mRNA_Ecto-sp9_F_contig8894.17071.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig8894.17071.1
Unique NamemRNA_Ecto-sp9_F_contig8894.17071.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig8894.17071.1 vs.
Match: Phospholipid-transporting (ATPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGJ4_ECTSI)

HSP 1 Score: 633 bits (1632), Expect = 1.240e-214
Identity = 320/321 (99.69%), Postives = 320/321 (99.69%), Query Frame = 1
Query:    1 SCRLLEPEMTLIKLKEKEGDPQSVANQLRALMTHFNRLVEDDGLVKRFWGHVKQSPLGLLRRSRRHGGGGGLSAPSSMGDRNRTGGVATMEEDGAATLPTPLLEQPQGAPPLSELTADSLALVLDGPSLAHVLGNPEAERMLLTLGSMCKSVIACRVSPAQKRLIVRLVKRGVVPTPVTLSIGDGANDVGMIQEAQIGVGISGKEGRQAVNNSDFAIAQFRFLKRLMLVHGHWDYRRVCKVILYSFYKNFVLTFCLFYFCFYTGFSGQSLFESLVYSGFNFFTAMPILLIGIFDKDVGNQTATECHKLYAVGRAGMDLNLR 963
            SCRLLEPEMTLIKLKEKEGDPQSV NQLRALMTHFNRLVEDDGLVKRFWGHVKQSPLGLLRRSRRHGGGGGLSAPSSMGDRNRTGGVATMEEDGAATLPTPLLEQPQGAPPLSELTADSLALVLDGPSLAHVLGNPEAERMLLTLGSMCKSVIACRVSPAQKRLIVRLVKRGVVPTPVTLSIGDGANDVGMIQEAQIGVGISGKEGRQAVNNSDFAIAQFRFLKRLMLVHGHWDYRRVCKVILYSFYKNFVLTFCLFYFCFYTGFSGQSLFESLVYSGFNFFTAMPILLIGIFDKDVGNQTATECHKLYAVGRAGMDLNLR
Sbjct:  726 SCRLLEPEMTLIKLKEKEGDPQSVVNQLRALMTHFNRLVEDDGLVKRFWGHVKQSPLGLLRRSRRHGGGGGLSAPSSMGDRNRTGGVATMEEDGAATLPTPLLEQPQGAPPLSELTADSLALVLDGPSLAHVLGNPEAERMLLTLGSMCKSVIACRVSPAQKRLIVRLVKRGVVPTPVTLSIGDGANDVGMIQEAQIGVGISGKEGRQAVNNSDFAIAQFRFLKRLMLVHGHWDYRRVCKVILYSFYKNFVLTFCLFYFCFYTGFSGQSLFESLVYSGFNFFTAMPILLIGIFDKDVGNQTATECHKLYAVGRAGMDLNLR 1046          
BLAST of mRNA_Ecto-sp9_F_contig8894.17071.1 vs.
Match: Phospholipid-transporting (ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHZ9_9STRA)

HSP 1 Score: 374 bits (961), Expect = 1.030e-115
Identity = 197/330 (59.70%), Postives = 246/330 (74.55%), Query Frame = 1
Query:    1 SCRLLEPEMTLIKLKEKEGDPQSVANQLRALMTHFNRLVEDDGLVKRFWGHVKQS--PLGLLRRSRRHGGGGGLSAPSSMGDRNRTGGVATMEEDGAATLPTPLLEQPQG-------APPLSELTADSLALVLDGPSLAHVLGNPEAERMLLTLGSMCKSVIACRVSPAQKRLIVRLVKRGVVPTPVTLSIGDGANDVGMIQEAQIGVGISGKEGRQAVNNSDFAIAQFRFLKRLMLVHGHWDYRRVCKVILYSFYKNFVLTFCLFYFCFYTGFSGQSLFESLVYSGFNFFTAMPILLIGIFDKDVGNQTATECHKLYAVGRAGMDLNLR 963
            SCRLLEP MTLIKLKE++GDP SV  QL+ L  HF RL EDD L +  WG V +S  P G    + + G  G       +G+ +  GG+  +    AATLP PLLE+P         AP +S   +D+LA+V+DG SL H+LG+ + + + L +  MC+SV+ACRVSPAQKRL+VRLVK+ V P P+TL+IGDGANDVGMIQEAQ+GVG+SGKEGRQAVNN+DFAIAQFRFL+RL+LVHGHWDYRR+CKVILYSFYKN  LTF LFY+CFY+G SGQSL+ESLVYSG+NFF A+PIL +G+FD+DV ++ A    +LY VG   +DLN+R
Sbjct:  826 SCRLLEPHMTLIKLKERDGDPASVDRQLQGLCAHFGRLAEDDSLFQNQWGSVLRSVVPKGAKPAASKGGKRG-------VGEGDVEGGLGGVAA--AATLPEPLLERPPARSGAESEAPMIS---SDALAMVVDGASLVHILGHDDKQALFLRVACMCRSVVACRVSPAQKRLLVRLVKKNVRPAPITLAIGDGANDVGMIQEAQVGVGMSGKEGRQAVNNADFAIAQFRFLRRLLLVHGHWDYRRLCKVILYSFYKNIALTFILFYYCFYSGLSGQSLYESLVYSGYNFFLALPILCVGLFDRDVNDRAAAAAPRLYRVGTHNLDLNVR 1143          
BLAST of mRNA_Ecto-sp9_F_contig8894.17071.1 vs.
