mRNA_Ecto-sp9_F_contig1099.858.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig1099.858.1 vs.
Match: 60S (ribosomal export protein NMD3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNZ8_ECTSI) HSP 1 Score: 1075 bits (2781), Expect = 0.000e+0 Identity = 559/575 (97.22%), Postives = 561/575 (97.57%), Query Frame = 2
Query: 146 MEVVAPPTDGLAAPPPPEPEKQMPTILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDTCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTKASRSRGKFCFVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFVDPLTAQTADVTEEKYWRYEFPALLSSTRLVPYVVLGTEPLPEKARPSAPRRGHRIRKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLGYDVSSANLPEGEATGDLKGRLPDVVLVRKVYPRHDREGGGKADRHWKLGELEKDGGDXXXXXXVSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQGLAAKPPPADEDGAMEDVEEMDEEEVRLDELLDAMTLDNANAGPDGEEDLGAASASIFEAGAAPAPNAELLLDDDPEL 1870
MEVVAPPTDGLAAPPPPEPEKQMPTILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDTCAAAFT+NTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTK VKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFVDPLTAQTADVTEEKYWRYEFP+LLSSTRLVPYVVLGTEPLPEKARPSAPRRGHRIRKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVL YDVSSANLPEGEATGDLKGRLPDVVLVRKVYPRHDREGGGKADRHWKLGELEKDGGDXXXXXXVSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQGLAAKP AD DGAMEDVEEMDEEEVRLDELLDAMTLDNANAGPDGEEDLGAASASIFEAGAAPAPNAELLLDDDPEL
Sbjct: 1 MEVVAPPTDGLAAPPPPEPEKQMPTILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDTCAAAFTDNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTK----------VKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFVDPLTAQTADVTEEKYWRYEFPSLLSSTRLVPYVVLGTEPLPEKARPSAPRRGHRIRKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLAYDVSSANLPEGEATGDLKGRLPDVVLVRKVYPRHDREGGGKADRHWKLGELEKDGGDXXXXXXVSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQGLAAKPAAADGDGAMEDVEEMDEEEVRLDELLDAMTLDNANAGPDGEEDLGAASASIFEAGAAPAPNAELLLDDDPEL 565
BLAST of mRNA_Ecto-sp9_F_contig1099.858.1 vs.
Match: 60S (ribosomal export protein NMD3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB23_9STRA) HSP 1 Score: 646 bits (1666), Expect = 8.900e-221 Identity = 351/566 (62.01%), Postives = 419/566 (74.03%), Query Frame = 2
Query: 188 PPPEPEKQMPTILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDTCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTKASRSRGKFCFVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFVDPLTAQTADVTEEKYWRYEFPALLSSTRLVPYVVLGTEPLPEKARPSAPR--RGHRIRKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLGYDVSSANLPEGEATGDLKGRLPDVVLVRKVYPRHDREGGGKADRHWKLGELEKDGGDXXXXXXVSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQ---GLAAKPPPADEDGAMEDVEEMDEEEVRLDELLDAMTLDNANAGPDGEEDLGAASASIFEAGAAPAPN-AELLLDDDPE 1867
PPP ++ T+ CC+CS PI PNPT MCV CIRTQVDITEGIA T+ QCRGC R+L+P WVE LESRELMA+CLRK+SGL +VKLVDASW+WTE HSRRLK+KLTVQKEV NGA+LQQA++V F VRNQQC C A++TNNTW AVVQ+RQRVDHKRTFFYLEQLILKHNAH N+QT KDGMDF++ E++ +AR + FLE V+P C +K+SKKL+SADNHSN +NFHYTYLVT+ PVCKDDLVLLP RLAE+LG +RLAV QRI++ + VDP+TAQTADV + Y R+EF ALLSSTRLVP+VVLG EPLP PSAP +G R+R+AR+AEV +ARECDLG ND + TA+SHLGH+L+AGDTVLGYDV+SANLPE G LK LPDVVLVRKVY G GK R W+L LEKD KRD A + DYERF+QQLE+DK+MRRQVNL+K G AAK G +D E+DEE++R++ELLD M LD+ +A PD + A +F AG AP N A L LDD+ +
Sbjct: 8 PPPSALPELATVACCICSAPIKPNPTHMCVQCIRTQVDITEGIALKPTIFQCRGCMRWLKPNWVEATLESRELMAICLRKVSGLNRVKLVDASWVWTEAHSRRLKLKLTVQKEVQNGAILQQALIVEFTVRNQQCTECQASYTNNTWKAVVQIRQRVDHKRTFFYLEQLILKHNAHVNAINVQTHKDGMDFFYAERNQAARMLSFLESVIP----------CRIKNSKKLISADNHSNTYNFHYTYLVTVAPVCKDDLVLLPARLAETLGQFARLAVVQRISNGIALVDPVTAQTADVNVDHYARHEFVALLSSTRLVPFVVLGLEPLPL---PSAPTMAQGRRMRRARLAEVTVARECDLGANDTQFTAISHLGHLLKAGDTVLGYDVASANLPEDHLRG-LKTALPDVVLVRKVYT----SGAGK--RAWRLEALEKD------REAELSKRDADAHDADYERFMQQLEADKEMRRQVNLFKDLAIGAAAKT------GGSDDDNEVDEEQIRVEELLDDMRLDDPDAAPDDGD------AQVFSAGEAPGVNFAALALDDEDD 535
BLAST of mRNA_Ecto-sp9_F_contig1099.858.1 vs.
