mRNA_Ecto-sp9_F_contig10465.440.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp9_F_contig10465.440.1
Unique Name	mRNA_Ecto-sp9_F_contig10465.440.1
Type	mRNA
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)

Homology

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BLAST of mRNA_Ecto-sp9_F_contig10465.440.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2C0_ECTSI)

HSP 1 Score: 267 bits (683), Expect = 7.220e-87
Identity = 161/167 (96.41%), Postives = 162/167 (97.01%), Query Frame = 1

Query:   13 QESILTSSGDSTCIIWDVEMGVTTAHFTDHGGDVMSVSILPSVDKNVFVSGSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFPDGKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHEVRAT 513
            QESILTSSGDSTCIIWDVEMGVTTAHFTDHGGDVMSVSILPSVDKNVFVS   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFPDGKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHE R +
Sbjct:  159 QESILTSSGDSTCIIWDVEMGVTTAHFTDHGGDVMSVSILPSVDKNVFVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFPDGKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHENRVS 325

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BLAST of mRNA_Ecto-sp9_F_contig10465.440.1 vs.
Match: WD40-repeat-containing (domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC21_9STRA)

HSP 1 Score: 230 bits (586), Expect = 3.580e-72
Identity = 141/167 (84.43%), Postives = 147/167 (88.02%), Query Frame = 1

Query:   13 QESILTSSGDSTCIIWDVEMGVTTAHFTDHGGDVMSVSILPSVDKNVFVSGSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFPDGKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHEVRAT 513
            Q+SILTSSGDSTCI WDVEMGV   HFTDH GDVMSVSILP V          XXXXXXXXXXXXXXXXXXXXXXXXXXXX FFPDGK+FGTGSDDSSCRLFDMRCYGE NYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVT++TG+PAYQLAGHE R +
Sbjct:  161 QDSILTSSGDSTCIFWDVEMGVAKQHFTDHMGDVMSVSILPHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMFFPDGKSFGTGSDDSSCRLFDMRCYGEVNYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTSNTGMPAYQLAGHENRVS 327

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BLAST of mRNA_Ecto-sp9_F_contig10465.440.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1KDD3_HETAK)

HSP 1 Score: 196 bits (497), Expect = 8.220e-59
Identity = 123/169 (72.78%), Postives = 138/169 (81.66%), Query Frame = 1

Query:    7 LAQESILTSSGDSTCIIWDVEMGVTTAHFTDHGGDVMSVSILPSVDKNVFVSGSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFPDGKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHEVRAT 513
            L + SI+TSSGDSTCIIWDV  G    HFTDH GDVMSV++    +KN+FVSGSCXXXXXXXXXXXXXXXXXXXXXXXXXXX   FPDG AFGTGSDDSSCR+FDMRCYGE N FGND+ILCGITSV+FS+SGRLLFAGYDDYN YVWD   +     ++L GH+ R +
Sbjct:  156 LDEASIITSSGDSTCIIWDVNRGEAREHFTDHQGDVMSVAVSDQ-NKNIFVSGSCXXXXXXXXXXXXXXXXXXXXXXXXXXXVTMFPDGFAFGTGSDDSSCRMFDMRCYGEVNQFGNDRILCGITSVSFSKSGRLLFAGYDDYNSYVWDTLKNDPSETFKLQGHDNRVS 323

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BLAST of mRNA_Ecto-sp9_F_contig10465.440.1 vs.
Match: Uncharacterized (protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A3R6Z757_9STRA)

HSP 1 Score: 190 bits (483), Expect = 1.390e-56
Identity = 122/169 (72.19%), Postives = 137/169 (81.07%), Query Frame = 1

Query:    7 LAQESILTSSGDSTCIIWDVEMGVTTAHFTDHGGDVMSVSILPSVDKNVFVSGSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFPDGKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHEVRAT 513
            L + +I+TSSGDSTCI+WDVE G     F DH GDVMSVSI P   +N+F+SG  XXXXXXXXXXXXXXXXXXXXXXXXXXXX FFPDG A GTGSDDSSCRLFD+R YGE N F NDKILCGITSV++S+SGR +FAGYDDYNCY WDV ++TG   YQL GHE R +
Sbjct:  167 LDEANIITSSGDSTCILWDVESGEVKTTFKDHTGDVMSVSINPH-HQNMFISGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFFPDGNALGTGSDDSSCRLFDLRAYGELNNFSNDKILCGITSVSYSKSGRFMFAGYDDYNCYCWDVLSNTGAHVYQLTGHENRVS 334

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BLAST of mRNA_Ecto-sp9_F_contig10465.440.1 vs.
Match: Uncharacterized (protein n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A397FXD3_9STRA)

