mRNA_Ecto-sp9_F_contig884.17021.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig884.17021.1
Unique NamemRNA_Ecto-sp9_F_contig884.17021.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig884.17021.1 vs.
Match: Isochorismatase (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM91_ECTSI)

HSP 1 Score: 468 bits (1203), Expect = 2.820e-166
Identity = 234/244 (95.90%), Postives = 237/244 (97.13%), Query Frame = 1
Query:    1 MAEEQKEEENGRFLESEPYKWPFDGSFSADNTAVLVIDMQVDFCAPGGYVDKMGYDISLTRGPIEPLQRVFEAARKEGFSLIHTREGHRPDLADCPANKRWRSRQIGAGIGDSGPCGRILVRGEPGWEIIPELAPAAGELVIDKPGKGAFVSTDLDMVLRTRGVRNIVLAGVTTDVCVHTTMRNANDMGYECVLLEDCCAATDPLNHAAAISMIKKQGGVFGAVSTSAALVAAMVASSKAKYSV 732
            MA+EQKEEENGRFLESEPYKWPFDGSFS DNTAVLVIDMQVDFCAPGGYVDKMGYDISLTRGPIEPLQRVFEAARKEGF LIHTREGHRPDLADCPANKRWRSRQIGAGIGDSGPCGRILVRGEPGWEIIPELAPAAGELVIDKPGKGAFV+TDLDMVLRTRGVRN+VL GVTTDVCVHTTMRNANDMGYECVLLEDCCAATDPLNHAAAISMIKKQGGVFG VSTSAALVAAMVASS A  SV
Sbjct:    1 MAKEQKEEENGRFLESEPYKWPFDGSFSTDNTAVLVIDMQVDFCAPGGYVDKMGYDISLTRGPIEPLQRVFEAARKEGFPLIHTREGHRPDLADCPANKRWRSRQIGAGIGDSGPCGRILVRGEPGWEIIPELAPAAGELVIDKPGKGAFVATDLDMVLRTRGVRNLVLTGVTTDVCVHTTMRNANDMGYECVLLEDCCAATDPLNHAAAISMIKKQGGVFG-VSTSAALVAAMVASSTATESV 243          
BLAST of mRNA_Ecto-sp9_F_contig884.17021.1 vs.
Match: Nicotinamidase-related (amidase n=1 Tax=Kaistia soli DSM 19436 TaxID=1122133 RepID=A0A1M5HYT3_9HYPH)

HSP 1 Score: 362 bits (930), Expect = 1.030e-124
Identity = 169/225 (75.11%), Postives = 196/225 (87.11%), Query Frame = 1
Query:   31 GRFLESEPYKWPFDGSFSADNTAVLVIDMQVDFCAPGGYVDKMGYDISLTRGPIEPLQRVFEAARKEGFSLIHTREGHRPDLADCPANKRWRSRQIGAGIGDSGPCGRILVRGEPGWEIIPELAPAAGELVIDKPGKGAFVSTDLDMVLRTRGVRNIVLAGVTTDVCVHTTMRNANDMGYECVLLEDCCAATDPLNHAAAISMIKKQGGVFGAVSTSAALVAAMV 705
            GR + S+PY WPFDG+   +NTA++VIDMQVDFCAPGGYVD MGYDISLTR PIEP++RV +A R +G+ +IHTREGHRPDLAD PANKRWRS++IGAGIGD GPCGRILVRGEPGWEIIPEL P  GE +IDKPGKG+FV+TDL++VLR +G+RNIVLAGVTTDVCVHTTMR+AND+GYECVLL DC AAT   NH AAI M+K QGGVFGAV+TS AL+A +V
Sbjct:   18 GRTIASDPYPWPFDGNLKPENTALIVIDMQVDFCAPGGYVDSMGYDISLTREPIEPIRRVLDAMRAKGYHIIHTREGHRPDLADLPANKRWRSQRIGAGIGDQGPCGRILVRGEPGWEIIPELQPVEGETIIDKPGKGSFVATDLELVLRQKGIRNIVLAGVTTDVCVHTTMRDANDLGYECVLLSDCTAATKRENHLAAIDMVKMQGGVFGAVATSDALIAGLV 242          
BLAST of mRNA_Ecto-sp9_F_contig884.17021.1 vs.
