mRNA_Ecto-sp9_F_contig103.307.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig103.307.1 vs.
Match: Succinate--CoA (ligase [ADP-forming] subunit beta, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0B9_ECTSI) HSP 1 Score: 895 bits (2313), Expect = 0.000e+0 Identity = 460/463 (99.35%), Postives = 460/463 (99.35%), Query Frame = 1
Query: 1 MASMRVVAGCARALRNPRGLVARNSPLLSGKPISATGGAGQQVRRLNVHEYVSMQIMAEHDIDIPVSKMAETPEDAEKACAEIMGGNAMKDVVIKAQVLSGGRGRGHFDNGFESGVHMCLKPSDAKHYASEMLGQKLITKQTGEDGLPCDKVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELIMKEEVDIMTGLTDAQAGKIAEHLKLSSDGPSYEAGKALLKNMYAMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQKDTFQFRDYTQEDTREVEAAKYDLNYIGLTGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEEQVQKAFELLNADPKVATILVNIFGGIMRCDVIASGVINAAKSIGMKKPIVIRLQGTNVEQANELIANSGFKMIISNDLDDAAEKAVAVAEIYSQATKVGIDVELQAASA 1389
MASMRVVAGCARALRNPRGLVARNSPLLSGKPISATGGAGQQVRRLNVHEYVSMQIMAEHDIDIP SKMAETPEDAEKACAEIMGGNAMKDVVIKAQVLSGGRGRGHFDNGFESGVHMCLKPSDAKHYASEMLGQKLITKQTGEDGLPCDKVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELIMKEEVDIMTGLTDAQAGKIAEHLKLSSDGPSYEAGK LLKNMYAMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQKDTFQFRDYTQEDTREVEAAKYDLNYIGLTGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEEQVQKAFELLNADPKVATILVNIFGGIMRCDVIASGVINAAKSIGMKKPIVIRLQGTNVEQANELIANSGFKMIISNDLDDAAEKAVAVAEIYSQATKVGIDVELQ ASA
Sbjct: 1 MASMRVVAGCARALRNPRGLVARNSPLLSGKPISATGGAGQQVRRLNVHEYVSMQIMAEHDIDIPASKMAETPEDAEKACAEIMGGNAMKDVVIKAQVLSGGRGRGHFDNGFESGVHMCLKPSDAKHYASEMLGQKLITKQTGEDGLPCDKVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELIMKEEVDIMTGLTDAQAGKIAEHLKLSSDGPSYEAGKTLLKNMYAMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQKDTFQFRDYTQEDTREVEAAKYDLNYIGLTGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEEQVQKAFELLNADPKVATILVNIFGGIMRCDVIASGVINAAKSIGMKKPIVIRLQGTNVEQANELIANSGFKMIISNDLDDAAEKAVAVAEIYSQATKVGIDVELQTASA 463
BLAST of mRNA_Ecto-sp9_F_contig103.307.1 vs.
Match: Succinate--CoA (ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQF4_9STRA) HSP 1 Score: 594 bits (1532), Expect = 1.430e-203 Identity = 305/451 (67.63%), Postives = 364/451 (80.71%), Query Frame = 1
Query: 43 RNPRGLVARNSPLLSGKPISATGGAGQQVRRLNVHEYVSMQIMAEHDIDIPVSKMAETPEDAEKACAEIM---GGNAMK-DVVIKAQVLSGGRGRGHFDNGFESGVHMCLKPSDAKHYASEMLGQKLITKQTGEDGLPCDKVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELIMKEEVDIMTGLTDAQAGKIAEHLKLSSDGPSYEAGKALLKNMYAMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQKDTFQFRDYTQEDTREVEAAKYDLNYIGLTGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEEQVQKAFELLNADPKVATILVNIFGGIMRCDVIASGVINAAKSIGMKKPIVIRLQGTNVEQANELIANSGFKMIISNDLDDAAEKAVAVAEIYSQATKVGIDVELQAA 1383
