mRNA_Ecto-sp9_F_contig107.620.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig107.620.1
Unique NamemRNA_Ecto-sp9_F_contig107.620.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
[Close]
BLAST of mRNA_Ecto-sp9_F_contig107.620.1 vs.
Match: WD40 (repeat-containing protein SMU1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX60_ECTSI)

HSP 1 Score: 830 bits (2143), Expect = 2.100e-300
Identity = 513/516 (99.42%), Postives = 513/516 (99.42%), Query Frame = 1 
Query:    1 MSFEVESEDVIRLILQFLKENNLTKTLRALQAESSVCLNTIDNLDNLMSDINHGRWEAVMPQVSSLSLPLAKLVAVYEQLVLELLEMRELDVAREILRTADPFLQMKKEEPDRYLRLEHWLQKGAAIDPRDLYPAGSSKEKRRAEIANMLIPEVSVVPPSRLLALVNQALKWQQVQGLLPRGQKFDLFRGGARASKKDMEEKPPRKMAGQIKFGTKSHPEVARFSPDGQYLASGSVDGFVEVWDFDTCRLRKDLAYQAKDEFMMHDKAVLCSSXXXXXXXXXXXXXXXXXXXXKVSTGQCLRRFESAHTQGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFRGHTSYXXXXXXXXXXXXXXXXXXXXXXXXXXAKTTENLHTFHPALSIGSHTEASVHTVCPLPGSAEQVLVSNRTSTAFLCTLQGQVVRSFTSPKSVRADFTCACLSPKGRWVYCAGEDGELFCFDAATTEVEKTLKVSEKEIIGLAHHPHRNLLATFSNEGLLKLWKS 1548
            MSFEVESEDVIRLILQFLKENNLTKTLRALQAESSVCLNTIDNLDNLMSDINHGRWEAVMPQVSSLSLPLAKLVAVYEQLVLELLEMRELDVAREILRTADPFLQMKKEEPDRYLRLEHWLQKGAAIDPRDLYPAGSSKEKRRAEIANMLIPEVSVVPPSRLLALVNQALKWQQVQGLLPRGQKFDLFRGGARASKKDMEEKPPRKMAGQIKFGTKSHPEVARFSPDGQYLASGSVDGFVEVWDFDTCRLRKDLAYQAKDEFMMHDKAVLCSSXXXXXXXXXXXXXXXXXXXXKVSTGQCLRRFESAHTQGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFRGHTSYXXXXXXXXXXXXXXXXXXXXXXXXXX  TTENLHTFHPALSIGSHTEASVHTV PLPGSAEQVLVSNRTSTAFLCTLQGQVVRSFTSPKSVRADFTCACLSPKGRWVYCAGEDGELFCFDAATTEVEKTLKVSEKEIIGLAHHPHRNLLATFSNEGLLKLWKS
Sbjct:    1 MSFEVESEDVIRLILQFLKENNLTKTLRALQAESSVCLNTIDNLDNLMSDINHGRWEAVMPQVSSLSLPLAKLVAVYEQLVLELLEMRELDVAREILRTADPFLQMKKEEPDRYLRLEHWLQKGAAIDPRDLYPAGSSKEKRRAEIANMLIPEVSVVPPSRLLALVNQALKWQQVQGLLPRGQKFDLFRGGARASKKDMEEKPPRKMAGQIKFGTKSHPEVARFSPDGQYLASGSVDGFVEVWDFDTCRLRKDLAYQAKDEFMMHDKAVLCSSXXXXXXXXXXXXXXXXXXXXKVSTGQCLRRFESAHTQGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFRGHTSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTENLHTFHPALSIGSHTEASVHTVRPLPGSAEQVLVSNRTSTAFLCTLQGQVVRSFTSPKSVRADFTCACLSPKGRWVYCAGEDGELFCFDAATTEVEKTLKVSEKEIIGLAHHPHRNLLATFSNEGLLKLWKS 516
[Close]
BLAST of mRNA_Ecto-sp9_F_contig107.620.1 vs.
Match: WD40 (repeat-containing protein SMU1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIM7_9STRA)

HSP 1 Score: 514 bits (1325), Expect = 1.080e-175
Identity = 347/546 (63.55%), Postives = 424/546 (77.66%), Query Frame = 1 
Query:    1 MSFEVESEDVIRLILQFLKENNLTKTLRALQAESSVCLNTIDNLDNLMSDINHGRWEAVMPQVSSLSLPLAKLVAVYEQLVLELLEMRELDVAREILRTADPFLQMKKEEPDRYLRLEHWLQK-----GAAIDPRDLYPAGSSKEKRRAEIANMLIPEVSVVPPSRLLALVNQALKWQQVQGLLP---RGQKFDLFRGGARASKKDMEEKPPRKMAGQIKFGTKSHPEVARFSPDGQYLASGSVDGFVEVWDFDTCRLRKDLAYQAKDEFMMHDKAVLCSSXXXXXXXXXXXXXXXXXXXXKVSTGQCLRRFESAHTQGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFRGHTSYXXXXXXXXXXXXXXXXXXXXXXXXXXAKTTENLHTFHPALS-------------IGSHT----EASVHTVCPLPGSAEQVLVSNRTSTAFLCTLQGQVVRSFTSPKS-----VRADFTCACLSPKGRWVYCAGEDGELFCFDAATTEVEKTLKVSEKEIIGLAHHPHRNLLATFSNEGLLKLWKS 1548
            M+ E+ESEDV+RLI+Q+LKE+NLT +L+ LQ+ES VCL+T+DNLDNL SDINHGRWE+V+PQVS L+LPL  LVA+YEQ+VLELLEMRE ++ARE+LRTA+PF ++K E P+R+L+LEHW+++     G ++DPRDLY AG+S+EKRRAE+A+ ++ E SVV PSRLLAL+ QALKWQQ+QG LP    G K+DLFRG  RA ++D EE+PPRK+AGQIKFG  S PE ARFSPDG  LASG  DGF+E++D D+CRLRKDL YQAKDE MMHD AVLC    XXXXXXXXXXXXX     KVSTGQCLRRFESAH +G  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFRGH ++XXXXXXXXXXXXXXXXXXXXXXXXXX           P  +             +G  +    EA+VHT+ P+PGS+E +LV+ R++TA+L T QG VV+SF+   S        DFTCAC SP+GRWV+ A +DG++ CF+A T E+E+TL V   E+ G+ HHPHRNLLATF  +G+LKLWK+
Sbjct:    1 MALEIESEDVLRLIMQYLKEHNLTSSLKTLQSESKVCLDTVDNLDNLSSDINHGRWESVLPQVSGLALPLNTLVALYEQVVLELLEMREGELARELLRTAEPFAKLKVENPERFLKLEHWVKRACSGGGTSLDPRDLYAAGNSREKRRAEVADAVLAEASVVAPSRLLALLGQALKWQQLQGQLPPRGTGGKYDLFRGAQRARRRDEEERPPRKLAGQIKFGKDSRPESARFSPDGLSLASGGADGFIELYDPDSCRLRKDLEYQAKDELMMHDTAVLCQGFSXXXXXXXXXXXXXKLKIWKVSTGQCLRRFESAHGKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFRGHGAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRQAAIRAQAGGTGLGDVGGMSLAGMEAAVHTIVPMPGSSEHLLVATRSTTAYLITQQGAVVKSFSLDASGTGAVAGGDFTCACASPRGRWVFVASDDGKVHCFNAETGEIERTLAVGAGEVSGMTHHPHRNLLATFGKDGMLKLWKA 546
[Close]
BLAST of mRNA_Ecto-sp9_F_contig107.620.1 vs.
Match: WD40 (repeat-containing protein SMU1 (Fragment) n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YWD5_NANGC)

HSP 1 Score: 473 bits (1216), Expect = 8.150e-159
Identity = 321/514 (62.45%), Postives = 404/514 (78.60%), Query Frame = 1 
Query:    7 FEVESEDVIRLILQFLKENNLTKTLRALQAESSVCLNTIDNLDNLMSDINHGRWEAVMPQVSSLSLPLAKLVAVYEQLVLELLEMRELDVAREILRTADPFLQMKKEEPDRYLRLEHWLQKGAAIDPRDLYPAGSSKEKRRAEIANMLIPEVSVVPPSRLLALVNQALKWQQVQGLLPRGQKFDLFRGGARASKKDMEEKPPRKMAGQIKFGTKSHPEVARFSPDGQYLASGSVDGFVEVWDFDTCRLRKDLAYQAKDEFMMHDKAVLCSSXXXXXXXXXXXXXXXXXXXXKVSTGQCLRRFESAHTQGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFRGHTSYXXXXXXXXXXXXXXXXXXXXXXXXXXAKTTENLHTFHPALSIGSHTEASVHTVCPLPGSAEQVLVSNRTSTAFLCTLQGQVVRSFTSPKSVRADFTCACLSPKGRWVYCAGEDGELFCFDAATTEVEKTLKVSEKEIIGLAHHPHRNLLATFSNEGLLKLWKS 1548
            +EVE+ DVI+LILQF KENNL +TL  LQ+ES V +N++D+++N +SD+  GRW++V+PQ + L LP  KL+A+YEQ+ LEL+EMRE ++ARE+LRT +P   +K ++PDRY RLE +L +    D ++LY  G +KE+RR EIA+ L  EVSVVPPSRLLAL+ QAL++QQ+QG LP+ +++DLFRG AR++ KD  E+PP+K AGQIKFG+K+HPE ARFSPDG  L +GS+DGFVEVWD DTCRLRKDL YQA++E MMHD AVL  +XXXXXXXXXXXXXXXXXXXXK+S+G+CLR    AH++G+TXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  KEFRGH   XXXXXXXXXXXXXXXXXXXXXXXXXX       HTF P +      EA VHTV PLPG A+   ++NRTSTA++ T QGQVV+  +S K V  DF  A LSPKG + +CAGEDG ++ F     ++E  +KV EKE+IG+AHHPHRNL+ TF +EG+LK+W++
Sbjct:   62 YEVEASDVIKLILQFCKENNLHRTLHTLQSESQVAMNSVDSMENFLSDVTQGRWDSVLPQAAGLQLPQDKLLALYEQVCLELIEMRETELAREMLRTTEPLQLLKTQDPDRYFRLETFLNR-KIHDAQELYAYGLNKERRRQEIADSLAVEVSVVPPSRLLALLQQALRYQQLQGNLPKDRRYDLFRGSARSAGKDEAERPPKKQAGQIKFGSKTHPECARFSPDGLQLVTGSLDGFVEVWDPDTCRLRKDLPYQAREELMMHDAAVLALAXXXXXXXXXXXXXXXXXXXXKLSSGKCLRHLPHAHSKGITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLKEFRGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTFRPGVESAVDLEAMVHTVLPLPGGADLFFIANRTSTAYVTTAQGQVVKRMSSGKKVGGDFAAAALSPKGTFAHCAGEDGIVYSFQLGKGDLESFVKVGEKEVIGVAHHPHRNLVVTFGDEGVLKVWRA 574
[Close]
BLAST of mRNA_Ecto-sp9_F_contig107.620.1 vs.
