAATCTGCCCACCGAAAACAATAGCGA CCATGGTTGCTTGGGATTGATGGATTCGGTCATAGCCGCCAGCAACGCTA GGAAGGTCGGGGTGCCCAGAGTGTCCATGTACGACGTGCGCGACTATGAG CTCGGCAGACAGTTTCCCCCCGGACACGCTACCGTCGAGGTGAAGCAGGA ACTTGAGCAGGTTTTCCATTTGCGCTTCCCCGCCGTCCGTGGTCTGGTCT GGCCTTGCTGCCCTCGGAAGAGGCCGCCTGCTGCTGTTTTCTCGCCGCCG CCGCCGCCGCCGCCGGCCGTGTGTGTGTATCGTTTTCTCCTGACCAGGCT AGAGAAAGCACGCCGGTAGCCATGGTCCGCTCCGCACGCCACAGAGGACG AACCCCACCCCCCTAAAGTCGCCAAATGCGATTCGGTCGACTACTACGAC TGCTACCCTGCCCGTGATCATGCAAACAACCGTCTACTTCCACCTATCCA CCTTACGTTTGGCGCCGCGTTTTTTTTTTGGGGGGGGGGGTGTCAGGCGT ATCTCAACCGGAAGGACGTAAGGGCGGCGATCCACGCCTCCAGCTGCCCC ATCAAGTTCCAGGAGTGCACAGACCAGCCCTTTGTTCACCTTTCAAAGTG AGGATCAACAATGTACTCACCCACGCTCTGCAACACGGGACAGGGAAACG GGACTACTTTTGAAATGGCTCCCTGGGTCCGTTGCGTGCCGTTGGTAACG TAAGGTATCACACCCCCGGGAGCAATTTTTAGAGCTCGAGTAGTCCACGA CGAAGAGGATGCATCAATCAAACGAGGCGTTTTGTCGGAAAGCTCTCCAC AAGACGGTTCCCGCACCACCATTTTCGGCACCGCCAATTTTTGTACTGTG GAGCAATCGAGCCTTCTTGAAAAATTGGCTCCAAGGGGGTGTGGTATCTT GTGTCATGTCATGTCACCCACGGTAGTTTTGTGTAGGGTATTCCTCGCCG CGTGCGGCCCTGCCCAGGCAGACGGGTGGATGCAGTAGTGGTCCCGATGT ATCGCGGTCCCGAATAGAGCGCTTCCTTATGTATCGCGGAAACAATTCCT TAGCACAACAACCTAGCCTGCTACTAAATTACCACAGGGACCTTCCCCCA TGTATTAGCGTACGATGGCCTACGTAGGGGAGGTCTAGTCTATAGAAGGC CCAAGCTACATATATCGTGATTTTATTCTGGTGCTCTCCTCGCGTTGCTG CTGTCGAGCGAAATGTCGCCGACCCTCTCGCCCCTCCGTCGCCTTGCCTT CCCCCGCCGGCGACAATTCTCTGATGCTGCAGGTGGGACGGGCTGGGGGT GACGAAAGAACTGCGGTCGATCCTGAATGCGGGCGTCCGATCCCTCTTCT TCAACGGACAGTACGACCTCATTTGCAACCACGTGAGTGTGCCAACGAGC AAACGAGCCACCCTAAAACGTCTTCCCACCTCCTCCTGTGTCCGGGGGAT GGATCGCTTTGCGAGCAGCCTTCCACGGCGGAAAAAAAGCACAGGATACA GTCGGGGGCCGTCCATAGTGCGGGTATAGTATGCGCCAAGCGCTTTCACC CGCACAATAGCGAGCGGGCACCCGCACTATTCTGTGGTATAAACCATCTT GATTGTTCCATCTGTGCCAGCGAATTTCACCCGCACTATACCGGGCACGC GCACTTTAGAGGGGCCCCGACTGCTGCAGTACTTTTGTAAGGACAATGGC ATTCCCGAGTTGCCGAGGAGATAAAACAGATCAACGGTGCCCCTCCCCGC CCCCCCCGCATTTACCCTTGTGAACTAACTAACCAAATTTTCTCTCTCCC CCAGGTGGGCAACCTGAAGGCTCTGGAGAGGCTCGGGGACTGGACGGGCG