mRNA_Ecto-sp9_F_contig11085.940.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig11085.940.1
Unique NamemRNA_Ecto-sp9_F_contig11085.940.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig11085.940.1 vs.
Match: DNA-directed (RNA polymerase subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9Y2_9PHAE)

HSP 1 Score: 751 bits (1938), Expect = 1.090e-257
Identity = 386/393 (98.22%), Postives = 391/393 (99.49%), Query Frame = 1
Query:    1 INRQVGPGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLEERAAGADEAEGQEVAKRVVDILEYVTLGDITTSTQIYYDPDPRSTVVDEDVELLEGHFDIQEEEEDDKDTDRARPWLLRMELNREAVFDKRLDVVEIAKRVVAYFDGGLHVIRSDQNSEKLVLRIRVLDDVPDKIEAEPEAEDTAEADDVAMLKHLEKNLLRLQLSGIAGISKVYMSEVSKPKFDEINGFAQRHKEWVLETDGTNLMAALCAEQIDPRRTVSNDVVECCTVLGIEGARGSLLKEFRAVVERDGSYVNYRHLSTLIDVMTFRGHLMAITRHGINRVDNGPMLRSSFEETVEILMEAAVFAEADNLKGVTDNIMLGQ 1179
            ++ +VGPGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLEERAAGADEAEGQEVAKRVVDILEYVTLGDITTSTQIYYDPDPRSTVVDEDVELLEGHFDIQEEEEDDKDTDRARPWLLRMELNREAVFDKRLDVVEIAKRVVAYFDGGLHVIRSDQNSEKLVLRIRVLDDVPDK EAEPEAEDTAEADDVAMLKHLEKNLLRLQLSGIAGISKVYMSEV+KP+FDEINGFAQRHKEWVLETDGTNLMAALCAEQIDPRRTVSNDVVECCTVLGIEGARGSLLKEFRAVVERDGSYVNYRHLSTLIDVMTFRGHLMAITRHGINRVDNGPMLRSSFEETVEILMEAAVFAEADNLKGVTDNIMLGQ
Sbjct: 1113 MSSKVGPGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLEERAAGADEAEGQEVAKRVVDILEYVTLGDITTSTQIYYDPDPRSTVVDEDVELLEGHFDIQEEEEDDKDTDRARPWLLRMELNREAVFDKRLDVVEIAKRVVAYFDGGLHVIRSDQNSEKLVLRIRVLDDVPDKTEAEPEAEDTAEADDVAMLKHLEKNLLRLQLSGIAGISKVYMSEVTKPRFDEINGFAQRHKEWVLETDGTNLMAALCAEQIDPRRTVSNDVVECCTVLGIEGARGSLLKEFRAVVERDGSYVNYRHLSTLIDVMTFRGHLMAITRHGINRVDNGPMLRSSFEETVEILMEAAVFAEADNLKGVTDNIMLGQ 1505          
BLAST of mRNA_Ecto-sp9_F_contig11085.940.1 vs.
Match: DNA-directed (RNA polymerase subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRY3_ECTSI)

HSP 1 Score: 751 bits (1940), Expect = 6.770e-254
Identity = 387/393 (98.47%), Postives = 391/393 (99.49%), Query Frame = 1
Query:    1 INRQVGPGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLEERAAGADEAEGQEVAKRVVDILEYVTLGDITTSTQIYYDPDPRSTVVDEDVELLEGHFDIQEEEEDDKDTDRARPWLLRMELNREAVFDKRLDVVEIAKRVVAYFDGGLHVIRSDQNSEKLVLRIRVLDDVPDKIEAEPEAEDTAEADDVAMLKHLEKNLLRLQLSGIAGISKVYMSEVSKPKFDEINGFAQRHKEWVLETDGTNLMAALCAEQIDPRRTVSNDVVECCTVLGIEGARGSLLKEFRAVVERDGSYVNYRHLSTLIDVMTFRGHLMAITRHGINRVDNGPMLRSSFEETVEILMEAAVFAEADNLKGVTDNIMLGQ 1179
            ++ +VGPGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLEERAAGADEAEGQEVAKRVVDILEYVTLGDITTSTQIYYDPDPRSTVVDEDVELLEGHFDIQEEEEDDKDTDRARPWLLRMELNREAVFDKRLDVVEIAKRVVAYFDGGLHVIRSDQNSEKLVLRIRVLDDVPDKIEAEPEAED AEADDVAMLKHLEKNLLRLQLSGIAGISKVYMSEV+KPKFDEINGFAQRHKEWVLETDGTNLMAALCAEQIDPRRTVSNDVVECCTVLGIEGARGSLLKEFRAVVERDGSYVNYRHLSTLIDVMTFRGHLMAITRHGINRVDNGPMLRSSFEETVEILMEAAVFAEADNLKGVTDNIMLGQ
Sbjct: 1112 MSSKVGPGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLEERAAGADEAEGQEVAKRVVDILEYVTLGDITTSTQIYYDPDPRSTVVDEDVELLEGHFDIQEEEEDDKDTDRARPWLLRMELNREAVFDKRLDVVEIAKRVVAYFDGGLHVIRSDQNSEKLVLRIRVLDDVPDKIEAEPEAEDMAEADDVAMLKHLEKNLLRLQLSGIAGISKVYMSEVTKPKFDEINGFAQRHKEWVLETDGTNLMAALCAEQIDPRRTVSNDVVECCTVLGIEGARGSLLKEFRAVVERDGSYVNYRHLSTLIDVMTFRGHLMAITRHGINRVDNGPMLRSSFEETVEILMEAAVFAEADNLKGVTDNIMLGQ 1504          
BLAST of mRNA_Ecto-sp9_F_contig11085.940.1 vs.