Match: WD40 (repeat-containing protein SMU1 n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1JMW6_STRMM)

HSP 1 Score: 458 bits (1179), Expect = 4.270e-154
Identity = 312/515 (60.58%), Postives = 390/515 (75.73%), Query Frame = 1 
Query:    1 MSFEVESEDVIRLILQFLKENNLTKTLRALQAESSVCLNTIDNLDNLMSDINHGRWEAVMPQVSSLSLPLAKLVAVYEQLVLELLEMRELDVAREILRTADPFLQMKKEEPDRYLRLEHWLQKGAAIDPRDLYPAGSSKEKRRAEIANMLIPEVSVVPPSRLLALVNQALKWQQVQGLLPRGQKFDLFRGGARASKKDMEEKPPRKMAGQIKFGTKSHPEVARFSPDGQYLASGSVDGFVEVWDFDTCRLRKDLAYQAKDEFMMHDKAVLCSSXXXXXXXXXXXXXXXXXXXXKVSTGQCLRRFESAHTQGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFRGHTSYXXXXXXXXXXXXXXXXXXXXXXXXXXAKTTENLHTFHPALSIGSHTEASVHTVCPLPGSAEQVLVSNRTSTAFLCTLQGQVVRSFTSPKSVRADFTCACLSPKGRWVYCAGEDGELFCFDAATTEVEKTLKVSEKEIIGLAHHPHRNLLATFSNEGLLKLWK 1545
            MS E+ES DVIRLI Q+LKE+NL KTL+++Q E+ + LNT+D++D+ +SDIN G W+ V+  V +L LP  KL+ +YEQ+VLEL+E+REL  AR +LR  DP + MK++EP+RY+ LE+ L + +  DPR+ YP GSSKE+RRA IA+ L  EVSVVPPSRLLAL+ QALKWQQ QGLLP G   DLFRG A A K+  EEK P  ++ QIKFG KSH E A+FSPDGQYL +GSVDGF+EVW+F T ++RKDL YQA+D FM+ D AVL    XXXXXXXXXXXXXXXXXXX   TGQCLRRFE AH++GVT    XXXXXXXXXXXXXXXXXXXXXXXX   KEFRGHTS+     XXXXXXXXXXXXXXXXXXXXX  TTE   TF  +L   S  + +V++V  LP + +  +V NR++T  +  +QGQ+VRSF+S K    DF   C+SP+G W+YC GED  ++CF   T ++E+TL + EK++IG+AHHPH+NL+AT+S +GLLKLWK
Sbjct:    1 MSIEIESADVIRLIQQYLKESNLFKTLQSVQEETGISLNTVDSIDSFVSDINSGHWDIVLKAVQTLKLPDKKLIDLYEQVVLELIELRELGAARSLLRQTDPMVMMKQQEPERYVHLENLLAR-SYFDPREAYPDGSSKERRRAAIAHALSGEVSVVPPSRLLALLGQALKWQQHQGLLPPGTTIDLFRGKA-AMKEQEEEKYPTMLSRQIKFGQKSHVECAQFSPDGQYLVTGSVDGFIEVWNFTTAKIRKDLKYQAQDNFMIMDDAVLSMCFXXXXXXXXXXXXXXXXXXXXXQTGQCLRRFERAHSKGVTCTQFXXXXXXXXXXXXXXXXXXXXXXXXKTLKEFRGHTSFVNEAIXXXXXXXXXXXXXXXXXXXXXXXTTECTATFK-SLGGSSGIDITVNSVHVLPKNLDHFVVCNRSNTVVIMNMQGQIVRSFSSGKREAGDFVACCVSPRGEWIYCVGEDMVMYCFSTFTGKLERTLTIHEKDVIGIAHHPHQNLIATYSEDGLLKLWK 512
[Close]
BLAST of mRNA_Ecto-sp9_F_contig107.620.1 vs.
Match: WD40 (repeat-containing protein SMU1 n=3 Tax=Eleutherozoa TaxID=133551 RepID=A0A7M7NHY9_STRPU)

HSP 1 Score: 458 bits (1178), Expect = 6.040e-154
Identity = 270/516 (52.33%), Postives = 344/516 (66.67%), Query Frame = 1 
Query:    1 MSFEVESEDVIRLILQFLKENNLTKTLRALQAESSVCLNTIDNLDNLMSDINHGRWEAVMPQVSSLSLPLAKLVAVYEQLVLELLEMRELDVAREILRTADPFLQMKKEEPDRYLRLEHWLQKGAAIDPRDLYPAGSSKEKRRAEIANMLIPEVSVVPPSRLLALVNQALKWQQVQGLLPRGQKFDLFRGGARASKKDMEEKPPRKMAGQIKFGTKSHPEVARFSPDGQYLASGSVDGFVEVWDFDTCRLRKDLAYQAKDEFMMHDKAVLCSSXXXXXXXXXXXXXXXXXXXXKVSTGQCLRRFESAHTQGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFRGHTSYXXXXXXXXXXXXXXXXXXXXXXXXXXAKTTENLHTFHPALSIGSHTEASVHTVCPLPGSAEQVLVSNRTSTAFLCTLQGQVVRSFTSPKSVRADFTCACLSPKGRWVYCAGEDGELFCFDAATTEVEKTLKVSEKEIIGLAHHPHRNLLATFSNEGLLKLWKS 1548
            MS E+ES DV+RLI Q+LKE  L +TL  LQ ESSV LNT+D++D  ++DIN G W+ V+ Q+ SL LP   L+ +YEQ+VLEL+E+REL  AR +LR  DP + +K+ + DRY+ LE+ L + +  DPR+ YP GSSKE+RRA IA  L  EVSVVPPSRLLAL+ Q+LKWQQ QGLLP G   DLF+G A A + + EEK P +++  IKFG KSH E A FSPDGQ+L +GSVDGFVEVW+F T ++RKDL YQA+D FM+ D AVL   XXXXXXXXXXXXXXXXXXXX     QCLRRFE+AH++GVT                               KEFRGHTS+                           KTTE + TF  +L   S T+ +V++V P P +AEQ +V NR++T  +  +QGQ+VRSF+S K    DFTC+CLSP+G W+YC GED  L+CF  +T ++E+TL V EK++IG+  HPH NLLAT+S +GLLKLWKS
Sbjct:    1 MSLEIESADVVRLIQQYLKEAGLPRTLATLQEESSVSLNTVDSIDQFITDINSGHWDTVLQQIQSLKLPDKTLIDLYEQIVLELIELRELGAARSLLRQTDPMIMLKQNQADRYVHLENLLAR-SYFDPREAYPDGSSKERRRAAIAQALSGEVSVVPPSRLLALLGQSLKWQQHQGLLPPGVTIDLFKGKA-AVRDEEEEKYPTQLSKTIKFGQKSHVECAAFSPDGQFLVTGSVDGFVEVWNFQTGKIRKDLKYQAEDSFMLMDDAVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXQCLRRFENAHSKGVTSVKFSKDATQILSSSFDQSLRIHGLKSGKTLKEFRGHTSFVNEAVFAPDGHLALSASSDGTIKVWNIKTTECISTFK-SLGGSSATDITVNSVMPYPKNAEQFVVCNRSNTVVIMNMQGQIVRSFSSGKREGGDFTCSCLSPRGEWIYCVGEDLVLYCFSTSTGKLERTLTVHEKDVIGIVPHPHNNLLATYSEDGLLKLWKS 513
[Close]
BLAST of mRNA_Ecto-sp9_F_contig107.620.1 vs.
