mRNA_Ecto-sp9_F_contig10706.629.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig10706.629.1 vs.
Match: Dolichyl-diphosphooligosaccharide--protein (glycotransferase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=I2CR01_NANGC) HSP 1 Score: 212 bits (539), Expect = 9.620e-61 Identity = 108/182 (59.34%), Postives = 134/182 (73.63%), Query Frame = 1
Query: 1 TRYIPIIASVSEHQPTTWTSFYFDLNILVPLSPVGLWLLYQRPTDGAIFVIIYGTLSWYFAGVMVRLMLTLAPIACILAAVGMSSLLQRFTALLRFGGXXXXXXXXXXXXXXXXXXXXXXXXXXGVGRGLAFAVTLGATLLMCFYSMHSSYVSSLAYSSPSIVIEAGRTQSGQRILYDDYRE 546
T+YIPIIASVSEHQPTTWTSF+FDL+ILVP SPVGL+ L+Q P+DGAIF+I+YGTLSWYFAGVMVRLMLTLAPIACIL+A+G+S++L+RF A L G GL+ V +G TLL+C + H++YVSS+AYSSPSIVI+AGR G+R+++DDYRE
Sbjct: 385 TKYIPIIASVSEHQPTTWTSFFFDLHILVPFSPVGLYFLFQNPSDGAIFLILYGTLSWYFAGVMVRLMLTLAPIACILSAIGISAILRRFAAHLAPDGNGFLSFFSPKPSKKEGAKPSSTPPS-----GLSLVVLVGMTLLLCLFGYHANYVSSIAYSSPSIVIDAGRMPDGRRVMFDDYRE 561
BLAST of mRNA_Ecto-sp9_F_contig10706.629.1 vs.
Match: Dolichyl-diphosphooligosaccharide--protein (glycotransferase n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8W8_HETAK) HSP 1 Score: 210 bits (535), Expect = 4.270e-60 Identity = 114/187 (60.96%), Postives = 136/187 (72.73%), Query Frame = 1
Query: 1 TRYIPIIASVSEHQPTTWTSFYFDLNILVPLSPVGLWLLYQRPTDGAIFVIIYGTLSWYFAGVMVRLMLTLAPIACILAAVGMSSLLQRFTALLRFGGXXXXXXXXXXXXXXXXXXXXXXXXXXG-----VGRGLAFAVTLGATLLMCFYSMHSSYVSSLAYSSPSIVIEAGRTQSGQRILYDDYRE 546
T+YIPIIASVSEHQPTTWTSF+FDL+ILVPL+PVGL+ L+ TD ++FVIIYGTL+WYFAGVMVRL+LTLAPIACILAAVGMS +LQ+F +L XXXX G + R +A V G +LL+CFY HS+YVSS+AYSSPSIVI+AGR GQR++YDDYRE
Sbjct: 390 TKYIPIIASVSEHQPTTWTSFFFDLHILVPLAPVGLFFLFADVTDASMFVIIYGTLAWYFAGVMVRLLLTLAPIACILAAVGMSRVLQKFAGILALTSSSSXXXXKGEGDERGSEAKRGKRKGAGGPAAPLSRSMALLVLGGCSLLLCFYGYHSTYVSSMAYSSPSIVIDAGRRPDGQRVMYDDYRE 576
BLAST of mRNA_Ecto-sp9_F_contig10706.629.1 vs.
Match: Dolichyl-diphosphooligosaccharide--protein (glycotransferase n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U4D8_9STRA) HSP 1 Score: 203 bits (517), Expect = 1.130e-57 Identity = 112/182 (61.54%), Postives = 136/182 (74.73%), Query Frame = 1
Query: 1 TRYIPIIASVSEHQPTTWTSFYFDLNILVPLSPVGLWLLYQRPTDGAIFVIIYGTLSWYFAGVMVRLMLTLAPIACILAAVGMSSLLQRFTALLRFGGXXXXXXXXXXXXXXXXXXXXXXXXXXGVGRGLAFAVTLGATLLMCFYSMHSSYVSSLAYSSPSIVIEAGRTQSGQRILYDDYRE 546
T+YIPIIASVSEHQPTTWTSF+FDL++LVPL+PVGL+ L+ +DG IFVI+YGT++WYFAGVMVRLMLTLAPIACIL+A+G+S LLQRF++ L F XXXXX + + L V LG T L+ FY H++YVSS+AYSSPSIVIEAGR +G R+LYDDYRE
Sbjct: 385 TKYIPIIASVSEHQPTTWTSFFFDLHVLVPLAPVGLYFLFDDISDGGIFVILYGTVAWYFAGVMVRLMLTLAPIACILSAIGISKLLQRFSSQLVFEDEPTSAGXXXXXKAKPKYASLKDL----LNKPLQLLVLLGCTGLLGFYGFHATYVSSMAYSSPSIVIEAGRMANGARVLYDDYRE 562
BLAST of mRNA_Ecto-sp9_F_contig10706.629.1 vs.