Match: DNA-directed (RNA polymerase subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHC4_9STRA)

HSP 1 Score: 510 bits (1314), Expect = 1.030e-163
Identity = 272/394 (69.04%), Postives = 312/394 (79.19%), Query Frame = 1
Query:    1 INRQVGPGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLEERAAGADEAEGQEVAKRVVDILEYVTLGDITTSTQIYYDPDPRSTVVDEDVELLEGHFDIQEEEEDDKDTDRARPWLLRMELNREAVFDKRLDVVEIAKRVVAYFDGGLHVIRSDQNSEKLVLRIRVLDDVPDKIEAEPEA-EDTAEADDVAMLKHLEKNLLRLQLSGIAGISKVYMSEVSKPKFDEINGFAQRHKEWVLETDGTNLMAALCAEQIDPRRTVSNDVVECCTVLGIEGARGSLLKEFRAVVERDGSYVNYRHLSTLIDVMTFRGHLMAITRHGINRVDNGPMLRSSFEETVEILMEAAVFAEADNLKGVTDNIMLGQ 1179
            ++ +V  GEMCGVLAAQSIGEPITQMTLNTFH+AGVSAKNVTLGVPRVKEIINVA N RTPSLTIYL       D  + QE AKRVVD+LEY+TL D+T STQIYYDPDPR T+++ED E +E   DI   E DD + DRA PWLLR+EL +E  F K L +  IA+++   +   LH+I SD N++K VLR+RV+DD  D  + +P + E+   ADDVA LK LEKNLL LQL GI  I+KVYM E ++P FD   GF QR  EW+LETDGTNLMA LC   +D RRTVSNDVVEC +V GIEGAR SLL+EFRAVVERDGSYVNYRHL TL+DVMTFRG+LMAITRHGINRVDNGPMLRSSFEETVEILMEAA+FAE+DNLKGVTDNIMLGQ
Sbjct: 1104 MSARVSAGEMCGVLAAQSIGEPITQMTLNTFHYAGVSAKNVTLGVPRVKEIINVAANPRTPSLTIYL-----SPDSEQDQESAKRVVDMLEYITLADVTVSTQIYYDPDPRDTIIEEDKECVEAFLDI---ETDDFNADRASPWLLRIELKKEVAFVKGLMIGSIARKITDDYGSALHIISSDDNADKQVLRLRVMDD-DDGEKVDPSSGEEVVRADDVAFLKRLEKNLLVLQLGGIDNINKVYMQEGTRPVFDPDKGF-QRETEWLLETDGTNLMAVLCCPNVDHRRTVSNDVVECLSVFGIEGARMSLLREFRAVVERDGSYVNYRHLGTLVDVMTFRGYLMAITRHGINRVDNGPMLRSSFEETVEILMEAAMFAESDNLKGVTDNIMLGQ 1487          
BLAST of mRNA_Ecto-sp9_F_contig11085.940.1 vs.
Match: DNA-directed (RNA polymerase n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AD01_9STRA)

HSP 1 Score: 404 bits (1039), Expect = 1.570e-133
Identity = 219/391 (56.01%), Postives = 282/391 (72.12%), Query Frame = 1
Query:   13 VGPGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLEERAAGADEAEGQEVAKRVVDILEYVTLGDITTSTQIYYDPDPRSTVVDEDVELLEGHFDIQEEEEDDKDTDRAR-PWLLRMELNREAVFDKRLDVVEIAKRVVAYFDGGLHVIRSDQNSEKLVLRIRVLDDVPDKIEAEPEAEDTAEADDVAMLKHLEKNLL-RLQLSGIAGISKVYMSEVSKPKFDEINGFAQRHKEWVLETDGTNLMAALCAEQIDPRRTVSNDVVECCTVLGIEGARGSLLKEFRAVVERDGSYVNYRHLSTLIDVMTFRGHLMAITRHGINRVDNGPMLRSSFEETVEILMEAAVFAEADNLKGVTDNIMLGQ 1179
            V  GEM GV+AAQSIGEP TQMTLNTFH+AGVSAKNVTLGVPR+KEIIN+AK+V+TPS+ IYL+      D A   E AK++   LEY TL D+T ST IYYDPDP STVV+ED + +  ++D+      D+DT  AR PWLLR+ELNR  + DK L++ EIA ++   +   L  I +D N++KLVLRIR++ +  DK+     A  +   +D   LK +E N+L +++L G+  + KV+M E  + ++DE  GF    KEWVL+TDGTNL+  +C E ID  RT+SND+VE   VLGIE  R +LL E R V+  DG+YVNYRHL+ L DVMTFRGHLMA+TRHGINRVD+GP++R SFEETVEILM+AA+F++ D L GVT+NIMLGQ
Sbjct:   19 VAAGEMAGVVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINIAKDVKTPSIQIYLK-----PDCAHDAEKAKQIQSTLEYTTLMDVTASTAIYYDPDPTSTVVEEDADFVASYYDVI-----DEDTPLARSPWLLRIELNRIMMADKNLEMKEIALQIENEYGQDLSCIYTDDNADKLVLRIRIMSEEEDKVSQNGSA--SVGQEDDTFLKRVEHNMLTQMRLRGVPNVKKVFMRENPQNQWDEEKGFIMV-KEWVLDTDGTNLLDIICHESIDASRTISNDIVEIIEVLGIEAVRRALLNEIRNVISFDGAYVNYRHLACLADVMTFRGHLMAVTRHGINRVDSGPLVRCSFEETVEILMDAAMFSQGDELAGVTENIMLGQ 396          
BLAST of mRNA_Ecto-sp9_F_contig11085.940.1 vs.