Match: Phospholipid-transporting (ATPase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8B9_HETAK)

HSP 1 Score: 331 bits (849), Expect = 6.040e-106
Identity = 173/325 (53.23%), Postives = 217/325 (66.77%), Query Frame = 1
Query:    1 SCRLLEPEMTLIKLKEKEG----DPQSVANQLRALMTHFNRLVEDDGLVKRFWGHVKQSPLGLLRRSRRHGGGGGLSAPSSMGDRNRTGGVATMEEDGAATLPTPLLEQPQGAPPLSELTADSLALVLDGPSLAHVLGNPEAERMLLTLGSMCKSVIACRVSPAQKRLIVRLVKRGVVPTPVTLSIGDGANDVGMIQEAQIGVGISGKEGRQAVNNSDFAIAQFRFLKRLMLVHGHWDYRRVCKVILYSFYKNFVLTFCLFYFCFYTGFSGQSLFESLVYSGFNFFTAMPILLIGIFDKDVGNQTATECHKLYAVGRAGMDLNLR 963
            SCRLL P+M +IKL   EG    DP++ A Q+R L  HF RL ED      +W  V     G   R+R                     G   M+ +   +LP PLL  P  AP   +LT+D LALV++G +L H++G  E ER  L +  +C+SVIACRVSP QKRL+VRLVK GV   P+TL++GDGANDVGMIQEAQ+GVGISGKEGRQAVN +DFAIAQFRFL+RL+ +HG WDYRR CKV+LYSFYKN VL F LFYF  + G+SGQSL++S VY+G+NFF  MPIL++G+FD+DV  +TA     LY  GR  MD++L+
Sbjct:   60 SCRLLHPDMVMIKLAGGEGGSGGDPEATARQVRLLYRHFARLTEDQASFGHWWQKVASRLPGAAARAR---------------------GETEMDGEALPSLPAPLLSAPPQAPAFEDLTSDHLALVVEGSALLHIMGRAELERKFLRVARLCRSVIACRVSPEQKRLLVRLVKLGVEGAPITLAVGDGANDVGMIQEAQVGVGISGKEGRQAVNTADFAIAQFRFLRRLLFLHGRWDYRRTCKVVLYSFYKNMVLAFILFYFTCFCGWSGQSLYDSWVYAGYNFFLGMPILIVGLFDRDVSEKTALGYPSLYMSGRENMDMSLK 363          
BLAST of mRNA_Ecto-sp9_F_contig8894.17071.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI04_9PHAE)

HSP 1 Score: 315 bits (806), Expect = 2.210e-105
Identity = 167/190 (87.89%), Postives = 172/190 (90.53%), Query Frame = 1
Query:   25 MTLIKLKEKEGDPQSVANQLRALMTHFNRLVEDDGLVKRFWGHVKQSPLGLLRRSRRHGGGGG--LSAPSSMGDRNRTGGVATMEEDGAATLPTPLLEQPQGAPPLSELTADSLALVLDGPSLAHVLGNPEAERMLLTLGSMCKSVIACRVSPAQKRLIVRLVKRGVVPTPVTLSIGDGANDVGMIQEAQ 588
            MTLIKLKE+EGDPQSV NQLRALM +F RLVED+GLVKRFWGHVKQ+PLGLLRRSR         LSAPSSM DRNRT GVATMEEDGAATLPTPLLEQPQGAP +SELTADSLALVLDGPSLAHVLGN EAERMLLTLGSMC SVIACRVSPAQKRLIVRLVKRGVVP PVTLSIGDGANDVGMIQEAQ
Sbjct:    1 MTLIKLKEQEGDPQSVVNQLRALMEYFKRLVEDEGLVKRFWGHVKQNPLGLLRRSRXXXXXXXXXLSAPSSMRDRNRTEGVATMEEDGAATLPTPLLEQPQGAPQISELTADSLALVLDGPSLAHVLGNAEAERMLLTLGSMCTSVIACRVSPAQKRLIVRLVKRGVVPKPVTLSIGDGANDVGMIQEAQ 190          
BLAST of mRNA_Ecto-sp9_F_contig8894.17071.1 vs.