Match: WD40 (repeat-containing protein SMU1-like n=2 Tax=Alcyoniina TaxID=723662 RepID=UPI001F033ED8)

HSP 1 Score: 457 bits (1176), Expect = 1.210e-153
Identity = 319/516 (61.82%), Postives = 392/516 (75.97%), Query Frame = 1 
Query:    1 MSFEVESEDVIRLILQFLKENNLTKTLRALQAESSVCLNTIDNLDNLMSDINHGRWEAVMPQVSSLSLPLAKLVAVYEQLVLELLEMRELDVAREILRTADPFLQMKKEEPDRYLRLEHWLQKGAAIDPRDLYPAGSSKEKRRAEIANMLIPEVSVVPPSRLLALVNQALKWQQVQGLLPRGQKFDLFRGGARASKKDMEEKPPRKMAGQIKFGTKSHPEVARFSPDGQYLASGSVDGFVEVWDFDTCRLRKDLAYQAKDEFMMHDKAVLCSSXXXXXXXXXXXXXXXXXXXXKVSTGQCLRRFESAHTQGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFRGHTSYXXXXXXXXXXXXXXXXXXXXXXXXXXAKTTENLHTFHPALSIGS-HTEASVHTVCPLPGSAEQVLVSNRTSTAFLCTLQGQVVRSFTSPKSVRADFTCACLSPKGRWVYCAGEDGELFCFDAATTEVEKTLKVSEKEIIGLAHHPHRNLLATFSNEGLLKLWK 1545
            M+ EVES DV+RLI Q+LKENNL++TL  LQ ES + LNT+D+++  +++IN+G W+ V+  V  L LP   L+ +YEQ+VLEL+E+REL  AR +LR  DP + +K ++PDRYL LE+ L + +  DPR+ YP GSSKE+RRA IA  L  EVSVVPPSRLLAL+ QALKWQQ QGLLP G   D+FRG A A + + EEK P +++  IKFGTKSH E A FSPDGQYL SGSVDGF+EVW+F T ++RKDL YQA+D FMM D AVLC  XXXXXXXXXXXXXXXXXXXX     QCLRRFE AH +GVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KEFRGH S+     XXXXXXXXXXXXXXXXXXXXX      +HTF PA  +GS  T+ +V++V P+P + EQ +V NR++TA +  +QGQ+VRSFT+ K    DF C  LSP+G W+YC GED  L+CF   T ++E++L+V EK++IG+ HHPH NL+ATFS +G LKLWK
Sbjct:    1 MALEVESADVVRLIEQYLKENNLSRTLAVLQEESGITLNTVDSVEGFVTEINNGHWDTVLQAVQPLKLPDKTLIELYEQIVLELIELRELGAARSLLRQTDPMIMLKAQQPDRYLHLENLLAR-SYFDPREAYPEGSSKERRRAAIAQALSGEVSVVPPSRLLALLGQALKWQQYQGLLPPGTSIDVFRGKA-AVRDEEEEKYPTQLSRTIKFGTKSHAECALFSPDGQYLVSGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCXXXXXXXXXXXXXXXXXXXXXXXXXXXQCLRRFERAHAKGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKEFRGHISFVNDVVXXXXXXXXXXXXXXXXXXXXXXXXXXXIHTFKPA--VGSVATDIAVNSVHPIPKNMEQFVVCNRSNTAVIMNMQGQIVRSFTTGKREGGDFACCSLSPRGEWIYCVGEDMMLYCFSTDTGKLEQSLQVHEKDVIGVKHHPHNNLIATFSEDGQLKLWK 512
[Close]
BLAST of mRNA_Ecto-sp9_F_contig107.620.1 vs.
Match: WD40 (repeat-containing protein SMU1 n=2 Tax=Actiniaria TaxID=6103 RepID=A7S4D0_NEMVE)

HSP 1 Score: 454 bits (1167), Expect = 2.770e-152
Identity = 314/515 (60.97%), Postives = 395/515 (76.70%), Query Frame = 1 
Query:    1 MSFEVESEDVIRLILQFLKENNLTKTLRALQAESSVCLNTIDNLDNLMSDINHGRWEAVMPQVSSLSLPLAKLVAVYEQLVLELLEMRELDVAREILRTADPFLQMKKEEPDRYLRLEHWLQKGAAIDPRDLYPAGSSKEKRRAEIANMLIPEVSVVPPSRLLALVNQALKWQQVQGLLPRGQKFDLFRGGARASKKDMEEKPPRKMAGQIKFGTKSHPEVARFSPDGQYLASGSVDGFVEVWDFDTCRLRKDLAYQAKDEFMMHDKAVLCSSXXXXXXXXXXXXXXXXXXXXKVSTGQCLRRFESAHTQGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFRGHTSYXXXXXXXXXXXXXXXXXXXXXXXXXXAKTTENLHTFHPALSIGSHTEASVHTVCPLPGSAEQVLVSNRTSTAFLCTLQGQVVRSFTSPKSVRADFTCACLSPKGRWVYCAGEDGELFCFDAATTEVEKTLKVSEKEIIGLAHHPHRNLLATFSNEGLLKLWK 1545
            M+ EVES DV+RL+ QFLKENNL +TL  LQ E+ + LNT+D++++ +++IN G W+ V+  + SL LP  KL+ +YEQ+VLEL+E+REL  AR +LR  DP + +K+++ DRYL LE+ L K +  D R+ YP G SKE+RRA IA  L  EVSVVPPSRLLAL+ QALKWQQ QG+LP G   D+FRG A A + + EEK P +M+  IKFGTKSHPE A FSPDGQYL +GSVDGF+EVW+F T ++RKDL YQA++ FMM D+ VLC  XXXXXXXXXXXXXXXXXXXX     QCLRRFE AH++GVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KEFRGHTS+   XXXXXXXXXXXXXXXXXXXXXXX   TE  HTF P++  G  +E +V++V  LP + EQ +V N+++T  +  +QGQ+VRSFTS K    DF C  LSP+G W+YC GEDG ++CF   T ++E++L+V +K++IG+ HHPH+NL+A+ S +G LKLWK
Sbjct:    1 MALEVESADVVRLVQQFLKENNLPRTLATLQEETGITLNTVDSVESFVNEINSGHWDTVLTAIQSLKLPDKKLIDLYEQIVLELIELRELGAARSLLRQTDPMIMLKQQQADRYLHLENMLAK-SYFDTREAYPEGGSKERRRAAIAQALAGEVSVVPPSRLLALLGQALKWQQYQGMLPPGTTIDVFRGKA-AVRDEEEEKYPSQMSKTIKFGTKSHPECAAFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQENFMMMDETVLCXXXXXXXXXXXXXXXXXXXXXXXXXXXQCLRRFERAHSKGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKEFRGHTSFVNDXXXXXXXXXXXXXXXXXXXXXXXXXXTECQHTFKPSVG-GLSSEITVNSVHLLPRNIEQFVVCNKSNTVVIMNMQGQIVRSFTSGKRDGGDFLCCVLSPRGEWIYCVGEDGVMYCFSTTTGKLEQSLQVHDKDVIGVVHHPHQNLIASHSEDGQLKLWK 512
[Close]
BLAST of mRNA_Ecto-sp9_F_contig107.620.1 vs.
Match: WD40 (repeat-containing protein SMU1 n=5 Tax=Chelicerata TaxID=6843 RepID=A0A4Y2EGU2_ARAVE)

HSP 1 Score: 452 bits (1164), Expect = 7.860e-152
Identity = 316/515 (61.36%), Postives = 391/515 (75.92%), Query Frame = 1 
Query:    1 MSFEVESEDVIRLILQFLKENNLTKTLRALQAESSVCLNTIDNLDNLMSDINHGRWEAVMPQVSSLSLPLAKLVAVYEQLVLELLEMRELDVAREILRTADPFLQMKKEEPDRYLRLEHWLQKGAAIDPRDLYPAGSSKEKRRAEIANMLIPEVSVVPPSRLLALVNQALKWQQVQGLLPRGQKFDLFRGGARASKKDMEEKPPRKMAGQIKFGTKSHPEVARFSPDGQYLASGSVDGFVEVWDFDTCRLRKDLAYQAKDEFMMHDKAVLCSSXXXXXXXXXXXXXXXXXXXXKVSTGQCLRRFESAHTQGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFRGHTSYXXXXXXXXXXXXXXXXXXXXXXXXXXAKTTENLHTFHPALSIGSHTEASVHTVCPLPGSAEQVLVSNRTSTAFLCTLQGQVVRSFTSPKSVRADFTCACLSPKGRWVYCAGEDGELFCFDAATTEVEKTLKVSEKEIIGLAHHPHRNLLATFSNEGLLKLWK 1545
            MS E+ES DVIRLI Q+LKENNL +TL+ LQ E+S+ LNT+D++D+ + DIN+G W+ V+  V SL LP  KL+ +YEQ+VLEL+E+REL  AR +LR  DP +++K+E P+R++ LE+ L + +  DPR+ YP GSSKE+RRA IA  L  EVSVVPPSRLLAL+ QALKWQQ QGLLP G   DLFRG A A K+  EEK P +++ QIKFG K+H E ARFSPDGQYL +GSVDGF+EVW+F T ++RKDL YQA D FMM D AVLC   XXXXXXXXXXXXXXXXXXX     QCLRRFE AH +GVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFRGHTS+      XXXXXXXXXXXXXXXXXXXX      ++TF  +L   S  + +V++V  LP + E  +V NR++T  +  +QGQ+VRSF+S K    DF C  +SP+G W+YC GED  L+CF  +T ++E+TL V EK++IG+ HHPH+NL+ T+S +GLLKLWK
Sbjct:    1 MSIEIESADVIRLIQQYLKENNLFRTLQTLQDETSISLNTVDSVDSFIQDINNGHWDTVLKVVQSLKLPDKKLIDLYEQVVLELIELRELGAARSLLRQTDPMIKLKQEAPERHIHLENLLAR-SYFDPREAYPEGSSKERRRAAIAQSLAGEVSVVPPSRLLALLGQALKWQQHQGLLPPGTTIDLFRGKA-AIKEQEEEKYPTQLSKQIKFGQKAHVESARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQANDNFMMMDDAVLCLCFXXXXXXXXXXXXXXXXXXXXXXXXQCLRRFEKAHAKGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFRGHTSFVNEAIFXXXXXXXXXXXXXXXXXXXXXXXXXCVNTFK-SLGSSSGIDITVNSVHALPKNTEHFVVCNRSNTVSILNMQGQIVRSFSSGKREGGDFVCCTVSPRGEWIYCVGEDFVLYCFSTSTGKLERTLTVHEKDVIGIGHHPHQNLIGTYSEDGLLKLWK 512
[Close]
BLAST of mRNA_Ecto-sp9_F_contig107.620.1 vs.
