mRNA_Ecto-sp9_F_contig110.880.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig110.880.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVA6_ECTSI) HSP 1 Score: 371 bits (952), Expect = 2.360e-129 Identity = 186/193 (96.37%), Postives = 190/193 (98.45%), Query Frame = 1
Query: 64 MLSTRGQGFTASSVVRSGHKAGPRSMTRPVMAQQQQQSSALELIDDAAILPGIAAGVFEKDARPVLLYDGVCNMCNGFVNLFLDIDTDEKFRFSALQSQTGRALLALSGRSPDDISSIVLVEQSGAAHIQSDALLRMGRVLGGPVGLVLLPGVLVPKFVRNKMYDTVADNRYSVMGKRDVCRCSDERYADRFI 642
MLSTRGQGFTAS VVRSGHKA PRS+TRPVMAQQQQQSSALEL+DDAAILPGIAA VFEKDARPVLLYDGVCNMCNGFVNLFLD+DTDEKFRFSALQSQTGRALLALSGRSPDDISSIVLVEQSGAAHIQSDALLRMGR+LGGPVGLVLLPGVLVPKFVRNKMYDTVADNRYSVMGKRDVCRCSDERYADRFI
Sbjct: 1 MLSTRGQGFTASHVVRSGHKATPRSVTRPVMAQQQQQSSALELVDDAAILPGIAASVFEKDARPVLLYDGVCNMCNGFVNLFLDVDTDEKFRFSALQSQTGRALLALSGRSPDDISSIVLVEQSGAAHIQSDALLRMGRLLGGPVGLVLLPGVLVPKFVRNKMYDTVADNRYSVMGKRDVCRCSDERYADRFI 193
BLAST of mRNA_Ecto-sp9_F_contig110.880.1 vs.
Match: Uncharacterized (protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X8I3_9CHLO) HSP 1 Score: 172 bits (436), Expect = 1.620e-50 Identity = 82/136 (60.29%), Postives = 102/136 (75.00%), Query Frame = 1
Query: 235 FEKDARPVLLYDGVCNMCNGFVNLFLDIDTDEKFRFSALQSQTGRALLALSGRSPDDISSIVLVEQSGAAHIQSDALLRMGRVLGGPVGLVLLPGVLVPKFVRNKMYDTVADNRYSVMGKRDVCRCSDERYADRFI 642
F D RPV+LYDGVCN+CNG VNL LD+D +FR +ALQS GR LL GR PDDISSIV+VE+ G HI+SDA+LR+ + L P L L GV VP F+R+ +YD VADNRYS++GKRDVCR D+R+++RFI
Sbjct: 85 FANDRRPVILYDGVCNLCNGAVNLMLDLDPRGEFRMAALQSPAGRRLLQTCGRQPDDISSIVVVERGGKHHIKSDAILRIAQGLSNPFPLFALFGVPVPPFLRDSLYDLVADNRYSILGKRDVCRLKDDRFSERFI 220
BLAST of mRNA_Ecto-sp9_F_contig110.880.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH16_9STRA) HSP 1 Score: 166 bits (419), Expect = 5.790e-49 Identity = 79/138 (57.25%), Postives = 105/138 (76.09%), Query Frame = 1
Query: 232 VFEKDARPVLLYDGVCNMCNGFVNLFLDIDTDEK-FRFSALQSQTGRALLALSGRSPDDISSIVLVEQSGAAHIQSDALLRMGRVLGGPVGLVLLPGVLVPKFVRNKMYDTVADNRYSVMGKRDVCRCSDERYADRFI 642
VF D RPV+L+DGVCN CN +VN L +D D K RF+ LQ G+ALL +GR+ DDISSIVLV++ G+ +I+SDA+LR+ + LGGP ++ PG L+P+F R+ +YD VA+NRYS+MGKR+ CRCSD +YADRFI
Sbjct: 10 VFSSDKRPVVLFDGVCNFCNTWVNAALQLDPDGKALRFTPLQGDVGKALLQQAGRAADDISSIVLVDEQGS-YIKSDAILRISKALGGPAPVLAAPGFLMPQFARDTLYDLVANNRYSLMGKRETCRCSDPKYADRFI 146
BLAST of mRNA_Ecto-sp9_F_contig110.880.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B0P4_9STRA) HSP 1 Score: 154 bits (390), Expect = 1.240e-43 Identity = 79/135 (58.52%), Postives = 96/135 (71.11%), Query Frame = 1
Query: 238 EKDARPVLLYDGVCNMCNGFVNLFLDIDTDEKFRFSALQSQTGRALLALSGRSPDDISSIVLVEQSGAAHIQSDALLRMGRVLGGPVGLVLLPGVLVPKFVRNKMYDTVADNRYSVMGKRDVCRCSDERYADRFI 642
EKD+RPV+L+DGVCNMCNG VN LD D D FRF+ALQS TGRALL +GR PDDISSIVLV+ S AA+I+SDA+LR+ R L P + G+ PK R+ YD +A NRY V G+ CR SD+R+ RFI
Sbjct: 80 EKDSRPVILFDGVCNMCNGGVNFALDWDPDGNFRFAALQSPTGRALLRRAGREPDDISSIVLVDDS-AAYIKSDAILRIARKLNLPFPFLGSAGLFFPKLPRDVFYDVIAQNRYRVFGRSQSCRLSDDRFEARFI 213
BLAST of mRNA_Ecto-sp9_F_contig110.880.1 vs.