Match: Phospholipid-transporting (ATPase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TGI1_9STRA)

HSP 1 Score: 313 bits (802), Expect = 2.640e-94
Identity = 180/326 (55.21%), Postives = 222/326 (68.10%), Query Frame = 1
Query:    1 SCRLLEPEMTLIKLKEKEGDPQSVANQLRALMTHFNRLVE-----DDGLVKRFWGHVKQSPLGLLRRSRRHGGGGGLSAPSSMGDRNRTGGVATMEEDGAATLPTPLLEQPQGAPPLSELTADSLALVLDGPSLAHVLGNPEAERMLLTLGSMCKSVIACRVSPAQKRLIVRLVKRGVVPTPVTLSIGDGANDVGMIQEAQIGVGISGKEGRQAVNNSDFAIAQFRFLKRLMLVHGHWDYRRVCKVILYSFYKNFVLTFCLFYFCFYTGFSGQSLFESLVYSGFNFFTAMPILLIGIFDKDVGNQTATECHKLYAVGRAGMDLNLR 963
            SCRLL   MTL+KLK+  GDP ++   L+ L+   + LVE      D L +R    + Q      RR     G G   +    G+ +    V  +E++       P  E    AP   ELT+D++ALV+DGP+LAHVLG+PE E M L L S+C+SV+ACRVSPAQKRL+VRLVK GV P P+TLSIGDGANDV MIQEAQIGVGISGKEG+QAVN++DFAIAQFR+L+RL+L+HG +DYRR+ KVILYSFYKN VLTF LFY+ F+TGFSGQSLF  LVYS FNF  AMPI+ +G FD D+  Q       +Y  GR  MDLN+R
Sbjct:  716 SCRLLSSRMTLLKLKDT-GDPATIRRHLKKLLNALDWLVERERKLGDTLGRRIMERMTQ----CARR-----GPGDFRSSWQAGEED----VKILEDEDLKVCFRPQNE----APHFKELTSDTVALVVDGPALAHVLGDPEYEAMFLRLSSICRSVVACRVSPAQKRLVVRLVKAGVKPMPITLSIGDGANDVAMIQEAQIGVGISGKEGQQAVNSADFAIAQFRYLRRLLLIHGRYDYRRMSKVILYSFYKNMVLTFILFYYLFFTGFSGQSLFNDLVYSAFNFLCAMPIICVGFFDIDIFPQHVLAWKWVYMSGRDHMDLNIR 1023          
BLAST of mRNA_Ecto-sp9_F_contig8894.17071.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CMU9_9STRA)

HSP 1 Score: 263 bits (671), Expect = 7.440e-81
Identity = 136/214 (63.55%), Postives = 167/214 (78.04%), Query Frame = 1
Query:  328 PPLSELTADSLALVLDGPSLAHVLGNPEAERMLLTLGSMCKSVIACRVSPAQKRLIVRLVKRGVVPTPVTLSIGDGANDVGMIQEAQIGVGISGKEGRQAVNNSDFAIAQFRFLKRLMLVHGHWDYRRVCKVILYSFYKNFVLTFCLFYFCFYTGFSGQSLF--ESLVYSGFNFFTAMPILLIGIFDKDVGNQTATECHKLYAVGRAGMDLNLR 963
            P LSE++ + LALV+DGP+L  ++ + EA   LL LG  CK+V+ACRVSPAQK+LIV++VK G+   P+TLSIGDGANDV MIQEAQIGVGISGKEGRQAVN+SDFAIAQFRFLKRL+LVHG W+Y R  KVI+YSFYKN VL + LF+F   +GFSGQSL+  +S  YSGFNFF  +P  L+GIF+ DV   TA + HKLY  G  G +LN++
Sbjct:   27 PVLSEMSTEHLALVVDGPALLEIMDDEEARHQLLQLGCFCKAVLACRVSPAQKQLIVKMVKDGLPTKPITLSIGDGANDVPMIQEAQIGVGISGKEGRQAVNSSDFAIAQFRFLKRLLLVHGRWNYLRTAKVIIYSFYKNTVLVWLLFFFACESGFSGQSLYGGDSWCYSGFNFFLGLPPFLVGIFETDVKADTAMKYHKLYLSGLQGKELNIK 240          
BLAST of mRNA_Ecto-sp9_F_contig8894.17071.1 vs.
Match: PhoLip_ATPase_C (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL8_9PHAE)

HSP 1 Score: 246 bits (628), Expect = 1.550e-75
Identity = 121/123 (98.37%), Postives = 122/123 (99.19%), Query Frame = 1
Query:  595 VGISGKEGRQAVNNSDFAIAQFRFLKRLMLVHGHWDYRRVCKVILYSFYKNFVLTFCLFYFCFYTGFSGQSLFESLVYSGFNFFTAMPILLIGIFDKDVGNQTATECHKLYAVGRAGMDLNLR 963
            +GISGKEGRQAVNNSDFAIAQFRFLKRLMLVHGHWDYRRVCKVILYSFYKNFVLTFCLFYFCFYTGFSGQSLFESLVYSGFNFF AMPILLIGIFDKDVGNQTATECHKLYAVGRAGMDLNLR
Sbjct:    1 MGISGKEGRQAVNNSDFAIAQFRFLKRLMLVHGHWDYRRVCKVILYSFYKNFVLTFCLFYFCFYTGFSGQSLFESLVYSGFNFFLAMPILLIGIFDKDVGNQTATECHKLYAVGRAGMDLNLR 123          
BLAST of mRNA_Ecto-sp9_F_contig8894.17071.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C2W0_9STRA)

HSP 1 Score: 240 bits (613), Expect = 2.670e-75
Identity = 121/209 (57.89%), Postives = 158/209 (75.60%), Query Frame = 1