Match: 60S (ribosomal export protein NMD3 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJE1_9STRA) HSP 1 Score: 514 bits (1323), Expect = 7.560e-169 Identity = 273/523 (52.20%), Postives = 355/523 (67.88%), Query Frame = 2
Query: 218 TILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDTCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTKASRSRGKFCFVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFVDPLTAQTADVTEEKYWRY------EFPALLSSTRLVPYVVLGTEPLPEKARPSAPRRGHRIRKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLGYDVSSANLPEGEATGDLKGR-LPDVVLVRKVYPRHDREGGGKADRHWKLGELEKDGGDXXXXXXVSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQ------GLAAKPPPADEDGAMEDVEEMDEEEVRLDELLDAMTL 1747
T+LCC C PI NP+ MC C+ + DITEGIAT L++H+CRGC+R+LRP WV +LES+ELMA+CLRKI GL KV LVDA WIWTEPHS RLK+K+T+QKEV GA+LQQ+ VV FV+RNQQC+ C +T+ TW AVVQVRQRVDHKRTF+YLEQL+LKHN HS+C +IQ+F+DGMDFYF EK+ + RF DFL+G +P + +K++KKL+S+DNHSNIFNF +T+L ++P+CKDDL +LP RLA++L +IS L + +R+T V VDPLT A + Y + F ++S+ RL+ Y+VLG EP+ R A + + K R+A VE+AR DLG ND + VSHLGHILR GDTVLGYDVS+ANL + + K R LP+VVLVRK+Y + R W L +LE D +K D + DYERF+QQLE DK+MR+ VNLY++ AA P +ED ED EMDEE+V +DELL+ + +
Sbjct: 18 TVLCCQCGNPIAANPSMMCAHCLSVRSDITEGIATQLSVHRCRGCERWLRPSWVTAELESKELMALCLRKIKGLSKVNLVDAQWIWTEPHSMRLKIKVTIQKEVDGGAILQQSFVVEFVIRNQQCEDCQKQYTDGTWKAVVQVRQRVDHKRTFYYLEQLLLKHNVHSRCISIQSFRDGMDFYFAEKNEAVRFTDFLQGNIPVR----------IKNTKKLISSDNHSNIFNFKFTFLCIIIPLCKDDLTVLPVRLAKTLSDISPLVLVERVTRLVHLVDPLTCDRATFDSDHYGKLTSGVESSFGGIMSAPRLIEYIVLGIEPILASERAGAASKVFKS-KTRLAHVEVARASDLGVNDTKFHTVSHLGHILRTGDTVLGYDVSAANLDDADVARIEKRRALPEVVLVRKLYGVESQR------RGWTLRKLEYDA--VEEPTRTRKKDDMESDSADYERFIQQLEGDKEMRKHVNLYRREAGPRKAAAAAVDPLEEDEGEED--EMDEEQVHIDELLEGLDI 519
BLAST of mRNA_Ecto-sp9_F_contig1099.858.1 vs.