Match: Predicted (protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FUZ0_PHATC)

HSP 1 Score: 358 bits (918), Expect = 4.530e-123
Identity = 160/223 (71.75%), Postives = 195/223 (87.44%), Query Frame = 1
Query:   34 RFLESEPYKWPFDGSFSADNTAVLVIDMQVDFCAPGGYVDKMGYDISLTRGPIEPLQRVFEAARKEGFSLIHTREGHRPDLADCPANKRWRSRQIGAGIGDSGPCGRILVRGEPGWEIIPELAPAAGELVIDKPGKGAFVSTDLDMVLRTRGVRNIVLAGVTTDVCVHTTMRNANDMGYECVLLEDCCAATDPLNHAAAISMIKKQGGVFGAVSTSAALVAAM 702
            ++++++PY+WP++G    +NT ++VIDMQVDFC+ GGYVD MGYDISLTR PIEP+Q+V    R +G+ +IHTREGHRPDLADCP NKRWRS QIGA IG +GPCGRILVRGEPGWE+IPEL P  GE++IDKPGKG+FV T+LD++LR++G+ NI+LAGVTTDVCVHTTMRN NDMGYEC+LLEDCCAATDP NHAAAISM+KKQGGVFG+ +TS  LVAA+
Sbjct:    4 KYVDADPYRWPYNGDLRPENTCIIVIDMQVDFCSKGGYVDTMGYDISLTRAPIEPIQKVLSCMRDQGYHIIHTREGHRPDLADCPPNKRWRSAQIGAEIGSAGPCGRILVRGEPGWELIPELQPLDGEIIIDKPGKGSFVGTNLDLILRSQGIVNIILAGVTTDVCVHTTMRNGNDMGYECLLLEDCCAATDPDNHAAAISMVKKQGGVFGSCTTSDRLVAAL 226          
BLAST of mRNA_Ecto-sp9_F_contig884.17021.1 vs.
Match: Cysteine (hydrolase n=1 Tax=Cellvibrio sp. KY-GH-1 TaxID=2303332 RepID=A0A5J6PG97_9GAMM)

HSP 1 Score: 358 bits (918), Expect = 5.210e-123
Identity = 163/223 (73.09%), Postives = 190/223 (85.20%), Query Frame = 1
Query:   34 RFLESEPYKWPFDGSFSADNTAVLVIDMQVDFCAPGGYVDKMGYDISLTRGPIEPLQRVFEAARKEGFSLIHTREGHRPDLADCPANKRWRSRQIGAGIGDSGPCGRILVRGEPGWEIIPELAPAAGELVIDKPGKGAFVSTDLDMVLRTRGVRNIVLAGVTTDVCVHTTMRNANDMGYECVLLEDCCAATDPLNHAAAISMIKKQGGVFGAVSTSAALVAAM 702
            R+L S PYKWP+DG    DNTA+++IDMQ DFC  GGYVD MGYDI+LTR PIEPL+++  A R  GF +IHTREGHRPDLAD PANKRWRSRQIGAGIGD+GPCG+IL+RGEPGWEIIPELAP  GE++IDKPGKG+F +TDL+MVL  RG++NI+L G+TTDVCVHTTMR AND G+ECVLL DCCAATDP NH AAI+MI  QGGVFGAV+TS  L+AA+
Sbjct:   10 RYLNSTPYKWPYDGDLQPDNTALIIIDMQTDFCGKGGYVDTMGYDINLTRAPIEPLRKLLPAMRAAGFHIIHTREGHRPDLADLPANKRWRSRQIGAGIGDAGPCGKILIRGEPGWEIIPELAPIEGEIIIDKPGKGSFYATDLEMVLHLRGIKNIILTGITTDVCVHTTMREANDRGFECVLLADCCAATDPANHNAAIAMIHMQGGVFGAVATSTELLAAL 232          
BLAST of mRNA_Ecto-sp9_F_contig884.17021.1 vs.