Match: Dolichyl-diphosphooligosaccharide--protein (glycotransferase n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0UCW9_9STRA) HSP 1 Score: 202 bits (513), Expect = 4.090e-57 Identity = 106/182 (58.24%), Postives = 129/182 (70.88%), Query Frame = 1
Query: 1 TRYIPIIASVSEHQPTTWTSFYFDLNILVPLSPVGLWLLYQRPTDGAIFVIIYGTLSWYFAGVMVRLMLTLAPIACILAAVGMSSLLQRFTALLRFGGXXXXXXXXXXXXXXXXXXXXXXXXXXGVGRGLAFAVTLGATLLMCFYSMHSSYVSSLAYSSPSIVIEAGRTQSGQRILYDDYRE 546
T+YIPIIASVSEHQPTTWTSF+FDL++LVPL+PVGL+ L+ +DG IFVI+YGT++WYFAGVMVRLMLTLAPIACIL+A+G S LLQRF+A L++ + + L V LG L+ FY H+SYVSS+AYSSPSIVIE GR +G R+LYDDYRE
Sbjct: 384 TKYIPIIASVSEHQPTTWTSFFFDLHVLVPLAPVGLFFLFDEISDGGIFVILYGTVAWYFAGVMVRLMLTLAPIACILSAIGFSKLLQRFSAQLKYEDEPTSAKGSERAKLTSTRDL--------LNKPLQVIVLLGGLGLLSFYGYHASYVSSMAYSSPSIVIEGGRYANGVRVLYDDYRE 557
BLAST of mRNA_Ecto-sp9_F_contig10706.629.1 vs.
Match: Dolichyl-diphosphooligosaccharide--protein (glycotransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1M3_9STRA) HSP 1 Score: 201 bits (510), Expect = 1.090e-56 Identity = 130/184 (70.65%), Postives = 151/184 (82.07%), Query Frame = 1
Query: 4 RYIPIIASVSEHQPTTWTSFYFDLNILVPLSPVGLWLLYQRPTDGAIFVIIYGTLSWYFAGVMVRLMLTLAPIACILAAVGMSSLLQRFTALLRFGGXXXXXXXXXXXXXXXXXXXXXXXXXXGVG---RGLAFAVTLGATLLMCFYSMHSSYVSSLAYSSPSIVIEAGRTQSGQRILYDDYRE 546
+YIPIIASVSEHQPTTWTSF+FDL++LVPL+PVGL LL++R TDGA+FV+IYGTLSWYFAGVMVRLMLTLAPIACILAAV MS LL R+ + +G XXXXXXXXXXXXXXXXXXXXXXX G + L+F V GA MC Y+ HS+Y SS+AYS+PSIVIE R + G R++YDDYRE
Sbjct: 384 KYIPIIASVSEHQPTTWTSFFFDLHVLVPLAPVGLLLLFRRVTDGALFVLIYGTLSWYFAGVMVRLMLTLAPIACILAAVAMSELLHRYCGAIAYGDAPXXXXXXXXXXXXXXXXXXXXXXXGPPGLLNQPLSFVVVAGALATMCLYAFHSTYASSIAYSNPSIVIEQ-RLRDGGRLIYDDYRE 566
BLAST of mRNA_Ecto-sp9_F_contig10706.629.1 vs.