Match: 60S (ribosomal export protein NMD3 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0RPV6_SAPDV) HSP 1 Score: 500 bits (1287), Expect = 3.720e-164 Identity = 263/523 (50.29%), Postives = 351/523 (67.11%), Query Frame = 2
Query: 200 PEKQMPTILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDTCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTKASRSRGKFCFVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFVDPLTAQTADVTEEKYWRYEFPALLSSTRLVPYVVLGTEPLPEKARPSAPRRGHRIRKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLGYDVSSA--NLPEGEATGDLKGRLPDVVLVRKVYPRHDREGGGKADRHWKLGELEKDGGDXXXXXXVSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQGLAAKPPPADEDGAMEDVEEMDEEE----VRLDELLDAMTLD 1750
PE+ +P ILCCMC++PI N +MCV C++ QVD+TEGI + MHQCRGC ++ RP WV +LESREL+A+CL+KISGL KVKLVDA W+WTEPHS+RLK+KLTVQKEV NGA+LQQ+ VVTF+VRNQQCD C A+FTNN+W AVVQVRQ+VDHKRTFFYLEQLILKH H + ++I++ DG+DF+F E++H+ RFVDFL VP K +K +KKL+SADNHSN N+ +TY V L VCKDDLV LP +LA LGNIS L + ++TS++ +DP T Q A++ +KYWRY F AL SS +LV Y VL + PL P R +R K R+AE+E+ R D G ND R +HLG +L GDT +GYD+S++ N + + + LPDV+LVRK + R + K R+WKL +E +K ++ E DY+ FL +LE DK+MR ++N+YK D+D A +D + D++E + ++ELLD M ++
Sbjct: 5 PEQSLPNILCCMCAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKWSRPPWVAAELESRELLAICLKKISGLNKVKLVDAGWVWTEPHSKRLKLKLTVQKEVMNGAILQQSFVVTFIVRNQQCDECQASFTNNSWKAVVQVRQKVDHKRTFFYLEQLILKHRVHEKTSSIESHPDGVDFFFVERNHALRFVDFLSETVPIK----------LKTAKKLISADNHSNTANYKFTYAVDLATVCKDDLVALPLKLARQLGNISSLCIVTQVTSSIHVIDPFTMQRAEIDNDKYWRYPFKALRSSKQLVEYTVLDSNPLQIPTLGGVPVRTNR--KTRLAEMEIVRNSDFGVNDTRFQTTTHLGMLLNVGDTAMGYDLSTSVFNDSDTKPLDEAGITLPDVILVRKQFLRRVQ----KRSRNWKLKNIE-----GIESAVPVKKAEQTKTEMDYQHFLDELEDDKEMRSKINIYK---------VDDDKAGDDQDMEDDDEGTGVIPVEELLDDMKIE 497
BLAST of mRNA_Ecto-sp9_F_contig1099.858.1 vs.
Match: 60S (ribosomal export protein NMD3 n=18 Tax=Peronosporaceae TaxID=4777 RepID=D0MSQ0_PHYIT) HSP 1 Score: 498 bits (1282), Expect = 2.380e-163 Identity = 270/524 (51.53%), Postives = 357/524 (68.13%), Query Frame = 2
Query: 209 QMPTILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDTCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTKASRSRGKFCFVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFVDPLTAQTADVTEEKYWRYEFPALLSSTRLVPYVVLGTEPLPEKARPSAPRRGHRI-RKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLGYDVSSANLPEGEATGDLKG--RLPDVVLVRKVYPRHDREGGGKADRHWKLGELEKDGGDXXXXXXVSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQGLAAKPP-PADEDGAMEDVEEMDEEEVRLDELLDAMTLDNANAGP 1768