Match: DNA-directed (RNA polymerase (Fragment) n=2 Tax=Gossypium trilobum TaxID=34281 RepID=A0A7J9EAE4_9ROSI)

HSP 1 Score: 402 bits (1034), Expect = 9.000e-131
Identity = 210/390 (53.85%), Postives = 284/390 (72.82%), Query Frame = 1
Query:   13 VGPGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLEERAAGADEAEGQEVAKRVVDILEYVTLGDITTSTQIYYDPDPRSTVVDEDVELLEGHFDIQEEEEDDKDTDRARPWLLRMELNREAVFDKRLDVVEIAKRVVAYFDGGLHVIRSDQNSEKLVLRIRVLDDVPDKIEAEPEAEDTAEADDVAMLKHLEKNLL-RLQLSGIAGISKVYMSEVSKPKFDEINGFAQRHKEWVLETDGTNLMAALCAEQIDPRRTVSNDVVECCTVLGIEGARGSLLKEFRAVVERDGSYVNYRHLSTLIDVMTFRGHLMAITRHGINRVDNGPMLRSSFEETVEILMEAAVFAEADNLKGVTDNIMLGQ 1179
            V PGEM G +AAQSIGEP TQMTLNTFH+AGVSAKNVTLGVPR++EIINVAK ++TPSL++YL   A+     + +E AK V   LEY TL  +T +T+++YDPDP ST+++ED++ ++ ++++ +EE      ++  PWLLR+ELNRE + DK+L + +IA+++   FD  L  I +D N+EKL+LRIR+++D   K E   E+     A+D   LK +E N+L  + L GI  I+KV++      KFDE +G+ +  +EWVL+T+G NL+A +C E +D RRT SN ++E   VLGIE  R SLL E R V+  DGSYVNYRHL+ L D MT+RGHLMAITRHGINR D GPM+R SFEETV+IL++AAV+AE+D L+GVT+NIMLGQ
Sbjct:  173 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLSPEAS-----KTKEKAKNVQCALEYTTLRSVTHATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEE---VAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDES-----AEDDVFLKKIESNMLTEMALRGIPDINKVFIKHSKASKFDEADGY-KTGEEWVLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESDYLRGVTENIMLGQ 548          
BLAST of mRNA_Ecto-sp9_F_contig11085.940.1 vs.
Match: DNA-directed (RNA polymerase (Fragment) n=1 Tax=Gossypium harknessii TaxID=34285 RepID=A0A7J9IBC4_9ROSI)

HSP 1 Score: 402 bits (1034), Expect = 1.730e-130
Identity = 210/390 (53.85%), Postives = 284/390 (72.82%), Query Frame = 1
Query:   13 VGPGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLEERAAGADEAEGQEVAKRVVDILEYVTLGDITTSTQIYYDPDPRSTVVDEDVELLEGHFDIQEEEEDDKDTDRARPWLLRMELNREAVFDKRLDVVEIAKRVVAYFDGGLHVIRSDQNSEKLVLRIRVLDDVPDKIEAEPEAEDTAEADDVAMLKHLEKNLL-RLQLSGIAGISKVYMSEVSKPKFDEINGFAQRHKEWVLETDGTNLMAALCAEQIDPRRTVSNDVVECCTVLGIEGARGSLLKEFRAVVERDGSYVNYRHLSTLIDVMTFRGHLMAITRHGINRVDNGPMLRSSFEETVEILMEAAVFAEADNLKGVTDNIMLGQ 1179
            V PGEM G +AAQSIGEP TQMTLNTFH+AGVSAKNVTLGVPR++EIINVAK ++TPSL++YL   A+     + +E AK V   LEY TL  +T +T+++YDPDP ST+++ED++ ++ ++++ +EE      ++  PWLLR+ELNRE + DK+L + +IA+++   FD  L  I +D N+EKL+LRIR+++D   K E   E+     A+D   LK +E N+L  + L GI  I+KV++      KFDE +G+ +  +EWVL+T+G NL+A +C E +D RRT SN ++E   VLGIE  R SLL E R V+  DGSYVNYRHL+ L D MT+RGHLMAITRHGINR D GPM+R SFEETV+IL++AAV+AE+D L+GVT+NIMLGQ
Sbjct:  397 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLSPEAS-----KTKEKAKNVQCALEYTTLRSVTHATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEE---VAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDES-----AEDDVFLKKIESNMLTEMALRGIPDINKVFIKHSKASKFDEADGY-KTGEEWVLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESDYLRGVTENIMLGQ 772          
BLAST of mRNA_Ecto-sp9_F_contig11085.940.1 vs.
Match: DNA-directed (RNA polymerase (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W9H4_9STRA)

HSP 1 Score: 396 bits (1018), Expect = 2.020e-130
Identity = 217/402 (53.98%), Postives = 288/402 (71.64%), Query Frame = 1
Query:   10 QVGPGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLEERAAGADEAEGQEVAKRVVDILEYVTLGDITTSTQIYYDPDPRSTVVDEDVELLEGHFDIQEEEEDDKDTDRARPWLLRMELNREAVFDKRLDVVEIAKRVVAYFDGGLHVIRSDQNSEKLVLRIRVLDDVPDKIEAEPEA--------EDTAEA--DDVAMLKHLEKNLL-RLQLSGIAGISKVYMSEVSKPK-FDEINGFAQRHKEWVLETDGTNLMAALCAEQIDPRRTVSNDVVECCTVLGIEGARGSLLKEFRAVVERDGSYVNYRHLSTLIDVMTFRGHLMAITRHGINRVDNGPMLRSSFEETVEILMEAAVFAEADNLKGVTDNIMLGQ 1179
            +V PGEM GVLAAQSIGEP TQMTLNTFH+AGVSAKNVTLGVPR+KEIINVAK V+TP LT+YL+E  +        +VA+ V  +LEY  LGDIT  T+IYYDPD  STV+ +D E ++ H++  +E +DD    R  PW+LR+ELN+    +K++ + EI +++   +   L VI++D N++ LV+RIR+++D+P  +  E +         ED  E   +D   LK LEKN+L +L+L GI  ++KV++   +K   ++E  GF  +  EWVLETDGTNLM+ L  + ID  RT+SND+VE   VLGIEG RG++L E R V+  DGSYVNYRHL+ L+DVMT  GHLMAI RHGINRVD+GP+LR SFEETV++LM+A+VFAE + LKGVT+NIM+GQ
Sbjct:  194 KVNPGEMAGVLAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVAKTVKTPGLTVYLDESVSS-----DADVARLVCSMLEYTVLGDITKLTEIYYDPDITSTVIAKDREFVKLHYEFSDETQDD--LRRLSPWVLRVELNQTVFLEKKMQMSEIVQQITNEYGEDLDVIKTDDNADDLVVRIRIVNDMPTHMGGEVDDDGNNIIHDEDDVECGQEDDVFLKRLEKNMLGQLKLRGIPDVNKVFLRAGAKRTIWNEETGFGIKD-EWVLETDGTNLMSVLGVDYIDATRTISNDIVEVFVVLGIEGVRGAILSELRNVISFDGSYVNYRHLACLVDVMTMHGHLMAIDRHGINRVDSGPLLRCSFEETVDMLMDASVFAEEEVLKGVTENIMMGQ 587          
BLAST of mRNA_Ecto-sp9_F_contig11085.940.1 vs.
