mRNA_Ecto-sp9_F_contig1025.266.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig1025.266.1 vs.
Match: Protein (kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JPQ6_9PHAE) HSP 1 Score: 1147 bits (2968), Expect = 0.000e+0 Identity = 634/724 (87.57%), Postives = 647/724 (89.36%), Query Frame = 1
Query: 55 MSGMDPASTRWEQRTDTYLVSKSGGWRPAEGSRR-QGREKNDFAAPGDTNSTNSTDGANVKIAGVVLVIGFLALVLWKWCRRKRTTPVGDNEARVRTGAARDEAESAVDLEQGGSPEVVVAVPLAAESASAPALEEGDAAAAAAVVLPTTVPLXXXXXXXXXXXXGGAPTTPPFPADVQEKDDQRSVEEQRTALGAAASPGAECTVEPTPAATAXXXXXXGDDIDQTPRRRGLRKRQRALAQRRDTLEAGAAEASRREHEAQENIDELSAYQAATTDRPNHDRVVGEARQDELRSQLRAERASDHAAESLERAEIEEWEGRAVRAEQHAGELEHALAEQEHEAVVLXXXXXXXXHGGEEGVLEAGDEHGAAAGPAPAETDHTEEMGLARSAGTAAEGSIQELFVANSIEETGIAEMATTVKHVMGVVSHDRERLTVHRGLGQGKCGKVEEVEFADFPGECFALKTVAKGADEYTKHAALVEMMVFARLAGQPHDNVLGALAVDDSSPLMPMMMPKATDDLETRMNNDSFAIGDKLRQVLTAISVLVVDLARATEHLHGMNIVHRDIKPGNLLVFETEELGLHGKLADFGFAREIGESCPAMMGTPGYMAFESMSREPVAGAAGQDVVGVAMVLLMVCLRKELRSPNLYANMALINSDEMTRLKELFQRMTLGEDISAEKELAQIDMTKRTMADGSFAAMMLSADKLDPALKSPEMLRESLPYFL 2223
MSGMDPASTRWEQRTDT+LVSKSGGWRPA GSRR QGRE DFAA GDTNSTNST GANVKIA VVLV+GFLALVLWK CRRKRTT G+N+ARVRTGAARDEAE AVDLEQGGSPEVVV VP AAESASAP LEEGDAAA VVLPTTVPL GGAPTTPPFPADVQ KDD+RSV EQRT LGAAASPGAECTVEP PAATA DDIDQTPRRRGL+KR RALAQRR TLE GAAEASRRE EAQE IDELSA QAA T+R NHDR VGEARQDELRSQLRAERASDH+ ESLERAEIEEWE RA+RAEQHA E EHA+AEQEHEAVVL H GE+G DEHGAAAGPAPAE DH E MGLARSAGTAAEGSIQELFVANSIEETGIAEMATTVKHVMGVVSHDRERLTVHRGLGQGKCGKVEEVEFADFP E FALKTVAKGADEYTKHAALVEMMVFARLAGQPHDNVLGALAVDDSSPLMP+MMPKATDDLETRMNNDS AIGDKLRQVLTAISVLVVDLARAT HLHGMNIVHRDIKPGNLLVFETEELGLHGKLADFGFAREIGESCPAMMGTPGYMAFESMSR PVAGAAGQDVVGVAMVLLMVCLRKELRSPNLYANMALINSDEMTRLKELFQRMTLGEDISAEKELAQIDMTKRTMADGSFAAMMLSADKLDP LKSPEML ESLP+FL
