mRNA_Ecto-sp9_F_contig10313.323.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig10313.323.1 vs.
Match: MFS (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0M0_ECTSI) HSP 1 Score: 421 bits (1081), Expect = 2.680e-143 Identity = 212/223 (95.07%), Postives = 216/223 (96.86%), Query Frame = 1
Query: 1 CLHQTLAIGFDEVYPLYALSTPSVGGLGWNTVQIGQVMVVAGLLLAVCQLVLFPPFIKMVGITYFQRLGCGVGVAAFLAVPGLTSIGWDYDSLFSLSVVANNLIMCSLGSISLALSLGSTTLVPSRMRGKLGGLYNTAESLGRFCGPVGYATTYAWSVSTSALQAFGGWVDYHFVFCASALALVVVGVMAWRTLTVENLMPEEFDRADVDVLHPTDKTVPSSS 669
C+ TLAIGFDEVYPLYALSTPSVGGLGWNTVQIGQVMVVAGLLLAVCQLVLFPPFIKMVGITYFQRLGCGVGVAAFLAVPGLTSIGWDYDSLFSLSVVANNLIMCSLGSISLALSLGSTTLVPSRMRGKLGGLYNTAESLGRFCGPVGYATTYAWSVS S L+AFGGWVDYH VFCASALALVVVGVMAWRTLTVE+LM EE DRADVDV+HPTDKTVPSSS
Sbjct: 347 CIIATLAIGFDEVYPLYALSTPSVGGLGWNTVQIGQVMVVAGLLLAVCQLVLFPPFIKMVGITYFQRLGCGVGVAAFLAVPGLTSIGWDYDSLFSLSVVANNLIMCSLGSISLALSLGSTTLVPSRMRGKLGGLYNTAESLGRFCGPVGYATTYAWSVSPSTLEAFGGWVDYHLVFCASALALVVVGVMAWRTLTVESLMSEELDRADVDVVHPTDKTVPSSS 569
BLAST of mRNA_Ecto-sp9_F_contig10313.323.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH24_9PHAE) HSP 1 Score: 406 bits (1043), Expect = 1.370e-139 Identity = 204/223 (91.48%), Postives = 211/223 (94.62%), Query Frame = 1
Query: 1 CLHQTLAIGFDEVYPLYALSTPSVGGLGWNTVQIGQVMVVAGLLLAVCQLVLFPPFIKMVGITYFQRLGCGVGVAAFLAVPGLTSIGWDYDSLFSLSVVANNLIMCSLGSISLALSLGSTTLVPSRMRGKLGGLYNTAESLGRFCGPVGYATTYAWSVSTSALQAFGGWVDYHFVFCASALALVVVGVMAWRTLTVENLMPEEFDRADVDVLHPTDKTVPSSS 669
C+ TLAIGFDEVYPLYALSTPSVGGLGWNTVQIGQV+V+AGL+LAVCQ VLFP FIKMVGIT FQRLGCGVGVA FLAVPGLTSIGWDYDSLFSLSVVANNLI+CSLGSI+LALSLGSTTLVPSRMRGKLGGLYNTAESLGRFCGPVGYATTYAWSVS S L+AFGGWVDYHFVF SALALVVVGVMAWRTLTVENLM EEFDRADVDV HPTDKTVPSSS
Sbjct: 177 CISATLAIGFDEVYPLYALSTPSVGGLGWNTVQIGQVLVMAGLMLAVCQFVLFPSFIKMVGITSFQRLGCGVGVATFLAVPGLTSIGWDYDSLFSLSVVANNLILCSLGSITLALSLGSTTLVPSRMRGKLGGLYNTAESLGRFCGPVGYATTYAWSVSPSTLEAFGGWVDYHFVFYLSALALVVVGVMAWRTLTVENLMSEEFDRADVDVAHPTDKTVPSSS 399
BLAST of mRNA_Ecto-sp9_F_contig10313.323.1 vs.