QMPTILCCMC+ PI N + CV C+++QVD+TEGI + +HQCRGC R+ RP WV +LESREL+A+CL+KI+ L +VKL+DA+WIWTEPHSRRLK+KLTVQKEV + ++QQ+ VVTFVVRNQQCD C A+F N +W AVVQVRQRVDHKRTFF+LEQLILKH AH + TNI++ DG+DF+F+E++H+ RFVDFL+ VP K VK +KKL+SADNHSN N+ +TY V + PVCKDDLVLLP +LA LGN+S L + Q +TS++ VDP T Q A+V EKYWRY F AL S + VL + P+ A PS R R+ RK R+A++E+ R+ D G ND R VSHLG +L GD+ GYD++SA + + ++ LPDVVLV+K++PR + K R+WKL ++E K D + E+DYE+F+ +LE DK+MR Q+NLYK KP PA++D AM D +++ V L ELLD + + + + P
Sbjct: 7 QMPTILCCMCATPIVANAANTCVSCLKSQVDVTEGIPKEVIIHQCRGCMRWSRPPWVAAELESRELLAMCLKKINNLNRVKLIDANWIWTEPHSRRLKLKLTVQKEVLSKMIMQQSFVVTFVVRNQQCDACQASFANQSWRAVVQVRQRVDHKRTFFFLEQLILKHRAHEKTTNIESHPDGVDFFFSERNHALRFVDFLQESVPMK----------VKTAKKLISADNHSNTHNYKFTYAVEIAPVCKDDLVLLPVKLARMLGNMSCLCLVQSVTSSIHVVDPFTTQVAEVDSEKYWRYPFRALRSIKAMTDLTVLDSNPM---AIPSGGGRAIRVTRKTRLADMEVVRDADFGVNDTRFRTVSHLGMLLHVGDSARGYDLTSAVFNDADLVPLVQSGLTLPDVVLVKKMFPRRIQ----KRARNWKLKKME-----GVEQAGPVRKADLSKEEQDYEQFMDELEEDKEMRSQINLYKD--ETKPAQPAEDDDAM-DEDDVGAPAVELHELLDDLAMKDDDPTP 505
BLAST of mRNA_Ecto-sp9_F_contig1099.858.1 vs.
Match: 60S (ribosomal export protein NMD3 n=9 Tax=Peronosporaceae TaxID=4777 RepID=W2I7I2_PHYPR) HSP 1 Score: 498 bits (1281), Expect = 3.130e-163 Identity = 268/517 (51.84%), Postives = 353/517 (68.28%), Query Frame = 2
Query: 209 QMPTILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDTCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTKASRSRGKFCFVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFVDPLTAQTADVTEEKYWRYEFPALLSSTRLVPYVVLGTEPLPEKARPSAPRRGHRI-RKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLGYDVSSANLPEGEATGDLKG--RLPDVVLVRKVYPRHDREGGGKADRHWKLGELEKDGGDXXXXXXVSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQGLAAKPP-PADEDGAMEDVEEMDEEEVRLDELLDAMTL 1747
QMPTILCCMC+ PI N + CV C+++QVD+TEGI + +HQCRGC R+ RP WV +LESREL+A+CL+KI+ L +VKL+DA+WIWTEPHSRRLK+KLTVQKEV + ++QQ+ VVTFVVRNQQCD C A+F N +W AVVQVRQRVDHKRTFF+LEQLILKH AH + TNI++ DG+DF+F+E++H+ RFVDFL+ VP K VK +KKL+SADNHSN N+ +TY V + PVCKDDLVLLP +LA LGN+S L + Q +TS++ VDP T Q A++ EKYWRY F AL S + + VL + P+ A PS R R+ RK R+A++E+ R+ D G ND R VSHLG +L GD+ GYD++SA + + ++ LPDVVLV+K++PR + K R+WKL ++E K D + E+DYE+FL +LE DK++R Q+NLYK KP PAD+D ED ++ V L ELLD + +
Sbjct: 7 QMPTILCCMCATPIVANAANTCVSCLKSQVDVTEGIPKEVIIHQCRGCMRWSRPPWVAAELESRELLAMCLKKINNLNRVKLIDANWIWTEPHSRRLKLKLTVQKEVMSKMIMQQSFVVTFVVRNQQCDACQASFANQSWRAVVQVRQRVDHKRTFFFLEQLILKHRAHEKTTNIESHPDGVDFFFSERNHALRFVDFLQESVPMK----------VKTAKKLISADNHSNTHNYKFTYAVEIAPVCKDDLVLLPVKLARMLGNMSCLCLVQSVTSSIHVVDPFTTQVAEIDSEKYWRYPFRALRSIKAMTDFTVLDSNPM---AIPSGGGRAIRVTRKTRLADMEVVRDADFGVNDTRFRTVSHLGMLLHVGDSARGYDLTSAVFNDADLVPLVQSGMTLPDVVLVKKMFPRRIQ----KRARNWKLKKME-----GVEQAGPVRKTDLSKEEQDYEQFLDELEEDKELRSQINLYKDDT--KPAKPADDDAMEED--DVGAPAVELHELLDDLAM 497
BLAST of mRNA_Ecto-sp9_F_contig1099.858.1 vs.