HSP 1 Score: 190 bits (483), Expect = 1.030e-53
Identity = 122/169 (72.19%), Postives = 137/169 (81.07%), Query Frame = 1

Query:    7 LAQESILTSSGDSTCIIWDVEMGVTTAHFTDHGGDVMSVSILPSVDKNVFVSGSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFPDGKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHEVRAT 513
            L + +I+TSSGDSTCI+WDVE G     F DH GDVMSVSI P   +N+F+SG  XXXXXXXXXXXXXXXXXXXXXXXXXXXX FFPDG A GTGSDDSSCRLFD+R YGE N F NDKILCGITSV++S+SGR +FAGYDDYNCY WDV ++TG   YQL GHE R +
Sbjct:  522 LDEANIITSSGDSTCILWDVESGEVKTTFKDHTGDVMSVSINPH-HQNMFISGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFFPDGNALGTGSDDSSCRLFDLRAYGELNNFSNDKILCGITSVSYSKSGRFMFAGYDDYNCYCWDVLSNTGAHVYQLTGHENRVS 689

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BLAST of mRNA_Ecto-sp9_F_contig10465.440.1 vs.
Match: Hypothetical (protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HG74_9STRA)

HSP 1 Score: 180 bits (456), Expect = 1.370e-52
Identity = 119/170 (70.00%), Postives = 134/170 (78.82%), Query Frame = 1

Query:    7 LAQESILTSSGDSTCIIWDVEMGVTTAHFTDHGGDVMSVSILPSVDKNVFVSGSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFPDGKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQL-AGHEVRAT 513
            L +  ILTSSGDSTCI WD+  G     F+DH GDVMS+++ PS D N+FVSG  XXXXXXXXXXXXXXXXXXXXXXXXX    +FPDGKAFGTGSDDS+CRLFDMRCYGE N FGND+ILCGITSV FS+SGRLLFAGYDDYN  VWDV ++    A+QL   HE R +
Sbjct:  161 LDEGRILTSSGDSTCIHWDINSGEVLKTFSDHKGDVMSLAVNPS-DSNIFVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXNSVEWFPDGKAFGTGSDDSTCRLFDMRCYGEVNRFGNDRILCGITSVGFSKSGRLLFAGYDDYNTIVWDVLSTGKQQAFQLHQPHENRVS 329

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BLAST of mRNA_Ecto-sp9_F_contig10465.440.1 vs.
Match: Hypothetical (protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K4C7_9STRA)

HSP 1 Score: 177 bits (450), Expect = 1.770e-51
Identity = 117/161 (72.67%), Postives = 131/161 (81.37%), Query Frame = 1

Query:    7 LAQESILTSSGDSTCIIWDVEMGVTTAHFTDHGGDVMSVSILPSVDKNVFVSGSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFPDGKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQL 489
            L +  ILT+SGDSTCI WD+E G     F+DH GDVMS+S  P+ +KN+FVSG  XXXXXXXXXXXXXXXXXXXXXXXXXXX  FFPDG AFGTGSDDS+CRLFDMRCYGE N F ++KILCGITSVAFSRSGRLLFAGYDD+NCY WD   +    A+QL
Sbjct:  161 LDESQILTASGDSTCIHWDIESGEVLNTFSDHKGDVMSLSTCPT-NKNLFVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAFFPDGNAFGTGSDDSTCRLFDMRCYGEVNKFAHEKILCGITSVAFSRSGRLLFAGYDDFNCYGWDTLGNGKNYAFQL 320

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BLAST of mRNA_Ecto-sp9_F_contig10465.440.1 vs.
Match: Guanine (nucleotide-binding protein subunit beta-1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G6F1_9STRA)

HSP 1 Score: 174 bits (440), Expect = 2.990e-50
Identity = 89/173 (51.45%), Postives = 109/173 (63.01%), Query Frame = 1

Query:    7 LAQESILTSSGDSTCIIWDVEMGVTTAHFTDHGGDVMSVSILPSVDKNVFVSGSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFPDGKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTN-STGIPAYQL---AGHEVRAT 513
            +  ++ILTSSGDSTCI WD+E G   + FTDH GDVMSV++ P+ D+N+FVSGSC                             FFP+G  FGTGSDDSSCR+FD+RCY E N F +D+ILCGITSVAFS+SGRLL AGYDDY  +VWD    +   PA+      GHE R +
Sbjct:  153 IGSQNILTSSGDSTCIYWDIERGEPLSSFTDHNGDVMSVAVHPT-DRNLFVSGSCDATSKLFDIRQQGCVATFVGHESDINAVNFFPNGMCFGTGSDDSSCRMFDLRCYQEVNTFMSDRILCGITSVAFSQSGRLLLAGYDDYMTHVWDALKPNASSPAFSTDKNQGHENRVS 324