Query:  352 DSLALVLDGPSLAHVLGNPEAERMLLTLGSMCKSVIACRVSPAQKRLIVRLVK-----RGVVPTPVTLSIGDGANDVGMIQEAQIGVGISGKEGRQAVNNSDFAIAQFRFLKRLMLVHGHWDYRRVCKVILYSFYKNFVLTFCLFYFCFYTGFSGQSLFESLVYSGFNFFTAMPILLIGIFDKDVGNQTATECHKLYAVGRAGMDLNLR 963
            DSL++++ G +L H+LG+PE+E  L+ +  +CKSVIACRVSP QK  +V LV+     R     P+ L+IGDGANDVGMIQ+AQ+GVGISGKEG QAVN+SDFAIAQFRFL+RL+LVHG W YRR+ KV+LYSFYKN V+T  LF++  +TGFSG SL+ESLVYSG+NFF   PI +IG  D+D+ +  A    ++Y  GR  ++L +R
Sbjct:   33 DSLSVIVTGEALTHILGDPESEHALMVVAQLCKSVIACRVSPKQKADLVDLVRHRSPGRSGKNKPMCLAIGDGANDVGMIQQAQVGVGISGKEGLQAVNSSDFAIAQFRFLRRLLLVHGRWSYRRMSKVVLYSFYKNIVITLTLFFYSMFTGFSGASLYESLVYSGYNFFLGWPIFIIGCIDRDLPDSYALAHPQVYVSGRKNLNLGVR 241          
BLAST of mRNA_Ecto-sp9_F_contig8894.17071.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GET8_9STRA)

HSP 1 Score: 246 bits (628), Expect = 3.030e-75
Identity = 123/206 (59.71%), Postives = 160/206 (77.67%), Query Frame = 1
Query:  340 ELTADSLALVLDGPSLAHVLGNPEAERMLLTLGSMCKSVIACRVSPAQKRLIVRLVKRGVVPTPVTLSIGDGANDVGMIQEAQIGVGISGKEGRQAVNNSDFAIAQFRFLKRLMLVHGHWDYRRVCKVILYSFYKNFVLTFCLFYFCFYTGFSGQSLFESLVYSGFNFFTAMPILLIGIFDKDVGNQTATECHKLYAVGRAGMDLN 957
            ++ ++ +AL++DGPSL  +  +PE +  LL +   C+ V+ACRVSP QK+LIV LV+ G+   PVTL+IGDGANDVGMIQEAQIGVGISG EGRQAVNNSDFAIAQF+FLKRL++VHG W+YRR+ KVI+YSF+KN VLT  L ++ F    SGQSL+E+ VY+GFNFF  +PILLIG FD+D+ ++ A     +Y+VGR   D+N
Sbjct:    1 QMNSEHVALIVDGPSLFTIFKHPEMKAKLLRIACFCRVVVACRVSPKQKQLIVDLVQTGLARRPVTLAIGDGANDVGMIQEAQIGVGISGHEGRQAVNNSDFAIAQFKFLKRLLIVHGRWNYRRISKVIVYSFHKNIVLTIILAFWTFNCALSGQSLYEAYVYTGFNFFLGVPILLIGFFDQDLSDKVAMANPGVYSVGREKRDMN 206          
BLAST of mRNA_Ecto-sp9_F_contig8894.17071.1 vs.
Match: Phospholipid-transporting (ATPase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQX5_9STRA)

HSP 1 Score: 260 bits (665), Expect = 6.120e-75
Identity = 153/310 (49.35%), Postives = 197/310 (63.55%), Query Frame = 1
Query:   67 SVANQLRALMTHFNRLVEDDGLVKRFWG-------HVKQSPLGLL------RRSRR-----------HGGGGGLSAPSSMGDRNRTGGVATMEEDGAATLPTPLLEQP------QGAPPLSELTADSLALVLDGPSLAHVLGNPEAERMLLTLGSMCKSVIACRVSPAQKRLIVRLVKRGVV-PTPVTLSIGDGANDVGMIQEAQIGVGISGKEGRQAVNNSDFAIAQFRFLKRLMLVHGHWDYRRVCKVILYSFYKNFVLTFCLFYFCFYTGFSGQSLFESLVYSGFNFFTAMPILLIGIFDKDVGNQT 903
            ++  QLR L+THF  L+EDD LV    G       +V   PL  +       RSRR           + G G   A + + D      V   EEDG         E+         + PL ++  D LAL++DGPSL  + G+ E ER+LL +  +CKSV+ACRVSPAQKR+++RLVK+GV  P P+TL+IGDGANDV MIQEAQ+GVGISG+EGRQAVN++DFAI+QFRF++ L+L HG W YRR  KVILYSFYKN VLTF LF + + TGFSGQSLFE  VY+ +NF  AMP +  G+FD+D+  +T
Sbjct:  905 ALRQQLRKLVTHFECLIEDDTLVDGLTGSSRGGHGNVGVKPLWRMWQKRRVERSRRRQRPSFYTKLFNSGAGVEEAGTGVNDMLLEPLVEDGEEDGGEEYHVGGWEENFVRHSVTSSNPLQDVQTDHLALIVDGPSLGRIFGDWEMERLLLRVARLCKSVVACRVSPAQKRMLIRLVKKGVKHPKPITLAIGDGANDVAMIQEAQVGVGISGREGRQAVNSADFAISQFRFIEPLLLKHGRWSYRRTSKVILYSFYKNIVLTFVLFAYTWLTGFSGQSLFEDYVYTSYNFMLAMPPICFGLFDRDISVET 1214          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8894.17071.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Phospholipid-transporting1.240e-21499.69ATPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 R... [more]
Phospholipid-transporting1.030e-11559.70ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=... [more]
Phospholipid-transporting6.040e-10653.23ATPase (Fragment) n=1 Tax=Heterosigma akashiwo Tax... [more]