Match: Dolichyl-diphosphooligosaccharide--protein (glycotransferase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H9K2_9STRA) HSP 1 Score: 200 bits (509), Expect = 1.270e-56 Identity = 104/183 (56.83%), Postives = 132/183 (72.13%), Query Frame = 1
Query: 4 RYIPIIASVSEHQPTTWTSFYFDLNILVPLSPVGLWLLYQRPTDGAIFVIIYGTLSWYFAGVMVRLMLTLAPIACILAAVGMSSLLQRFTALLR--FGGXXXXXXXXXXXXXXXXXXXXXXXXXXGVGRGLAFAVTLGATLLMCFYSMHSSYVSSLAYSSPSIVIEAGRTQSGQRILYDDYRE 546
+Y+PIIASVSEHQPTTWTSF+FDL+ILVPL+PVGL+ L+ TDG +FVI+YGTL+WYFAGVMVRLMLTLAPIAC+LAA+G+SS++ RF+A L+ FG + L+ V GA L+ +S H++YVSS+AYSSPSIVI+AGRT G+R++YDDYRE
Sbjct: 374 KYLPIIASVSEHQPTTWTSFFFDLHILVPLAPVGLFTLFSNITDGGVFVILYGTLAWYFAGVMVRLMLTLAPIACVLAAIGLSSIMTRFSAFLKGSFGPPPSNKNTPT------------------LSPALSVIVLGGAAALLVMFSYHATYVSSMAYSSPSIVIDAGRTADGRRVMYDDYRE 538
BLAST of mRNA_Ecto-sp9_F_contig10706.629.1 vs.
Match: Dolichyl-diphosphooligosaccharide--protein (glycotransferase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9Z2X8_9STRA) HSP 1 Score: 200 bits (509), Expect = 1.380e-56 Identity = 104/181 (57.46%), Postives = 128/181 (70.72%), Query Frame = 1
Query: 4 RYIPIIASVSEHQPTTWTSFYFDLNILVPLSPVGLWLLYQRPTDGAIFVIIYGTLSWYFAGVMVRLMLTLAPIACILAAVGMSSLLQRFTALLRFGGXXXXXXXXXXXXXXXXXXXXXXXXXXGVGRGLAFAVTLGATLLMCFYSMHSSYVSSLAYSSPSIVIEAGRTQSGQRILYDDYRE 546
+YIPIIASVSEHQPTTWTS++FDL+ILVP +PVGL+ +Y+ TDG IFVI+YGT++WYFAGVMVRLMLTLAPIACILAAVG+S+ L++F L V G A V + T L+ Y H++YVSS+AYSSPSIVIEAGRTQSG+R+++DDYRE
Sbjct: 386 KYIPIIASVSEHQPTTWTSYFFDLHILVPFAPVGLYFMYKNLTDGGIFVILYGTVAWYFAGVMVRLMLTLAPIACILAAVGISATLRKFMGFLH--------------RSFQSPAPPLKNGVQDVHSGFALIVVMVLTALLLSYQFHAAYVSSMAYSSPSIVIEAGRTQSGERVVFDDYRE 552
BLAST of mRNA_Ecto-sp9_F_contig10706.629.1 vs.
Match: Dolichyl-diphosphooligosaccharide--protein (glycotransferase n=16 Tax=Peronosporaceae TaxID=4777 RepID=D0MRA6_PHYIT) HSP 1 Score: 199 bits (505), Expect = 3.820e-56 Identity = 103/181 (56.91%), Postives = 130/181 (71.82%), Query Frame = 1
Query: 4 RYIPIIASVSEHQPTTWTSFYFDLNILVPLSPVGLWLLYQRPTDGAIFVIIYGTLSWYFAGVMVRLMLTLAPIACILAAVGMSSLLQRFTALLRFGGXXXXXXXXXXXXXXXXXXXXXXXXXXGVGRGLAFAVTLGATLLMCFYSMHSSYVSSLAYSSPSIVIEAGRTQSGQRILYDDYRE 546
+YIPIIASVSEHQPTTWTS++FDL+ILVP +PVGL+ L+Q TDG IFVI+YGT++WYFAGVMVRLMLTLAPIACIL AVG+SS L++F +L V + LA + G L++ Y++H++YVSS+AYSSPSIVIEAGRTQ+G+R+ +DDYRE
Sbjct: 385 KYIPIIASVSEHQPTTWTSYFFDLHILVPFAPVGLYFLFQNLTDGGIFVILYGTVAWYFAGVMVRLMLTLAPIACILGAVGISSTLRKFMGILA----------------RPSTFVVQKDGVQPVPKILALGIVSGLLLMLLSYTLHATYVSSMAYSSPSIVIEAGRTQTGERVNFDDYRE 549
BLAST of mRNA_Ecto-sp9_F_contig10706.629.1 vs.