Match: Cysteine (hydrolase falmily protein n=23 Tax=Herbaspirillum TaxID=963 RepID=D8IPA6_HERSS)

HSP 1 Score: 355 bits (910), Expect = 7.750e-122
Identity = 164/226 (72.57%), Postives = 195/226 (86.28%), Query Frame = 1
Query:   28 NGRFLESEPYKWPFDGSFSADNTAVLVIDMQVDFCAPGGYVDKMGYDISLTRGPIEPLQRVFEAARKEGFSLIHTREGHRPDLADCPANKRWRSRQIGA---GIGDSGPCGRILVRGEPGWEIIPELAPAAGELVIDKPGKGAFVSTDLDMVLRTRGVRNIVLAGVTTDVCVHTTMRNANDMGYECVLLEDCCAATDPLNHAAAISMIKKQGGVFGAVSTSAALVA 696
            + RF+++EPY WP+DG+ +  NTA++VIDMQ DFC  GGYVDKMGYD+SLTR PIEP+++V  A R  G+++IHTREGHRPDL+D PANKRWRSRQIGA   GIGD+GPCGRILVRGEPGWEIIPELAP AGE++IDKPGKG+F +TDL+M+L TRG+RNIVL G+TTDVCVHTTMR AND G+ECV+L DCC ATD  NH AA+SMIK QGGVFGAV+ SAAL+A
Sbjct:    2 SARFIQAEPYPWPYDGALTPANTALIVIDMQTDFCGIGGYVDKMGYDLSLTRAPIEPIRKVLAAMRAGGYTIIHTREGHRPDLSDLPANKRWRSRQIGANGVGIGDAGPCGRILVRGEPGWEIIPELAPIAGEIIIDKPGKGSFCATDLEMILHTRGIRNIVLTGITTDVCVHTTMREANDRGFECVMLSDCCGATDYNNHLAALSMIKMQGGVFGAVADSAALIA 227          
BLAST of mRNA_Ecto-sp9_F_contig884.17021.1 vs.
Match: Cysteine (hydrolase n=13 Tax=Pseudomonadales TaxID=72274 RepID=A0A2D9VWQ7_PSESP)

HSP 1 Score: 354 bits (908), Expect = 1.460e-121
Identity = 157/220 (71.36%), Postives = 191/220 (86.82%), Query Frame = 1
Query:   34 RFLESEPYKWPFDGSFSADNTAVLVIDMQVDFCAPGGYVDKMGYDISLTRGPIEPLQRVFEAARKEGFSLIHTREGHRPDLADCPANKRWRSRQIGAGIGDSGPCGRILVRGEPGWEIIPELAPAAGELVIDKPGKGAFVSTDLDMVLRTRGVRNIVLAGVTTDVCVHTTMRNANDMGYECVLLEDCCAATDPLNHAAAISMIKKQGGVFGAVSTSAALV 693
            R+L+S PY WP++G+ + +NTA++VIDMQ DFC  GGYVD MGYD+SLTR PIEP+ RV E  R++GF +IHTREGHRPDL+D PANKRWRS++IGAGIGD+GPCGRILVRGEPGWEIIPELAP  GE++IDKPGKG+F +TDL+++LRTRG+ NI+LAG+TTDVCVHTTMR AND G+EC+LLEDCC ATD  NH AA+SM+K QGGVFGA+  SA L+
Sbjct:    4 RYLQSAPYPWPYNGNLTPENTALIVIDMQTDFCGKGGYVDSMGYDLSLTRAPIEPISRVLEVLREQGFWIIHTREGHRPDLSDLPANKRWRSQRIGAGIGDTGPCGRILVRGEPGWEIIPELAPIDGEIIIDKPGKGSFCATDLELILRTRGIENIILAGITTDVCVHTTMREANDRGFECILLEDCCGATDHANHLAALSMVKMQGGVFGAIGDSAMLI 223          
BLAST of mRNA_Ecto-sp9_F_contig884.17021.1 vs.
Match: Cysteine (hydrolase n=4 Tax=Rhodocyclales TaxID=206389 RepID=A0A4Y6KYP2_9RHOO)

HSP 1 Score: 353 bits (905), Expect = 3.880e-121
Identity = 163/221 (73.76%), Postives = 193/221 (87.33%), Query Frame = 1
Query:   40 LESEPYKWPFDGSFSADNTAVLVIDMQVDFCAPGGYVDKMGYDISLTRGPIEPLQRVFEAARKEGFSLIHTREGHRPDLADCPANKRWRSRQIGAGIGDSGPCGRILVRGEPGWEIIPELAPAAGELVIDKPGKGAFVSTDLDMVLRTRGVRNIVLAGVTTDVCVHTTMRNANDMGYECVLLEDCCAATDPLNHAAAISMIKKQGGVFGAVSTSAALVAAM 702
            L+++PY WP++G  +  NTA+++IDMQ DFC  GGYVDKMGYD+SLTR PIEP+ RV    R++GF +IHTREGHRPDLAD PANKRWRS++IGAGIGD GPCGRILVRGEPGWEIIPELAP AGE+VIDKPGKG+F +TDL++VLRTRG+RNIVL G+TTDVCVHTTMR+ANDMG+EC+LLEDCC ATD  NH AAI MIK QGGVFGAV+ S+ L+AA+
Sbjct:    6 LDADPYPWPWNGDLTPANTALVIIDMQTDFCGVGGYVDKMGYDLSLTRAPIEPIGRVLATMRRKGFFIIHTREGHRPDLADLPANKRWRSQRIGAGIGDPGPCGRILVRGEPGWEIIPELAPLAGEVVIDKPGKGSFYATDLELVLRTRGIRNIVLTGITTDVCVHTTMRDANDMGFECLLLEDCCGATDHGNHLAAIKMIKMQGGVFGAVADSSTLLAAL 226          
BLAST of mRNA_Ecto-sp9_F_contig884.17021.1 vs.