Match: Uncharacterized (protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VXX5_MARPO) HSP 1 Score: 155 bits (392), Expect = 2.130e-43 Identity = 78/136 (57.35%), Postives = 98/136 (72.06%), Query Frame = 1
Query: 235 FEKDARPVLLYDGVCNMCNGFVNLFLDIDTDEKFRFSALQSQTGRALLALSGRSPDDISSIVLVEQSGAAHIQSDALLRMGRVLGGPVGLVLLPGVLVPKFVRNKMYDTVADNRYSVMGKRDVCRCSDERYADRFI 642
F D RP++L+DGVCNMCNG VN LD D + K RF+ALQS+ GRALLA SGRSPDDISS+VLV+Q A+I+SDA+L R L P V + +VP F+R+ +YD VADNRYSV G+ CR SD R+ +RF+
Sbjct: 126 FATDTRPIILFDGVCNMCNGAVNFMLDNDAEGKVRFAALQSEAGRALLARSGRSPDDISSVVLVDQE-RAYIKSDAILNTLRYLQFPFPPVAMAASIVPLFLRDVVYDQVADNRYSVFGRTIACRLSDSRFEERFL 260
BLAST of mRNA_Ecto-sp9_F_contig110.880.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WGK0_TETOB) HSP 1 Score: 152 bits (383), Expect = 1.760e-42 Identity = 81/157 (51.59%), Postives = 105/157 (66.88%), Query Frame = 1
Query: 172 QSSALELIDDAAILPGIAAGVFEKDARPVLLYDGVCNMCNGFVNLFLDIDTDEKFRFSALQSQTGRALLALSGRSPDDISSIVLVEQSGAAHIQSDALLRMGRVLGGPVGLVLLPGVLVPKFVRNKMYDTVADNRYSVMGKRDVCRCSDERYADRFI 642
+ +A + A A F D RPV+L+DGVCNMCNG VN LD D + +RF+ALQS GR LL GR+PDDISSIVLVE+S +I+S+A+LR+ LG P+ L+ +LVPKFV + +YD VA+NRYS GK D CR SD+ +ADRF+
Sbjct: 69 EQAAAPAVSQPAAAAVQAVDYFAIDKRPVVLFDGVCNMCNGGVNFMLDWDKEGVYRFAALQSTPGRQLLTRCGRAPDDISSIVLVEES-RCYIKSEAVLRIALRLGMPLPLLAGLALLVPKFVGDPVYDQVANNRYSFFGKSDSCRVSDDGFADRFL 224
BLAST of mRNA_Ecto-sp9_F_contig110.880.1 vs.
Match: Uncharacterized (protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QEF6_9CHLO) HSP 1 Score: 149 bits (377), Expect = 1.220e-41 Identity = 84/176 (47.73%), Postives = 110/176 (62.50%), Query Frame = 1
Query: 115 GHKAGPRSMTRPVMAQQQQQSSALELIDDAAILPGIAAGVFEKDARPVLLYDGVCNMCNGFVNLFLDIDTDEKFRFSALQSQTGRALLALSGRSPDDISSIVLVEQSGAAHIQSDALLRMGRVLGGPVGLVLLPGVLVPKFVRNKMYDTVADNRYSVMGKRDVCRCSDERYADRFI 642
G G ++ + + SSA + AA A F D RPV+L+DGVCNMCNG VN LD D + +RF+ALQS G+ LL GR+PDDISSIVLVEQ I+S+A+LR+ LG P+ L+ +LVPKF+ + +YD VA+NRYSV GK + CR SD +ADRF+
Sbjct: 45 GGSTGQQAPAQARAVMRCNASSAPQAAAAAAPAAMQAVDYFATDTRPVVLFDGVCNMCNGGVNFMLDWDKEGVYRFAALQSTPGQQLLTRCGRAPDDISSIVLVEQDRCC-IKSEAVLRIATRLGMPLPLLAGLALLVPKFISDPVYDQVANNRYSVFGKSNSCRVSDAGFADRFL 219
BLAST of mRNA_Ecto-sp9_F_contig110.880.1 vs.