ACAAGGAGTGGGAGTCTGCGAGACGGGGAGTGTGGCTGTCTGACGACAAA GGAAAAGGACACGGGGGGCACCGCCGGCCGATAGGATACGTCAAGGTGCG ATACGGGTAGCCCGCGAAAAAGCCTTGGGTTGCCCTCCTCCTCCTGCTGC TGCTGGATGACGTTGGAACGTTAGTCGTTTGTGCCGCGCTTGAGTTGGTG TTGCCATTGGTACCCTGCGATGCAGAACAGATAGCGACGATGAGGTAGCT GTCGGTACTGTGGTGTGGAAAAGGAAACCTGGAATGTCGTGAACAACGGT CGCATACCGCGAAGTCCTCCCCGCCCCCCCGCGACTGCAAAGGATGCCGA GAGTTTCGTTTGCCCCCATCCACGCTAGATCTTGACCGCAAACGACGGCG GACTGCTGTTGGCTCTCTAATCTCGCTGCGAGCACAGGACACGCGTGCGT TGATCCTCCGCGCCGTCTGCTGACTTCGGCGGTCCCTTGACACACGTGCG AAAGGCAAAGAGTGGTCACGCGAGGGTACAGCCACACTCGACCTGTGGCC TTGGAGGCGATCGACTGTACAGACAAATATCGGCTGCTGTGGTCGTAGAT GCCTACTTTTACAAGTCCCCCACCCCCCCTTTTTGGTTAATCCTCATCCT TGTGAAACGCAGCCTGAACCGGCGAAAACCCGGCATTTCGCTCCGTCCCG ATATGGTAGGGATGCGAGGTCAATGGTCTGCAAACGATTACGGCATGCGT TTACACGAGTACACTCCCCCCTTACTATTCACGTGCCGTCCTCCGCCGCA CTCCTTCCGCACCGGCGTCCATTGCCCGCCCAGGAGAAACGCGGGAACCC GCTGACCTTCCTGCTGGTCCTAAACTCCGGGCACATGGTCCCGCTTGACC AACCGCGTGCCGCCCTGGACATGCTCAAGCGGTTCCTCTCCGGGGACGCG TTTTCCGACGGCGAGCAGACCCTTGTCAGCGTCGGGCCCTGCGACCCCGG CGACGAAGACTGCGACGATGCCGGACTCCCCGCCGACTTCCACCCCGCCG TCGCGCTCGTCCCCGGCACCGGCGGCGGCGGCGGCGGCGGCGGCGCAACC CCGCCCGCTCCAAGGGTCGTAGGCACGCCCGTGGTGCGGCGGGACTCGGC CGTCGTGGAGTTCGTGCCCGGTGACGAGCAGGACGGGGCAGGAGGGGCTT CGCTTGCCGCTACCGGCGGCGGCGGCGGCGGCGAGGCCGCGGTCGTCTTG TTCGAGGCGCGCAGCAGCCCGGACGGGCTCGTGGGAACCAGCCCCACGTC GCCGGTGGTTGTGGAGGGGCTCACCCCCGGCAGGACGTACACGTTCGCCG TCACCGCTGTCCATGCGGAGGCGGGGGCGGCGGCAGGCGAGGGGGGCGGG GCGCGCTCGGTCCCTTCGGTGGGGTCCCCGGCGGTAACCCCGGGCTGCGG CCAAGACGGCGGCGGCGCGTGTGGTGGGCACGGGGCGTGCAGGGAAGGGG GGCACGAGGGCGTCTGCGTCTGCGAGAACGGATACGGCGGGGACGTGTGC GACGTCCTGTTGGTGGCCGGCGGCGGGCTGAAGGGCGGCGGCGGCGGCAG CAGCGGGGGGTCGTTCGTCGGTCCGGACGGGTACGCGGGTGATATCAAGC TCTTGCTGGAGGAGGACATCCCTGTTCTCAAGAGTACAGGAACGACGGTG TGTTTCCGGAGGGGGGTGGGG
back to top

Coding sequence (CDS) from alignment at Ecto-sp9_F_contig8899:478..5648+