Match: Cysteine (hydrolase n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=UPI0019B7C4C5)

HSP 1 Score: 352 bits (903), Expect = 7.830e-121
Identity = 161/220 (73.18%), Postives = 187/220 (85.00%), Query Frame = 1
Query:   34 RFLESEPYKWPFDGSFSADNTAVLVIDMQVDFCAPGGYVDKMGYDISLTRGPIEPLQRVFEAARKEGFSLIHTREGHRPDLADCPANKRWRSRQIGAGIGDSGPCGRILVRGEPGWEIIPELAPAAGELVIDKPGKGAFVSTDLDMVLRTRGVRNIVLAGVTTDVCVHTTMRNANDMGYECVLLEDCCAATDPLNHAAAISMIKKQGGVFGAVSTSAALV 693
            R++ ++PY WP++G    +NT V+VIDMQ DFC PGGYVDKMGYD+SLTR PIEP++RV  AAR  GF +IHTREGHRPDL+D PANKRWRS++IGAGIGD+GPCGRIL RGEPGWEIIPELAP  GE +IDKPGKG+F +TDLDM+LR +G++NI L G+TTDVCVHTTMR AND GYECVLLEDC  ATDP NHAAA+ MIK QGGVFGAV+TS A V
Sbjct:    3 RYVPADPYAWPYNGDLRPENTVVVVIDMQTDFCGPGGYVDKMGYDLSLTRAPIEPIKRVLAAARAGGFHIIHTREGHRPDLSDLPANKRWRSQRIGAGIGDAGPCGRILTRGEPGWEIIPELAPLPGEAIIDKPGKGSFYATDLDMLLRGKGIKNIALCGITTDVCVHTTMREANDRGYECVLLEDCTGATDPGNHAAALKMIKMQGGVFGAVATSVAFV 222          
BLAST of mRNA_Ecto-sp9_F_contig884.17021.1 vs.
Match: Cysteine (hydrolase n=1 Tax=Burkholderiales bacterium RIFCSPLOWO2_02_FULL_57_36 TaxID=1797562 RepID=A0A1F4JHK8_9BURK)

HSP 1 Score: 352 bits (903), Expect = 8.400e-121
Identity = 163/223 (73.09%), Postives = 192/223 (86.10%), Query Frame = 1
Query:   34 RFLESEPYKWPFDGSFSADNTAVLVIDMQVDFCAPGGYVDKMGYDISLTRGPIEPLQRVFEAARKEGFSLIHTREGHRPDLADCPANKRWRSRQIGAGIGDSGPCGRILVRGEPGWEIIPELAPAAGELVIDKPGKGAFVSTDLDMVLRTRGVRNIVLAGVTTDVCVHTTMRNANDMGYECVLLEDCCAATDPLNHAAAISMIKKQGGVFGAVSTSAALVAAM 702
            ++L ++PY WP+D S +  NTA+++IDMQ DFC  GGYVDKMGYD+SLTRGPI P++ V  A R++GF +IHTREGHRPDL+D PANKRWRSR+IGAGIGD GPCGRILVRGEPGWEII ELAP AGE++IDKPGKG+F +TDL+MVL TRG+RNIVL G+TTDVCVHTTMR+AND G+ECVLLEDCC ATD  NH AAI+MIK QGGVFGAVS S  L+AA+
Sbjct:    4 KYLNADPYPWPYDSSLAPHNTALVIIDMQTDFCGIGGYVDKMGYDLSLTRGPIAPIKAVLAAMREQGFQIIHTREGHRPDLSDLPANKRWRSRRIGAGIGDEGPCGRILVRGEPGWEIIDELAPLAGEVIIDKPGKGSFYATDLEMVLHTRGIRNIVLTGITTDVCVHTTMRDANDRGFECVLLEDCCGATDIGNHHAAINMIKMQGGVFGAVSDSKKLLAAL 226          
BLAST of mRNA_Ecto-sp9_F_contig884.17021.1 vs.
