mRNA_Ecto-sp9_F_contig10258.272.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig10258.272.1 vs.
Match: Molybdenum (cofactor sulfurase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4D6_ECTSI) HSP 1 Score: 365 bits (938), Expect = 2.030e-114 Identity = 211/252 (83.73%), Postives = 217/252 (86.11%), Query Frame = 1
Query: 1 MPCSLIRAAAIGXXXXXXXXXXXXXXXXX----DWSSHNMADIPPPHIKEDNDGGRAMKTVMPWFPTAMGLLGAWRSSSSPAPAAEGGVGREAEDAARSNRAFANEAQFLLISRASVAKVNDIIRRESGSGSGIDGVEEDGGDGGGVAPWRRGGSSQEQVTTAHFRPNFVVDGVRAHEEDGWKSVRIGEALRLRVTGPCSR--CSMINIDPENGDTSGVALRVLAGYRRERANILFGQFLALDRQSLPPWGP 738
+PCSL+RAAA+ XXXXXXXXXXXXXXX DWSSHNMADIPP H+KEDNDGGRA+KTVMPWFPTAMGLLGAWRSSSSPAPAAEGGVG EAEDAA SNRAFANEAQFLLISRASVAK EDGGD GGVAP RGGS QEQVTTAHFRPNFVV+GVRAHEEDGWKSVRIGEALRLRVTGPCSR CSMINIDPENGDTSGVALRVLAGYRRERANILFGQFLALDRQSLPPWGP
Sbjct: 931 VPCSLVRAAAVDSSXXXXXXXXXXXXXXXXXXXDWSSHNMADIPPLHMKEDNDGGRAVKTVMPWFPTAMGLLGAWRSSSSPAPAAEGGVGGEAEDAAASNRAFANEAQFLLISRASVAK-------------------EDGGDDGGVAPRSRGGSRQEQVTTAHFRPNFVVEGVRAHEEDGWKSVRIGEALRLRVTGPCSRWRCSMINIDPENGDTSGVALRVLAGYRRERANILFGQFLALDRQSLPPWGP 1163
BLAST of mRNA_Ecto-sp9_F_contig10258.272.1 vs.
Match: Molybdenum (cofactor sulfurase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPE6_9PHAE) HSP 1 Score: 358 bits (920), Expect = 8.000e-111 Identity = 204/246 (82.93%), Postives = 210/246 (85.37%), Query Frame = 1
Query: 1 MPCSLIRAAAIGXXXXXXXXXXXXXXXXXDWSSHNMADIPPPHIKEDNDGGRAMKTVMPWFPTAMGLLGAWRSSSSPAPAAEGGVGREAEDAARSNRAFANEAQFLLISRASVAKVNDIIRRESGSGSGIDGVEEDGGDGGGVAPWRRGGSSQEQVTTAHFRPNFVVDGVRAHEEDGWKSVRIGEALRLRVTGPCSRCSMINIDPENGDTSGVALRVLAGYRRERANILFGQFLALDRQSLPPWGP 738
+PCSL+RAAA+ XXXXXXXXXXXX +EDNDG RA+ T MPWFP A+ LL WRSSSSPAPAAEGGVG EAEDAA SNRAFANEAQFLLISRASVAKVNDIIRRES SGSGIDGVEEDGGDGG VAP RRGGS QEQVTTAHFRPNFVVDGVRAHEEDGWKSVRIGEALRLRVTGPCSRCSMINIDPENGDTSGVALRVLA YRRERANILFGQFLALD QSLPPWGP
Sbjct: 1136 VPCSLVRAAAVDFSTAAXXXXXXXXXXXXXXXXXXXXXX---XXQEDNDGDRAINTGMPWFPAAVRLLVGWRSSSSPAPAAEGGVGGEAEDAAASNRAFANEAQFLLISRASVAKVNDIIRRESASGSGIDGVEEDGGDGGVVAPRRRGGSRQEQVTTAHFRPNFVVDGVRAHEEDGWKSVRIGEALRLRVTGPCSRCSMINIDPENGDTSGVALRVLAAYRRERANILFGQFLALDWQSLPPWGP 1378
BLAST of mRNA_Ecto-sp9_F_contig10258.272.1 vs.
Match: Molybdenum (cofactor sulfurase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2R2_9STRA) HSP 1 Score: 160 bits (404), Expect = 7.390e-41 Identity = 93/156 (59.62%), Postives = 105/156 (67.31%), Query Frame = 1
Query: 259 REAEDAARSNRAFANEAQFLLISRASVAKVNDIIRRESGSGSGIDGVEEDGGDGGGVAPWRRGGSSQE-QVTTAHFRPNFVVDGVRAHEEDGWKSVRIGEA------LRLRVTGPCSRCSMINIDPENGDTSGVALRVLAGYRRERANILFGQFLA 705
R AE A +RAF+NEAQ+LLISRASVA+VN++IRRES + G AP + + + QVT HFRPNFVV GV AH EDGW V + A VTG CSRC+MINIDPE GDTSGVALRVLAGYRRERANILFGQFLA
Sbjct: 739 RSAEGA---DRAFSNEAQYLLISRASVARVNEVIRRESAAA--------------GEAPDAQAAADRPAQVTVEHFRPNFVVGGVPAHAEDGWSRVTMQRASGGAPCAAFSVTGSCSRCAMINIDPETGDTSGVALRVLAGYRRERANILFGQFLA 877
BLAST of mRNA_Ecto-sp9_F_contig10258.272.1 vs.