R RG + S LL G+ G A Q R LNVHEYVSM+++ H++ P+S MA +PE+AE AC EIM G MK DVVIKAQVLSGGRG GHF+NGF+ GVHMC P++A+ YA +MLG KLITKQTG GLPC KVLLMER+YMRREMYLSIMMDR +GPV+VAC GGTSIEDLAE +PEL+MK V I GLT+ QA KIA+HL+L P+Y+ G +LKN+Y MFI++DCTLVE+NPLAETP+GRV+ACDAKLNFDDNA +RQKD F RDY+QED REVEAAKYDLNYIGLTGNIGCMVNGAGLAM+TMDIIKLKGGDPANFLDVGGGATE QVQKA ELL+AD V I++NIFGGIMRCD+IASGV+NA K++G+KKPI++RLQGTNV+QA ++IA+S FKMI++++L+DAAEKAVAVA + A G++V + A
Sbjct: 8 RGARGAAGQASNLLVGR---VNGAAACQARLLNVHEYVSMKVLGSHNVGTPISIMATSPEEAETACKEIMAKPGPGGMKTDVVIKAQVLSGGRGLGHFENGFKGGVHMCSTPAEARKYAEKMLGNKLITKQTGAGGLPCHKVLLMERVYMRREMYLSIMMDRTYKGPVVVACASGGTSIEDLAEHSPELVMKMPVSITKGLTEEQADKIAKHLELVPGTPAYDNGITMLKNLYEMFIKKDCTLVEVNPLAETPDGRVLACDAKLNFDDNAAFRQKDIFTERDYSQEDPREVEAAKYDLNYIGLTGNIGCMVNGAGLAMATMDIIKLKGGDPANFLDVGGGATESQVQKALELLDADNGVEAIMINIFGGIMRCDIIASGVLNAVKNVGLKKPIIMRLQGTNVDQAKKIIADSDFKMIMTDNLEDAAEKAVAVARVVKDANVAGLNVSFEIA 455
BLAST of mRNA_Ecto-sp9_F_contig103.307.1 vs.
Match: Succinate--CoA (ligase [ADP-forming] subunit beta, mitochondrial n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CEF9_SAPPC) HSP 1 Score: 552 bits (1422), Expect = 3.030e-187 Identity = 289/439 (65.83%), Postives = 342/439 (77.90%), Query Frame = 1
Query: 61 VARNSPLLSGKPISATGGAGQQVRRLNVHEYVSMQIMAEHDIDIPVSKMAETPEDAEKACAEIMGGNAMKDVVIKAQVLSGGRGRGHFDNGFESGVHMCLKPSDAKHYASEMLGQKLITKQTGEDGLPCDKVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELIMKEEVDIMTGLTDAQAGKIAEHLKLSSDGPSYEAGKALLKNMYAMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQKDTFQFRDYTQEDTREVEAAKYDLNYIGLTGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEEQVQKAFELLNADPKVATILVNIFGGIMRCDVIASGVINAAKSIGMKKPIVIRLQGTNVEQANELIANSGFKMIISNDLDDAAEKAVAVAEIYSQATKVGIDVELQ 1377
VA+ +PLL GQQVRRLN+HEY SM+IM + IP S A TP +AE A + GG+A KDVVIKAQ L+GGRG GHF NGF+ GVHMC KP DAK++A +MLG+ L+TKQTGE G+ KV LMER+YMRREMY SI+MDR S GPV+VA P GGTSIED+A + PELI KE V+I TG T Q ++A ++ LS G S + G L+ N+Y MFI D TLVEINPLAETPEG V ACDAK+NFDDNA +R KD F RD TQED REVEA+ YDLNYIGL GNIGC+VNGAGLAM+TMDII L GG PANFLDVGGGATE QV+KAFE+LNADP+V +ILVNIFGGIMRCDVIA+GVI AAK +GMKKPIVIRLQGTNVE+A +LI NSGF+MI++NDLDDAA+KAV +A+I +QA +V ++V +
Sbjct: 7 VAKATPLLRAP--------GQQVRRLNLHEYQSMEIMKSFGVAIPASLHATTPAEAEAAYNTLKGGDATKDVVIKAQALTGGRGLGHFKNGFKGGVHMCTKPEDAKNFAEKMLGETLVTKQTGEKGIEVAKVFLMERVYMRREMYFSILMDRASNGPVLVASPAGGTSIEDVAHATPELIFKEAVNITTGPTSEQLNRLAANMGLS--GESQKRGVELMNNLYNMFIGTDATLVEINPLAETPEGNVYACDAKINFDDNASFRHKDIFAKRDKTQEDPREVEASAYDLNYIGLDGNIGCLVNGAGLAMATMDIISLFGGSPANFLDVGGGATESQVKKAFEILNADPQVKSILVNIFGGIMRCDVIAAGVIAAAKDLGMKKPIVIRLQGTNVEKARQLIENSGFRMIVANDLDDAAQKAVKIADIVAQAEEVHVNVSFE 435
BLAST of mRNA_Ecto-sp9_F_contig103.307.1 vs.