Match: DNA-directed (RNA polymerase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UU09_9STRA)

HSP 1 Score: 408 bits (1049), Expect = 1.040e-129
Identity = 218/397 (54.91%), Postives = 292/397 (73.55%), Query Frame = 1
Query:   10 QVGPGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLEERAAGADEAEGQEVAKRVVDILEYVTLGDITTSTQIYYDPDPRSTVVDEDVELLEGHFDIQEEEEDDKDTDRARPWLLRMELNREAVFDKRLDVVEIAKRVVAYFDGGLHVIRSDQNSEKLVLRIRVLDDVPDKI-----EAEP-EAEDTAEADDVAMLKHLEKNLLR-LQLSGIAGISKVYMSEVSKPKFDEINGFAQRHKEWVLETDGTNLMAALCAEQIDPRRTVSNDVVECCTVLGIEGARGSLLKEFRAVVERDGSYVNYRHLSTLIDVMTFRGHLMAITRHGINRVDNGPMLRSSFEETVEILMEAAVFAEADNLKGVTDNIMLGQ 1179
            +V PGEM GVLAAQSIGEP TQMTLNTFH+AGVSAKNVTLGVPR+KEIINVAK+ +TP LTIYLEE  +G      Q++AK V  +LEY  LGD+   T+IYYDPD + T+V++D E ++ ++D+ +  E+D    R  PW LR+ELN    FDK++ + EI + V   + G L+VI +D N+++LV+R+R+++DVP  +     +  P ++ED  + DDV  LK LEK++L  L+L GI  + KV+M    +  +D+ +GF  +  EW+LETDGTNLM+ L  + +D  RTV ND+VE   VLGIEG RG++L+E R V+  DGSYVNYRHL+ L+DVMT +GHLMAI RHGINRV++GP+LRSSFEETV++LM+AA +AE + LKGVT+NIMLGQ
Sbjct:  455 KVNPGEMAGVLAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVAKHPKTPGLTIYLEEDVSG-----DQDIAKLVHSLLEYTVLGDVVKLTEIYYDPDIKETIVEKDREFVKDYYDLSDATEED--LRRLSPWCLRIELNPSVFFDKKMKMNEIVREVNNEYGGDLNVIVTDDNADELVVRVRIVNDVPQGMGQVDDDGNPIQSEDVGQEDDV-FLKRLEKSMLSSLKLRGIDHVKKVFMRNAKRTTWDDESGFGVKD-EWILETDGTNLMSVLGVDYVDATRTVCNDIVEVFQVLGIEGVRGAILRELRNVISFDGSYVNYRHLACLVDVMTMQGHLMAIDRHGINRVESGPLLRSSFEETVDMLMDAATYAEEEILKGVTENIMLGQ 842          
BLAST of mRNA_Ecto-sp9_F_contig11085.940.1 vs.
Match: DNA-directed (RNA polymerase (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8CQC3_9LAMI)

HSP 1 Score: 408 bits (1048), Expect = 5.270e-129
Identity = 212/390 (54.36%), Postives = 285/390 (73.08%), Query Frame = 1
Query:   13 VGPGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLEERAAGADEAEGQEVAKRVVDILEYVTLGDITTSTQIYYDPDPRSTVVDEDVELLEGHFDIQEEEEDDKDTDRARPWLLRMELNREAVFDKRLDVVEIAKRVVAYFDGGLHVIRSDQNSEKLVLRIRVLDDVPDKIEAEPEAEDTAEADDVAMLKHLEKNLL-RLQLSGIAGISKVYMSEVSKPKFDEINGFAQRHKEWVLETDGTNLMAALCAEQIDPRRTVSNDVVECCTVLGIEGARGSLLKEFRAVVERDGSYVNYRHLSTLIDVMTFRGHLMAITRHGINRVDNGPMLRSSFEETVEILMEAAVFAEADNLKGVTDNIMLGQ 1179
            V PGEM G +AAQSIGEP TQMTLNTFH+AGVSAKNVTLGVPR++EIINVAK ++TPSL++YL      A+ ++ +E AK V   LEY TL  +T +T+++YDPDP ST+++ED+E ++ ++++ +EE    D D+  PWLLR+ELNRE + DK+L + +IA+++   FD  L  I +D N+EKL+LRIR+++D   K E   E+     A+D   LK +E N+L  + L GI  I+KV++      +FDEI+GF +   EW+L+T+G NL+A LC   +D +RT SN ++E   VLGIE  R +LL E R V+  DGSYVNYRHL+ L D MT+RGHLMAITRHGINR D GPM+R SFEETV+IL++AAV+AE D+LKGVT+NIMLGQ
Sbjct:  430 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL-----NAEASKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIEFVKSYYEMPDEE---IDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDES-----AEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVNRFDEIDGF-KAENEWMLDTEGVNLLAVLCHPDVDSKRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDHLKGVTENIMLGQ 805          
BLAST of mRNA_Ecto-sp9_F_contig11085.940.1 vs.