Match: 60S (ribosomal export protein NMD3 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWA3_9STRA) HSP 1 Score: 493 bits (1269), Expect = 1.810e-161 Identity = 261/523 (49.90%), Postives = 345/523 (65.97%), Query Frame = 2
Query: 203 EKQMPTILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDTCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTKASRSRGKFCFVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFVDPLTAQTADVTEEKYWRYEFPALLSSTRLVPYVVLGTEPLPEKARPSAPRRGHRIRKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLGYDVSSA--NLPEGEATGDLKGRLPDVVLVRKVYPRHDREGGGKADRHWKLGELEKDGGDXXXXXXVSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQGLAAKPPPADEDGAMEDVEEMDEEEVRLDELLDAMTLDNANAG 1765
E +P ILCC+C++PI N +MCV C++ QVD+TEGI + MHQCRGC ++ RP WV +LESREL+A+CL+KI+GL KVKLVDA WIWTEPHS+RLK+KLTVQKEV NGA+LQQ+ +VTF+VRNQQCD C A+FTN++W AVVQVRQ+V+HKRTFFYLEQLILKH H + TNI++ DG+DF+F E++H+ RFVDFL+ VP +K +KKL+SADNHSN N+ +TY V + PVCKDDLV LP +LA LGNIS L + ++TS++ +DP T Q A++ EKYWRY F AL SS +L Y VL + P+ + P R +R K R+AE+E+ R D G ND R VSHLG +L GDT +GYD+ ++ N + + + LPDVVLVRK + R + K R WKL +E + +K D + DYE FL LE DK+MR ++N+YK +E+ D ++ LDELLD MT+++ G
Sbjct: 5 EHSLPDILCCICAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKWSRPQWVSAELESRELLAICLKKITGLNKVKLVDAGWIWTEPHSKRLKLKLTVQKEVMNGAILQQSFIVTFIVRNQQCDECQASFTNHSWKAVVQVRQKVEHKRTFFYLEQLILKHRVHEKTTNIESQPDGVDFFFVERNHALRFVDFLQETVPIS----------LKTAKKLISADNHSNTANYKFTYAVDIAPVCKDDLVALPLKLARQLGNISSLCLVTQVTSSIHVIDPFTMQRAEIENEKYWRYPFKALRSSKQLTEYTVLDSTPMEIPMKGGVPVRTNR--KTRLAELEIVRNSDFGVNDTRFQTVSHLGMLLNVGDTAMGYDLVTSVFNDADTKPLDEAGITLPDVVLVRKQFLRRVQ----KRQRKWKLKTIE-------GIESMGKKDDPTKHDLDYEHFLNDLEQDKEMRSRINIYKNDEXX----XXXXXXXASMEDGDGGDIPLDELLDDMTMEDQENG 500
BLAST of mRNA_Ecto-sp9_F_contig1099.858.1 vs.
Match: 60S (ribosomal export protein NMD3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWI9_9STRA) HSP 1 Score: 494 bits (1272), Expect = 1.690e-160 Identity = 282/572 (49.30%), Postives = 368/572 (64.34%), Query Frame = 2
Query: 224 LCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLR----PGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDTCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTKASRSRGKFCFVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFVDPLTAQTADVTEEKYWR--YEFPALLSSTRLVPYVVLGTEPLPEKARPSAPRRGHRIRKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLGYDVSSANLPEGEATG-DLKGR--LPDVVLVRKVYPRHDREGGGKADRHWKLGELEKDGGDXXXXXXVSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQGLAAKPPPADED--------------------------------------------GAMEDVEEMDEEEVRLDELLDAMTLDNANAGPDGEE 1780