Match: Succinate--CoA (ligase [ADP-forming] subunit beta, mitochondrial n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A485KYE4_9STRA) HSP 1 Score: 551 bits (1419), Expect = 8.290e-187 Identity = 283/420 (67.38%), Postives = 337/420 (80.24%), Query Frame = 1
Query: 118 GQQVRRLNVHEYVSMQIMAEHDIDIPVSKMAETPEDAEKACAEIMGGNAMKDVVIKAQVLSGGRGRGHFDNGFESGVHMCLKPSDAKHYASEMLGQKLITKQTGEDGLPCDKVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELIMKEEVDIMTGLTDAQAGKIAEHLKLSSDGPSYEAGKALLKNMYAMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQKDTFQFRDYTQEDTREVEAAKYDLNYIGLTGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEEQVQKAFELLNADPKVATILVNIFGGIMRCDVIASGVINAAKSIGMKKPIVIRLQGTNVEQANELIANSGFKMIISNDLDDAAEKAVAVAEIYSQATKVGIDVELQ 1377
GQQVRRLN+HEY SMQIM + + IP S+ A TPE+A ++ GG+ KDVVIKAQ L+GGRG GHF NGF+ GVHMC K DAK +A +M+G+ L+TKQTGE G+ KV LMER+YMRREMY SI+MDR SQGPV+VA P GGTSIED+A + PELI KE +DIMTG TD Q ++A ++ L +G S G LL N+Y MFI D TLVEINPLAETP+G+V ACDAK+NFDDNA +RQKD F RD TQED REVEA+ YDLNYIGL GNIGC+VNGAGLAM+TMDII+L GG PANFLDVGGGATE QV+KAFE+LNAD +V +ILVNIFGGIMRCDVIA+G+I AAK +GMKKPIVIRLQGTNVE+A LI NSGF+MI++NDLDDAA+KAV +A+I SQA +V ++V +
Sbjct: 17 GQQVRRLNLHEYQSMQIMQSYGVAIPASQHANTPEEAVNVYNKLKGGDEGKDVVIKAQALTGGRGLGHFKNGFKGGVHMCTKAEDAKTFAQKMIGETLVTKQTGEKGIEVAKVFLMERVYMRREMYFSILMDRASQGPVMVASPAGGTSIEDVAHATPELIFKENIDIMTGPTDEQLKRLASNMGL--EGVSLTRGVELLGNLYKMFIGVDATLVEINPLAETPDGKVFACDAKINFDDNAAFRQKDIFAKRDKTQEDAREVEASAYDLNYIGLDGNIGCLVNGAGLAMATMDIIQLFGGSPANFLDVGGGATESQVKKAFEILNADTQVKSILVNIFGGIMRCDVIAAGIIAAAKELGMKKPIVIRLQGTNVEKARALIENSGFRMIVANDLDDAAQKAVKIADIVSQAEEVHVNVSFE 434
BLAST of mRNA_Ecto-sp9_F_contig103.307.1 vs.