Match: WD (repeat-containing protein 55 homolog n=39 Tax=Apocrita TaxID=7400 RepID=A0A7M7G2J5_NASVI)

HSP 1 Score: 450 bits (1158), Expect = 5.740e-151
Identity = 316/515 (61.36%), Postives = 396/515 (76.89%), Query Frame = 1 
Query:    1 MSFEVESEDVIRLILQFLKENNLTKTLRALQAESSVCLNTIDNLDNLMSDINHGRWEAVMPQVSSLSLPLAKLVAVYEQLVLELLEMRELDVAREILRTADPFLQMKKEEPDRYLRLEHWLQKGAAIDPRDLYPAGSSKEKRRAEIANMLIPEVSVVPPSRLLALVNQALKWQQVQGLLPRGQKFDLFRGGARASKKDMEEKPPRKMAGQIKFGTKSHPEVARFSPDGQYLASGSVDGFVEVWDFDTCRLRKDLAYQAKDEFMMHDKAVLCSSXXXXXXXXXXXXXXXXXXXXKVSTGQCLRRFESAHTQGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFRGHTSYXXXXXXXXXXXXXXXXXXXXXXXXXXAKTTENLHTFHPALSIGSHTEASVHTVCPLPGSAEQVLVSNRTSTAFLCTLQGQVVRSFTSPKSVRADFTCACLSPKGRWVYCAGEDGELFCFDAATTEVEKTLKVSEKEIIGLAHHPHRNLLATFSNEGLLKLWK 1545
            MS E+ES DVIRLI Q+LKE+NL KTL+ LQ E+ V LNT+D++D  ++DIN+G W+ V+  + SL LP  KL+ +YEQ+VLEL+E+REL  AR +LR  +P + MK++EP+RY+ LE+ L + +  DPR+ YP GS+KEKRRA IA  L  EVSVVP SRLLAL+ QALKWQQ QGLLP G   DLFRG A A +   +EK P +++ QIKFGTKSH E ARFSPDGQYL +GSVDGF+EVW+F T ++RKDL YQA+D FMM ++AVL  +XXXXXXXXXXXXXXXXXXXX   +GQCLRRFE AH++GVT  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFRGHTSY     XXXXXXXXXXXXXXXXXXXXX   TE   T+    S+G+  + +V++V  LP + E  +V NR++T  +  +QGQ+VRSF+S K    DF CA +SPKG ++YC GED  L+CF   + ++E+TL + EK++IGLAHHPH+NLL ++S +GL+KLWK
Sbjct:    1 MSIEIESADVIRLIQQYLKESNLVKTLQTLQEETGVSLNTVDSVDGFVADINNGHWDTVLKAIQSLKLPDKKLIDLYEQVVLELIELRELGAARSLLRQTEPMVMMKQQEPERYIHLENLLAR-SYFDPREAYPDGSTKEKRRAYIATSLSGEVSVVPSSRLLALLGQALKWQQHQGLLPPGTTIDLFRGKA-AVRDQEDEKYPTQLSKQIKFGTKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMEQAVLSMAXXXXXXXXXXXXXXXXXXXXXXQSGQCLRRFEKAHSKGVTCLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFRGHTSYVNEVIXXXXXXXXXXXXXXXXXXXXXXXXTECTGTYK---SLGA-ADLTVNSVHSLPKNPEHFVVCNRSNTVVIMNMQGQIVRSFSSGKREGGDFVCAVVSPKGEYIYCVGEDFVLYCFSTTSGKLERTLNIHEKDVIGLAHHPHQNLLCSYSEDGLVKLWK 509
[Close]
BLAST of mRNA_Ecto-sp9_F_contig107.620.1 vs.
Match: WD40 (repeat-containing protein SMU1 n=623 Tax=Vertebrata TaxID=7742 RepID=SMU1_HUMAN)

HSP 1 Score: 450 bits (1157), Expect = 8.970e-151
Identity = 317/516 (61.43%), Postives = 396/516 (76.74%), Query Frame = 1 
Query:    1 MSFEVESEDVIRLILQFLKENNLTKTLRALQAESSVCLNTIDNLDNLMSDINHGRWEAVMPQVSSLSLPLAKLVAVYEQLVLELLEMRELDVAREILRTADPFLQMKKEEPDRYLRLEHWLQKGAAIDPRDLYPAGSSKEKRRAEIANMLIPEVSVVPPSRLLALVNQALKWQQVQGLLPRGQKFDLFRGGARASKKDMEE-KPPRKMAGQIKFGTKSHPEVARFSPDGQYLASGSVDGFVEVWDFDTCRLRKDLAYQAKDEFMMHDKAVLCSSXXXXXXXXXXXXXXXXXXXXKVSTGQCLRRFESAHTQGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFRGHTSYXXXXXXXXXXXXXXXXXXXXXXXXXXAKTTENLHTFHPALSIGSHTEASVHTVCPLPGSAEQVLVSNRTSTAFLCTLQGQVVRSFTSPKSVRADFTCACLSPKGRWVYCAGEDGELFCFDAATTEVEKTLKVSEKEIIGLAHHPHRNLLATFSNEGLLKLWK 1545
            MS E+ES DVIRLI+Q+LKEN+L + L  LQ E++V LNT+D++++ ++DIN G W+ V+  + SL LP   L+ +YEQ+VLEL+E+REL  AR +LR  DP + +K+ +P+RY+ LE+ L + +  DPR+ YP GSSKEKRRA IA  L  EVSVVPPSRL+AL+ QALKWQQ QGLLP G   DLFRG  +A+ KD+EE K P +++  IKFG KSH E ARFSPDGQYL +GSVDGF+EVW+F T ++RKDL YQA+D FMM D AVL   XXXXXXXXXXXXXXXXXXXX    GQCLRRFE AH++GVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KEFRGH+S+    XXXXXXXXXXXXXXXXXXXXXX   TE  +TF  +L   + T+ +V++V  LP + E  +V NR++T  +  +QGQ+VRSF+S K    DF C  LSP+G W+YC GED  L+CF   T ++E+TL V EK++IG+AHHPH+NL+AT+S +GLLKLWK
Sbjct:    1 MSIEIESSDVIRLIMQYLKENSLHRALATLQEETTVSLNTVDSIESFVADINSGHWDTVLQAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENLLAR-SYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQALKWQQHQGLLPPGMTIDLFRG--KAAVKDVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLXXXXXXXXXXXXXXXXXXXXXXXXXXXGQCLRRFERAHSKGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKEFRGHSSFVNEAXXXXXXXXXXXXXXXXXXXXXXXXXTECSNTFK-SLGSTAGTDITVNSVILLPKNPEHFVVCNRSNTVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIATYSEDGLLKLWK 512
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig107.620.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
WD402.100e-30099.42repeat-containing protein SMU1 n=2 Tax=Ectocarpus ... [more]
WD401.080e-17563.55repeat-containing protein SMU1 n=1 Tax=Tribonema m... [more]
WD408.150e-15962.45repeat-containing protein SMU1 (Fragment) n=3 Tax=... [more]
WD404.270e-15460.58repeat-containing protein SMU1 n=1 Tax=Strigamia m... [more]
WD406.040e-15452.33repeat-containing protein SMU1 n=3 Tax=Eleutherozo... [more]
WD401.210e-15361.82repeat-containing protein SMU1-like n=2 Tax=Alcyon... [more]
WD402.770e-15260.97repeat-containing protein SMU1 n=2 Tax=Actiniaria ... [more]
WD407.860e-15261.36repeat-containing protein SMU1 n=5 Tax=Chelicerata... [more]
WD5.740e-15161.36repeat-containing protein 55 homolog n=39 Tax=Apoc... [more]
WD408.970e-15161.43repeat-containing protein SMU1 n=623 Tax=Vertebrat... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig107contigEcto-sp9_F_contig107:23850..35149 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score835.9
Seed ortholog evalue1e-239
Seed eggNOG ortholog2880.D7FX60
Preferred nameSMU1
KEGG koko:K13111