Uncharacterized2.210e-10587.89protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Phospholipid-transporting2.640e-9455.21ATPase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=... [more]
Hypothetical7.440e-8163.55protein n=1 Tax=Dictyocha speculum TaxID=35687 Rep... [more]
PhoLip_ATPase_C1.550e-7598.37domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Hypothetical2.670e-7557.89protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014... [more]
Hypothetical3.030e-7559.71protein (Fragment) n=1 Tax=Dictyocha speculum TaxI... [more]
Phospholipid-transporting6.120e-7549.35ATPase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8894contigEcto-sp9_F_contig8894:1199..5484 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score615.1
Seed ortholog evalue1.7e-173
Seed eggNOG ortholog2880.D8LGJ4
Preferred nameDNF3
KEGG rclassRC00002
KEGG koko:K01509,ko:K01530,ko:K14802
KEGG TC3.A.3.8
KEGG ReactionR00086
KEGG Pathwayko00230,ko04742,map00230,map04742
GOsGO:0000749,GO:0003674,GO:0003824,GO:0004012,GO:0005215,GO:0005319,GO:0005548,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005794,GO:0005798,GO:0005802,GO:0005886,GO:0005937,GO:0006810,GO:0006811,GO:0006820,GO:0006869,GO:0006886,GO:0006892,GO:0006900,GO:0006996,GO:0008104,GO:0008150,GO:0009987,GO:0010033,GO:0010876,GO:0012505,GO:0015031,GO:0015711,GO:0015748,GO:0015833,GO:0015914,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019236,GO:0030133,GO:0030135,GO:0030136,GO:0030140,GO:0030427,GO:0031136,GO:0031137,GO:0031139,GO:0031224,GO:0031410,GO:0031982,GO:0031984,GO:0032456,GO:0033036,GO:0034204,GO:0034613,GO:0042221,GO:0042623,GO:0042886,GO:0042995,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043332,GO:0043492,GO:0043900,GO:0043902,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0045184,GO:0045332,GO:0046907,GO:0046999,GO:0048193,GO:0048194,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051286,GO:0051641,GO:0051649,GO:0051716,GO:0061024,GO:0065007,GO:0065008,GO:0070727,GO:0070867,GO:0070887,GO:0071310,GO:0071444,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0097035,GO:0097708,GO:0098791,GO:0120025,GO:0120038,GO:2000241,GO:2000243
EggNOG free text desc.phospholipid-translocating ATPase activity
EggNOG OGsCOG0474@1,KOG0206@2759
EC3.6.1.3,3.6.3.1
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03009
Hectar predicted targeting categoryother localisation
Exons6
Model size963
Cds size939
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930942.8954256-UTR-Ecto-sp9_F_contig8894:1198..12221622930942.8954256-UTR-Ecto-sp9_F_contig8894:1198..1222Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig8894 1199..1222 +
1692278959.6616726-UTR-Ecto-sp9_F_contig8894:1198..12221692278959.6616726-UTR-Ecto-sp9_F_contig8894:1198..1222Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig8894 1199..1222 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930942.9118369-CDS-Ecto-sp9_F_contig8894:1222..13511622930942.9118369-CDS-Ecto-sp9_F_contig8894:1222..1351Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8894 1223..1351 +
1692278959.6727438-CDS-Ecto-sp9_F_contig8894:1222..13511692278959.6727438-CDS-Ecto-sp9_F_contig8894:1222..1351Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8894 1223..1351 +