Match: Succinate--CoA (ligase [ADP-forming] subunit beta, mitochondrial n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T9H2_9STRA) HSP 1 Score: 543 bits (1399), Expect = 8.250e-184 Identity = 278/420 (66.19%), Postives = 336/420 (80.00%), Query Frame = 1
Query: 118 GQQVRRLNVHEYVSMQIMAEHDIDIPVSKMAETPEDAEKACAEIMGGNAMKDVVIKAQVLSGGRGRGHFDNGFESGVHMCLKPSDAKHYASEMLGQKLITKQTGEDGLPCDKVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELIMKEEVDIMTGLTDAQAGKIAEHLKLSSDGPSYEAGKALLKNMYAMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQKDTFQFRDYTQEDTREVEAAKYDLNYIGLTGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEEQVQKAFELLNADPKVATILVNIFGGIMRCDVIASGVINAAKSIGMKKPIVIRLQGTNVEQANELIANSGFKMIISNDLDDAAEKAVAVAEIYSQATKVGIDVELQ 1377
GQQVRRLN+HEY SM+IM + + IP S+ A+TPE A + ++ GGN KDVVIKAQ L+GGRG GHF NGF+ GVHMC K DAK +A +M+G+ L+TKQTG G+ KV LMER+Y+RREMY SI+MDR SQGPV+V P GGTSIED+A + PELI KE VDIMTG T+ Q ++A+++ L DGP+ G LL N+Y MFI D T VEINPLAETPEG+V ACDAK+NFDDNA +RQ + F RD TQED REVEA+ YDLNYIGL GNIGC+VNGAGLAM+TMDII+L GG PANFLDVGGGATE QV+KAFE+LNAD +V +ILVNIFGGIMRCDVIA+G+I AAK +GMKKPIVIRLQGTNVE+A LI NSGF+MI++NDLDDAA+KAV +A+I +QA +V ++V +
Sbjct: 16 GQQVRRLNLHEYQSMKIMQSYGVAIPASEAADTPEQAVQVYNKLKGGNDTKDVVIKAQALTGGRGLGHFKNGFKGGVHMCTKAEDAKKFAQKMIGETLVTKQTGVKGIEVAKVFLMERVYLRREMYFSILMDRASQGPVLVGSPAGGTSIEDVAHNTPELIFKEHVDIMTGPTNEQLTRLAKNMGL--DGPALPRGVELLGNLYKMFIGVDATQVEINPLAETPEGQVFACDAKINFDDNAAFRQAEIFAQRDKTQEDAREVEASAYDLNYIGLDGNIGCLVNGAGLAMATMDIIQLFGGSPANFLDVGGGATEAQVKKAFEILNADNQVKSILVNIFGGIMRCDVIAAGIIAAAKDLGMKKPIVIRLQGTNVEKARALIENSGFRMIVANDLDDAAQKAVKIADIVTQAEEVHVNVSFE 433
BLAST of mRNA_Ecto-sp9_F_contig103.307.1 vs.
Match: Succinate--CoA (ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRL5_HETAK) HSP 1 Score: 539 bits (1389), Expect = 8.760e-183 Identity = 269/405 (66.42%), Postives = 331/405 (81.73%), Query Frame = 1
Query: 169 MAEHDIDIPVSKMAETPEDAEKACAEIMGGNAMKDVVIKAQVLSGGRGRGHFDNGFESGVHMCLKPSDAKHYASEMLGQKLITKQTGEDGLPCDKVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELIMKEEVDIMTGLTDAQAGKIAEHLKLSSDGPSYEAGKALLKNMYAMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQKDTFQFRDYTQEDTREVEAAKYDLNYIGLTGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEEQVQKAFELLNADPKVATILVNIFGGIMRCDVIASGVINAAKSIGMKKPIVIRLQGTNVEQANELIANSGFKMIISNDLDDAAEKAVAVAEIYSQATKVGIDVELQAA 1383
MA++ + P +++A TP++AE ++ G+ KDVVIKAQVL+GGRG G F +GF+ GVHMC +P AK YA +MLG L+TKQT +G+ C KV LMER+YMRREMYLS+M+DRG+QGP++VA P GGTSIED+AE PELI + +DIM GLTDAQA K+A +L + PS+ AL+KN+Y MFIE D T VEINPLAET G VM DAKLNFDDNAE+RQK+ +RD+TQED REVEAAK+DLNYIGL+GNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATE QVQKAFE+LNADPKV++ILVNIFGGIMRCD+IA G+INAAK IG+ KPI+IRL+GTNVEQAN LIA+SG+KM + +DL+DAAEKAV+++ I ++A K+G+ V ++A
Sbjct: 1 MAKYGVKTPPAQVATTPDEAESIYQKMTAGDPNKDVVIKAQVLAGGRGLGTFTSGFKGGVHMCTRPGQAKDYAEKMLGNYLVTKQTTAEGVLCSKVFLMERVYMRREMYLSLMLDRGTQGPLMVASPCGGTSIEDVAEQTPELIFTQPIDIMEGLTDAQASKMATNLGMVEGSPSHSDAIALMKNLYTMFIETDATQVEINPLAETSTGEVMCADAKLNFDDNAEFRQKEVHAYRDFTQEDPREVEAAKFDLNYIGLSGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEGQVQKAFEILNADPKVSSILVNIFGGIMRCDIIAGGIINAAKEIGLGKPIIIRLEGTNVEQANRLIADSGYKMTVCDDLEDAAEKAVSISNIMAEANKIGVKVSFESA 405
BLAST of mRNA_Ecto-sp9_F_contig103.307.1 vs.