Match: Uncharacterized (protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1K1V9_GUITC) HSP 1 Score: 147 bits (371), Expect = 1.480e-41 Identity = 79/147 (53.74%), Postives = 99/147 (67.35%), Query Frame = 1
Query: 220 IAAGVFEKDARPVLLYDGVCNMCNGFVNLFLDIDTDEK----FRFSALQSQTGRALLALSGRSPDDISSIVLVEQSGAAHIQSDALLRMGRVLGGPVGLVL--LPGVLVPKFVRNKMYDTVADNRYSVMGKRDVCRCSDERYADRFI 642
I VFEKD+RPV+LYDGVCN+CNG VN LD D + FRF+ALQS+ GRALL GR PDDISSIVL + G +++S+A+LR+G+V PV PG P+ VR+ YD VADNRY+ G D CR SDER+ +RF+
Sbjct: 9 IVRKVFEKDSRPVILYDGVCNLCNGGVNFMLDWDNPTQLRGNFRFAALQSEVGRALLQRGGRRPDDISSIVLACEDGKTYVKSEAILRIGKVCNQPVRFPSDSFPGPW-PRNVRDVFYDFVADNRYNFFGISDECRLSDERFDNRFV 154
BLAST of mRNA_Ecto-sp9_F_contig110.880.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ94_9STRA) HSP 1 Score: 148 bits (374), Expect = 4.070e-41 Identity = 77/146 (52.74%), Postives = 105/146 (71.92%), Query Frame = 1
Query: 223 AAGVFEKDARPVLLYDGVCNMCNGFVNLFLDIDTDEKFRFSALQSQTGRALLALSGRSPDDISSIVLVE-----QSG-AAHIQSDALLRMGRVLGGPVGLVLLPGVLVPKFVRNKMYDTVADNRYSVMGKRDVCRCSDERYADRFI 642
A VFE D+RPV+L+DGVCNMCNG VNL LD D KFR++ALQS+TG+ALL +GR+PDDIS+IVLVE Q G A+I+++A+ R+ L P+ L+ VP+ V + YD +A NRY ++G++DVCR SD+R+ DRF+
Sbjct: 81 AEAVFETDSRPVILFDGVCNMCNGGVNLALDWDKVGKFRYAALQSETGKALLVKAGRAPDDISTIVLVEGPAGKQEGWRAYIKAEAVRRISAGLRAPLPLIAFAVRPVPRPVLDVAYDFIAANRYRILGRKDVCRLSDDRFEDRFL 226
BLAST of mRNA_Ecto-sp9_F_contig110.880.1 vs.
Match: Hypothetical (protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HUG9_9CRYP) HSP 1 Score: 148 bits (373), Expect = 6.250e-41 Identity = 79/152 (51.97%), Postives = 103/152 (67.76%), Query Frame = 1
Query: 220 IAAGVFEKDARPVLLYDGVCNMCNGFVNLFLDIDTDEK----FRFSALQSQTGRALLALSGRSPDDISSIVLVEQSGAAHIQSDALLRMGRVLG-GPVGLVLLPGV------LVPKFVRNKMYDTVADNRYSVMGKRDVCRCSDERYADRFI 642
+A VF+KD+RPV+LYDGVCN+CNG VN LD D + FRF+ALQS+ GRALL GRSPDDISSIVL + G +++S+A+LR+G+ LG G + L P +VP VR+ YD +ADNRY+ G D CR SDER+ +RF+
Sbjct: 76 VARKVFDKDSRPVILYDGVCNLCNGGVNFMLDWDKPSEPRGNFRFAALQSEVGRALLRRGGRSPDDISSIVLACEDGNTYVKSEAILRIGKGLGQGTILWPLAPVASTTALKIVPSPVRDIFYDFIADNRYNFFGMSDECRLSDERFNNRFV 227 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig110.880.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig110.880.1 >prot_Ecto-sp9_F_contig110.880.1 ID=prot_Ecto-sp9_F_contig110.880.1|Name=mRNA_Ecto-sp9_F_contig110.880.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=215bp GVIRHAFYGTAVVALWLVAIAMLSTRGQGFTASSVVRSGHKAGPRSMTRPback to top mRNA from alignment at Ecto-sp9_F_contig110:35350..36696- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig110.880.1 ID=mRNA_Ecto-sp9_F_contig110.880.1|Name=mRNA_Ecto-sp9_F_contig110.880.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=1347bp|location=Sequence derived from alignment at Ecto-sp9_F_contig110:35350..36696- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig110:35350..36696- >mRNA_Ecto-sp9_F_contig110.880.1 ID=mRNA_Ecto-sp9_F_contig110.880.1|Name=mRNA_Ecto-sp9_F_contig110.880.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1290bp|location=Sequence derived from alignment at Ecto-sp9_F_contig110:35350..36696- (Ectocarpus species9 EcSCA_722f female)back to top |