>mRNA_Ecto-sp9_F_contig8899.17074.1 ID=mRNA_Ecto-sp9_F_contig8899.17074.1|Name=mRNA_Ecto-sp9_F_contig8899.17074.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=3450bp|location=Sequence derived from alignment at Ecto-sp9_F_contig8899:478..5648+ (Ectocarpus species9 EcSCA_722f female)
CAGGTGGACGAGCAATTCTACCTTTTTCTGTCCAACTTTCTGGAGCTCCA
TTCTCGGTTCAAGGCCGGGAGCGGCAAGTCCCGCCCGATATTCTTCACGG
GCGAGTCTCACGCAGGGCACTACATCCCTTCCATGACGGCCTACATTCTG
GCCAAAAACGAAGCCGCTGGAGAGCAGGTGGACGAGCAATTCTACCTTTT
TCTGTCCAACTTTCTGGAGCTCCATTCTCGGTTCAAGGCCGGGAGCGGCA
AGTCCCGCCCGATATTCTTCACGGGCGAGTCTCACGCAGGGCACTACATC
CCTTCCATGACGGCCTACATTCTGGCCAAAAACGAAGCCGCTGGAGAGGG
AGAGCTGGTTGTCGACGTCCAGGGAATGATGATCGGCAACGGGTGGTTCG
ATCCAGTTTCCCAGGGAGAGCTGGTTGTCGACGTCCAGGGAATGATGATC
GGCAACGGGTGGTTCGATCCAGTTTCCCAGTACGACGTGAGCGACTTCGC
GTTCGGGATGGGACTGATCGACTCCGGGCAGAGGCGGGGGCTGAAGAAGC
AGGAGGAGAGCTGCCTATCATCGATCGAAGCCGGAAACTACAATACGACG
TGAGCGACTTCGCGTTCGGGATGGGACTGATCGACTCCGGGCAGAGGCGG
GGGCTGAAGAAGCAGGAGGAGAGCTGCCTATCATCGATCGAAGCCGGAAA
CTACAACGACCATGGTTGCTTGGGATTGATGGATTCGGTCATAGCCGCCA
GCAACGCTAGGAAGGTCGGGGTGCCCAGAGTGTCCATGTACGACGTGCGC
GACTATGAGCTCGGCAGACAGTTTCCCCCCGGACACGCTACCGTCGAGCG
ACCATGGTTGCTTGGGATTGATGGATTCGGTCATAGCCGCCAGCAACGCT
AGGAAGGTCGGGGTGCCCAGAGTGTCCATGTACGACGTGCGCGACTATGA
GCTCGGCAGACAGTTTCCCCCCGGACACGCTACCGTCGAGGCGTATCTCA
ACCGGAAGGACGTAAGGGCGGCGATCCACGCCTCCAGCTGCCCCATCAAG
TTCCAGGAGTGCACAGACCAGCCCTTTGTTCACCTTTCAAAGCGTATCTC
AACCGGAAGGACGTAAGGGCGGCGATCCACGCCTCCAGCTGCCCCATCAA
GTTCCAGGAGTGCACAGACCAGCCCTTTGTTCACCTTTCAAAGTGGGACG
GGCTGGGGGTGACGAAAGAACTGCGGTCGATCCTGAATGCGGGCGTCCGA
TCCCTCTTCTTCAACGGACAGTACGACCTCATTTGCAACCACGTGGGACG
GGCTGGGGGTGACGAAAGAACTGCGGTCGATCCTGAATGCGGGCGTCCGA
TCCCTCTTCTTCAACGGACAGTACGACCTCATTTGCAACCACGTGGGCAA
CCTGAAGGCTCTGGAGAGGCTCGGGGACTGGACGGGCGACAAGGAGTGGG
AGTCTGCGAGACGGGGAGTGTGGCTGTCTGACGACAAAGGAAAAGGACAC
GGGGGGCACCGCCGGCCGATAGGATACGTCAAGGTGGGCAACCTGAAGGC
TCTGGAGAGGCTCGGGGACTGGACGGGCGACAAGGAGTGGGAGTCTGCGA