Match: MFS (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0L9_ECTSI) HSP 1 Score: 283 bits (723), Expect = 9.880e-91 Identity = 135/200 (67.50%), Postives = 163/200 (81.50%), Query Frame = 1
Query: 1 CLHQTLAIGFDEVYPLYALSTPSVGGLGWNTVQIGQVMVVAGLLLAVCQLVLFPPFIKMVGITYFQRLGCGVGVAAFLAVPGLTSIGWDYDSLFSLSVVANNLIMCSLGSISLALSLGSTTLVPSRMRGKLGGLYNTAESLGRFCGPVGYATTYAWSVSTSALQAFGGWVDYHFVFCASALALVVVGVMAWRTLTVENLM 600
C+ T++IGFDEVYPL+A STP VGGLGW+TV+IG+V+V+ G+L+A CQL+LFPP IKMVGIT +QRLGC +G+AAFLA+P + W+++SL +SV AN L CS G++ LALS+GSTTLVPS MRGKLGGL+NTAESLGRF GP GYA YAWSVS S L AFGGWVD+ FVF ASA AL +V +AWRTLT ENLM
Sbjct: 235 CIISTVSIGFDEVYPLFAFSTPDVGGLGWSTVEIGKVLVMTGVLMACCQLLLFPPLIKMVGITTWQRLGCRIGIAAFLAIPAVNVFSWNFNSLVGVSVAANTLANCSCGAVDLALSIGSTTLVPSNMRGKLGGLFNTAESLGRFIGPAGYAIVYAWSVSPSTLDAFGGWVDHRFVFYASAAALALVAALAWRTLTTENLM 434
BLAST of mRNA_Ecto-sp9_F_contig10313.323.1 vs.
Match: MFS (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRQ3_9PHAE) HSP 1 Score: 286 bits (731), Expect = 5.090e-90 Identity = 137/200 (68.50%), Postives = 164/200 (82.00%), Query Frame = 1
Query: 1 CLHQTLAIGFDEVYPLYALSTPSVGGLGWNTVQIGQVMVVAGLLLAVCQLVLFPPFIKMVGITYFQRLGCGVGVAAFLAVPGLTSIGWDYDSLFSLSVVANNLIMCSLGSISLALSLGSTTLVPSRMRGKLGGLYNTAESLGRFCGPVGYATTYAWSVSTSALQAFGGWVDYHFVFCASALALVVVGVMAWRTLTVENLM 600
C+ T++IGFDEVYPL+ALSTP VGGLGW+TV+IG+V+V+ G+L+A CQL+LFPP IKMVGIT +QRLGC +G+AAFLA+P + W+++SL +SV AN L CS G++ LALS+GSTTLVPS MRGKLGGL+NTAESLGRF GP GYA YAWSVS S L AFGGWVDY FVF ASA AL +V +AWRTLT ENLM
Sbjct: 401 CIISTVSIGFDEVYPLFALSTPDVGGLGWSTVEIGKVLVMTGVLMACCQLLLFPPLIKMVGITTWQRLGCRIGIAAFLAIPAVNVFSWNFNSLVGVSVAANTLANCSCGAVDLALSIGSTTLVPSNMRGKLGGLFNTAESLGRFIGPAGYAIVYAWSVSPSTLDAFGGWVDYRFVFDASAAALALVAALAWRTLTTENLM 600
BLAST of mRNA_Ecto-sp9_F_contig10313.323.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K449_9PHAE) HSP 1 Score: 272 bits (696), Expect = 6.610e-89 Identity = 130/200 (65.00%), Postives = 158/200 (79.00%), Query Frame = 1
Query: 1 CLHQTLAIGFDEVYPLYALSTPSVGGLGWNTVQIGQVMVVAGLLLAVCQLVLFPPFIKMVGITYFQRLGCGVGVAAFLAVPGLTSIGWDYDSLFSLSVVANNLIMCSLGSISLALSLGSTTLVPSRMRGKLGGLYNTAESLGRFCGPVGYATTYAWSVSTSALQAFGGWVDYHFVFCASALALVVVGVMAWRTLTVENLM 600