Match: Cysteine (hydrolase n=1 Tax=Terrihabitans soli TaxID=708113 RepID=A0A6S6QP35_9HYPH)

HSP 1 Score: 352 bits (902), Expect = 1.820e-120
Identity = 166/224 (74.11%), Postives = 190/224 (84.82%), Query Frame = 1
Query:   31 GRFLESEPYKWPFDGSFSADNTAVLVIDMQVDFCAPGGYVDKMGYDISLTRGPIEPLQRVFEAARKEGFSLIHTREGHRPDLADCPANKRWRSRQIGAGIGDSGPCGRILVRGEPGWEIIPELAPAAGELVIDKPGKGAFVSTDLDMVLRTRGVRNIVLAGVTTDVCVHTTMRNANDMGYECVLLEDCCAATDPLNHAAAISMIKKQGGVFGAVSTSAALVAAM 702
            G+ + S+PY WPFDG    DNTA++VIDMQVDFCAPGGYVD MGYDISLTR PI+P+Q V  A R+ G+ +IHTREGHRPDLAD PANKRWRS++IGAGIGD GPCGRILVRGEPGWEIIPEL P   E+VIDKPGKG+FV+TDL++VL+TR +RNIVL GVTTDVCVHTTMR+ANDMGYEC+LL DC AAT   NH AAI MIK QGGVFGAV+TS  L+ A+
Sbjct:   17 GKTIASDPYPWPFDGDLRPDNTALIVIDMQVDFCAPGGYVDVMGYDISLTRAPIKPIQNVLAAMRRGGYHIIHTREGHRPDLADLPANKRWRSQRIGAGIGDQGPCGRILVRGEPGWEIIPELQPEKDEIVIDKPGKGSFVATDLELVLKTRRIRNIVLTGVTTDVCVHTTMRDANDMGYECLLLSDCTAATKVENHLAAIDMIKMQGGVFGAVATSDVLIEAI 240          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig884.17021.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Isochorismatase2.820e-16695.90domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
Nicotinamidase-related1.030e-12475.11amidase n=1 Tax=Kaistia soli DSM 19436 TaxID=11221... [more]
Predicted4.530e-12371.75protein n=2 Tax=Phaeodactylum tricornutum TaxID=28... [more]
Cysteine5.210e-12373.09hydrolase n=1 Tax=Cellvibrio sp. KY-GH-1 TaxID=230... [more]
Cysteine7.750e-12272.57hydrolase falmily protein n=23 Tax=Herbaspirillum ... [more]
Cysteine1.460e-12171.36hydrolase n=13 Tax=Pseudomonadales TaxID=72274 Rep... [more]
Cysteine3.880e-12173.76hydrolase n=4 Tax=Rhodocyclales TaxID=206389 RepID... [more]
Cysteine7.830e-12173.18hydrolase n=1 Tax=Burkholderiales bacterium TaxID=... [more]
Cysteine8.400e-12173.09hydrolase n=1 Tax=Burkholderiales bacterium RIFCSP... [more]
Cysteine1.820e-12074.11hydrolase n=1 Tax=Terrihabitans soli TaxID=708113 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig884contigEcto-sp9_F_contig884:24166..27026 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score470.7
Seed ortholog evalue4.2e-130
Seed eggNOG ortholog2880.D8LM91
EggNOG free text desc.Isochorismatase family
EggNOG OGs28KWI@1,2QTD4@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionIsochorismatase-like
Ec32 orthologEc-05_001940.1
Exons5
Model size738
Cds size738
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig884.17021.1prot_Ecto-sp9_F_contig884.17021.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig884 24166..27026 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930936.0966966-CDS-Ecto-sp9_F_contig884:24165..243151622930936.0966966-CDS-Ecto-sp9_F_contig884:24165..24315Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig884 24166..24315 -