Match: DNA-directed (RNA polymerase n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5B2K8_9ASTE)

HSP 1 Score: 395 bits (1015), Expect = 1.350e-127
Identity = 209/390 (53.59%), Postives = 281/390 (72.05%), Query Frame = 1
Query:   13 VGPGEMCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVRTPSLTIYLEERAAGADEAEGQEVAKRVVDILEYVTLGDITTSTQIYYDPDPRSTVVDEDVELLEGHFDIQEEEEDDKDTDRARPWLLRMELNREAVFDKRLDVVEIAKRVVAYFDGGLHVIRSDQNSEKLVLRIRVLDDVPDKIEAEPEAEDTAEADDVAMLKHLEKNLL-RLQLSGIAGISKVYMSEVSKPKFDEINGFAQRHKEWVLETDGTNLMAALCAEQIDPRRTVSNDVVECCTVLGIEGARGSLLKEFRAVVERDGSYVNYRHLSTLIDVMTFRGHLMAITRHGINRVDNGPMLRSSFEETVEILMEAAVFAEADNLKGVTDNIMLGQ 1179
            V PGEM G +AAQSIGEP TQMTLNTFH+AGVSAKNVTLGVPR++EIINVAK ++TPSL++YL+      +  + +E AK V   LEY TL  +T +T+++YDPDP ST+++EDV+ ++ ++++ +EE      ++  PWLLR+ELNRE + DK+L + +IA+++   FD  L  I +D N+EKL+LRIR+++D   K E   E+     A+D   LK +E N+L  + L GI  I+KV++      KF+E  GF +   EW+L+T+G NL+A +C E +D RRT SN ++E   VLGIE  R SLL E R V+  DGSYVNYRHL+ L D MT+RGHLMAITRHGINR D GPM+R SFEETV+IL++AAV+AE D L+GVT+NIMLGQ
Sbjct:   78 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK-----PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEE---IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDES-----AEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINKFEENEGF-RPEVEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDYLRGVTENIMLGQ 453          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11085.940.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
DNA-directed1.090e-25798.22RNA polymerase subunit n=1 Tax=Ectocarpus sp. CCAP... [more]
DNA-directed6.770e-25498.47RNA polymerase subunit n=2 Tax=Ectocarpus TaxID=28... [more]
DNA-directed1.030e-16369.04RNA polymerase subunit n=1 Tax=Tribonema minus Tax... [more]
DNA-directed1.570e-13356.01RNA polymerase n=2 Tax=Aphanomyces astaci TaxID=11... [more]
DNA-directed9.000e-13153.85RNA polymerase (Fragment) n=2 Tax=Gossypium trilob... [more]
DNA-directed1.730e-13053.85RNA polymerase (Fragment) n=1 Tax=Gossypium harkne... [more]
DNA-directed2.020e-13053.98RNA polymerase (Fragment) n=1 Tax=Eucampia antarct... [more]
DNA-directed1.040e-12954.91RNA polymerase n=1 Tax=Grammatophora oceanica TaxI... [more]
DNA-directed5.270e-12954.36RNA polymerase (Fragment) n=1 Tax=Genlisea aurea T... [more]
DNA-directed1.350e-12753.59RNA polymerase n=1 Tax=Nyssa sinensis TaxID=561372... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig11085contigEcto-sp9_F_contig11085:293..4176 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score745.0
Seed ortholog evalue1.8e-212
Seed eggNOG ortholog2880.D8LRY3
Preferred nameRPB1
KEGG rclassRC02795
KEGG koko:K03006
KEGG ReactionR00435,R00441,R00442,R00443
KEGG Pathwayko00230,ko00240,ko01100,ko03020,ko05016,ko05168,ko05169,map00230,map00240,map01100,map03020,map05016,map05168,map05169
KEGG ModuleM00180
GOsGO:0000428,GO:0000731,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005665,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006301,GO:0006351,GO:0006366,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0010494,GO:0016070,GO:0016591,GO:0018130,GO:0019438,GO:0019985,GO:0030880,GO:0031974,GO:0031981,GO:0032774,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0035770,GO:0036464,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0055029,GO:0061695,GO:0070013,GO:0071704,GO:0071897,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1990234,GO:1990904
EggNOG free text desc.DNA-directed 5'-3' RNA polymerase activity
EggNOG OGsCOG0086@1,KOG0260@2759
EC2.7.7.6
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400