Match: Succinate--CoA (ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A6T6HZE5_9STRA) HSP 1 Score: 532 bits (1370), Expect = 2.840e-179 Identity = 271/417 (64.99%), Postives = 329/417 (78.90%), Query Frame = 1
Query: 127 VRRLNVHEYVSMQIMAEHDIDIPVSKMAETPEDAEKACAEIMG--GNAMKDVVIKAQVLSGGRGRGHFDNGFESGVHMCLKPSDAKHYASEMLGQKLITKQTGEDGLPCDKVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELIMKEEVDIMTGLTDAQAGKIAEHLKLSSDGPSYEAGKALLKNMYAMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQKDTFQFRDYTQEDTREVEAAKYDLNYIGLTGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEEQVQKAFELLNADPKVATILVNIFGGIMRCDVIASGVINAAKSIGMKKPIVIRLQGTNVEQANELIANSGFKMIISNDLDDAAEKAVAVAEIYSQATKVGIDVE 1371
+R LNVHEY+SM++M H I P +A TP++AE I+ G +KD VIKAQVLSGGRG G F NGF+ GV M KP AK +A+ MLG++L+TKQ +G+ C+KV LMERMYMRREMYLSI+MDR SQGP++V P GGT+IED+A+SNPE+I E +DI+ G+ Q ++A +L L + PS+E L+KN+Y+MF + DCT VE+NPLAETPEG V+ CDAK+NFD NAE+RQ F RD+TQED+REVEA+KYDLNYIGL GNIGCMVNGAGLAMSTMDII+LKGG PANFLDVGGGATE+QVQKAFE+LNADP V ILVNIFGGIMRCDVIASG+INAAK IG++KPIVIRLQGTNV +A +I GFKMII+ DL+DAAEKAV VAEI +QA K+ + V+
Sbjct: 26 IRNLNVHEYLSMELMNAHQIATPAGHVASTPDEAEHIFQNILNKPGEPLKDAVIKAQVLSGGRGLGTFKNGFKGGVQMVTKPGQAKDFAASMLGEELVTKQA-PNGIICNKVFLMERMYMRREMYLSILMDRASQGPLLVGSPRGGTAIEDIAKSNPEVIFTEPIDIVEGIQQDQCERMATNLGLEAGSPSHENAITLMKNLYSMFTQCDCTQVEVNPLAETPEGDVVVCDAKVNFDSNAEYRQSSIFDKRDFTQEDSREVEASKYDLNYIGLDGNIGCMVNGAGLAMSTMDIIQLKGGAPANFLDVGGGATEDQVQKAFEILNADPNVHAILVNIFGGIMRCDVIASGIINAAKEIGIRKPIVIRLQGTNVNEAKTMIEGCGFKMIIAEDLEDAAEKAVGVAEIVAQADKIQVGVK 441
BLAST of mRNA_Ecto-sp9_F_contig103.307.1 vs.