1692278956.7675955-CDS-Ecto-sp9_F_contig884:24165..243151692278956.7675955-CDS-Ecto-sp9_F_contig884:24165..24315Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig884 24166..24315 -
1622930936.1158593-CDS-Ecto-sp9_F_contig884:24977..250941622930936.1158593-CDS-Ecto-sp9_F_contig884:24977..25094Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig884 24978..25094 -
1692278956.783449-CDS-Ecto-sp9_F_contig884:24977..250941692278956.783449-CDS-Ecto-sp9_F_contig884:24977..25094Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig884 24978..25094 -
1622930936.1298692-CDS-Ecto-sp9_F_contig884:25405..255231622930936.1298692-CDS-Ecto-sp9_F_contig884:25405..25523Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig884 25406..25523 -
1692278956.7939403-CDS-Ecto-sp9_F_contig884:25405..255231692278956.7939403-CDS-Ecto-sp9_F_contig884:25405..25523Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig884 25406..25523 -
1622930936.1442568-CDS-Ecto-sp9_F_contig884:26076..262681622930936.1442568-CDS-Ecto-sp9_F_contig884:26076..26268Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig884 26077..26268 -
1692278956.804386-CDS-Ecto-sp9_F_contig884:26076..262681692278956.804386-CDS-Ecto-sp9_F_contig884:26076..26268Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig884 26077..26268 -
1622930936.1598172-CDS-Ecto-sp9_F_contig884:26865..270261622930936.1598172-CDS-Ecto-sp9_F_contig884:26865..27026Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig884 26866..27026 -
1692278956.8139024-CDS-Ecto-sp9_F_contig884:26865..270261692278956.8139024-CDS-Ecto-sp9_F_contig884:26865..27026Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig884 26866..27026 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig884.17021.1

>prot_Ecto-sp9_F_contig884.17021.1 ID=prot_Ecto-sp9_F_contig884.17021.1|Name=mRNA_Ecto-sp9_F_contig884.17021.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=246bp
MAEEQKEEENGRFLESEPYKWPFDGSFSADNTAVLVIDMQVDFCAPGGYV
DKMGYDISLTRGPIEPLQRVFEAARKEGFSLIHTREGHRPDLADCPANKR
WRSRQIGAGIGDSGPCGRILVRGEPGWEIIPELAPAAGELVIDKPGKGAF
VSTDLDMVLRTRGVRNIVLAGVTTDVCVHTTMRNANDMGYECVLLEDCCA
ATDPLNHAAAISMIKKQGGVFGAVSTSAALVAAMVASSKAKYSVN*