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BLAST of mRNA_Ecto-sp9_F_contig10465.440.1 vs.
Match: WD40 (repeat domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SP31_9ARCH)

HSP 1 Score: 164 bits (414), Expect = 2.090e-48
Identity = 101/154 (65.58%), Postives = 118/154 (76.62%), Query Frame = 1

Query:   52 IIWDVEMGVTTAHFTDHGGDVMSVSILPSVDKNVFVSGSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFPDGKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQLAGHEVRAT 513
            ++WD+E+G +   F DH  DVMS+SILP+VD+N+FVSGSC      XXXXXXXXXXXXXXXXXXXXXX  FPDGK  GTGSDD++CR FD+R  GE + F +D I+CGITSV FSRSGR+LFAGYDDYNC  WDV  ST    YQL GHE R +
Sbjct:    1 MLWDIELGQSKQTFADHEADVMSLSILPTVDQNLFVSGSCDRTAKVXXXXXXXXXXXXXXXXXXXXXXRLFPDGKGIGTGSDDTTCRFFDIRSCGEVSQFRSDNIVCGITSVTFSRSGRILFAGYDDYNCLGWDVLGSTDKHHYQLQGHENRVS 154

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BLAST of mRNA_Ecto-sp9_F_contig10465.440.1 vs.
Match: Hypothetical (protein n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z4N3_9STRA)

HSP 1 Score: 168 bits (426), Expect = 4.090e-48
Identity = 114/161 (70.81%), Postives = 130/161 (80.75%), Query Frame = 1

Query:    7 LAQESILTSSGDSTCIIWDVEMGVTTAHFTDHGGDVMSVSILPSVDKNVFVSGSCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFFPDGKAFGTGSDDSSCRLFDMRCYGEANYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVWDVTNSTGIPAYQL 489
            L +  ILTSSGDSTCI WD+E G     F+DH GDVMS++I P+ + ++FV    XXXXXXXXXXXXXXXXXXXXXXXXXXXX FFP G AFGTGSDDS+CRLFDMRCYGE N F ++KILCGITSVAFSRSGRLLFAGYDD+NCY WD  ++    A+QL
Sbjct:  160 LDEGQILTSSGDSTCIHWDIESGEVLKTFSDHKGDVMSLAISPT-NNSLFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFFPGGHAFGTGSDDSTCRLFDMRCYGEVNKFAHEKILCGITSVAFSRSGRLLFAGYDDFNCYSWDTLSNGKNHAFQL 319