1622930942.940836-CDS-Ecto-sp9_F_contig8894:1789..20231622930942.940836-CDS-Ecto-sp9_F_contig8894:1789..2023Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8894 1790..2023 +
1692278959.6813715-CDS-Ecto-sp9_F_contig8894:1789..20231692278959.6813715-CDS-Ecto-sp9_F_contig8894:1789..2023Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8894 1790..2023 +
1622930942.9570785-CDS-Ecto-sp9_F_contig8894:2925..31261622930942.9570785-CDS-Ecto-sp9_F_contig8894:2925..3126Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8894 2926..3126 +
1692278959.6899319-CDS-Ecto-sp9_F_contig8894:2925..31261692278959.6899319-CDS-Ecto-sp9_F_contig8894:2925..3126Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8894 2926..3126 +
1622930942.9713237-CDS-Ecto-sp9_F_contig8894:3911..40431622930942.9713237-CDS-Ecto-sp9_F_contig8894:3911..4043Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8894 3912..4043 +
1692278959.7015257-CDS-Ecto-sp9_F_contig8894:3911..40431692278959.7015257-CDS-Ecto-sp9_F_contig8894:3911..4043Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8894 3912..4043 +
1622930942.9897308-CDS-Ecto-sp9_F_contig8894:4394..44781622930942.9897308-CDS-Ecto-sp9_F_contig8894:4394..4478Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8894 4395..4478 +
1692278959.7125213-CDS-Ecto-sp9_F_contig8894:4394..44781692278959.7125213-CDS-Ecto-sp9_F_contig8894:4394..4478Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8894 4395..4478 +
1622930943.0083454-CDS-Ecto-sp9_F_contig8894:5325..54841622930943.0083454-CDS-Ecto-sp9_F_contig8894:5325..5484Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8894 5326..5484 +
1692278959.7284715-CDS-Ecto-sp9_F_contig8894:5325..54841692278959.7284715-CDS-Ecto-sp9_F_contig8894:5325..5484Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8894 5326..5484 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8894.17071.1prot_Ecto-sp9_F_contig8894.17071.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig8894 1223..5484 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig8894.17071.1

>prot_Ecto-sp9_F_contig8894.17071.1 ID=prot_Ecto-sp9_F_contig8894.17071.1|Name=mRNA_Ecto-sp9_F_contig8894.17071.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=313bp
MTLIKLKEKEGDPQSVANQLRALMTHFNRLVEDDGLVKRFWGHVKQSPLG
LLRRSRRHGGGGGLSAPSSMGDRNRTGGVATMEEDGAATLPTPLLEQPQG
APPLSELTADSLALVLDGPSLAHVLGNPEAERMLLTLGSMCKSVIACRVS
PAQKRLIVRLVKRGVVPTPVTLSIGDGANDVGMIQEAQIGVGISGKEGRQ
AVNNSDFAIAQFRFLKRLMLVHGHWDYRRVCKVILYSFYKNFVLTFCLFY
FCFYTGFSGQSLFESLVYSGFNFFTAMPILLIGIFDKDVGNQTATECHKL
YAVGRAGMDLNLR
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mRNA from alignment at Ecto-sp9_F_contig8894:1199..5484+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig8894.17071.1 ID=mRNA_Ecto-sp9_F_contig8894.17071.1|Name=mRNA_Ecto-sp9_F_contig8894.17071.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=4286bp|location=Sequence derived from alignment at Ecto-sp9_F_contig8894:1199..5484+ (Ectocarpus species9 EcSCA_722f female)