Match: Succinate--CoA (ligase [ADP-forming] subunit beta, mitochondrial n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUJ9_9STRA) HSP 1 Score: 522 bits (1345), Expect = 1.530e-175 Identity = 278/435 (63.91%), Postives = 330/435 (75.86%), Query Frame = 1
Query: 70 NSPLLSGKPISATGGAGQQVRRLNVHEYVSMQIMAEHDIDIPVSKMAETPEDAEKACAEIMGGNAMKDVVIKAQVLSGGRGRGHFDNGFESGVHMCLKPSDAKHYASEMLGQKLITKQTGEDGLPCDKVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELIMKEEVDIMTGLTDAQAGKIAEHLKLSSDGPSYEAGKALLKNMYAMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQKDTFQFRDYTQEDTREVEAAKYDLNYIGLTGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEEQVQKAFELLNADPKVATILVNIFGGIMRCDVIASGVINAAKSIGMKKPIVIRLQGTNVEQANELIANSGFKMIISNDLDDAAEKAVAVAEIYSQATKVGIDVEL 1374
NS LSG A GQQ R LNVHEY+SM IM + I P ++ + ++AE ++ D V+KAQVLSGGRG G F NGF+ GVH+ D K + MLGQ L+TKQ+G G+ C+KVLL+ER+YMRREMYLSIMMDR +QGP+IVA P GGTSIED+A SNPE I E +DIM GL++ A IA + L ++ AG L+K +Y M I D TLVEINPLAET +GR++A DAKLNFDDNAE+RQK F RDYTQED REVEA KYDLNYIGL+GNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEEQV KAFE+LNADPKV TILVNIFGGIMRCDVIA+G+++AAK IGMKKPIVIRLQGTNV++A +LI SGF+MI+ ++L++AA KAVA+A I QA V IDV++
Sbjct: 7 NSARLSGAKQKALL-RGQQARMLNVHEYISMDIMKGYGIATPTGQVVSSVDEAEHVYVNMLNKG---DAVVKAQVLSGGRGLGTFKNGFKGGVHLATTLGDVKKFTESMLGQHLVTKQSGPAGIVCNKVLLVERLYMRREMYLSIMMDRTTQGPMIVASPVGGTSIEDVAASNPEKIFTEPIDIMEGLSEEAAAGIATKIGLEPGTATHAAGADLVKRLYKMMIATDATLVEINPLAETNDGRIVAADAKLNFDDNAEYRQKQIFAKRDYTQEDPREVEAHKYDLNYIGLSGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEEQVHKAFEILNADPKVKTILVNIFGGIMRCDVIAAGILSAAKQIGMKKPIVIRLQGTNVDEAQKLIQASGFRMIVVDELEEAATKAVAIANIVKQAEDVKIDVQV 437
BLAST of mRNA_Ecto-sp9_F_contig103.307.1 vs.
Match: Succinate--CoA (ligase [ADP-forming] subunit beta, mitochondrial n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K8M0_FISSO) HSP 1 Score: 518 bits (1334), Expect = 6.660e-174 Identity = 267/419 (63.72%), Postives = 326/419 (77.80%), Query Frame = 1
Query: 127 VRRLNVHEYVSMQIMAEHDIDIPVSKMAETPEDAEKACAEIMG--GNAMKDVVIKAQVLSGGRGRGHFDNGFESGVHMCLKPSDAKHYASEMLGQKLITKQTGEDGLPCDKVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELIMKEEVDIMTGLTDAQAGKIAEHLKLSSDGPSYEAGKALLKNMYAMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQKDTFQFRDYTQEDTREVEAAKYDLNYIGLTGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEEQVQKAFELLNADPKVATILVNIFGGIMRCDVIASGVINAAKSIGMKKPIVIRLQGTNVEQANELIANSGFKMIISNDLDDAAEKAVAVAEIYSQATKVGIDVELQ 1377
VR LNVHEYVSM+IM H I P +A TPE+AE+ + G ++DVVIKAQVLSGGRG GHF +GF+ GVHM K A+ +A MLG++L+TKQ +G+ C+KVLLMERMYMR EMYLSI+MDR SQGP++VA P GGTSIED+A +NPE+I + +DI GLTD QA ++A +L L + L+KN+Y MFI DCT VE+NPLAETP G ++ CDAK+NFDDNAE+RQ F RD TQED REV A++YDLNYIGL GNIGCMVNGAGLAMSTMDII+LKGG PANFLDVGGGA+E+QVQKAFE+LNADPKV ILVNIFGGIMRCDVIA+G++NA K IG+ KPIVIRLQGTNV++A LI S ++MI+++DL+ AAEKAV VAEI +QA K+ +DV+ +
Sbjct: 22 VRHLNVHEYVSMEIMQAHGIKTPNCSVASTPEEAEQIFVHKLNKPGTPLQDVVIKAQVLSGGRGLGHFKSGFKGGVHMVTKAGQARDFAKSMLGEELVTKQA-PNGIICNKVLLMERMYMRNEMYLSILMDRASQGPLMVASPRGGTSIEDVAATNPEVIFTQPIDITVGLTDEQAQRMAGNLGLEPGSEGHAQAVTLMKNLYNMFIACDCTQVEVNPLAETPSGDIVVCDAKVNFDDNAEFRQTGIFARRDTTQEDPREVAASEYDLNYIGLDGNIGCMVNGAGLAMSTMDIIQLKGGSPANFLDVGGGASEQQVQKAFEILNADPKVKAILVNIFGGIMRCDVIANGILNAVKEIGISKPIVIRLQGTNVDKAKTLIEGSPYRMILADDLEAAAEKAVGVAEIVAQAEKIEVDVKFE 439
BLAST of mRNA_Ecto-sp9_F_contig103.307.1 vs.