Match: Dolichyl-diphosphooligosaccharide--protein (glycotransferase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E0M2_BRELC) HSP 1 Score: 198 bits (504), Expect = 6.620e-56 Identity = 105/181 (58.01%), Postives = 129/181 (71.27%), Query Frame = 1
Query: 4 RYIPIIASVSEHQPTTWTSFYFDLNILVPLSPVGLWLLYQRPTDGAIFVIIYGTLSWYFAGVMVRLMLTLAPIACILAAVGMSSLLQRFTALLRFGGXXXXXXXXXXXXXXXXXXXXXXXXXXGVGRGLAFAVTLGATLLMCFYSMHSSYVSSLAYSSPSIVIEAGRTQSGQRILYDDYRE 546
+YIPIIASVSEHQPTTWTS++FDL+ILVP +PVGL+ L+Q TDG IFVI+YGT+SWYFAGVMVRLMLTLAPIACIL AVG+SS L +F +L V + +A +V G ++M YS H++YVSS+AYSSPSIVIEAGRTQ+G+R+ +DDYRE
Sbjct: 383 KYIPIIASVSEHQPTTWTSYFFDLHILVPFAPVGLYFLFQNLTDGGIFVILYGTVSWYFAGVMVRLMLTLAPIACILGAVGISSTLCKFMGVLA----------------RPSTFVVSLDGVQSVHKLVALSVVGGLLMMMLSYSFHATYVSSMAYSSPSIVIEAGRTQTGERVNFDDYRE 547
BLAST of mRNA_Ecto-sp9_F_contig10706.629.1 vs.
Match: Dolichyl-diphosphooligosaccharide--protein (glycotransferase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VAL3_9STRA) HSP 1 Score: 197 bits (501), Expect = 1.750e-55 Identity = 102/181 (56.35%), Postives = 128/181 (70.72%), Query Frame = 1
Query: 4 RYIPIIASVSEHQPTTWTSFYFDLNILVPLSPVGLWLLYQRPTDGAIFVIIYGTLSWYFAGVMVRLMLTLAPIACILAAVGMSSLLQRFTALLRFGGXXXXXXXXXXXXXXXXXXXXXXXXXXGVGRGLAFAVTLGATLLMCFYSMHSSYVSSLAYSSPSIVIEAGRTQSGQRILYDDYRE 546
+YIPIIASVSEHQPT WTS++FDL+I+VP +PVGL+ L+Q TDG IFVI+YGT++WYFAGVMVRLMLTLAPIACIL AVG+SS L++F +L V + LA V G ++ YSMH++YVSS+AYSSPSIVIEAGRT++G+ ++YDDYRE
Sbjct: 385 KYIPIIASVSEHQPTPWTSYFFDLHIMVPFAPVGLYFLFQNLTDGGIFVILYGTVAWYFAGVMVRLMLTLAPIACILGAVGISSTLRKFMGILA----------------RPSTFVVQKDGVQPVPKILALGVVTGLLFMLLSYSMHATYVSSMAYSSPSIVIEAGRTRTGEHVIYDDYRE 549 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10706.629.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig10706.629.1 >prot_Ecto-sp9_F_contig10706.629.1 ID=prot_Ecto-sp9_F_contig10706.629.1|Name=mRNA_Ecto-sp9_F_contig10706.629.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=182bp TRYIPIIASVSEHQPTTWTSFYFDLNILVPLSPVGLWLLYQRPTDGAIFVback to top mRNA from alignment at Ecto-sp9_F_contig10706:2529..3556- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig10706.629.1 ID=mRNA_Ecto-sp9_F_contig10706.629.1|Name=mRNA_Ecto-sp9_F_contig10706.629.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=1028bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10706:2529..3556- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10706:2529..3556- >mRNA_Ecto-sp9_F_contig10706.629.1 ID=mRNA_Ecto-sp9_F_contig10706.629.1|Name=mRNA_Ecto-sp9_F_contig10706.629.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1092bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10706:2529..3556- (Ectocarpus species9 EcSCA_722f female)back to top |