AGCTGCCGGCTGTTGGAGCCGGAGATGACTCTCATCAAGTTGAAGGAGAA GGAGGGGGACCCGCAGTCTGTAGCGAACCAGCTCAGGGCCTTGATGACCC ACTTCAACAGGCTGGTGGAAGACGACGGGCTGGTCAAGCGCTTCTGGGGA CATGTGAGGAGGACACAGAACCACGAAAATAGCACACAACAACAACGCAG TTGCATTGGGCAATGGTTATATGAGCATGGCCTGTTTTATGATGGGACGT GATGAATGGTGGTAGGTTTTGCTTAGGCACAACGCTTGTTATAGTATATT CGAACTACATGTATGGAGGTATATTTCACCGTGGTAGTGTTGCCGGGAAG AAGAGGGTGGATGTTTTTTCAAAAGATTCTTGCGTACTGCATTTACATAT TACAACCATCGTCCGAAACCAAACAACCAACCAATCACCACCAACCTCTC CCTCCCCCCCGAAAAAAAAACGAAATTTGGTACTGCTTTACATGATGGAA CCATCGTCCAAACCAAACAACCAACCAATCACCAGCAACGTCTCTCCCTC CCCACCCAAAAAAAAAAAAATGATGCCCCTACTACCGGCAGGTAAAGCAA AGCCCCCTGGGTCTCCTGAGAAGATCTCGAAGGCACGGGGGCGGGGGTGG CCTCTCCGCCCCGTCTTCCATGGGGGATCGCAATCGGACGGGCGGCGTGG CCACCATGGAGGAGGACGGCGCGGCCACTCTGCCGACCCCCCTGCTGGAG CAGCCTCAGGGGGCCCCGCCGCTGTCGGAGCTGACGGCGGACTCCCTGGC GCTCGTGCTAGACGGGCCTAGCTTGGTGAGAGATTGTTGGGTTTTGGGGG TTGATTTGTATTTTTGGGGGGGTGGTTCTGGTTGCGTGCGTGGTTGGGCG GGCGGAGGAGAGGGCGAGAGACAGAGACAGAGAGCAAGAACACTTCATAT CGGCAAAAATATTGGGTTCTTTTTTCATGTTGTAGAATACGGTTCGAAAG ATTCTATAGTTTTATAGTGTGGAATTAATTTGTAGTTAGTCTATCGCTCT TGTTGTTGATGTTGTTGTCGTTCACGGCATGAAGCACAACGGCGGCTATG CGCGGTAATTTCCCCACGTGTGCCAATACAGACCCCCGTACACCTTGCTG GCACTGATATACGTGATCCCAGGGTTTGCGTCTCAACAGAAATGACAAAA GTAGACCCCACATTTTTGTGTCTCATGGTTCTAGATCTTTCCCCCTCCCT CGCTGTTATTGATGGATGATGGATGCTAGCCAGGCCCACGGGCTTGTGCC AGTGGACACCCCGAAAACCATAGCAGAAATCATGGGTGATCCCATGGTAG GGTCTCACGGTTTCTCTCTTGCCCTCCGTGTTTTCGTCAGTGGATGATGG ATAACGATCCCAGAAGTGTACCCTCCCGATAACAGAAACCTTCGGTGATC CCATCGTAATGTCTCACGGTTTCATACCTCACCCTCCCTGTTGATCGCCG GACGTATGATGGATAAGTCTCGGCAGAAATGATGAATGTGACCCCATGGT TGTTTGTCTCATGTTTGCGTATCTTTCCCCTCCCTGTTTTTGGTCGGACG TGTGATGGATGATGGATGATAGATAACGGAGGGTGGATGGTCGATGGCGG ATTATGGCGGATGATAACATAACCAGGCCGATGTGCCCATGTCTCATGGT TTATGTCCTACCTCTCCCTCCCTCCAGGCCCACGTCCTGGGCAACCCCGA GGCGGAGCGCATGCTTCTCACGCTGGGGAGCATGTGCAAGAGCGTCATCG CGTGCCGGGTTAGCCCGGCGCAAAAGCGGCTGATCGTCCGGCTTGTGAAG AGGGGGGTGGTGCCAACACCGGTGACCCTCTCCATCGGGGACGGGGCTAA CGACGTCGGGATGATTCAGGAGGCTCAGGTAAGGAGCGAAGGGGGAGAGT TTGTTGTGTGCTTCGCGGGTACGAAGAATGTGTCTTGTGAGTTGAGTGAT TGTTGCTGTGTGTGGTGTGTGTTTCATTTGGTTTTGTAGTGATTGATTTA TTGTTTGCGTTTCGGGTAGGACATGTAGGGTAGGACGTCAGGGTGATTCA GGAGGAAGTGTATGCTCGGCAAGAAGAGCGAGTTATGTTTTTTTTTGCTT TGCTTTGCGGGTACAAAGTAGCGTAGGATGCGGCAGCAGTAGAGGTCACC ACTTGGACTCCAGGAGAAAGCGGTGATCTCCATGTCAGCGTGTGCTCTAC AAGAGCTTCGTTTCTTATTTTCTGTTTGTGGCAAGATACATCTGCTTACT GAATCTCTCAAGAATTGTCTCGACTCGATATATGATGTGTGGTGTATCAG ACACCACACACACCCACACCACATACACATACACATACATACACACACAC ACACACACACACACACATGAAACGTAGGCTGGGCCGGCGACAACCCTGCA TATCGCTCCGTCCCGGCGTGGTAGGGACGCGAGGATAATGGTCTAACGAC TGCGGGCTTTGCGTTTACACGAGTATTGCACACACACACTAGCATAGCAT GGACTCCCCCATGACCCCCCTCGCGGGGTCCCAGATCGTGGCCTTCAGAA GCATTTTGTGTTTTCAACGGCACTGAGACTGGCGTCTTTTCATTGGTCGG CCGGTTAGCCCGGTCGGTACTAACAACAAAAAATAAAACACACACGCTGC TGTTTTCCTGCAGATTGGGGTGGGCATTAGCGGGAAGGAGGGTCGGCAGG CGGTGAACAACTCCGACTTCGCCATCGCGCAGTTCCGGTTCCTGAAGAGG CTCATGCTGGTGCACGGCCACTGGGACTACCGCCGCGTGTGCAAGGTTTG TTGATGCGGGGTTGCAGGGCTTCTAGTCTCTCGATGCGCTACATGCGTGG GTCTGTTCATGTAGGGGACGATTTTCTCTCCAAATATTGGTCTAGCCATA GTACCAAAGGTCGTATTGGTATAGTGGTTTCGGGGGCAAGATGGGGCTGA AGAAGGTGACGGTCGAGCCCGTGCTACACGAAGACGACCACAAATGTACC GTAGAGGTTGCCACCAAAGCCACGTTTGCAACGTGCCCACGGCGACGCTC ACGCTGAGCTATAATAGCTCGGCCAAACACACGAGGGGGCTCCAGAACGC TATGCTAGCCTTGACCTTTGCCGTAAAACCTTTTCGACTTGGGCAGGTGA TCCTGTACAGCTTCTACAAAAACTTCGTGCTGACGTTCTGCCTCTTCTAC TTCTGCTTCTACACCGGGTTCAGCGGCCAGGTTAGTTTTGGTCTCCTGGC CTGTTCGTTTTTTCTGTCCGTGGCCATCGATGGAAAAATATGGGGATATC ATGCAGGCAACGACAGGGAATCAAAGGCCAATAAGATGAAGTACGGTGTG