GOsGO:0000151,GO:0000375,GO:0000377,GO:0000381,GO:0000398,GO:0002119,GO:0002164,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005737,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0007154,GO:0007267,GO:0007268,GO:0007274,GO:0007275,GO:0007399,GO:0007517,GO:0007528,GO:0007610,GO:0007638,GO:0008150,GO:0008152,GO:0008380,GO:0009605,GO:0009612,GO:0009628,GO:0009653,GO:0009790,GO:0009791,GO:0009792,GO:0009887,GO:0009987,GO:0010467,GO:0010468,GO:0016043,GO:0016070,GO:0016071,GO:0016604,GO:0016607,GO:0019219,GO:0019222,GO:0022008,GO:0023052,GO:0030154,GO:0030182,GO:0031323,GO:0031461,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0034641,GO:0040011,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043484,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0046983,GO:0048024,GO:0048468,GO:0048513,GO:0048644,GO:0048666,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050684,GO:0050789,GO:0050794,GO:0050808,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0061061,GO:0065007,GO:0070013,GO:0071005,GO:0071011,GO:0071704,GO:0071840,GO:0072553,GO:0080008,GO:0080090,GO:0090304,GO:0098916,GO:0099172,GO:0099536,GO:0099537,GO:1901360,GO:1902494,GO:1903311,GO:1990234,GO:1990904
EggNOG free text desc.regulation of alternative mRNA splicing, via spliceosome
EggNOG OGsKOG0275@1,KOG0275@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03041
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionWD40 repeat
Ec32 orthologEc-10_004400.1
Exons12
Model size1551
Cds size1551
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig107.620.1prot_Ecto-sp9_F_contig107.620.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig107 23850..35149 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928288.9790635-CDS-Ecto-sp9_F_contig107:23849..239061622928288.9790635-CDS-Ecto-sp9_F_contig107:23849..23906Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig107 23850..23906 +
1692277822.74445-CDS-Ecto-sp9_F_contig107:23849..239061692277822.74445-CDS-Ecto-sp9_F_contig107:23849..23906Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig107 23850..23906 +
1622928288.9991639-CDS-Ecto-sp9_F_contig107:25062..251911622928288.9991639-CDS-Ecto-sp9_F_contig107:25062..25191Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig107 25063..25191 +
1692277822.766111-CDS-Ecto-sp9_F_contig107:25062..251911692277822.766111-CDS-Ecto-sp9_F_contig107:25062..25191Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig107 25063..25191 +
1622928289.013106-CDS-Ecto-sp9_F_contig107:25553..256481622928289.013106-CDS-Ecto-sp9_F_contig107:25553..25648Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig107 25554..25648 +
1692277822.7788606-CDS-Ecto-sp9_F_contig107:25553..256481692277822.7788606-CDS-Ecto-sp9_F_contig107:25553..25648Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig107 25554..25648 +
1622928289.0265605-CDS-Ecto-sp9_F_contig107:25933..261111622928289.0265605-CDS-Ecto-sp9_F_contig107:25933..26111Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig107 25934..26111 +
1692277822.7883794-CDS-Ecto-sp9_F_contig107:25933..261111692277822.7883794-CDS-Ecto-sp9_F_contig107:25933..26111Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig107 25934..26111 +
1622928289.0495086-CDS-Ecto-sp9_F_contig107:27159..273401622928289.0495086-CDS-Ecto-sp9_F_contig107:27159..27340Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig107 27160..27340 +
1692277822.7980943-CDS-Ecto-sp9_F_contig107:27159..273401692277822.7980943-CDS-Ecto-sp9_F_contig107:27159..27340Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig107 27160..27340 +
1622928289.0685227-CDS-Ecto-sp9_F_contig107:27919..280021622928289.0685227-CDS-Ecto-sp9_F_contig107:27919..28002Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig107 27920..28002 +
1692277822.8143303-CDS-Ecto-sp9_F_contig107:27919..280021692277822.8143303-CDS-Ecto-sp9_F_contig107:27919..28002Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig107 27920..28002 +
1622928289.08339-CDS-Ecto-sp9_F_contig107:28543..286781622928289.08339-CDS-Ecto-sp9_F_contig107:28543..28678Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig107 28544..28678 +
1692277822.8250992-CDS-Ecto-sp9_F_contig107:28543..286781692277822.8250992-CDS-Ecto-sp9_F_contig107:28543..28678Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig107 28544..28678 +
1622928289.096457-CDS-Ecto-sp9_F_contig107:29343..295291622928289.096457-CDS-Ecto-sp9_F_contig107:29343..29529Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig107 29344..29529 +
1692277822.8344688-CDS-Ecto-sp9_F_contig107:29343..295291692277822.8344688-CDS-Ecto-sp9_F_contig107:29343..29529Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig107 29344..29529 +
1622928289.1094322-CDS-Ecto-sp9_F_contig107:30585..306691622928289.1094322-CDS-Ecto-sp9_F_contig107:30585..30669Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig107 30586..30669 +
1692277822.8487034-CDS-Ecto-sp9_F_contig107:30585..306691692277822.8487034-CDS-Ecto-sp9_F_contig107:30585..30669Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig107 30586..30669 +
1622928289.1214738-CDS-Ecto-sp9_F_contig107:33438..336361622928289.1214738-CDS-Ecto-sp9_F_contig107:33438..33636Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig107 33439..33636 +
1692277822.8633926-CDS-Ecto-sp9_F_contig107:33438..336361692277822.8633926-CDS-Ecto-sp9_F_contig107:33438..33636Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig107 33439..33636 +
1622928289.1325054-CDS-Ecto-sp9_F_contig107:34602..347721622928289.1325054-CDS-Ecto-sp9_F_contig107:34602..34772Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig107 34603..34772 +
1692277822.8741508-CDS-Ecto-sp9_F_contig107:34602..347721692277822.8741508-CDS-Ecto-sp9_F_contig107:34602..34772Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig107 34603..34772 +
1622928289.161759-CDS-Ecto-sp9_F_contig107:35094..351491622928289.161759-CDS-Ecto-sp9_F_contig107:35094..35149Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig107 35095..35149 +