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig10465.440.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig10465.440.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
Uncharacterized	7.220e-87	96.41	protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2C0...	[more]
WD40-repeat-containing	3.580e-72	84.43	domain protein n=1 Tax=Tribonema minus TaxID=30337...	[more]
Hypothetical	8.220e-59	72.78	protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re...	[more]
Uncharacterized	1.390e-56	72.19	protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A...	[more]
Uncharacterized	1.030e-53	72.19	protein n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A...	[more]
Hypothetical	1.370e-52	70.00	protein n=1 Tax=Helicotheca tamesis TaxID=374047 R...	[more]
Hypothetical	1.770e-51	72.67	protein n=2 Tax=Odontella aurita TaxID=265563 RepI...	[more]
Guanine	2.990e-50	51.45	nucleotide-binding protein subunit beta-1 n=1 Tax=...	[more]
WD40	2.090e-48	65.58	repeat domain-containing protein n=1 Tax=archaeon ...	[more]
Hypothetical	4.090e-48	70.81	protein n=2 Tax=Pseudictyota dubia TaxID=2749911 R...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig10465	contig	Ecto-sp9_F_contig10465:277..3884 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	271.2
Seed ortholog evalue	3.4e-70
Seed eggNOG ortholog	2880.D7G2C0
Preferred name	GNB1
KEGG ko	ko:K04536,ko:K04537,ko:K04538,ko:K07825
KEGG Pathway	ko04011,ko04014,ko04062,ko04151,ko04371,ko04713,ko04723,ko04724,ko04725,ko04726,ko04727,ko04728,ko04740,ko04742,ko04744,ko04926,ko05032,ko05034,ko05167,ko05200,map04011,map04014,map04062,map04151,map04371,map04713,map04723,map04724,map04725,map04726,map04727,map04728,map04740,map04742,map04744,map04926,map05032,map05034,map05167,map05200
GOs	GO:0000132,GO:0000187,GO:0000226,GO:0000278,GO:0000749,GO:0000750,GO:0001101,GO:0001403,GO:0001654,GO:0001666,GO:0001667,GO:0001750,GO:0001775,GO:0001917,GO:0001932,GO:0001934,GO:0002009,GO:0002682,GO:0002684,GO:0002685,GO:0002687,GO:0003007,GO:0003008,GO:0003013,GO:0003365,GO:0003371,GO:0003379,GO:0003380,GO:0003674,GO:0003824,GO:0003924,GO:0005246,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005834,GO:0005886,GO:0005929,GO:0005937,GO:0006109,GO:0006457,GO:0006873,GO:0006874,GO:0006875,GO:0006884,GO:0006915,GO:0006928,GO:0006935,GO:0006950,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007154,GO:0007155,GO:0007163,GO:0007165,GO:0007166,GO:0007186,GO:0007187,GO:0007188,GO:0007189,GO:0007191,GO:0007200,GO:0007204,GO:0007212,GO:0007213,GO:0007223,GO:0007264,GO:0007265,GO:0007267,GO:0007275,GO:0007369,GO:0007398,GO:0007399,GO:0007405,GO:0007423,GO:0007498,GO:0007507,GO:0007584,GO:0007596,GO:0007599,GO:0007600,GO:0007602,GO:0007603,GO:0007606,GO:0008015,GO:0008081,GO:0008092,GO:0008104,GO:0008150,GO:0008217,GO:0008219,GO:0008283,GO:0008356,GO:0008361,GO:0009267,GO:0009314,GO:0009416,GO:0009581,GO:0009582,GO:0009583,GO:0009584,GO:0009605,GO:0009606,GO:0009611,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009887,GO:0009888,GO:0009893,GO:0009898,GO:0009966,GO:0009967,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010468,GO:0010470,GO:0010525,GO:0010528,GO:0010562,GO:0010604,GO:0010646,GO:0010647,GO:0010657,GO:0010658,GO:0010659,GO:0010675,GO:0010817,GO:0010906,GO:0012501,GO:0014070,GO:0016020,GO:0016043,GO:0016055,GO:0016056,GO:0016247,GO:0016462,GO:0016477,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0017111,GO:0017145,GO:0019216,GO:0019218,GO:0019220,GO:0019222,GO:0019236,GO:0019725,GO:0019897,GO:0019898,GO:0019899,GO:0019932,GO:0019933,GO:0019935,GO:0022008,GO:0022402,GO:0022603,GO:0022607,GO:0022610,GO:0023051,GO:0023052,GO:0023056,GO:0030003,GO:0030010,GO:0030029,GO:0030036,GO:0030154,GO:0030168,GO:0030334,GO:0030335,GO:0030425,GO:0030447,GO:0030507,GO:0030587,GO:0030865,GO:0030866,GO:0030952,GO:0031090,GO:0031136,GO:0031137,GO:0031139,GO:0031152,GO:0031234,GO:0031253,GO:0031323,GO:0031325,GO:0031399,GO:0031401,GO:0031667,GO:0031668,GO:0031669,GO:0031682,GO:0031982,GO:0032005,GO:0032147,GO:0032268,GO:0032270,GO:0032350,GO:0032501,GO:0032502,GO:0032535,GO:0032870,GO:0032879,GO:0032956,GO:0032970,GO:0032991,GO:0033036,GO:0033043,GO:0033273,GO:0033554,GO:0033674,GO:0033993,GO:0034694,GO:0034695,GO:0035556,GO:0035567,GO:0035690,GO:0036267,GO:0036293,GO:0036294,GO:0036445,GO:0036477,GO:0040001,GO:0040007,GO:0040011,GO:0040012,GO:0040013,GO:0040017,GO:0042060,GO:0042074,GO:0042221,GO:0042325,GO:0042327,GO:0042330,GO:0042493,GO:0042578,GO:0042592,GO:0042594,GO:0042622,GO:0042995,GO:0043005,GO:0043010,GO:0043085,GO:0043087,GO:0043209,GO:0043226,GO:0043227,GO:0043326,GO:0043327,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043519,GO:0043547,GO:0043549,GO:0043577,GO:0043900,GO:0043902,GO:0043933,GO:0044085,GO:0044093,GO:0044182,GO:0044297,GO:0044422,GO:0044424