C+ T++IGFDEVYPL+ALSTP VGGLGW+TV+IG+V+V+ G+L+A CQL LFPP IK+VGIT +QRLGC +G+A FLA+P + W+++SL +S A+ L C G++ LALS+GSTTLVPS MRGKLGGL+NTAESLGRF GP GYA YAWSVS S L AFGGWVDY FVF SA AL +V +AWRTL ENLM
Sbjct: 66 CIISTVSIGFDEVYPLFALSTPDVGGLGWSTVEIGKVLVMTGVLMACCQLFLFPPLIKIVGITTWQRLGCRIGIATFLAIPAVNVFSWNFNSLVGVSRAADTLANCGCGAVDLALSIGSTTLVPSNMRGKLGGLFNTAESLGRFIGPAGYAIVYAWSVSPSTLDAFGGWVDYRFVFNVSAAALALVAALAWRTLATENLM 265
BLAST of mRNA_Ecto-sp9_F_contig10313.323.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJX7_ECTSI) HSP 1 Score: 250 bits (638), Expect = 4.600e-78 Identity = 125/207 (60.39%), Postives = 154/207 (74.40%), Query Frame = 1
Query: 1 CLHQTLAIGFDEVYPLYALSTPSVGGLGWNTVQIGQVMVVAGLLLAVCQLVLFPPFIKMVGITYFQRLGCGVGVAAFLAVPGLTSIGWDYDSLFSLSVVANNLIMCSLGSISLALSLGSTTLVPSRMRGKLGGLYNTAESLGRFCGPVGYATTYAWSVSTSALQAFGGWVDYHFVFCASALALVVVGVMAWRTLTVENLMPEEFDRA 621
C+ Q L IGF+E YPL+ALSTP VGGLGWNT QIG+V+V+ GL +A QL+L PP IK+VGIT +QR+G VG AF+A+P + + W+Y SLFS SV AN C L +++LA+S+GSTTLVPSRMRGKLGGLYN AESLGRF GP G+A TYAWSVS S+ A WV++ FVF SA+ L + V+AW TLT ENLM E + A
Sbjct: 183 CVVQALQIGFEEAYPLFALSTPDVGGLGWNTFQIGKVLVMTGLFMACFQLLLLPPLIKVVGITNWQRVGFVVGALAFIAIPSVRLLSWNYPSLFSASVAANTFASCGLAAVTLAMSVGSTTLVPSRMRGKLGGLYNMAESLGRFLGPAGFAITYAWSVSPSSSAAGFDWVNFRFVFWVSAVLLALCAVLAWPTLTAENLMQGEVEDA 389
BLAST of mRNA_Ecto-sp9_F_contig10313.323.1 vs.
Match: MFS (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5T8_9PHAE) HSP 1 Score: 250 bits (638), Expect = 2.850e-76 Identity = 124/207 (59.90%), Postives = 154/207 (74.40%), Query Frame = 1
Query: 1 CLHQTLAIGFDEVYPLYALSTPSVGGLGWNTVQIGQVMVVAGLLLAVCQLVLFPPFIKMVGITYFQRLGCGVGVAAFLAVPGLTSIGWDYDSLFSLSVVANNLIMCSLGSISLALSLGSTTLVPSRMRGKLGGLYNTAESLGRFCGPVGYATTYAWSVSTSALQAFGGWVDYHFVFCASALALVVVGVMAWRTLTVENLMPEEFDRA 621
C+ L IGFDE YPL+ALSTP VGGLGWNT+QIG+V+V+ GL +A QL+L PP IK+VGIT +QR+G VG AF+A+P + S+ W+Y SLFS SV N C L +++L +S+GSTTLVPSRMRGKLGGLYN AESLGRF GP G+A +YAWSVS S+ A WV++ FVF ASA+ L + V+AW TLT ENLM E + A
Sbjct: 351 CVVMALQIGFDEAYPLFALSTPDVGGLGWNTLQIGKVLVMTGLFMACFQLLLLPPLIKVVGITKWQRVGFCVGALAFIAIPSVRSLSWNYPSLFSASVAVNTFASCGLAAVALTMSVGSTTLVPSRMRGKLGGLYNMAESLGRFLGPAGFAISYAWSVSPSSSAAGVDWVNFRFVFWASAVLLAMCAVLAWSTLTAENLMQGEVEDA 557
BLAST of mRNA_Ecto-sp9_F_contig10313.323.1 vs.