CGTGGGTCCCGTGCCGTAGCAGGAGGCCCGCTCGTGTCTATTGTGAATGG TTGGATCGTCTGTGTTTCTCTGGTTTAGGAATTCCTACCTTCTTTTGCCG ACACCGCTGTCGGTTGTTGTCTCGCACTGCTCGTAGTTCGAGCCGCCTCC CGACGGATTTCCGTGTGTTGTTTGGTTGCTATTGTTTTTTTTTCTATGAA GCTGCGTGTGTGTGTTTATTTATTTATTTTATTGTTATTTTCCTTTGAAA ACATTCGGCGTTTGCTCCTGCCTGGCTCCTACCTCTGTCTCGATTCATCG CGAGATGCCATGCTTGGTTTTTGGTGGAAACGCTCAATGTAGTATACGGT ACATGCCGCTTTACGGAATTCCGTCCCCATCGACCACAGAATGATACCAC ACGGCTCTGCCGCAGTCGCTGCTCAAGCCCTGCTAGAGCTCCCACTTTCT CAAGCGGTCATATCCATCCTGATGGGCACGCGGTTTCGGACCCGAGCGGC ACAGTAGCAAAGCCGCAATAACCCAAACCCGCTACGGCAGTACGTGATAT TGAAGTTGGAGGTGGTGGTGAGCACCCTTTTTCTATTTTTTCCCTCTGAA CTTGTTTTGTCGGCGCACGCGCACCCCGCTCTCTGCACCCAACCGTTTCG TGTGGTATTGACGTACCCCCCCGGCGTCGCACTCTCTTTTCTTTGACTTT TTCCTACTACCGCAAAACGTGCTCAAGTCGCTGTTCGAGTCGCTGGTGTA CTCGGGGTTCAACTTCTTCACGGCCATGCCCATCTTGCTGATCGGCATCT TCGACAAGGATGTCGGCAACCAGACGGCGACGGAGTGCCACAAGCTATAC GCCGTCGGCCGGGCCGGCATGGACCTAAACCTCAGG
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig8894:1199..5484+

>mRNA_Ecto-sp9_F_contig8894.17071.1 ID=mRNA_Ecto-sp9_F_contig8894.17071.1|Name=mRNA_Ecto-sp9_F_contig8894.17071.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1878bp|location=Sequence derived from alignment at Ecto-sp9_F_contig8894:1199..5484+ (Ectocarpus species9 EcSCA_722f female)
ATGACTCTCATCAAGTTGAAGGAGAAGGAGGGGGACCCGCAGTCTGTAGC
GAACCAGCTCAGGGCCTTGATGACCCACTTCAACAGGCTGGTGGAAGACG
ACGGGCTGGTCAAGCGCTTCTGGGGACATATGACTCTCATCAAGTTGAAG
GAGAAGGAGGGGGACCCGCAGTCTGTAGCGAACCAGCTCAGGGCCTTGAT
GACCCACTTCAACAGGCTGGTGGAAGACGACGGGCTGGTCAAGCGCTTCT
GGGGACATGTAAAGCAAAGCCCCCTGGGTCTCCTGAGAAGATCTCGAAGG
CACGGGGGCGGGGGTGGCCTCTCCGCCCCGTCTTCCATGGGGGATCGCAA
TCGGACGGGCGGCGTGGCCACCATGGAGGAGGACGGCGCGGCCACTCTGC
CGACCCCCCTGCTGGAGCAGCCTCAGGGGGCCCCGCCGCTGTCGGAGCTG
ACGGCGGACTCCCTGGCGCTCGTGCTAGACGGGCCTAGCTTGGTAAAGCA
AAGCCCCCTGGGTCTCCTGAGAAGATCTCGAAGGCACGGGGGCGGGGGTG
GCCTCTCCGCCCCGTCTTCCATGGGGGATCGCAATCGGACGGGCGGCGTG
GCCACCATGGAGGAGGACGGCGCGGCCACTCTGCCGACCCCCCTGCTGGA
GCAGCCTCAGGGGGCCCCGCCGCTGTCGGAGCTGACGGCGGACTCCCTGG
CGCTCGTGCTAGACGGGCCTAGCTTGGCCCACGTCCTGGGCAACCCCGAG
GCGGAGCGCATGCTTCTCACGCTGGGGAGCATGTGCAAGAGCGTCATCGC
GTGCCGGGTTAGCCCGGCGCAAAAGCGGCTGATCGTCCGGCTTGTGAAGA
GGGGGGTGGTGCCAACACCGGTGACCCTCTCCATCGGGGACGGGGCTAAC
GACGTCGGGATGATTCAGGAGGCTCAGGCCCACGTCCTGGGCAACCCCGA
GGCGGAGCGCATGCTTCTCACGCTGGGGAGCATGTGCAAGAGCGTCATCG
CGTGCCGGGTTAGCCCGGCGCAAAAGCGGCTGATCGTCCGGCTTGTGAAG
AGGGGGGTGGTGCCAACACCGGTGACCCTCTCCATCGGGGACGGGGCTAA
CGACGTCGGGATGATTCAGGAGGCTCAGATTGGGGTGGGCATTAGCGGGA
AGGAGGGTCGGCAGGCGGTGAACAACTCCGACTTCGCCATCGCGCAGTTC
CGGTTCCTGAAGAGGCTCATGCTGGTGCACGGCCACTGGGACTACCGCCG
CGTGTGCAAGATTGGGGTGGGCATTAGCGGGAAGGAGGGTCGGCAGGCGG
TGAACAACTCCGACTTCGCCATCGCGCAGTTCCGGTTCCTGAAGAGGCTC
ATGCTGGTGCACGGCCACTGGGACTACCGCCGCGTGTGCAAGGTGATCCT
GTACAGCTTCTACAAAAACTTCGTGCTGACGTTCTGCCTCTTCTACTTCT
GCTTCTACACCGGGTTCAGCGGCCAGGTGATCCTGTACAGCTTCTACAAA
AACTTCGTGCTGACGTTCTGCCTCTTCTACTTCTGCTTCTACACCGGGTT
CAGCGGCCAGTCGCTGTTCGAGTCGCTGGTGTACTCGGGGTTCAACTTCT
TCACGGCCATGCCCATCTTGCTGATCGGCATCTTCGACAAGGATGTCGGC
AACCAGACGGCGACGGAGTGCCACAAGCTATACGCCGTCGGCCGGGCCGG
CATGGACCTAAACCTCAGGTCGCTGTTCGAGTCGCTGGTGTACTCGGGGT
TCAACTTCTTCACGGCCATGCCCATCTTGCTGATCGGCATCTTCGACAAG
GATGTCGGCAACCAGACGGCGACGGAGTGCCACAAGCTATACGCCGTCGG
CCGGGCCGGCATGGACCTAAACCTCAGG
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