1692277822.88383-CDS-Ecto-sp9_F_contig107:35094..351491692277822.88383-CDS-Ecto-sp9_F_contig107:35094..35149Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig107 35095..35149 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig107.620.1

>prot_Ecto-sp9_F_contig107.620.1 ID=prot_Ecto-sp9_F_contig107.620.1|Name=mRNA_Ecto-sp9_F_contig107.620.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=517bp
MSFEVESEDVIRLILQFLKENNLTKTLRALQAESSVCLNTIDNLDNLMSD
INHGRWEAVMPQVSSLSLPLAKLVAVYEQLVLELLEMRELDVAREILRTA
DPFLQMKKEEPDRYLRLEHWLQKGAAIDPRDLYPAGSSKEKRRAEIANML
IPEVSVVPPSRLLALVNQALKWQQVQGLLPRGQKFDLFRGGARASKKDME
EKPPRKMAGQIKFGTKSHPEVARFSPDGQYLASGSVDGFVEVWDFDTCRL
RKDLAYQAKDEFMMHDKAVLCSSFSRDGEHLATGSTDGKMKVWKVSTGQC
LRRFESAHTQGVTSVAFARDGSQLLSSSMDQTARIHGLKSGKMLKEFRGH
TSYVNTAVYMHDGAKVVTGSADGTVKVWDAKTTENLHTFHPALSIGSHTE
ASVHTVCPLPGSAEQVLVSNRTSTAFLCTLQGQVVRSFTSPKSVRADFTC
ACLSPKGRWVYCAGEDGELFCFDAATTEVEKTLKVSEKEIIGLAHHPHRN
LLATFSNEGLLKLWKS*
back to top

mRNA from alignment at Ecto-sp9_F_contig107:23850..35149+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig107.620.1 ID=mRNA_Ecto-sp9_F_contig107.620.1|Name=mRNA_Ecto-sp9_F_contig107.620.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=11300bp|location=Sequence derived from alignment at Ecto-sp9_F_contig107:23850..35149+ (Ectocarpus species9 EcSCA_722f female)
ATGAGCTTCGAGGTGGAATCGGAGGATGTCATTCGACTCATCCTACAGTT
CCTGAAGGTATGTCTCTCTTTCCCAAAAATGGTAGCACAAGGCAGGGGTC
GTATTTTGTAGTGTGCTGCTGCCGCTGATGAGGATCCTGCCTGTGGGTGC
ACTGCTGCTGTACGCTGAACCCGAGCCAGTGATGGAAGGAGAGCCACGGG
AAGCCGGCTGCATTGCGGTGTGTTGCGTTGGTTTTGCAGAGAAGTGCAAG
ATTCGCAGAGTACGGGTCAAAGCGCGGTACACGCGGAACGGAATGCGATC
TTTGGGGGAGCTATCCTCTCAACCGCAGCAGCAGCATCACCTGCAACGTC
GCGATGTGGACGAGCCACCCTCCAACATCGGCGGAGACGCTGTTGCAGTA
GTTGGTGCTGCTGGAGTTGCTCGTGGGTGGTCAGCGCACGACGACGACGT
CATGTCCTTTTTGCTGACGTGGGACTTCCTTGTTCAAAGCAGTGACACTG
CTGTGTTGCACAGCCGATAGTCTACGCTACTCATCAAGCACCCCGTGTTC
CATCACTGCTGCCATGCCGATAGAGTGGTCACCCCCCACACTCAATGTGG
ACCTCATCATTGTACGTCTACTGCTGCTGTGAATGCGCTTCTTTACGAAA
TGCATGTAAGGATGCATATGCCCCAACAGCAGTCGTCACACAGCAGTCAC
ACACAACCGCCGTTACGCTGCAGATTTATATTATCTCACCGTGTACAAGA
CACAGGGTGCATACGTAGGGTGCTGAAGATACACCCCCTGGATCGATTTT
CATCATTTCCATTACACTGGAAGGAACAGTGATCGTGTCGGAATCGCGGC
GTTGGAACTGCTTTCTCGTCGAGAGCTTTCTCAAAATACATCATTTGATT
TCGACATCCTCCTCCTGAAACAGTACGGCAGTAGAGGTTTGAAATTGGGT
TCAGGGGGGGGTGGTATCTTATGAAACCTACGGTAGTGCAACTTCCCAAC
ACGTAAAACATGGACCCCCTTCGCGAGAATTATTTTTAATAATCTATGAA
GTAGAGAAAGGGGTTTCGTATCCGTATCCCTATCTCTAACCCCAGCCCAT
ACCCCGTACAAAGACCAAGCATACACTCGCGAAGGTTTCCGTAGGAAAGG
CAACGGTTCGTTGCGGAACGTCACCCCGCGGTTTCGCTCGCCCGCCCAAT
GCATTCATGCCAGGAGAACAACCTGACCAAGACGCTCAGGGCTCTCCAGG
CGGAGTCTAGCGTGTGTCTCAACACCATCGACAACCTGGACAACCTCATG
AGCGACATCAACCACGGGCGTTGGGAGGCGGTCATGCCTCAGGTACGGAA
CCCCACCTCCGTCACACAAACTTCGAAAATAGTATCTTCCCTGGGGGGAT
AGCTGTGTTACGCCCACCGGGCTTTTCTTGTTCATGGTGCACGCTGCTGT
TATATGCTGCGTTCTAAACGCGGCGTCACTTGTTGCTGTTATGCCGTTAG
ACCGACCTCTCTGTTGGATTAGGATCAAGACGAGTCTTAGACGGCTGGGC
CTTTGTCTTGCCGAGGCTCTCTGGTGGTGGTGGTGCTGCTGCTGCAGCTG
GTGATGTCGGTGTTACCGTACTGCTGGTGGTGATCGTGGTGGTGATGCTG
ATGTAACCGTACTTTGCCTCGTCTCGGCCTTTGCGTTTCTTGTTGGGGCG
GCAGGTGTCGTCGCTGTCTCTTCCCCTGGCCAAGCTCGTGGCGGTGTACG
AGCAGCTGGTGCTTGAGCTGCTTGAGATGAGGGAGCTGGACGTCGCCAGG
TAGGGAGGAAGAAACCCCCCCGACGTGGTACGATCCACCCTGTCGCGGTA
AGGCAACGGTGCGATGCGGTAGTACATGGTGCGATGCATCCTCTTGCGGT
ATTGCACGAAGTCTGCCCCCGCATAATCCCTTGCTGTTGCTGTTGCTAAC
CGCGGTGCCCATTGTCTCAGTATTACAATGGTGCAATGCATCCTTTTGGC
GGTATTGCACTAAACATGCTTCAAGGAACCCCACCCCTGGTGTCCCTGTT
GCCATGGGCTCGCTTTGCCATCTCCGGAGAACAGGGAGATCTTGCGCACG
GCCGACCCGTTCCTTCAGATGAAGAAGGAGGAGCCTGATAGGTATCTCCG
GCTAGAGCACTGGCTGCAGAAGGGCGCCGCTATCGACCCGCGAGACTTGT
ACCCGGCAGGGAGCTCGAAGGAAAAGCGCCGCGCGGAGATTGCCAACATG
CTCATCCCTGAGGTGGGCTGCCAGGGTTGGGGGGAGGCGGGGGTGGGTGG
GTGGGGAGAGCCGTACATGCCGTAGTCGTTAGACCATTGACCTCGCGTCC
CTACAAAGCAGGGAACGGGGGGGCACACTCATTGTTTTGCATGCCTCGCT
TGTAACGGTTAGACCATTCACCACGCGTCAGTCCTCGAGAGGACGGAGCG
TTGTTACCACAGGACCGATCGCCGATGGCCAATCGTTCCTTCCTACTTGA
CCGAAGGTGGGAGGCGGGTAACAGGGTGGATTTTTCGTGTCGGGTGCGGC
ATGAGTGTGGTTTTTTTCGGGCTCCGCTCGCTGCGTGCCTAGAATAACGG
GGTGTTGGCTCAAAAGTTGCGTGTTGTTGTCATCATCCATACTGTGAATC
TGTGAGTACAGGTTTAGGTTTACAGGGAAACACGCACCTGTATCTATTAC
AATAGCACTTGTTCACGAAGATAACACTTGGAAAGGGTACAATAAGTTCG
CGTGACGTTTCCGCCTCGTGGTTTCTTCTCGCTCGAGTCTCGCCTTCTCC
TGCGACGACGTCATATTGATGCGTTATTTTAGCCTTGTGAGGACCGCATA
AGTCGCCGCATCGTATGGCTTATTTTCTGGACGTGACCTTATCAGTGCTA
GCGTACGTCCCTGAACCAAATTATCGAGCATTCAATGTTCCATGTAATGC
TCCGCAGACGTACATACGCTCCCGTTTCCTCCTTTGCAAACGCAGCGATT
TCCCGCTGATACAGGCGTCTTTTCACTGATCAGCTGGTCAGAGTGGCCGA
GGATGCATCCATACCGAATCATGTGGTACGCGCGAGCGCGCTACCTCGCC
CGCTGAATCTTCTGTTCTCCTGCAAAGACTATGATAGTGCCTGCCGTTCT
GTTGGTCCGCGAGTATCCGCGGTCGATATTAGCTTCGTCTAAGCTTGCAC
CCTCCCACGCACCCCATCACGCACATAAAACAAGACTGACGTATTTTCAT
TGATCAGCTATATAGCACGGTCGATGCTGATAACCAAAACGCACACACAC
GCACACACAGGTGAGCGTTGTCCCGCCGAGTCGTCTCTTGGCGCTGGTGA
ACCAGGCCCTGAAGTGGCAGCAGGTGCAGGGCCTGCTGCCCAGGGGCCAG
AAGTTCGACCTCTTCAGGGGCGGCGCCCGCGCGAGCAAGAAGGATATGGA
GGAGAAGCCTCCCAGGAAGATGGCCGGTCAGATTAAGTTCGGTGAGAGAG
GGGGTGTACTCGTAGCCGTGCTGCCGTTGTCGGTATACCATTGACCTCGC
ACATCCCTGTGAAGCCGGGACTGAGCACGCCGGGTTTCTCACCGGACCAG
GCTCTCTTATCACCCAGCGCGAAGCGCCGTGAGCTATTCGACGAGTCGCA
TGGAGGGTGCGTGGAATGGTCTTGCCTCTCGTATGGTAGTTGAGTGTGTC
GTGCTTTCTCGGTTGTGCTGCTGGTGTACTGTTGTCATCTGTGGTTTACG
CTCACAGGCACGTCCTCAAGCCAGGCGTAAGATTTTGTTTGGTACAGACA
AATAATCTGCGGTTGGGTTCGTGTATGTGCGCGTTTGGCGTTGATCGGTA
TGGCATCTACAGCTATTCTCTGCTTGCGCAAATCGCCCGTCTGCTGTTTA
TATGTGGATATACTTGAAGCCTCTTCCAATCTACTTAATCCTCTAACTAG
GGTGCTTCGTTTGACGCATCGAGCTTGCACCTGCTTGGGTTGGCAGGTCT
CTCACAGTCCCTCGCTTGCACCACCCCGTTCGGCATCCCCACAAACGGCG