Sbjct: 1 MSGMDPASTRWEQRTDTFLVSKSGGWRPAAGSRRLQGREIYDFAASGDTNSTNSTGGANVKIAVVVLVVGFLALVLWKCCRRKRTTLDGENKARVRTGAARDEAEGAVDLEQGGSPEVVVVVPNAAESASAPMLEEGDAAA---VVLPTTVPLATEVSRAADIEEGGAPTTPPFPADVQGKDDKRSVNEQRTELGAAASPGAECTVEPVPAATAAAPPP-SDDIDQTPRRRGLQKRLRALAQRRATLETGAAEASRREGEAQEKIDELSALQAAATNRLNHDRAVGEARQDELRSQLRAERASDHS-ESLERAEIEEWESRALRAEQHASEPEHAIAEQEHEAVVLENLLSEEQHDGEKG-----DEHGAAAGPAPAEVDHAEAMGLARSAGTAAEGSIQELFVANSIEETGIAEMATTVKHVMGVVSHDRERLTVHRGLGQGKCGKVEEVEFADFPEEYFALKTVAKGADEYTKHAALVEMMVFARLAGQPHDNVLGALAVDDSSPLMPIMMPKATDDLETRMNNDSLAIGDKLRQVLTAISVLVVDLARATRHLHGMNIVHRDIKPGNLLVFETEELGLHGKLADFGFAREIGESCPAMMGTPGYMAFESMSRGPVAGAAGQDVVGVAMVLLMVCLRKELRSPNLYANMALINSDEMTRLKELFQRMTLGEDISAEKELAQIDMTKRTMADGSFAAMMLSADKLDPTLKSPEMLLESLPHFL 714
BLAST of mRNA_Ecto-sp9_F_contig1025.266.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWE9_9PHAE) HSP 1 Score: 289 bits (740), Expect = 5.000e-80 Identity = 168/347 (48.41%), Postives = 216/347 (62.25%), Query Frame = 1
Query: 1240 GSIQELFVANSIEETGIAEMATTVKHVMGVVSHDRERLTVHRGLGQGKCGKVEEVEFADFPGECFALKTVAKGADEYTKHAALVEMMVFARLAGQPHDNVLGALAVDDSSPLMPMMMPKATDDLETRMNNDSFAIGDKLRQVLTAISVLVVDLARATEHLHGMNIVHRDIKPGNLLVFETEELGLHGKLADFGFAREIGESCPAMMGTPGYMAFESMSREPVAGAAGQDVVGVAMVLLMVCLRKELRSPNLYAN-------------------MALINSDEMTRLKELFQRMTLGEDISAEKELAQIDMTKRTMADGSFAAMMLSADKLDPALKSPEMLRESLPYFL 2223
GSI+ LF+AN E ++ + + + + + + LG G G+V++V +A PG+ FA+KTV + A + ALVEM VFARLA PH NVLGAL++DD S LMP+++PKA DL + +N+D+ +G+KLR LVVDLAR +HLH M +VHRDIKPGN+LVFE+EE GLH KLADFGF EIGE CP MGT G MAFE+MS +PV GA QDVV VA+VLLMVCL++E R NL+ L +DE RL+ L +R LG+DIS E +L +M++RTMADGSF A LS DKLD L+S E L P L
Sbjct: 973 GSIRRLFLANLAEVYASDQVQS---FAINALKTAHMPMVLAQPLGYGSFGRVDDVSYASLPGQSFAMKTVTQAASLSARFCALVEMTVFARLARTPHHNVLGALSMDDDSDLMPILLPKARCDLGSYINSDTHGLGEKLR--------LVVDLARGIQHLHSMGLVHRDIKPGNVLVFESEEHGLHAKLADFGFTAEIGEMCPGGMGTSGAMAFETMSADPVLGAPAQDVVSVAVVLLMVCLKRERRCSNLFTQPVGAVQIENIDVNSPRTVPQELRTADETARLEVLLERARLGQDISHETKLLDFEMSRRTMADGSFMAW-LSPDKLDLTLESSEKLVGIFPSLL 1307
BLAST of mRNA_Ecto-sp9_F_contig1025.266.1 vs.