,GO:0044425,GO:0044441,GO:0044444,GO:0044459,GO:0044463,GO:0044464,GO:0044764,GO:0044877,GO:0045165,GO:0045176,GO:0045595,GO:0045598,GO:0045859,GO:0045860,GO:0045937,GO:0045995,GO:0046578,GO:0046662,GO:0046999,GO:0047391,GO:0048103,GO:0048383,GO:0048471,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048584,GO:0048598,GO:0048699,GO:0048729,GO:0048731,GO:0048856,GO:0048869,GO:0048870,GO:0048878,GO:0048880,GO:0048881,GO:0048882,GO:0048883,GO:0048915,GO:0048916,GO:0048920,GO:0048925,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050795,GO:0050801,GO:0050817,GO:0050877,GO:0050878,GO:0050896,GO:0050909,GO:0051020,GO:0051056,GO:0051128,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051239,GO:0051246,GO:0051247,GO:0051259,GO:0051270,GO:0051272,GO:0051291,GO:0051293,GO:0051294,GO:0051301,GO:0051336,GO:0051338,GO:0051345,GO:0051347,GO:0051480,GO:0051493,GO:0051593,GO:0051606,GO:0051640,GO:0051641,GO:0051649,GO:0051653,GO:0051656,GO:0051674,GO:0051703,GO:0051704,GO:0051716,GO:0055057,GO:0055059,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0060026,GO:0060027,GO:0060041,GO:0060170,GO:0060255,GO:0060359,GO:0060429,GO:0061343,GO:0061351,GO:0062012,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070206,GO:0070208,GO:0070482,GO:0070542,GO:0070783,GO:0070887,GO:0071214,GO:0071229,GO:0071242,GO:0071310,GO:0071379,GO:0071380,GO:0071396,GO:0071398,GO:0071407,GO:0071417,GO:0071444,GO:0071453,GO:0071456,GO:0071478,GO:0071482,GO:0071495,GO:0071496,GO:0071840,GO:0071867,GO:0071868,GO:0071869,GO:0071870,GO:0071900,GO:0071902,GO:0071944,GO:0072089,GO:0072359,GO:0072503,GO:0072507,GO:0080090,GO:0090066,GO:0090181,GO:0090207,GO:0090702,GO:0095500,GO:0097305,GO:0097306,GO:0097381,GO:0097447,GO:0097458,GO:0097730,GO:0097731,GO:0097733,GO:0098552,GO:0098562,GO:0098588,GO:0098590,GO:0098630,GO:0098722,GO:0098743,GO:0098771,GO:0098772,GO:0098796,GO:0098797,GO:0099106,GO:0099120,GO:0104004,GO:0120025,GO:0120038,GO:0198738,GO:1901654,GO:1901655,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902494,GO:1902531,GO:1902533,GO:1902610,GO:1902622,GO:1902624,GO:1902850,GO:1903047,GO:1903664,GO:1903665,GO:1903725,GO:1903831,GO:1905114,GO:1905144,GO:1905145,GO:1905360,GO:2000026,GO:2000145,GO:2000147,GO:2000241,GO:2000243
EggNOG free text desc.	G-protein gamma-subunit binding
EggNOG OGs	KOG0286@1,KOG0286@2759
COG Functional cat.	S
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko04031,ko04147
Hectar predicted targeting category	other localisation
Exons	5
Model size	522
Cds size	522
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig10465.440.1	prot_Ecto-sp9_F_contig10465.440.1	Ectocarpus species9 EcSCA_722f female	polypeptide	Ecto-sp9_F_contig10465 277..3884 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622928256.7418263-CDS-Ecto-sp9_F_contig10465:276..435	1622928256.7418263-CDS-Ecto-sp9_F_contig10465:276..435	Ectocarpus species9 EcSCA_722f female	CDS	Ecto-sp9_F_contig10465 277..435 -
1692277811.4358206-CDS-Ecto-sp9_F_contig10465:276..435	1692277811.4358206-CDS-Ecto-sp9_F_contig10465:276..435	Ectocarpus species9 EcSCA_722f female	CDS	Ecto-sp9_F_contig10465 277..435 -
1622928256.755523-CDS-Ecto-sp9_F_contig10465:1068..1155	1622928256.755523-CDS-Ecto-sp9_F_contig10465:1068..1155	Ectocarpus species9 EcSCA_722f female	CDS	Ecto-sp9_F_contig10465 1069..1155 -
1692277811.4492893-CDS-Ecto-sp9_F_contig10465:1068..1155	1692277811.4492893-CDS-Ecto-sp9_F_contig10465:1068..1155	Ectocarpus species9 EcSCA_722f female	CDS	Ecto-sp9_F_contig10465 1069..1155 -
1622928256.76965-CDS-Ecto-sp9_F_contig10465:1995..2085	1622928256.76965-CDS-Ecto-sp9_F_contig10465:1995..2085	Ectocarpus species9 EcSCA_722f female	CDS	Ecto-sp9_F_contig10465 1996..2085 -
1692277811.4590847-CDS-Ecto-sp9_F_contig10465:1995..2085	1692277811.4590847-CDS-Ecto-sp9_F_contig10465:1995..2085	Ectocarpus species9 EcSCA_722f female	CDS	Ecto-sp9_F_contig10465 1996..2085 -
1622928256.7834685-CDS-Ecto-sp9_F_contig10465:2641..2743	1622928256.7834685-CDS-Ecto-sp9_F_contig10465:2641..2743	Ectocarpus species9 EcSCA_722f female	CDS	Ecto-sp9_F_contig10465 2642..2743 -
1692277811.4690638-CDS-Ecto-sp9_F_contig10465:2641..2743	1692277811.4690638-CDS-Ecto-sp9_F_contig10465:2641..2743	Ectocarpus species9 EcSCA_722f female	CDS	Ecto-sp9_F_contig10465 2642..2743 -
1622928256.7993405-CDS-Ecto-sp9_F_contig10465:3800..3884	1622928256.7993405-CDS-Ecto-sp9_F_contig10465:3800..3884	Ectocarpus species9 EcSCA_722f female	CDS	Ecto-sp9_F_contig10465 3801..3884 -
1692277811.4781375-CDS-Ecto-sp9_F_contig10465:3800..3884	1692277811.4781375-CDS-Ecto-sp9_F_contig10465:3800..3884	Ectocarpus species9 EcSCA_722f female	CDS	Ecto-sp9_F_contig10465 3801..3884 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp9_F_contig10465:277..3884-
coding sequence from alignment at Ecto-sp9_F_contig10465:277..3884-