TATCGGCATCTATCACGCAGGCACGAAGAGTCACCCCGAGGTGGCTCGGT
TTAGCCCGGACGGGCAGTACCTGGCTTCCGGCAGCGTTGACGGCTTCGTG
GAGGTGATGTTGCCATCTCTTGTCCTCTTGTCCTCTTGTCCTCAAGAGAT
TGGATCCTGTTTGCCGTTCGTGGGTAGACCATGGCCTGTTTTATGGTCGA
TTTTGGCCAGACGTCCTGCCGTCCCCCGAGGCCGTCGTTTGTTTCCGCGA
CCAGGTATTTGCTTTTCCTCGATGGGGTGTGGGTCGATGTGACGGGCTGT
CACGACGGAATGTGTGAGGTGGGAAACGTGGATGCTTCCCGCGTGGGCGA
GCAGCGGGGGGTTGGCGTTGCCCCGGACGCAACTCGGGCATTTCTGTGCT
CCTGCTGAACCGGAACTTGAAAAAAGCGAAACGGGAGGACGCAAAGCGAA
ACAAACAAACCATTCAACAAACACCACACATGTAGTCCAAACAGCAACAG
CTTGAGAAGACAAGCCAAGACGACCAAAAACTGGCTCCACACACCAAGTT
AGGCGCTACAGAACGTCCACACCAAGAACACAACCCACAAAACTGAACCA
GAGTCAAGAAGAGAGAAATGCAACAACCCGACGGCCGACCACAGGTGTGG
GATTTCGACACGTGCAGGCTGCGCAAGGACCTGGCGTACCAGGCCAAGGA
CGAGTTCATGATGCACGACAAGGCGGTCCTGTGCAGTTCCTTCAGCAGGG
ACGGCGAGCACCTGGCCACCGGCAGCACCGTAAGCGCTGTTGTTTTTTGT
GCTGTCGAGACGGGGCGTCTTTGTTGTCGCGTCTGTTATGCTTGCCGGAG
AGGTCTCGGTACACGGGGCAGCCCTGATCTTCAGCCGTTTTTCAAGGGAT
TGACGTGCACACACAGTACCATGATTTTTGTTCCCCGTGACGATGGTATA
TTCGGCTGTGGCAAACCCTGATTTCGCTGCGCTGCCTTGCTCTTCTCGAT
TCCCCTGCACAGCTTCCCCCCGCCCACCCTCCCAGCTTCTGGTTCATCGT
TGTGGAATGTTGCCTGGGCCGGCGAAAATCCTGCATGTAGCTCCGTCCCG
ACATTGTAGGGATGCGACGGCAATGGCCTAAGGGATACGGCATGCGTTTA
CATGCGTACCCCCCCCTTCTCTTCGTTCTCTCGAGGACGCATGCACAATG
GCCTAACGTCTACGGCGTGCACAACTTGAGTACACGCCCCCCTCCCCTTG
ATGACGTGCGAACCTGGTTCGGTGAGAACCCGGCGTGCTCCGCCCCGGCT
TTGTAGGGATGCGAGGCAACTGGTCTAACGACTACGGCATGCACGGCTGA
AGGGATGCAAGGAAAATGGTCAAACGACTACGGCATGGACGGCTATGAGT
ACGCCCGCTCCTTCCTCGCCCGTCTTACTTTTTTTTGTCGTCAGGATGGC
AAGATGAAGGTCTGGAAGGTGTCCACCGGGCAGTGCCTGAGGCGCTTCGA
GAGCGCGCACACGCAAGGGGTCACCTCCGTGGCTTTCGCGAGGGACGGGT
CTCAGCTGCTCTCGTCCTCCATGGACCAGACGGCGCGAATCCACGGCCTC
AAGTCCGGCAAGATGCTCAAGGAATTCCGGGTAAGGATATTGTAGCATGC
TTGGAAGGAGGGAGGGGGGTATTACTCATGTTTTTGCAGGCCTTAGCGGT
TAGAACATTGACCACGCGTCCTCGAGAGGACGGAGCATTGTTCCCGCAGG
ACCGGTCACCGATGGGGGGGGCAGAAACCTTAGCCTGAGCTGCCCCTGTG
GGGCGGGTTGCGATTTTTGCCGCCGGTGGTCTCCACAACCAGTAGAGAGA
TCACCGTTCCTGTTCAGTTTTCATGTTTTTATTGGAGCTCGTCCTCGCAG
ATTTGTACCGTAGCAGGCTCCCTCTTCCGGAATGCATGTGAGGAGGCAAA
ATATTCACATGCCGTGAAAGTAGGACCGACCTCACAAGACATCACCAAAG
CGTCTCCCCTTCTCTCCGATGGTTTGATTGCCTACAAAAACTCAAGGCCG
TACACATCACATGTATCTGTGAGCTCACATCACGTGTATCTGTGAGCTTC
TCCGACGCTGGCCATGGCTCTCTGTGGGATTTGTGTGTGTTGCTGTGTAT
TCATTGAAAGGGCAAAAACCGTGTGAGCAAAGGGAGCAATACATCCGCCC
AGAAGCACGATCCCTTTTCCTTTGAGTGAAACGATTTTGTGCTCATCGTC
GAGGCAAGGTTTCTTCGAATGGACGACGTTCCTCTAAATAATTCCCACAA
GCTCTCACATCGGTTTTGGTATTCGAGTGCCTCATATGTTGGACATGCTT
AAGAAGTTACCTTGGATACGGGCTCCCTCCCTGATGGACTCGTCAGTGGG
AGACTCCCTGAAGTGAGGATTACGAGGGAGACTGATGAGTGAGACGCGAA
GTTGCCTCGCCAACGTTGTGGTGTCATTTCCGCAGGCGGCGTGATTTCCG
CGCATTCGACGGGTACAACGAGATTGTGTCGTGCTGTTTGCTCGCGTCGA
GGGGGTCCCGCCGAATGCAGCCTCCGAGGTGTACTTGGGTGCCATTCACG
GTCGGTGTCGCTCCCTCCTCCCTGCGCTGTAAATTCATTCCCTGCTGCTG
CTGCTACTGCTGCTGCTGCGATTGCTCTGTACCCAGGGTCATACGTCCTA
CGTGAACACCGCGGTGTACATGCACGACGGTGCTAAGGTGGTCACCGGGT
CAGCGGACGGCACGGTAAAGGTGAGTGTTAGGGTGTTTTCCTCTGTACAT
GTTCGAGTTCAGTATTTCTCCACGTCTCCGCGCTTTCGGCCTGGGGCGGA
TTTCGTCCGATGGACAGTTGTTAGATCTGTGTTGTGGTCGTCAGGACAAT
GCACCAGCATCAATCCCAACCGGTGAGTACATGGTGGTGTTTATCCACGA
ACGATGCCGCCCGTTCAACCATGATGCCGACGTCTCGACGGCCTCCACTT
CGTCGATCCGTAGAACTTTTTTCTTCCATACAAATCCCCACAGGCCTTGT
CTTACAGCCCTAAATATCATATTCCCGTGGCCTGGGCAATTACTGATCAA
CTTGGGCTGATTTTCACTCTCGCATTTCACGACCGCATCAACTGTCACAG
GGTACTGCTGTGTTGGCAATTGCCCTAGTTCATTCGCGTGCGAACCGAAT
TTTCAAATGTCTTCACAAAGAGTCAGACGGCAGGCGACCTAGAACCTAAA
AGGCTTTTTGTCCTGGTGTACGATGACCGCAACGAAACCCCAATCAAGTG
AGCGATATTCAGATTCAGTCATTTTCACTCGCACAAGGCTTAATCCCCGG
GAACCCTGTCCACAATGCCTGCCAGAACCCCCGCGCCGCTTTCACCATGA
AGCGCACGTCTCAGTCGCTACGATTGGCTCGTTTTGCAGCTTTTTTTCAT
ATTTTTTTCGACAGCACACATGCCGCTTCTGCAACCCAGAAAACGTTTTT
TCACTTTGGTGTTGACATGAATTTTCGATCGACAGCATCAGGCTCATTTT
CACTTGAATTTCACTATCCACTAAATCTAAATCTCTTGGTGCGTTAGCAA
TTCCCTCGCTGAGTCGCAAGAACCACAAATTCACCAAAGCCATCACAAAG
GATCAGACACCAGTTGCTAAGACGGCTTTCAGTTCTGCTGTCGTCATGGC
CACAACGACACCCCAATCGCACTAGATTTGTGAATTATTTTAACCCTGGT
TCACCCGCTCGAGACTCATTACCCGGGAACATAATGTCCCAATTGCCAGA
ACGACCGTCGCCCGTTGACCATGAAACCGGCGTCTGTATACAAAAATGTA
CATTTTTTTCACTCCGGCCTTCACACGAATCTTGTTTATTCGACAGTTTC
AGTCTCTCACTTTCATTATTGGATTTCAGTTTACGGCGAGGACTTTGTCA
CAAGTTGCTTTGTGAACAATAGCTCTTGTTCATTCACTCATAACGTTTCA
CTTTCATGGAGAGCCATCGCTAGGCGACTTAGAACTTGTGCGGTTTTCAG
TTTGCTGTCACCGTAGTCTCATGTGCATCAAATGCACGAGCCCATGTGAA
TAATTGTTACTCGGGTTTATTCGTCCGAAATTCATTTCCCATAATCCAAC
TTCGCCCGCACTCCCCCCGCGAGGGCTGCACTACCGTCAATTGGCATTGT
TTGTTGTGTTTCACTAGTGCCCACAGGCCAACAGATTACCCAAATGCATT
ATTTCTTCACTCCGGTCTTGAGACCACCATTTTCGTTTTAGATCGGCAAC
GTAGGCACACTTCCCGTATCGCTAGAACCTTGTAACAGGTTGATGTCTGA
ACAACCGACCCAGTTCGTCCGAGCAAATTGAATTCTCATGATCACGGCAA
GCCACGCTAGGCGGCGTAGAACTTGCATGGTTTTCAGTTCGTCTGTCACC
GGTCACCATGACCTCAATCATAAAATCACAATCCCATCAGAGGTGTGAAT
ATCTCTCGTTCGGGTTCACTTGCAAGACACTCAATACTCTTAAAACCAAA
CTTCACAATTCGAGAACGACGGCACCACTTTCGCCATAAATCGACATCTC
CTTGGCTACACTTGTCACCTTCGACACCGACGCACACCAACACCCACATG
ATTATATTTGCCTAACTTGGTTTGACCAAGTTCCGGATTGGTTGTTTGAT
TTTCATTAACGACCTACTGTGCTTCCAACGGAACATTTTTTTTCATTCCG
GCCTTTACTCACATCAACATTTTGTTTGGATGGTGGCAGTTGCGGGTTCA
TTTTCACTCGAATTTCACTACGCGGTAGAACCGTGACAGGCCCTTCATTC
GGATGAGAACCAAACTGTCACAAAAATTGTCACAAAGAGGTTGACACCAG
GCGACCTAGAGCCTTTTTTGCTTGCAATCCTGTTGCCACCATGGCCCAAA
CAACGCCTCAAGCACACCCAAGATAGGAGTCATTTTCACTCGATTTCAGT
CGCATCCAAGAGTCTCATTCCCCACGAACCTGGTAAGACAATCCTAGAAC
GTGGTAGCATCGGGAGCGCAGGCTCTCCGTACAGACCGCAAGTATCCACC
ATCGCTGTAATAAAAATGCAAGTCATTCCGATGACGTCCGTTTGCACAGA
AATCCAGGTGTTCTGCAGTGTTCGGTCGATCTCGAGTGACACTTTCACTT
GCGGGACGCCAGCCCAACAATTGTCTCCAACTTCTGGGTCATGCACGCCA
TGATCGCTTGTTTGCGTGGACTTCGTCCGCATGAGAGTCACGCCATGTTG
GCAATCTTCCGCCGCCACTGCTGTATCTACCGCGGCTGGCACCAGCCACG