Match: Molybdenum (cofactor sulfurase n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RWD5_SAPDV) HSP 1 Score: 109 bits (272), Expect = 2.630e-23 Identity = 63/136 (46.32%), Postives = 73/136 (53.68%), Query Frame = 1
Query: 295 FANEAQFLLISRASVAKVNDIIRRESGSGSGIDGVEEDGGDGGGVAPWRRGGSSQEQVTTAHFRPNFVVDGVRAHEEDGWKSVRIGEALRLRVTGPCSRCSMINIDPENGDTSGVALRVLAGYRRERANILFGQFL 702
FANEA +LL+SR SVA +N G + V+ A FR N V+DG R +EED WK VR+G+ R V GPCSRCSMINIDP G S L+ LA YRRERA I FGQFL
Sbjct: 639 FANEAPYLLLSRGSVADMN--------------------------------GRMKTPVSEAVFRANIVIDGCRPYEEDSWKVVRVGDT-RFDVLGPCSRCSMINIDPTTGAFSPAPLQTLASYRRERAKIFFGQFL 741
BLAST of mRNA_Ecto-sp9_F_contig10258.272.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7W7_PYTOL) HSP 1 Score: 108 bits (271), Expect = 3.650e-23 Identity = 65/149 (43.62%), Postives = 78/149 (52.35%), Query Frame = 1
Query: 262 EAEDAARSNRAFANEAQFLLISRASVAKVNDIIRRESGSGSGIDGVEEDGGDGGGVAPWRRGGSSQEQVTTAHFRPNFVVDGVRAHEEDGWKSVRIGEALRLRVTGPCSRCSMINIDPENGDTSGVALRVLAGYRRERANILFGQFLAL 708
E D + + FAN+AQFLLISRASVA +N + + QV FR N VVDG ED W+SVR G + L VTGPCSRCSMINIDP G L+ L+ YRRERA+I+FGQ+L L
Sbjct: 673 ERSDTSNAQIGFANQAQFLLISRASVANLNATLTAAD---------------------------ADLQVQEDAFRANLVVDGCEPFAEDSWRSVRAGNVV-LGVTGPCSRCSMINIDPSTGAFHRAPLQTLSRYRRERASIIFGQYLTL 793
BLAST of mRNA_Ecto-sp9_F_contig10258.272.1 vs.
Match: Molybdenum (cofactor sulfurase n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067D1G3_SAPPC) HSP 1 Score: 108 bits (270), Expect = 4.850e-23 Identity = 63/136 (46.32%), Postives = 72/136 (52.94%), Query Frame = 1
Query: 295 FANEAQFLLISRASVAKVNDIIRRESGSGSGIDGVEEDGGDGGGVAPWRRGGSSQEQVTTAHFRPNFVVDGVRAHEEDGWKSVRIGEALRLRVTGPCSRCSMINIDPENGDTSGVALRVLAGYRRERANILFGQFL 702
FANEA +LL+SR SVA +N G + V+ A FR N V+DG +EED WK VR+GE R V GPCSRCSMINIDP G S L+ LA YRRERA I FGQFL
Sbjct: 646 FANEAPYLLLSRGSVADMN--------------------------------GRMKTPVSEAVFRANIVIDGCGPYEEDAWKGVRVGET-RFDVLGPCSRCSMINIDPTTGAFSPAPLQTLASYRRERAKIFFGQFL 748
BLAST of mRNA_Ecto-sp9_F_contig10258.272.1 vs.
Match: Molybdenum (cofactor sulfurase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UC23_9STRA) HSP 1 Score: 101 bits (252), Expect = 1.260e-20 Identity = 72/180 (40.00%), Postives = 92/180 (51.11%), Query Frame = 1
Query: 295 FANEAQFLLISRASVAKVNDIIRRESGSGSGI--DGVEEDGGDGGGVAPWRRGGSSQEQVTTAHFRPNFVVDGVRAHEEDGWKSVRI---------GE---------ALRLRVTGPCSRCSMINIDP-----------ENGDTSGV----------ALRVLAGYRRERANILFGQFLALD 711
F NEAQFLLIS ASVA +ND+I ++ + +GV D + VT +FRPN V+DG AH+ED WKSV + G+ +RL+VTGPC+RCSM+NID + TS V L++LA YRRE+ANI FGQFLA D
Sbjct: 848 FTNEAQFLLISSASVAHLNDLIAQQVDLDYALCYEGVRSD----------------RCYVTLENFRPNLVIDGGVAHQEDLWKSVDVLPGDRDEGGGQRREVGFREMGVRLKVTGPCARCSMVNIDHRCDLSASKKGLDPAMTSDVEKVLPAQVAPVLKMLASYRREKANIYFGQFLAFD 1011
BLAST of mRNA_Ecto-sp9_F_contig10258.272.1 vs.