GACGGGGAGTGTGGCTGTCTGACGACAAAGGAAAAGGACACGGGGGGCAC
CGCCGGCCGATAGGATACGTCAAGGAGAAACGCGGGAACCCGCTGACCTT
CCTGCTGGTCCTAAACTCCGGGCACATGGTCCCGCTTGACCAACCGCGTG
CCGCCCTGGACATGCTCAAGCGGTTCCTCTCCGGGGACGCGTTTTCCGAC
GGCGAGCAGACCCTTGTCAGCGTCGGGCCCTGCGACCCCGGCGACGAAGA
CTGCGACGATGCCGGACTCCCCGCCGACTTCCACCCCGCCGTCGCGCTCG
TCCCCGGCACCGGCGGCGGCGGCGGCGGCGGCGGCGCAACCCCGCCCGCT
CCAAGGGTCGTAGGCACGCCCGTGGTGCGGCGGGACTCGGCCGTCGTGGA
GTTCGTGCCCGGTGACGAGCAGGACGGGGCAGGAGGGGCTTCGCTTGCCG
CTACCGGCGGCGGCGGCGGCGGCGAGGCCGCGGTCGTCTTGTTCGAGGCG
CGCAGCAGCCCGGACGGGCTCGTGGGAACCAGCCCCACGTCGCCGGTGGT
TGTGGAGGGGCTCACCCCCGGCAGGACGTACACGTTCGCCGTCACCGCTG
TCCATGCGGAGGCGGGGGCGGCGGCAGGCGAGGGGGGCGGGGCGCGCTCG
GTCCCTTCGGTGGGGTCCCCGGCGGTAACCCCGGGCTGCGGCCAAGACGG
CGGCGGCGCGTGTGGTGGGCACGGGGCGTGCAGGGAAGGGGGGCACGAGG
GCGTCTGCGTCTGCGAGAACGGATACGGCGGGGACGTGTGCGACGTCCTG
TTGGTGGCCGGCGGCGGGCTGAAGGGCGGCGGCGGCGGCAGCAGCGGGGG
GTCGTTCGTCGGTCCGGACGGGTACGCGGGTGATATCAAGCTCTTGCTGG
AGGAGGACATCCCTGTTCTCAAGAGTACAGGAACGACGGTGTGTTTCCGG
AGGGGGGTGGGGGAGAAACGCGGGAACCCGCTGACCTTCCTGCTGGTCCT
AAACTCCGGGCACATGGTCCCGCTTGACCAACCGCGTGCCGCCCTGGACA
TGCTCAAGCGGTTCCTCTCCGGGGACGCGTTTTCCGACGGCGAGCAGACC
CTTGTCAGCGTCGGGCCCTGCGACCCCGGCGACGAAGACTGCGACGATGC
CGGACTCCCCGCCGACTTCCACCCCGCCGTCGCGCTCGTCCCCGGCACCG
GCGGCGGCGGCGGCGGCGGCGGCGCAACCCCGCCCGCTCCAAGGGTCGTA
GGCACGCCCGTGGTGCGGCGGGACTCGGCCGTCGTGGAGTTCGTGCCCGG
TGACGAGCAGGACGGGGCAGGAGGGGCTTCGCTTGCCGCTACCGGCGGCG
GCGGCGGCGGCGAGGCCGCGGTCGTCTTGTTCGAGGCGCGCAGCAGCCCG
GACGGGCTCGTGGGAACCAGCCCCACGTCGCCGGTGGTTGTGGAGGGGCT
CACCCCCGGCAGGACGTACACGTTCGCCGTCACCGCTGTCCATGCGGAGG
CGGGGGCGGCGGCAGGCGAGGGGGGCGGGGCGCGCTCGGTCCCTTCGGTG
GGGTCCCCGGCGGTAACCCCGGGCTGCGGCCAAGACGGCGGCGGCGCGTG
TGGTGGGCACGGGGCGTGCAGGGAAGGGGGGCACGAGGGCGTCTGCGTCT
GCGAGAACGGATACGGCGGGGACGTGTGCGACGTCCTGTTGGTGGCCGGC
GGCGGGCTGAAGGGCGGCGGCGGCGGCAGCAGCGGGGGGTCGTTCGTCGG
TCCGGACGGGTACGCGGGTGATATCAAGCTCTTGCTGGAGGAGGACATCC
CTGTTCTCAAGAGTACAGGAACGACGGTGTGTTTCCGGAGGGGGGTGGGG
back to top