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mRNA from alignment at Ecto-sp9_F_contig884:24166..27026-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig884.17021.1 ID=mRNA_Ecto-sp9_F_contig884.17021.1|Name=mRNA_Ecto-sp9_F_contig884.17021.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=2861bp|location=Sequence derived from alignment at Ecto-sp9_F_contig884:24166..27026- (Ectocarpus species9 EcSCA_722f female)
ATGGCCGAGGAACAGAAGGAAGAGGAGAACGGGCGCTTCCTGGAGAGCGA GCCTTACAAGTGGCCGTTCGACGGCAGCTTCAGCGCGGACAACACCGCGG TCCTCGTCATCGACATGCAAGTCGACTTCTGCGCTCCCGGCGGATACGTC GACAAGATGGGGTGAGCGCTGTTGGCGGGTGGTGGTCAAGTATGTGGCGG CAGGATAGAGCAGCCGAGAAAGCTGGTGTTGGCTTCACTTTTGTTCATGG CTCTCCCCCCATGACGTCGCACGATTGGTACGGGTGAATACGATTTTCGC CTTCCGTATGGACATGACATCTTGGGAGGCAATCATGCCGTGACATGCAA GGGCAGGTCGGCAATAATGGAGTACCACAGCCGGGTCAAGGGGGGCTACT ATTCGTGCCCGAATAGTCTGCCTTGCTTGCAGATCATCCGCGTATCGAAA GAAAAACGTGGGGGCCGTCCAGTAGCACGCGCCGACGCCTACCGTAGGTG ACGCAAGATACCACACCCCTCGGATCGTTTTTTCAAAGCTCGAATTCTTC ACTACAGAAACAGTGGTGATGTCGATAAAAAGGCGGTGTCGGACCCGTCG TCTTGTTCGGGAGCTATTCCGAAGACGGGAGCTATTCCGAAGACGCATCG CTTGACATATAAATCTTCTTCGTCGTGGAGTAATCGACAATCGATCCGGG GGGCGTGGTATCTTGCGTCACGTGCGGTAATCTGAACCCGACTCCATCGC TCCGTCAGGTACGACATCTCGCTGACTCGGGGCCCGATAGAGCCCCTCCA GCGGGTGTTCGAGGCTGCCCGGAAGGAGGGGTTTTCCCTGATACACACGA GGGAGGGGCACCGGCCCGATCTCGCCGACTGCCCGGCCAACAAGAGGTGG AGAAGCCGGCAGATCGGGGCCGGTATCGGGGACAGCGGCCCGTGCGGCAG GTGGGTTAGGGAAGCACAGTCGACGACGTGCCGAACGAACCCTGCCCGTA CACTCAGCCCTTCTGGAGGCCCATGCCATCGTCCTCAGAATTGGCGATAG CATCCTCAGAATGGGCGACAACTGCTCCTTTTCGGAAGCTGGCAGGCTGT AGCTCCGTTATTTGCGCAGACGATGCACTGCTCGGTTGAGCTGTGCTCGC AGTATATCAGACTCTTTGTTCGATTTCGGCTAGCTAGACTACAGCAGCAG ACGTTCGTTTCGTTTCGCCGTGCGGCGATCGTGAGATAATAGAGTCCTAT TGAGTAAGGGACGAGCCTGGGTGGGAACTCATCCGGGGCTGCTGTACCCG AGAAACTATTTTGGTTGGATATGCGGCTGAACTAGTACTACCACAGCAGA TGTTCTCTTTGTTCGCTTTGCGGTTATCTGTTGATAGGATCCTAGTGATG GGTAAACCCGGGAGGGAAACCATCCCGGAGAGTAGCTGTATCCGAGTAGA ATCTCTCTCGGCAAATATCGTGTTTCTTTCGCTTCGCGACGACCCTTTAC CAGGATCCTGGTGAGGGGCGAGCCTGGGTGGGAAATCATTCCGGAGCTAG CTCCAGCGGCGGGGGAACTGGTGATCGACAAGCCCGGAAAGGGTGCTTTC GTTTCCACAGACCTTGACATGGTGAGCTTGTACAGCAGCCGCTTACTCTA AATATGTGTTTACAGCTAAGCCTTGGATCTCGCGCGGATTATCCGACACT TGTACTGGATAAAAAATCCGTGGGGAACGGCGCGTTTCACATTGTTAGCT TTCGGACGTCATGGTGGTTTCTATATCCCGATCCTCGTTCTACAAAGCAG ATTGTTGTGTAGAAGTGGGTTTGTGTGGTCAAAGGTCGCGATGGTTTTGC TCAGCCCCCTCGTTTCCTTGCTATTCTCTCCTTCCTCTCTGTCGTCTCGA TCTCAACACCAACTACCGCCTACAACGACAAGGTTCTTCGGACGAGAGGG GTGCGGAACATCGTCCTGGCCGGAGTTACCACCGACGTTTGTGTGCACAC CACGATGCGGAACGCCAATGACATGGGCTACGAGTGCGTTCTCCTTGAGG TGCGTGTGTGAGGAGTACGCCGCGGTATCAGAAATGCGCGGATCGTGATA AAAAAACGATCATATCTGTGCATGTCAGGAACACTCGGCCACGTAGGTGC CTGTGTGTGCTCGAGAGTATTTTTCGCGTTCTAGAAGACAAGATACCGAA CTTGAGATTTCGTCCTGTGACACGCTTCCACATAATGAGTGATTTTCTAT