Match: Molybdenum (cofactor sulfurase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZM48_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 1.310e-19 Identity = 62/144 (43.06%), Postives = 73/144 (50.69%), Query Frame = 1
Query: 295 FANEAQFLLISRASVAKVNDIIRRESGSGSGIDGVEEDGGDGGGVAPWRRGGSSQEQVTTAHFRPNFVVDGVRAHEEDGWKSVRIGEALRLRVTGPCSRCSMINIDPENGDTSGVALRVLAGYRRERANILFGQFLALDRQSLP 726
FANEA FLL+SRASVA +N + V ED FR N +VDG H+ED W+ V +G V GPC RCSM+NIDP G S L+ LAGYRR++A I FGQFL RQS P
Sbjct: 632 FANEAPFLLLSRASVAAMNCRLPTP---------VSED-----------------------VFRANLIVDGCAPHDEDSWRRVDVGSEA-FDVLGPCPRCSMVNIDPTTGAFSPAPLQTLAGYRRDKARIFFGQFL---RQSAP 739
BLAST of mRNA_Ecto-sp9_F_contig10258.272.1 vs.
Match: Molybdenum (cofactor sulfurase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XIF4_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 1.370e-19 Identity = 63/159 (39.62%), Postives = 85/159 (53.46%), Query Frame = 1
Query: 268 EDAARSNRAFANEAQFLLISRASVAKVNDIIRRESGSGSGIDGVEEDGGDGGGVAPWRRGGSSQEQVTTAHFRPNFVVDGVRAHEEDGWKSVRI----------GEA----LRLRVTGPCSRCSMINIDPENGDTSGVALRVLAGYRRERANILFGQFL 702
E A S FAN+AQ+LL+SRASVA +N +R +GS V+ED FR N +VDG A EEDGW +++ G++ + V+GPCSRCSM+N+DP+ G + L+ LA YRRER++I FGQFL
Sbjct: 706 EQRASSKIGFANQAQYLLMSRASVADLNTALRA-AGSAE----VDEDA-----------------------FRANLIVDGCAAFEEDGWTRLQVETGGRDDPEAGDSDDGRVEFDVSGPCSRCSMVNVDPKTGAFNRAPLQALARYRRERSSIFFGQFL 836
BLAST of mRNA_Ecto-sp9_F_contig10258.272.1 vs.
Match: Molybdenum (cofactor sulfurase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024USG2_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 6.030e-19 Identity = 62/138 (44.93%), Postives = 73/138 (52.90%), Query Frame = 1
Query: 295 FANEAQFLLISRASVAKVNDIIRRESGSGSGIDGVEEDGGDGGGVAPWRRGGSSQEQVTTAHFRPNFVVDGVRAHEEDGWKSVRIGEALRLRVTGPCSRCSMINIDPENGDTSGVALRVLAGYRRERANILFGQFLAL 708
FANEA FLLISRASV +N S GS +D E V FR NF+VDG AH ED W V IG + L V GPC RC+M+NI+ G++ L+ LA YRR+R I FGQFLAL
Sbjct: 651 FANEAPFLLISRASVTLMN------SKFGSDVD----------------------EDV----FRANFIVDGCDAHAEDRWSEVAIG-SHSLAVLGPCGRCTMVNINQTTGESEAGPLKHLASYRRDRGKIYFGQFLAL 755 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10258.272.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig10258.272.1 >prot_Ecto-sp9_F_contig10258.272.1 ID=prot_Ecto-sp9_F_contig10258.272.1|Name=mRNA_Ecto-sp9_F_contig10258.272.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=268bp MPCSLIRAAAIGGNAAAAGTAAGGGGGGGDWSSHNMADIPPPHIKEDNDGback to top mRNA from alignment at Ecto-sp9_F_contig10258:1464..3275+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig10258.272.1 ID=mRNA_Ecto-sp9_F_contig10258.272.1|Name=mRNA_Ecto-sp9_F_contig10258.272.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=1812bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10258:1464..3275+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10258:1464..3275+ >mRNA_Ecto-sp9_F_contig10258.272.1 ID=mRNA_Ecto-sp9_F_contig10258.272.1|Name=mRNA_Ecto-sp9_F_contig10258.272.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1608bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10258:1464..3275+ (Ectocarpus species9 EcSCA_722f female)back to top |