Hectar predicted targeting categoryother localisation
Exons6
Model size1179
Cds size1152
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928348.3043606-CDS-Ecto-sp9_F_contig11085:292..5301622928348.3043606-CDS-Ecto-sp9_F_contig11085:292..530Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11085 293..530 -
1692277840.7770379-CDS-Ecto-sp9_F_contig11085:292..5301692277840.7770379-CDS-Ecto-sp9_F_contig11085:292..530Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11085 293..530 -
1622928348.3228695-CDS-Ecto-sp9_F_contig11085:1053..12711622928348.3228695-CDS-Ecto-sp9_F_contig11085:1053..1271Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11085 1054..1271 -
1692277840.793303-CDS-Ecto-sp9_F_contig11085:1053..12711692277840.793303-CDS-Ecto-sp9_F_contig11085:1053..1271Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11085 1054..1271 -
1622928348.3400366-CDS-Ecto-sp9_F_contig11085:2048..22041622928348.3400366-CDS-Ecto-sp9_F_contig11085:2048..2204Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11085 2049..2204 -
1692277840.8049405-CDS-Ecto-sp9_F_contig11085:2048..22041692277840.8049405-CDS-Ecto-sp9_F_contig11085:2048..2204Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11085 2049..2204 -
1622928348.3715253-CDS-Ecto-sp9_F_contig11085:2611..27591622928348.3715253-CDS-Ecto-sp9_F_contig11085:2611..2759Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11085 2612..2759 -
1692277840.8129218-CDS-Ecto-sp9_F_contig11085:2611..27591692277840.8129218-CDS-Ecto-sp9_F_contig11085:2611..2759Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11085 2612..2759 -
1622928348.386454-CDS-Ecto-sp9_F_contig11085:3429..35931622928348.386454-CDS-Ecto-sp9_F_contig11085:3429..3593Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11085 3430..3593 -
1692277840.8224015-CDS-Ecto-sp9_F_contig11085:3429..35931692277840.8224015-CDS-Ecto-sp9_F_contig11085:3429..3593Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11085 3430..3593 -
1622928348.3999665-CDS-Ecto-sp9_F_contig11085:3921..41491622928348.3999665-CDS-Ecto-sp9_F_contig11085:3921..4149Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11085 3922..4149 -
1692277840.8321984-CDS-Ecto-sp9_F_contig11085:3921..41491692277840.8321984-CDS-Ecto-sp9_F_contig11085:3921..4149Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11085 3922..4149 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928348.413013-UTR-Ecto-sp9_F_contig11085:4149..41761622928348.413013-UTR-Ecto-sp9_F_contig11085:4149..4176Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig11085 4150..4176 -
1692277840.8423145-UTR-Ecto-sp9_F_contig11085:4149..41761692277840.8423145-UTR-Ecto-sp9_F_contig11085:4149..4176Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig11085 4150..4176 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig11085.940.1prot_Ecto-sp9_F_contig11085.940.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig11085 293..4149 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig11085.940.1

>prot_Ecto-sp9_F_contig11085.940.1 ID=prot_Ecto-sp9_F_contig11085.940.1|Name=mRNA_Ecto-sp9_F_contig11085.940.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=384bp
MCGVLAAQSIGEPITQMTLNTFHFAGVSAKNVTLGVPRVKEIINVAKNVR
TPSLTIYLEERAAGADEAEGQEVAKRVVDILEYVTLGDITTSTQIYYDPD
PRSTVVDEDVELLEGHFDIQEEEEDDKDTDRARPWLLRMELNREAVFDKR
LDVVEIAKRVVAYFDGGLHVIRSDQNSEKLVLRIRVLDDVPDKIEAEPEA
EDTAEADDVAMLKHLEKNLLRLQLSGIAGISKVYMSEVSKPKFDEINGFA
QRHKEWVLETDGTNLMAALCAEQIDPRRTVSNDVVECCTVLGIEGARGSL
LKEFRAVVERDGSYVNYRHLSTLIDVMTFRGHLMAITRHGINRVDNGPML
RSSFEETVEILMEAAVFAEADNLKGVTDNIMLGQ