Match: Major (facilitator superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LET0_ECTSI) HSP 1 Score: 202 bits (515), Expect = 1.790e-61 Identity = 99/197 (50.25%), Postives = 139/197 (70.56%), Query Frame = 1
Query: 1 CLHQTLAIGFDEVYPLYALSTPSVGGLGWNTVQIGQVMVVAGLLLAVCQLVLFPPFIKMVGITYFQRLGCGVGVAAFLAVPGLTSIGWDYDSLFSLSVVANNLIMCSLGSISLALSLGSTTLVPSRMRGKLGGLYNTAESLGRFCGPVGYATTYAWSVSTSALQAFGGWVDYHFVFCASALALVVVGVMAWRTLTVE 591
C+ Q+L GF+EV+PL+ALST VGGLGW T++IG+V+ + G ++ V QL +FP IK++G + R GC +G++AFLA P W+Y +LF+ SV + ++ C L ++S+AL++ ST++VPS +RGKL GLY TAES GRF VG+A +AWS+S+ L GWVD+ FVF +SALAL V V+AWRTL E
Sbjct: 53 CVVQSLLTGFEEVFPLWALSTVGVGGLGWGTMEIGKVLFMTGCIMVVAQLFIFPSVIKIIGAVAWMRTGCLLGISAFLATPNAKLFSWNYTTLFAASVASVTVVNCCLAAVSIALAVASTSIVPSSLRGKLSGLYGTAESFGRFTSAVGFAALFAWSISSDNL----GWVDHRFVFYSSALALGVATVVAWRTLPAE 245
BLAST of mRNA_Ecto-sp9_F_contig10313.323.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAX4_9PHAE) HSP 1 Score: 194 bits (494), Expect = 1.700e-55 Identity = 100/213 (46.95%), Postives = 139/213 (65.26%), Query Frame = 1
Query: 1 CLHQTLAIGFDEVYPLYALSTPSVGGLGWNTVQIGQVMVVAGLLLAVCQLVLFPPFIKMVGITYFQRLGCGVGVAAFLAVPGLTSIGWDYDSLFSLSVVANNLIMCSLGSISLALSLGSTTLVPSRMRGKLGGLYNTAESLGRFCGPVGYATTYAWSVSTSALQAFGGWVDYHFVFCASALALVVVGVMAWRTLTVENLMPEEFDRADVDVLH 639
C+ Q+L GF+EV+PL+ALST VGGL W T++IG+V+ V+G ++ V Q+ +FP IK++G + R GC +G+ FLA P W+Y +LF SV + ++ CSL ++ +AL++ ST +V SR+RGKL GLY TAES GRF VG A +AWS+S+ L GWVD+ FVF +SALAL V V+AWRTL E + DV+H
Sbjct: 326 CVVQSLLAGFEEVFPLWALSTVGVGGLDWGTMEIGKVLFVSGCIMVVAQVFIFPSVIKILGAVTWMRTGCLLGICTFLATPNAKLFSWNYTTLFVASVASVTIVNCSLAAVGIALAVASTDIVSSRLRGKLSGLYGTAESFGRFASAVGSAVLFAWSISSDNL----GWVDHRFVFYSSALALGVATVVAWRTLPAEISGDKPAAENVEDVIH 534
BLAST of mRNA_Ecto-sp9_F_contig10313.323.1 vs.
Match: MFS (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJK9_ECTSI) HSP 1 Score: 185 bits (470), Expect = 2.820e-52 Identity = 94/213 (44.13%), Postives = 137/213 (64.32%), Query Frame = 1
Query: 1 CLHQTLAIGFDEVYPLYALSTPSVGGLGWNTVQIGQVMVVAGLLLAVCQLVLFPPFIKMVGITYFQRLGCGVGVAAFLAVPGLTSIGWDYDSLFSLSVVANNLIMCSLGSISLALSLGSTTLVPSRMRGKLGGLYNTAESLGRFCGPVGYATTYAWSVSTSALQAFGGWVDYHFVFCASALALVVVGVMAWRTLTVENLMPEEFDRADVDVLH 639
C+ Q+L GF+EV+PL+ALST VGGL W T++IG+V+ ++G ++ V Q+ +FP IK++G + R GC +G+ FLA P W++ +LF+ V + + C L ++ +AL++ ST++VPSR+RGKL GLY TAES GRF VG +AWS+S+ WVD+ FVF +SAL+L V V+AWRTL E L + DV+H
Sbjct: 289 CVVQSLLAGFEEVFPLWALSTVGVGGLDWGTMEIGKVLFLSGCIMVVAQVFIFPSVIKILGAVTWMRTGCLLGICTFLATPNAKLFSWNHTTLFAALVASVTVANCCLAAVGIALAVASTSIVPSRLRGKLSGLYGTAESFGRFASAVGSGVLFAWSISSDNPD----WVDHRFVFYSSALSLGVATVVAWRTLPAEILGDKPAAENVEDVIH 497 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10313.323.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig10313.323.1 >prot_Ecto-sp9_F_contig10313.323.1 ID=prot_Ecto-sp9_F_contig10313.323.1|Name=mRNA_Ecto-sp9_F_contig10313.323.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=223bp CLHQTLAIGFDEVYPLYALSTPSVGGLGWNTVQIGQVMVVAGLLLAVCQLback to top mRNA from alignment at Ecto-sp9_F_contig10313:215..2076+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig10313.323.1 ID=mRNA_Ecto-sp9_F_contig10313.323.1|Name=mRNA_Ecto-sp9_F_contig10313.323.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=1862bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10313:215..2076+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10313:215..2076+ >mRNA_Ecto-sp9_F_contig10313.323.1 ID=mRNA_Ecto-sp9_F_contig10313.323.1|Name=mRNA_Ecto-sp9_F_contig10313.323.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1338bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10313:215..2076+ (Ectocarpus species9 EcSCA_722f female)back to top |