+CCMC++ I PNPT+MC+ C+RTQV+I G++T +TMHQCRGC +Y+ GW + ESRELMAVCLRK++GL +++LVDA WIWTEPHS+RLK+KLTVQ+EV NGAVLQ+A+VV FVVRNQQC C A++T W A+VQVRQRVDHKRTF +LEQLILKHNAH+Q IQ F DGMDFYF E++ +ARF +FLE P + VK SKKLVS D+HSN+FN+ YT ++ +VPVCKDDLV+LP +LA++LG+I+RL + R+ + + +DPLT QTA+V+ EKY + +EF ALLS++RLV ++VLG+EP + SAP R R ++ R+AEVE+A DLG ND R +HLGHILRAGDTVLGY +++A+L +A + K R LPD VLVRKVY G+ W+L + E D V E + ++D + QQLE D++MRR+VN+YK G D D G EDV E DEE +RLDELLD + LD+ +A PD E
Sbjct: 18 ICCMCAINIQPNPTNMCLQCLRTQVNIASGLSTRVTMHQCRGCLKYMGGSGGTGWSHYEAESRELMAVCLRKVAGLNRLRLVDAGWIWTEPHSKRLKLKLTVQQEVMNGAVLQEAVVVEFVVRNQQCPDCQASYTIGAWKAIVQVRQRVDHKRTFLHLEQLILKHNAHAQALQIQGFADGMDFYFAERNQAARFTEFLETACPVR----------VKQSKKLVSQDDHSNVFNYKYTTIIEIVPVCKDDLVILPTKLAQNLGDIARLCLVLRVLNHLHLIDPLTGQTAEVSVEKYHKAGFEFRALLSASRLVEFMVLGSEPALAPTKTSAPAR--RSKRHRLAEVEVALMSDLGANDTRYRVFTHLGHILRAGDTVLGYLLATASLNSADADELETKTRAGLPDAVLVRKVYSNE-----GRIRPAWRLKKFEAD------EMEVVEAGNAEQEDRDLRDYRQQLEGDREMRRRVNMYKAGRPLPGGAEDTDHENAALGQKAGKTKGKVEKMTVVSAMGEGDGSTRLDERDRSTNEGLGEDVGEDDEEALRLDELLDDLELDDPDAPPDDHE 566
BLAST of mRNA_Ecto-sp9_F_contig1099.858.1 vs.
Match: 60S (ribosomal export protein NMD3 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1APN2_PLAHL) HSP 1 Score: 488 bits (1255), Expect = 2.300e-159 Identity = 263/527 (49.91%), Postives = 349/527 (66.22%), Query Frame = 2
Query: 212 MPTILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDTCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTKASRSRGKFCFVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFVDPLTAQTADVTEEKYWRYEFPALLSSTRLVPYVVLGTEPLPEKARPSAPRRGHRI-RKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLGYDVSSANLPEGEATGDLKG--RLPDVVLVRKVYPRHDREGGGKADRHWKLGELEKDGGDXXXXXXVSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQGLAAKPPPADEDGAMEDVEEMDEEE-----VRLDELLDAMTLDNANAGP 1768
MPTILCCMC+ PI N + CV C+++QVD+TEGI + +HQCRGC R+ RP WV LESREL+A+CL+KI+ L +VKL+DA+W+WTEPHSRRLK+KLTVQKEV + ++QQA VVTFVVRNQQCD C A+F N +W AVVQVRQRVDHKRTFF+LEQLILKH AH + TNI++ DG+DF+F+E++H+ RFVDFL+ VP K VK +KKL+SADNHSN N+ +TY V + PVCKDDLV+LP +LA LGNIS L + Q +TS++ VDP T Q A++ EKYWRY F AL S + + +L + P+ A PS R R+ RK R+A++E+ R+ D G ND R VSHLG IL AGD+ GYD++SA + + ++ +PDVVLV+K +P + K R+WKL ++E K D + E+DYE+FL +LE +KD+R Q+NLYK MED +E++ V L ELLD + + + + P
Sbjct: 5 MPTILCCMCATPIVANAANTCVSCLKSQVDVTEGIPKEVIIHQCRGCMRWSRPPWVAADLESRELLALCLKKITNLNRVKLIDANWVWTEPHSRRLKLKLTVQKEVLSKMIMQQAFVVTFVVRNQQCDACQASFANQSWRAVVQVRQRVDHKRTFFFLEQLILKHRAHEKTTNIESHPDGVDFFFSERNHALRFVDFLQESVPMK----------VKTAKKLISADNHSNTHNYKFTYAVEIAPVCKDDLVVLPVKLARMLGNISCLCLIQSVTSSIHVVDPFTTQVAEIDSEKYWRYPFHALRSIKAMSNFTILDSSPM---AIPSGGGRAIRVSRKTRLADLEIVRDVDFGVNDTRFRTVSHLGMILHAGDSARGYDLTSAVFNDADLVPLVQSGISMPDVVLVKKTFPSRIQ----KRTRNWKLKKIE-----GVEQAGTVRKTDLSKEEQDYEQFLDELEENKDLRSQINLYKDETKLSE-------RMEDNNTFEEDDAGAPAVELHELLDDLVMRDDESAP 502
BLAST of mRNA_Ecto-sp9_F_contig1099.858.1 vs.