TATTTCACTTCAAAGCTGAGGTCCTGCACTACAGTGTTCCATTCTGCCAC
TTGCTTTTCGTTCACGAAATCAACACCGATAACGCGGCATATTGTTTGCA
CGTGAACTACGTGGTACCGGACCTTTCGGGCATCCGCCGCCCTGTTGAAC
TCTCGATCGCCACTTGTTGTATTTTGTCGTTCTTGTCAGGTGTGGGATGC
GAAGACGACCGAGAATCTACACACGTTCCACCCCGCCCTGTCCATCGGCT
CCCACACGGAGGCGAGCGTGCATACGGTCTGCCCGCTGCCGGGCTCCGCC
GAGCAGGTGCTGGTGTCCAACCGAACGTCTACGGCCTTCCTTTGCACCCT
GCAGGGACAGGTGGTGCGGAGCTTCACGAGCCCGAAGGTGTGCGAGAGAA
CAGAGACAGAGACATAGAGACGGAGAGAGAGAGAGAGAGAGAGTATTCGC
GGATAAGGGGGCTGCATGACTTTTGAAGTCGGATTTTTGCCGCCCTACTG
GCGCACTTTGAGACGCTGAAGGTGCGTGCATCGCACGGTGCTTGTGCAGC
CCCGGGACAGAGCGGCAGGGCAGGAGGGGATCCGACGGCCGCGTAATGCG
TCTGTTTGGTATCCTGCGTTGTGGACGTCTATGTGAACGCCGTCCCTTCC
GGTGTTTGAATCCGTAGACGGGCGTAATGTACAGCGCATCCATCTGCTGT
TGCCATGGTGTGGAAGAGGTTGGGAATAGCTCCATGGAGCGTTGGCAGGA
GCGAGGGGGGGGGGGGGGGGTACACGGCAAGCAGGCTGATTACCTTTCGT
GGTTTCGGAGACGTGGGAAGAAGTGAACAGAGGCCACGGGTTCATTTCCG
TGTTGAGCCGGATAGAAGGTTCGAGTAGGGAGTGGATAACGAACAACAAG
CCTCAAGGTTGAACATCATTTTAGTACGGGAAGTGACGAGGACATAGATT
CAACATTTTTGAGATGCTGCTTTATCGTGTCTTGAGCTTTCCTTCGCACC
GCAGCAGTTGTGTTACCTGCACCGCACTACCTACCCGGACTTTCAAGATA
GGTTAGTACTTTCGAGTAGCACCAGTGTGAGTTCGGGCTTTGGAATACGC
AAAGGAGCTGGGAGTACTGCCGCGGATTTCGTCGCAGTGTTGCACGCCGG
CAGACGATTGAGAGTGAGGGGTTACCTCTGAGGAACATGTATTCGCTGGC
GTCTCGCGCTCAACTTGACGTCGACCCTTCTGCCCTCTTTCATTGAAACA
GAATATGACCCTACCCGTTGATGGAAACTCCTCCGTCCGGCTACCTCGAG
ACAGAACATGACCCCGCCACCCCCAATTTCTTGAACATTGTGCCGCGGAA
CAGTCTGTGCGCGCAGACTTCACGTGCGCGTGCCTGTCTCCTAAGGGACG
GTGGGTGTACTGCGCGGGGGAAGACGGGGAGTTGTTCTGCTTCGACGCGG
CCACGACCGAGGTTGAGAAGACGCTCAAGGTGTCGGAGAAGGAGATCATC
GGCCTGGCGCATCACCCCCACAGGTATACCATTGTCCAAGCACTGCGAAA
GGTGTCGTTCTCGATGCACGAGATTAAGTGCGCCCTTGGTTTGAAAGCGT
CAGTCATTGATTGAAAGTTTGCCGCCATGCTGCCCTCAGCGACAACACCC
GGGTGTGTGGTGTATAAAGAATTTGGTGACATCAACACAACGGTGCACAT
GTTCCGCTAGGTGGGAGGGGCGTTTCAGGGCGACGCAACATCGCGAAGAG
TGACCGCGCTGCACTTTCGACGGCGACTGCTCATCCTCCCCCCACCCGCC
ACCGCGGTCTATGTGCTGTCTGTTCGGTCATGTTCCTCCTGGCAGAAACT
TGCTGGCGACGTTCAGCAACGAAGGTCTGCTAAAGCTTTGGAAGTCATGA
back to top

Coding sequence (CDS) from alignment at Ecto-sp9_F_contig107:23850..35149+

>mRNA_Ecto-sp9_F_contig107.620.1 ID=mRNA_Ecto-sp9_F_contig107.620.1|Name=mRNA_Ecto-sp9_F_contig107.620.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=3102bp|location=Sequence derived from alignment at Ecto-sp9_F_contig107:23850..35149+ (Ectocarpus species9 EcSCA_722f female)
ATGAGCTTCGAGGTGGAATCGGAGGATGTCATTCGACTCATCCTACAGTT
CCTGAAGATGAGCTTCGAGGTGGAATCGGAGGATGTCATTCGACTCATCC
TACAGTTCCTGAAGGAGAACAACCTGACCAAGACGCTCAGGGCTCTCCAG
GCGGAGTCTAGCGTGTGTCTCAACACCATCGACAACCTGGACAACCTCAT
GAGCGACATCAACCACGGGCGTTGGGAGGCGGTCATGCCTCAGGAGAACA
ACCTGACCAAGACGCTCAGGGCTCTCCAGGCGGAGTCTAGCGTGTGTCTC
AACACCATCGACAACCTGGACAACCTCATGAGCGACATCAACCACGGGCG
TTGGGAGGCGGTCATGCCTCAGGTGTCGTCGCTGTCTCTTCCCCTGGCCA
AGCTCGTGGCGGTGTACGAGCAGCTGGTGCTTGAGCTGCTTGAGATGAGG
GAGCTGGACGTCGCCAGGTGTCGTCGCTGTCTCTTCCCCTGGCCAAGCTC
GTGGCGGTGTACGAGCAGCTGGTGCTTGAGCTGCTTGAGATGAGGGAGCT
GGACGTCGCCAGGGAGATCTTGCGCACGGCCGACCCGTTCCTTCAGATGA
AGAAGGAGGAGCCTGATAGGTATCTCCGGCTAGAGCACTGGCTGCAGAAG
GGCGCCGCTATCGACCCGCGAGACTTGTACCCGGCAGGGAGCTCGAAGGA
AAAGCGCCGCGCGGAGATTGCCAACATGCTCATCCCTGAGGGAGATCTTG
CGCACGGCCGACCCGTTCCTTCAGATGAAGAAGGAGGAGCCTGATAGGTA
TCTCCGGCTAGAGCACTGGCTGCAGAAGGGCGCCGCTATCGACCCGCGAG
ACTTGTACCCGGCAGGGAGCTCGAAGGAAAAGCGCCGCGCGGAGATTGCC
AACATGCTCATCCCTGAGGTGAGCGTTGTCCCGCCGAGTCGTCTCTTGGC
GCTGGTGAACCAGGCCCTGAAGTGGCAGCAGGTGCAGGGCCTGCTGCCCA
GGGGCCAGAAGTTCGACCTCTTCAGGGGCGGCGCCCGCGCGAGCAAGAAG
GATATGGAGGAGAAGCCTCCCAGGAAGATGGCCGGTCAGATTAAGTTCGG
TGAGCGTTGTCCCGCCGAGTCGTCTCTTGGCGCTGGTGAACCAGGCCCTG
AAGTGGCAGCAGGTGCAGGGCCTGCTGCCCAGGGGCCAGAAGTTCGACCT
CTTCAGGGGCGGCGCCCGCGCGAGCAAGAAGGATATGGAGGAGAAGCCTC
CCAGGAAGATGGCCGGTCAGATTAAGTTCGGCACGAAGAGTCACCCCGAG
GTGGCTCGGTTTAGCCCGGACGGGCAGTACCTGGCTTCCGGCAGCGTTGA
CGGCTTCGTGGAGGCACGAAGAGTCACCCCGAGGTGGCTCGGTTTAGCCC
GGACGGGCAGTACCTGGCTTCCGGCAGCGTTGACGGCTTCGTGGAGGTGT
GGGATTTCGACACGTGCAGGCTGCGCAAGGACCTGGCGTACCAGGCCAAG
GACGAGTTCATGATGCACGACAAGGCGGTCCTGTGCAGTTCCTTCAGCAG
GGACGGCGAGCACCTGGCCACCGGCAGCACCGTGTGGGATTTCGACACGT
GCAGGCTGCGCAAGGACCTGGCGTACCAGGCCAAGGACGAGTTCATGATG
CACGACAAGGCGGTCCTGTGCAGTTCCTTCAGCAGGGACGGCGAGCACCT
GGCCACCGGCAGCACCGATGGCAAGATGAAGGTCTGGAAGGTGTCCACCG
GGCAGTGCCTGAGGCGCTTCGAGAGCGCGCACACGCAAGGGGTCACCTCC
GTGGCTTTCGCGAGGGACGGGTCTCAGCTGCTCTCGTCCTCCATGGACCA
GACGGCGCGAATCCACGGCCTCAAGTCCGGCAAGATGCTCAAGGAATTCC
GGGATGGCAAGATGAAGGTCTGGAAGGTGTCCACCGGGCAGTGCCTGAGG
CGCTTCGAGAGCGCGCACACGCAAGGGGTCACCTCCGTGGCTTTCGCGAG
GGACGGGTCTCAGCTGCTCTCGTCCTCCATGGACCAGACGGCGCGAATCC
ACGGCCTCAAGTCCGGCAAGATGCTCAAGGAATTCCGGGGTCATACGTCC
TACGTGAACACCGCGGTGTACATGCACGACGGTGCTAAGGTGGTCACCGG
GTCAGCGGACGGCACGGTAAAGGGTCATACGTCCTACGTGAACACCGCGG
TGTACATGCACGACGGTGCTAAGGTGGTCACCGGGTCAGCGGACGGCACG
GTAAAGGTGTGGGATGCGAAGACGACCGAGAATCTACACACGTTCCACCC
CGCCCTGTCCATCGGCTCCCACACGGAGGCGAGCGTGCATACGGTCTGCC
CGCTGCCGGGCTCCGCCGAGCAGGTGCTGGTGTCCAACCGAACGTCTACG
GCCTTCCTTTGCACCCTGCAGGGACAGGTGGTGCGGAGCTTCACGAGCCC
GAAGGTGTGGGATGCGAAGACGACCGAGAATCTACACACGTTCCACCCCG
CCCTGTCCATCGGCTCCCACACGGAGGCGAGCGTGCATACGGTCTGCCCG
CTGCCGGGCTCCGCCGAGCAGGTGCTGGTGTCCAACCGAACGTCTACGGC
CTTCCTTTGCACCCTGCAGGGACAGGTGGTGCGGAGCTTCACGAGCCCGA
AGTCTGTGCGCGCAGACTTCACGTGCGCGTGCCTGTCTCCTAAGGGACGG
TGGGTGTACTGCGCGGGGGAAGACGGGGAGTTGTTCTGCTTCGACGCGGC
CACGACCGAGGTTGAGAAGACGCTCAAGGTGTCGGAGAAGGAGATCATCG
GCCTGGCGCATCACCCCCACAGTCTGTGCGCGCAGACTTCACGTGCGCGT
GCCTGTCTCCTAAGGGACGGTGGGTGTACTGCGCGGGGGAAGACGGGGAG
TTGTTCTGCTTCGACGCGGCCACGACCGAGGTTGAGAAGACGCTCAAGGT
GTCGGAGAAGGAGATCATCGGCCTGGCGCATCACCCCCACAGAAACTTGC
TGGCGACGTTCAGCAACGAAGGTCTGCTAAAGCTTTGGAAGTCATGAAAA
CTTGCTGGCGACGTTCAGCAACGAAGGTCTGCTAAAGCTTTGGAAGTCAT
GA
back to top