protein sequence of mRNA_Ecto-sp9_F_contig10465.440.1

>prot_Ecto-sp9_F_contig10465.440.1 ID=prot_Ecto-sp9_F_contig10465.440.1|Name=mRNA_Ecto-sp9_F_contig10465.440.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=174bp
MELAQESILTSSGDSTCIIWDVEMGVTTAHFTDHGGDVMSVSILPSVDKN
VFVSGSCDSLAKVWDIREGKCVQTFQGHESDINSVMFFPDGKAFGTGSDD
SSCRLFDMRCYGEANYFGNDKILCGITSVAFSRSGRLLFAGYDDYNCYVW
DVTNSTGIPAYQLAGHEVRATQA*

mRNA from alignment at Ecto-sp9_F_contig10465:277..3884-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp9_F_contig10465.440.1 ID=mRNA_Ecto-sp9_F_contig10465.440.1|Name=mRNA_Ecto-sp9_F_contig10465.440.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3608bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10465:277..3884- (Ectocarpus species9 EcSCA_722f female)
ATGGAATTGGCGCAGGAGTCTATCCTTACCTCCTCCGGAGACAGCACTTG
CATCATCTGGGACGTGGAGATGGGGGTAACGACGGTACGTTACGTTCGCT
TGATTTTTTTTTTTTGTGTATCTTTACCTGCTCATTGTCGTCAATTAGGT
TTCTCGGTTCATGACCAATGGGCACGTGCGGACATGTTTCGTATCTGGCG
CAGCTTTGTGTTTTCTTTTGCGTATTTTCACTTGCTGTGTCATAGAACCG
CAGGAAAATCTTGTTGTGGTCTAGAGTATACTCACACGTTGTGCCTGCTT
GCAGCCACGTTTTTTTTTGCATACGCTACTTTTAGTGTACAGTTCTGAAT
CAGCACCGCCGAAGCAGCGGCGGCAAAATAGCCACGCACCCCAACTTTGG
CGGTCAACTTTGCTCACACCTTGCGTTTGTAGGGCAGCATGGTATCTCTT
TGAACGTTGGTTAGGGCCTGCCGTCTTAGCTTCACTACGGAATTTGTAAG
AAATTAAATTGGTAGCCGCGCCACCCCCCTGGCCGGGGCGACTTGAAGTT
ATTTGCTCCTCAGTGCCCGTTTCTGGCATCTGCGAATTGATGAGGAGTAT
CCGAGTAGTGCATGACTTCGCACGGGCGGTATGCCTATATTTGCCATCGT
ACTCTGTACCAGTAGTGTTTTTTTGTGTTTCTCGGTCATTCCGTTCTTGG
CTTTCCTTTCTCTTCACACCCCCGGGAGGAAGCTCACAGTAGTACAAGTA
GTGCCCATAGGAGAAGCAATGAAATCAGTTGCTTCTCAACACGACTTTTC
TCGGTTGTTGAGGGCATACTGGTGTCCCGTGCAGTCTGTCAAATTTTGCG
GGGGCGTGTTTTTTTTTTCATGTCGGCTTTATGCACAAGCTATATCTCCT
ACTGAAGTAGAGTTGTTGCTGATTTTGCTTGATTTTTCGCAGCCCTGGAG
ATCCTACCTGCACCCTTGCGTAGCATGTGCAACAGTAGCTACAGCAGTAG
GTTGCCCTCTGGTGGTGGTTTTTCATCGCTCCACACCTGCCCGCTCTGCA
TCTTCGTTGCTTCAGAAGTGCCTTCGTTTGTAACCCGCTTGTTGTTGTTT
TTCTCTTTGTAATGTGTGTTGCGTGAATGTGAAAACTACAGGCGCATTTC
ACAGACCACGGTGGTGACGTCATGTCCGTCTCGATCCTGCCGTCCGTAGA
CAAGAACGTCTTCGTCTCGGGATCGTGCGACTCGCTCGCCAAGGTGTGTA
TGTTTTTATTGTCAACCGCGCTAACCGGCTGATCAAGGTTTGTGTGTGTG
TGTGTTTTTTTTCTTGCTAGCATCGACCGCGCTAACCGGCTGACCAATGA
AAATACGTCAGTCTCATTGCGGTTGAAAACACAACATGCTTCTAAAGGCC