Match: Succinate--CoA (ligase [ADP-forming] subunit beta, mitochondrial n=3 Tax=Pythium TaxID=4797 RepID=A0A2D4BIQ5_PYTIN) HSP 1 Score: 516 bits (1329), Expect = 3.630e-173 Identity = 272/441 (61.68%), Postives = 333/441 (75.51%), Query Frame = 1
Query: 55 GLVARNSPLLSGKPISATGGAGQQVRRLNVHEYVSMQIMAEHDIDIPVSKMAETPEDAEKACAEIMGGNAMKDVVIKAQVLSGGRGRGHFDNGFESGVHMCLKPSDAKHYASEMLGQKLITKQTGEDGLPCDKVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELIMKEEVDIMTGLTDAQAGKIAEHLKLSSDGPSYEAGKALLKNMYAMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQKDTFQFRDYTQEDTREVEAAKYDLNYIGLTGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEEQVQKAFELLNADPKVATILVNIFGGIMRCDVIASGVINAAKSIGMKKPIVIRLQGTNVEQANELIANSGFKMIISNDLDDAAEKAVAVAEIYSQATKVGIDVELQ 1377
G + RN+ S +S QQVRRLN+HE+ S++IM + + P A TPE+AE A I G A DVVIKAQ L+GGRG G F NGF+ GVHMC P A+ A +MLGQ L+TKQTGE G+ KV L+ER+YMRREMY SI+MDR SQGPVIVA P GGTSIED+AE+ PELI KE+VDI TG TDAQ +A+ L D S +A+++N+Y +FI D TLVEINP+AET G + ACDAKLNFDDNA +R K+ F RD +QED REVEA++YDLNYIGL GNIGC+VNGAGLAM+TMDII L GG PANFLDVGGGATE QV+KAFE+LN D +V +ILVNIFGGIMRCDVIA+G++ AAK +G+KKPI+IRLQGTNVE+A ELIA SGFKMI+++DL+DAA+KAV +A+I +QA + I+V +
Sbjct: 3 GRILRNNRAASAL-LSLPAAQRQQVRRLNLHEFQSLEIMKGYGVATPRGIPATTPEEAEAAFNAIRDGRAGVDVVIKAQALTGGRGLGKFKNGFQGGVHMCTSPEQAREIAKKMLGQTLVTKQTGEKGIEVAKVFLVERVYMRREMYFSILMDRASQGPVIVASPAGGTSIEDVAEATPELIFKEKVDITTGPTDAQVTHLAK--SLGGDANSQPKLEAMIRNLYNLFIGVDATLVEINPMAETSTGEIFACDAKLNFDDNAAFRHKEIFAQRDKSQEDPREVEASQYDLNYIGLDGNIGCLVNGAGLAMATMDIISLFGGSPANFLDVGGGATESQVKKAFEILNRDEQVKSILVNIFGGIMRCDVIAAGIVAAAKDLGLKKPIIIRLQGTNVEKARELIAQSGFKMIVADDLEDAAQKAVKIADIVAQAEEANINVSFE 440 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig103.307.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig103.307.1 >prot_Ecto-sp9_F_contig103.307.1 ID=prot_Ecto-sp9_F_contig103.307.1|Name=mRNA_Ecto-sp9_F_contig103.307.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=464bp MASMRVVAGCARALRNPRGLVARNSPLLSGKPISATGGAGQQVRRLNVHEback to top mRNA from alignment at Ecto-sp9_F_contig103:42596..53633- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig103.307.1 ID=mRNA_Ecto-sp9_F_contig103.307.1|Name=mRNA_Ecto-sp9_F_contig103.307.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=11038bp|location=Sequence derived from alignment at Ecto-sp9_F_contig103:42596..53633- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig103:42596..53633- >mRNA_Ecto-sp9_F_contig103.307.1 ID=mRNA_Ecto-sp9_F_contig103.307.1|Name=mRNA_Ecto-sp9_F_contig103.307.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2784bp|location=Sequence derived from alignment at Ecto-sp9_F_contig103:42596..53633- (Ectocarpus species9 EcSCA_722f female)back to top |