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mRNA from alignment at Ecto-sp9_F_contig11085:293..4176-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig11085.940.1 ID=mRNA_Ecto-sp9_F_contig11085.940.1|Name=mRNA_Ecto-sp9_F_contig11085.940.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3884bp|location=Sequence derived from alignment at Ecto-sp9_F_contig11085:293..4176- (Ectocarpus species9 EcSCA_722f female)
ATAAATCGTCAGGTTGGCCCCGGCGAGATGTGCGGCGTTTTGGCGGCCCA GTCGATCGGAGAGCCCATCACCCAGATGACCCTCAACACCTTCCACTTCG CCGGTGTCAGCGCGAAGAACGTTACCTTGGGAGTGCCTCGAGTGAAGGAG ATCATCAACGTGGCGAAGAACGTACGGACGCCGTCCTTGACGATCTACCT CGAGGAAAGGGCGGCGGGGGCGGACGAGGCGGAGGGGCAGGAGGTCGCCA AGCGGGTGCGTTTGTTGTGGCGTTGTGGTGAAGATAGGTGGATGCGTGTT CGCTTTGGGCATTGTGCGGTGGTCTTGGTACGTGGGACAAAAGAGCACAA AGAGGGCGATATATATATATATGTAGAGAGAATATAGAGAGACAGACTAG GTCATCTTTTTGGTGTGGCGAAGCGGTAACAGAGACTGTTGGCCTTGTTT GCCCGCAATAGGTAGACACGAAGGAGGGGCGTGGGGGTCGTCTTACCTTA GCCTTAGCCTCGCACTAGACCTCCCTATTATAGCAACCAACGGGCCTCCC CGCAATCAAACCGGCCCAACTCGTTGCAACAAGGTGGTGGACATCCTGGA GTACGTGACGCTGGGGGACATCACCACGTCGACCCAGATCTACTACGACC CGGACCCTCGATCTACGGTGGTAGACGAGGACGTGGAGCTGCTGGAGGGG CACTTCGACATCCAGGAGGAGGAAGAAGACGACAAGGATACCGACAGGTA CTGCTGCAAGGCGTTACTCCTGTAGTAGCTATTTTAGCGCCTTATGTTGT ACACGTGTACGTATTCGTTCGTGCGTGTAGCTAACTTAGCGCGCCTAGGT GCTGCTGTCTGTTGCGTTGCACATACCGTCGTTTGTGTGGGGTTCGATGT GTGGCTTGTGGAGATTCTGCTCCGTTGCGTGCGAGTTGCCTTTGGTTTCT ATGATGGTGCGTGTTTCGCTTGGAGGCGGGGCGATCAGACCGGAACACAA CGCACATGGCTATTTTGGCCCCCTTGTGTGAGTAAGAGCGGCGATGGGTA CATACATGCCATTTTTGTGGCATCCCTTGTTCCGTGGAACTTCGGTACAG GAGTCGCGTGACAATACGCACCAGCAAACCAAGCCGTAGGTGGTATCGAA GGTTTCACAACGCAACTCCACGTGTCCTCAGCAAACGTGCCTCGTGCTAC TTATTTCATTTTTATCTCTATACCACGATGCATCTGTATCCGCAGATAAG AGTCCAGGATAAATGACCAATGAAGCCATGGTGTTGGCAGTAGCACTACA TGTGTTTCCCCCGGGCAGCACACGGCAATATTTATTGTAATCGTAGGACC AATATCTGTTCTTTCTTGTTTTTTCCCTTGTGTTTCGTCGTGTGCTGGGT CTCGCGCCCGCCATCAGAGCAAGGCCGTGGCTGCTCCGCATGGAGCTCAA CCGCGAGGCTGTGTTCGACAAGCGTCTGGACGTTGTGGAGATCGCCAAGA GGGTTGTCGCTTACTTTGACGGGGGGCTGCACGTCATCCGAAGCGACCAG AACTCGGAGAAGTTGGTGAGAAGACCGTGCCCTGTTCTTTTTTGTTGGTT ACAAACGTAGACCGTGTTGTTGCTGTTGTTGTGTCGACATTAGAAACCGT TTCCGATCTCTCTGCCCGGTACCTTCATCTGTCCGTACTGGTCTAGCACT TGACGTAGTCGATTGCCGTGGTCACAGACCACATGTACTTACAGAGCAGT TTCTTGTTGTGCAAGCCCCTCCCGCAGTCACGTCTATCCGTCTTTTGGGT GTTTTGTCGTGTCTCAGGCGTTACGGATGATGACTGCTAGAATTAATCGA TCGCCCAATATCGGTTATTAAAGCTGTGTGTGCTTTGTTGTGCTGCGGAT GATCGAGTACATAAATTAATCGATTGCCAATTGTCAGTTATTAACGCCGT GTGTGTTTATGTCGTGTCTCAGGTGTTGCGGATACGCGTCCTGGATGATG TGCCCGACAAGATTGAGGCGGAGCCGGAAGCGGAGGACACGGCGGAGGCG GACGATGTTGCGATGCTCAAGCACCTCGAGAAGAACCTCCTCCGACTACA GCTGTCCGGTATCGCTGGTATCTCGAAGGTGGGCCGATGCTGTCGCTGCT GCTATTGTCGTTGCCGTTGTTGCCGTTGGCGGTGCTGGTGCTGGTGCTGA TGCTGTTGCTGCTGCTGTTGTTGGTAGTGCTGGTGCTGGTGCTGGTGCTG GTGCTGTTGCTGCTGATGTTGTTGTTAGGTTGGATGCTGGTGGTGGGATA TCTACCAAAAACTTGAAATTCAGCGCGGAAGCCCCCCGGGAGGTTGCAGA GACGACTCCCTTGGCGTTGCCTAGGCTCACCCAGGCTCGCTTGGATTGTG TCGTGGTGTGCAGAGATGTGTTGCGCGACGATTGACTCTGTCAGATGAGT GTGCACATCTGAGGTCGCCAAGCTGCTGTGACGTGCTAAATAGGGCGACC CTGTTGCCTTTGACACGCGGTCGACGTGGTTACCTTCACACATACTCCGA AGTACCGGTGCCCCCGCCCTCCTTCCTTGCTATTGGAGAAGAGTCGTCAT GCGATGGCGGATTGCCCAAGGCTGGTAGCATGTGACTATAATAGCTCCTT CCCCTCTTATGTAGCCTATAATCGACGTGTTCATAGCGCAACCCCTTATC TTCTTAAAGGTGAAAGTATTGCCCGAGGCACTAAAGCCCAGATGATCATC AAGGACGCCCTCAACCCACGCAACCAAAATATTGGTGACCCCATATATTT TTCGCTGTCTTTCCTTTCAGGTGCGCAACCACTTCATTCATGACCTCCCC AATGCAAAACACTGTGTTTTGTTCTCGCTGTTACACTCTCTGTGTTTCCC GTCAGGTGTACATGTCCGAGGTTTCCAAGCCGAAGTTCGACGAGATCAAC GGGTTCGCGCAGCGGCACAAGGAGTGGGTGCTGGAGACCGACGGCACGAA CCTCATGGCGGCGCTGTGCGCGGAGCAGATCGACCCCAGGCGCACCGTGT CGAACGACGTCGTGGAGTGCTGCACGGTGCTGGGGATCGAGGGCGCCAGA