ACGATCATGGACCGTGCCAGAGACCACCCGTCCTTCCCTTCCGTTCTTGA
GTCTCTTGTTCCCCTCGTTTTTCCGGACTGGAGCACCGAGACGATGCGGT
CGTTGTTGTTGCCGTCCGTGGGCATCATTCTCCGCAGCCTTTCCCGCTGG
GTGTTTGCCGTGCCTCTTGGAAGCATTTCGGCTCTCTACTACCAACGAAC
AATAACTAAATAAGTAACGTTATTTGTACCTGTTAATTACTTCTACTTGG
TACTGCTTTTCTTCGAGTGTTGATGTTTCCCTGCGTGTTTCTGGTCGGTC
ATACGGTGCCACGAAGTACATTTTAAGCATGTATTTTTTGTTCATCTTGT
TAAAGCCTAAACATGTACACCTATGATGACAAATACCAACGAACGCTAGG
TGTGGGATATCCGCGAGGGCAAGTGCGTGCAGACTTTCCAGGGGCACGAG
TCGGACATCAACTCGGTCATGTTCTTCCCAGACGGCAAGGTGCGGCACGC
CGGAATTATTTAATCATGAGCCGGATGACTGGCTGTTTTGAGGGCGGGGA
AATGGGCGAGCAATGGGGGGCAATTAGTTTCAATCCAAGTTCGTTTTGTT
TGTTGGAAGCATGCTTTCCGTGGTCCTCTTTTGTTTGTTGTTTCCGGTGA
AGGTTCATGGCGTTGCTTTGCTTTGCTGACCATCAGATGGTTGGCCGTTA
AATTTTCTCGGCTGAGGAGTAGTCGGGTGTCCTTGTAGACCAAAGGATGG
TAGGCGAGCATCGTAGCGCATCCGGACGGCGAGAGCATGACCCAAGCAGC
GAAGCCACTCTAAACCGCGTTTTGTTTTCCACCACCACGATAGAAAAGAG
AGAGAGAGAGAGACAGAAACACACACACACAGGGAGAGAGACAGAGAGAG
GCATATTAGGAACAATAAATACGAAGACAGAAAGAGACTACCCGTTGGAG
ATATAACCAATCGCAGTCGAAGGGGATGTGTTGGAGTCTTTGCAGTGAGT
GGAGGGAAACCGGCTGAAAACTGGGCTTATTTCGAGTCTAGTTAAGCCTA
TACACTGAAATATTATCAGTGATGCCAGCTGGTGCTAATCACAAGAACAT
CTGTATAGGTTCAAATATCACAAGGCGTATCACGGAGCAACGAGGGGCTC
CGACACAGGTACTCTCCAGCATCACATACCTACCCAAGAGGCCGCGCAGC
CGGGTGTTACGACCGGGTACACCAACATCTGGATGTTGGCCGTTTGAGAC
ACAGGCAATCGTTCATTGGTCAAACGACTCCATGCATGCTTTGGATGACC
CCCGCCCCCCTGCGTGATTGGTTCCCCAGGCATTCGGCACCGGCTCGGAT
GACTCTAGCTGCCGGTTGTTCGACATGCGGTGCTACGGAGAGGCCAACTA
CTTCGGAAATGACAAGGTGCGTCGTCTTGGTCTTGCGTGTCGTTGCCGTC
TCTAGCTGTTGTGGTAGTGGTGGTGGTTGTGGTCTGCCGTCTTCGTCTTT
GCTTGTTGTTGTCTTTGTCATTGTTGTCGCTGTTTGTCGGCGCGTGGTGT
GCTTGCGTTCGCTTTCTGTATGCGCTAGCACCGTGCGGATGGGTCGGCCT
TGTTGTCTCTCATGCTACTGTAGCGGAACGGTGTGATTCCGGCTCCTGGT
TCCTCCTGCGTTTGATATCGTGGATGCCTTTGTTTGGTCTACGGCAAGCT
ACCCCCCCCCGCGCCTAATCTGTCTATTTAGGCTGTTCGTTCGTAGAATT
CTCTGCTCGTGTGTCGAGACAGCATTTGTTACGCTGTTCATGTGCTCGTT
ATTCTTGATTTCGTCAGCTAACTCCTCCAAAAACCCAACAACAAATAAGG
TATACTTCGAAGTACTACATGATATGATTTATGTCTTCGGGCCTTCTTGG
GTTCTTTTATCCTCTGGTGCATCCTTGGGTCATTTTGCGCCTGTTTGGGT
GCTTTAGAATCTATTGCTCATCATCTGCCTGTCGGGTCTCGTTGTAATTG
GTGGTTTGCTTGTGGCGACGGTCTATTTCGGCTCTTCTCGCTTTGTCAGA
TTCTGTGCGGCATCACGTCCGTGGCCTTCTCGCGGAGTGGTCGACTCTTG
TTCGCGGGCTACGACGATTACAACTGTTACGTCTGGGACGTGACGAACAG
CACGGGCATCCCGGCCTACCAGCTTGCAGGGCACGAGGTACGGGCAACAC
AAGCTTGA

Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10465:277..3884-

>mRNA_Ecto-sp9_F_contig10465.440.1 ID=mRNA_Ecto-sp9_F_contig10465.440.1|Name=mRNA_Ecto-sp9_F_contig10465.440.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1044bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10465:277..3884- (Ectocarpus species9 EcSCA_722f female)
ATGGAATTGGCGCAGGAGTCTATCCTTACCTCCTCCGGAGACAGCACTTG
CATCATCTGGGACGTGGAGATGGGGGTAACGACGATGGAATTGGCGCAGG
AGTCTATCCTTACCTCCTCCGGAGACAGCACTTGCATCATCTGGGACGTG
GAGATGGGGGTAACGACGGCGCATTTCACAGACCACGGTGGTGACGTCAT
GTCCGTCTCGATCCTGCCGTCCGTAGACAAGAACGTCTTCGTCTCGGGAT
CGTGCGACTCGCTCGCCAAGGCGCATTTCACAGACCACGGTGGTGACGTC
ATGTCCGTCTCGATCCTGCCGTCCGTAGACAAGAACGTCTTCGTCTCGGG
ATCGTGCGACTCGCTCGCCAAGGTGTGGGATATCCGCGAGGGCAAGTGCG
TGCAGACTTTCCAGGGGCACGAGTCGGACATCAACTCGGTCATGTTCTTC
CCAGACGGCAAGGTGTGGGATATCCGCGAGGGCAAGTGCGTGCAGACTTT
CCAGGGGCACGAGTCGGACATCAACTCGGTCATGTTCTTCCCAGACGGCA
AGGCATTCGGCACCGGCTCGGATGACTCTAGCTGCCGGTTGTTCGACATG
CGGTGCTACGGAGAGGCCAACTACTTCGGAAATGACAAGGCATTCGGCAC
CGGCTCGGATGACTCTAGCTGCCGGTTGTTCGACATGCGGTGCTACGGAG
AGGCCAACTACTTCGGAAATGACAAGATTCTGTGCGGCATCACGTCCGTG
GCCTTCTCGCGGAGTGGTCGACTCTTGTTCGCGGGCTACGACGATTACAA
CTGTTACGTCTGGGACGTGACGAACAGCACGGGCATCCCGGCCTACCAGC
TTGCAGGGCACGAGGTACGGGCAACACAAGCTTGAATTCTGTGCGGCATC
ACGTCCGTGGCCTTCTCGCGGAGTGGTCGACTCTTGTTCGCGGGCTACGA
CGATTACAACTGTTACGTCTGGGACGTGACGAACAGCACGGGCATCCCGG
CCTACCAGCTTGCAGGGCACGAGGTACGGGCAACACAAGCTTGA