GTCAACTAGGTCCTGGCAACTCATTCCCGACCTGCTCCGCTTTATCATAG CAAATAACTCAATCAAACTCGTTGAGGCCTGTCCTGTGACAGGTAGTTGC ACGTAGTACGTGATTCGCTATATCGAATACGTAGATCGAACGAGATCTTG TCATGTGACAGGTGTTCGTGATTTTGCCACACGCGCCGTCTCACAATCAG AATTGTGTTCGCCTGCACTCAAAAAAATCATCCCGCCGTTACCGGCTCCC ACGATTGATGCCGCTCTGTCACCCCCGGCCCCACCGATCGCTTGTACACA CTCTGCGGATGAATCACCCCTCTCGGTGAGAGCGAGCGCCCAAGACGGAC TTGACCACACCGCCGCCGCCACTGCCCCTCATCTTTCGCCTCCCCCCCCC CCCCCCCCCCCCCCCCCCCCGCCCCATCTTCTTGGATGCACCGAAACGCG ACGCGCCTTAGGATTGCTGCGCTGCAACCGATCCCCTCAACCACGCTGCA GCGATTTCGATGATCAAGAAACAGGGCGGCGTGTTCGGCGCAGTGTCGAC TTCGGCGGCCCTGGTCGCAGCCATGGTTGCCAGCAGCAAAGCGAAGTACA GCGTGAATTAG
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig884:24166..27026-

>mRNA_Ecto-sp9_F_contig884.17021.1 ID=mRNA_Ecto-sp9_F_contig884.17021.1|Name=mRNA_Ecto-sp9_F_contig884.17021.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1476bp|location=Sequence derived from alignment at Ecto-sp9_F_contig884:24166..27026- (Ectocarpus species9 EcSCA_722f female)
ATGGCCGAGGAACAGAAGGAAGAGGAGAACGGGCGCTTCCTGGAGAGCGA
GCCTTACAAGTGGCCGTTCGACGGCAGCTTCAGCGCGGACAACACCGCGG
TCCTCGTCATCGACATGCAAGTCGACTTCTGCGCTCCCGGCGGATACGTC
GACAAGATGGGATGGCCGAGGAACAGAAGGAAGAGGAGAACGGGCGCTTC
CTGGAGAGCGAGCCTTACAAGTGGCCGTTCGACGGCAGCTTCAGCGCGGA
CAACACCGCGGTCCTCGTCATCGACATGCAAGTCGACTTCTGCGCTCCCG
GCGGATACGTCGACAAGATGGGGTACGACATCTCGCTGACTCGGGGCCCG
ATAGAGCCCCTCCAGCGGGTGTTCGAGGCTGCCCGGAAGGAGGGGTTTTC
CCTGATACACACGAGGGAGGGGCACCGGCCCGATCTCGCCGACTGCCCGG
CCAACAAGAGGTGGAGAAGCCGGCAGATCGGGGCCGGTATCGGGGACAGC
GGCCCGTGCGGCAGGTACGACATCTCGCTGACTCGGGGCCCGATAGAGCC
CCTCCAGCGGGTGTTCGAGGCTGCCCGGAAGGAGGGGTTTTCCCTGATAC
ACACGAGGGAGGGGCACCGGCCCGATCTCGCCGACTGCCCGGCCAACAAG
AGGTGGAGAAGCCGGCAGATCGGGGCCGGTATCGGGGACAGCGGCCCGTG
CGGCAGGATCCTGGTGAGGGGCGAGCCTGGGTGGGAAATCATTCCGGAGC
TAGCTCCAGCGGCGGGGGAACTGGTGATCGACAAGCCCGGAAAGGGTGCT
TTCGTTTCCACAGACCTTGACATGGATCCTGGTGAGGGGCGAGCCTGGGT
GGGAAATCATTCCGGAGCTAGCTCCAGCGGCGGGGGAACTGGTGATCGAC
AAGCCCGGAAAGGGTGCTTTCGTTTCCACAGACCTTGACATGGTTCTTCG
GACGAGAGGGGTGCGGAACATCGTCCTGGCCGGAGTTACCACCGACGTTT
GTGTGCACACCACGATGCGGAACGCCAATGACATGGGCTACGAGTGCGTT
CTCCTTGAGGTTCTTCGGACGAGAGGGGTGCGGAACATCGTCCTGGCCGG
AGTTACCACCGACGTTTGTGTGCACACCACGATGCGGAACGCCAATGACA
TGGGCTACGAGTGCGTTCTCCTTGAGGATTGCTGCGCTGCAACCGATCCC
CTCAACCACGCTGCAGCGATTTCGATGATCAAGAAACAGGGCGGCGTGTT
CGGCGCAGTGTCGACTTCGGCGGCCCTGGTCGCAGCCATGGTTGCCAGCA
GCAAAGCGAAGTACAGCGTGAATTAGGATTGCTGCGCTGCAACCGATCCC
CTCAACCACGCTGCAGCGATTTCGATGATCAAGAAACAGGGCGGCGTGTT
CGGCGCAGTGTCGACTTCGGCGGCCCTGGTCGCAGCCATGGTTGCCAGCA
GCAAAGCGAAGTACAGCGTGAATTAG
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