Match: 60S (ribosomal export protein NMD3 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E8L1_BRELC) HSP 1 Score: 487 bits (1253), Expect = 4.890e-159 Identity = 262/538 (48.70%), Postives = 357/538 (66.36%), Query Frame = 2
Query: 209 QMPTILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDTCAAAFTNNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTKASRSRGKFCFVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFVDPLTAQTADVTEEKYWRYEFPALLSSTRLVPYVVLGTEPLPEKARPSAPRRG-HRIRKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLGYDVSSANLPEGEATGDLKG--RLPDVVLVRKVYPRHDREGGGKADRHWKLGELEKDGGDXXXXXXVSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQGLAAKPPPADEDGAMEDVEEMDEEEVRLDELLDAMTLDNANAGPDGEEDLGAASASIFE 1813
QMPTILCC+C+ PI N + CV C+++QVD+TEGI + +HQCRGC R+ RP WV +LESREL+A+CL+KI+ L +VKL+DA+W+WTEPHSRRLK+KLTVQKEV + ++QQ+ VVTFVVRNQQCD C A+F N +W AVVQVRQRVDHKRTFFYLEQLILKH AH + T I++ DG+DF+F+E++H+ RF+DFL+ VP K +K +KKL+SADNHSN N+ +TY V + PVCKDDLV+LP +LA LGNIS L + +TS++ VDP + Q A+V EKYWRY F AL S + + +L + P+ A PS R H RK R+A++E+ R+ D G ND R VSHLG IL GD GYD++SA + + ++ LPDVVLV+KV+PR + K R+WKL ++E + + D + ++DYE+FL +LE DK++R ++NLYK D+D AM + ++M V L ELLD + + + ++ A AS++E
Sbjct: 4 QMPTILCCLCATPIVANAANTCVNCLKSQVDVTEGINKEIIIHQCRGCMRWSRPPWVAAELESRELLAMCLKKINNLNRVKLIDANWVWTEPHSRRLKLKLTVQKEVLSKMIMQQSFVVTFVVRNQQCDACQASFANQSWRAVVQVRQRVDHKRTFFYLEQLILKHRAHEKTTTIESHPDGVDFFFSERNHALRFIDFLQESVPMK----------LKTAKKLISADNHSNTHNYKFTYAVEIAPVCKDDLVVLPLKLARMLGNISCLCLVASVTSSIHVVDPFSTQVAEVDSEKYWRYPFRALRSIKTMSDFTILDSNPM---AIPSGGGRAIHVTRKTRLADMEIVRDSDFGVNDTRFRTVSHLGMILHVGDFARGYDLTSAVFNDADLIPLVQSGTALPDVVLVKKVFPRRIQ----KRARNWKLKKME----GVEHAGPIRKTTDLSKEDRDYEQFLDELEEDKELRSKINLYKIETTVSKHVKDDDDAMVE-DDMGAPSVELHELLDDLAVKETESTLQILSEVEAKQASVWE 519 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1099.858.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig1099.858.1 >prot_Ecto-sp9_F_contig1099.858.1 ID=prot_Ecto-sp9_F_contig1099.858.1|Name=mRNA_Ecto-sp9_F_contig1099.858.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=576bp MEVVAPPTDGLAAPPPPEPEKQMPTILCCMCSLPIPPNPTSMCVLCIRTQback to top mRNA from alignment at Ecto-sp9_F_contig1099:12155..17046+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig1099.858.1 ID=mRNA_Ecto-sp9_F_contig1099.858.1|Name=mRNA_Ecto-sp9_F_contig1099.858.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=4892bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1099:12155..17046+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1099:12155..17046+ >mRNA_Ecto-sp9_F_contig1099.858.1 ID=mRNA_Ecto-sp9_F_contig1099.858.1|Name=mRNA_Ecto-sp9_F_contig1099.858.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=3456bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1099:12155..17046+ (Ectocarpus species9 EcSCA_722f female)back to top |