GGCTCGCTTCTCAAGGAGTTCCGGTGAGAGGAGGAGGAGGCGGGAGGAGT GCGTGACCTTTGGGTGTTGTTTGTCGCATCGACGTTTTTTTTGCTGTCTC AATGTCGGGGGTTTGTCAATGCACACCGGCATCGAGCGGCTGATGGCAAG CCGTCGGTGTGTCCATCCCCCGGGGGTTGATTGGGGCGGGAGAAGGCGCG CGTGGCCTTTGGTGGTGGGCGTTGTTTGTCGCAACGACGTTTGTGCTGTC TCAATGGTGGGGTTGTCAGCTCACACGAACGGGCTGCTCCGTCCTTGCCT TTCTTGGCCACTCGCGAATCGGAATCGAGTCTTGGGGAAGCCGGCTTTGT CTCATTGTATCTCTGTCAGGATTCAGTGCTGATGCACGCAAATCACAGTT CATGGTGAGCGAAACTTGTGTTCGTGGGTCATTTCTGTCTCTGTGTGTCT CTCTCTCTGCTGCTGCTGCTGCTGCTGCTGCTCGCCGATTCCTGCCTTCT GTTCTGTCGCCGCTTTTCTCTCCCACACACACCAACGATATCGCAGAGCC GTGGTGGAGAGAGACGGTTCGTACGTCAACTACCGGCACCTGAGTACCCT GATCGACGTCATGACGTTCCGGGGGCACCTAATGGCCATCACGCGACACG GCATCAACCGGGTGGACAACGGCCCGATGCTTCGGTCGTCGTTCGAGGAG ACGGTGGAGATCTTGATGGAGGCGGCGGTGTTTGCAGAGGCCGACAACCT CAAGGGGGTGACGGACAACATTATGCTCGGGCAG
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig11085:293..4176-

>mRNA_Ecto-sp9_F_contig11085.940.1 ID=mRNA_Ecto-sp9_F_contig11085.940.1|Name=mRNA_Ecto-sp9_F_contig11085.940.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2304bp|location=Sequence derived from alignment at Ecto-sp9_F_contig11085:293..4176- (Ectocarpus species9 EcSCA_722f female)
ATGTGCGGCGTTTTGGCGGCCCAGTCGATCGGAGAGCCCATCACCCAGAT
GACCCTCAACACCTTCCACTTCGCCGGTGTCAGCGCGAAGAACGTTACCT
TGGGAGTGCCTCGAGTGAAGGAGATCATCAACGTGGCGAAGAACGTACGG
ACGCCGTCCTTGACGATCTACCTCGAGGAAAGGGCGGCGGGGGCGGACGA
GGCGGAGGGGCAGGAGGTCGCCAAGCGGATGTGCGGCGTTTTGGCGGCCC
AGTCGATCGGAGAGCCCATCACCCAGATGACCCTCAACACCTTCCACTTC
GCCGGTGTCAGCGCGAAGAACGTTACCTTGGGAGTGCCTCGAGTGAAGGA
GATCATCAACGTGGCGAAGAACGTACGGACGCCGTCCTTGACGATCTACC
TCGAGGAAAGGGCGGCGGGGGCGGACGAGGCGGAGGGGCAGGAGGTCGCC
AAGCGGGTGGTGGACATCCTGGAGTACGTGACGCTGGGGGACATCACCAC
GTCGACCCAGATCTACTACGACCCGGACCCTCGATCTACGGTGGTAGACG
AGGACGTGGAGCTGCTGGAGGGGCACTTCGACATCCAGGAGGAGGAAGAA
GACGACAAGGATACCGACAGGTGGTGGACATCCTGGAGTACGTGACGCTG
GGGGACATCACCACGTCGACCCAGATCTACTACGACCCGGACCCTCGATC
TACGGTGGTAGACGAGGACGTGGAGCTGCTGGAGGGGCACTTCGACATCC
AGGAGGAGGAAGAAGACGACAAGGATACCGACAGAGCAAGGCCGTGGCTG
CTCCGCATGGAGCTCAACCGCGAGGCTGTGTTCGACAAGCGTCTGGACGT
TGTGGAGATCGCCAAGAGGGTTGTCGCTTACTTTGACGGGGGGCTGCACG
TCATCCGAAGCGACCAGAACTCGGAGAAGTTGAGCAAGGCCGTGGCTGCT
CCGCATGGAGCTCAACCGCGAGGCTGTGTTCGACAAGCGTCTGGACGTTG
TGGAGATCGCCAAGAGGGTTGTCGCTTACTTTGACGGGGGGCTGCACGTC
ATCCGAAGCGACCAGAACTCGGAGAAGTTGGTGTTGCGGATACGCGTCCT
GGATGATGTGCCCGACAAGATTGAGGCGGAGCCGGAAGCGGAGGACACGG
CGGAGGCGGACGATGTTGCGATGCTCAAGCACCTCGAGAAGAACCTCCTC
CGACTACAGCTGTCCGGTATCGCTGGTATCTCGAAGGTGTTGCGGATACG
CGTCCTGGATGATGTGCCCGACAAGATTGAGGCGGAGCCGGAAGCGGAGG
ACACGGCGGAGGCGGACGATGTTGCGATGCTCAAGCACCTCGAGAAGAAC
CTCCTCCGACTACAGCTGTCCGGTATCGCTGGTATCTCGAAGGTGTACAT
GTCCGAGGTTTCCAAGCCGAAGTTCGACGAGATCAACGGGTTCGCGCAGC
GGCACAAGGAGTGGGTGCTGGAGACCGACGGCACGAACCTCATGGCGGCG
CTGTGCGCGGAGCAGATCGACCCCAGGCGCACCGTGTCGAACGACGTCGT
GGAGTGCTGCACGGTGCTGGGGATCGAGGGCGCCAGAGGCTCGCTTCTCA
AGGAGTTCCGGTGTACATGTCCGAGGTTTCCAAGCCGAAGTTCGACGAGA
TCAACGGGTTCGCGCAGCGGCACAAGGAGTGGGTGCTGGAGACCGACGGC
ACGAACCTCATGGCGGCGCTGTGCGCGGAGCAGATCGACCCCAGGCGCAC
CGTGTCGAACGACGTCGTGGAGTGCTGCACGGTGCTGGGGATCGAGGGCG
CCAGAGGCTCGCTTCTCAAGGAGTTCCGAGCCGTGGTGGAGAGAGACGGT
TCGTACGTCAACTACCGGCACCTGAGTACCCTGATCGACGTCATGACGTT
CCGGGGGCACCTAATGGCCATCACGCGACACGGCATCAACCGGGTGGACA
ACGGCCCGATGCTTCGGTCGTCGTTCGAGGAGACGGTGGAGATCTTGATG
GAGGCGGCGGTGTTTGCAGAGGCCGACAACCTCAAGGGGGTGACGGACAA
CATTATGCTCGGGCAGAGCCGTGGTGGAGAGAGACGGTTCGTACGTCAAC
TACCGGCACCTGAGTACCCTGATCGACGTCATGACGTTCCGGGGGCACCT
AATGGCCATCACGCGACACGGCATCAACCGGGTGGACAACGGCCCGATGC
TTCGGTCGTCGTTCGAGGAGACGGTGGAGATCTTGATGGAGGCGGCGGTG
TTTGCAGAGGCCGACAACCTCAAGGGGGTGACGGACAACATTATGCTCGG
GCAG
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