Match: Membrane-associated (tyrosine-and threonine-specific cdc2-inhibitory kinase (Myt1 kinase) n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL13_ECTSI) HSP 1 Score: 218 bits (556), Expect = 2.200e-56 Identity = 139/347 (40.06%), Postives = 179/347 (51.59%), Query Frame = 1
Query: 1240 GSIQELFVANSIEETGIAEMATTVKHVMGVVSHDRERLTVHRGLGQGKCGKVEEVEFADFPGECFALKTVAKGADEYTKHAALVEMMVFARLAGQPHDNVLGALAVDDSSPLMPMMMPKATDDLETRMNNDSFAIGDKLRQVLTAISVLVVDLARATEHLHGMNIVHRDIKPGNLLVFETEELGLHGKLADFGFAREIGESCPAMMGTPGYMAFESMSREPVAGAAGQDVVGVAMVLLMVCLRKELRSPNLYANMA-------------------LINSDEMTRLKELFQRMTLGEDISAEKELAQIDMTKRTMADGSFAAMMLSADKLDPALKSPEMLRESLPYFL 2223
GSI+ LF+AN E ++ + + + + + + LG G G+V++V +A PG+ FA+KTV + A + ALVEM VFARL VVDLAR H+H M +VHRDIKPGN+LVFE+EE GLH KLADFGFA EIGE CP MGT G MAFE+MS +PV GA QDVV VA+VLLMVCL++E R NL+ L +DE RL+ L +R LG+D+S E +L + ++++RTMADGSF A LS DK D L+S E L LP L
Sbjct: 657 GSIRRLFLANLAEVCASGQVQSFAVNALKTADMP---MVLAQPLGYGSFGRVDDVSYASLPGQSFAMKTVTQAASMSARFCALVEMTVFARL---------------------------------------------------------VVDLARGAHHMHSMGLVHRDIKPGNVLVFESEEHGLHAKLADFGFAAEIGERCPGGMGTSGAMAFETMSADPVLGAPAQDVVSVAVVLLMVCLKRERRCSNLFTQQLGYFAARQRVHRTCVGTRQELRTADETARLEVLLERTRLGQDVSHETKLLEFEVSRRTMADGSFVAW-LSPDKFDLTLESSEKLVGVLPSLL 942
BLAST of mRNA_Ecto-sp9_F_contig1025.266.1 vs.
Match: Tyrosine (kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL03_ECTSI) HSP 1 Score: 90.1 bits (222), Expect = 6.410e-15 Identity = 64/194 (32.99%), Postives = 91/194 (46.91%), Query Frame = 1
Query: 1240 GSIQELFVANSIEETGIAEMATTVKHVMGVVSHDRERLTVHRGLGQGKCGKVEEVEFADFPGECFALKTVAKGADEYTKHAALVEMMVFARLAGQPHDNVLGALAVDDSSPLMPMMMPKATDDLETRMNNDSFAIGDKLRQVLTAISVLVVDLARATEHLHGMNIVHRDIKPGNLLVFETEELGLHGKLADFGF 1821
GSI+ LF+AN E ++ + + + + + + LG G G+V++V +A PG+ FA+KT AG +V D S + P + R A+ + +T + LVVDLAR H+H M +VHRDIKPGN+LVFE+E GLH KLADFGF
Sbjct: 552 GSIRRLFLANLAEVCASGQVQSFAVNALKTADMP---MVLAQPLGYGSFGRVDDVSYASLPGQSFAMKT----------------------RAGLARRSVALETQSDHLSANTLQLGPNQAASMSARF----CALVE-----MTVFARLVVDLARGVHHMHSMGLVHRDIKPGNVLVFESEGHGLHAKLADFGF 711
BLAST of mRNA_Ecto-sp9_F_contig1025.266.1 vs.
Match: Putative (serine/threonine-protein kinase DCLK3 isoform X5 n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8KFU8_STIJA) HSP 1 Score: 77.8 bits (190), Expect = 8.680e-12 Identity = 76/235 (32.34%), Postives = 111/235 (47.23%), Query Frame = 1
Query: 1330 VSHDRERLTVHRGLGQGKCGKVEEVEFADF-------PGECFALKTVAKGADEYTKHAALVEMMVFARLAGQPH--DNVLGALAVDDSSPLMPMMMPKATDD-----LETRMNNDSF-AIGDKLRQVLTAISVLVVDLARATEHLHGMNIVHRDIKPGNLLVFETEELGLHGKLADFGFAREIGESCPAMMGTPGYMAFESMSREPVAGAAGQDVVGVAMVLLMVCLRKELRSPN 1989
+ DRE L +R LG+ KV + FAD GE FA+K V K ++L G+ +N + L D ++ + TDD ++ D F AI D ++ SV+V DLARA ++LH MN+VHRD+KP NLLV T++ + KLADFG A E+ + + GTP Y+A E ++ +GV +L+ C RSP+
Sbjct: 21 ICSDREVLERYR-LGE----KVGDGNFADVHAGVLRSTGEEFAIKKVDK-----------------SKLKGKESMIENEIAILKEIDHPNIVKLYEEFETDDYIYLIMDYIRGGDLFDAIIDSVKFTEADASVMVRDLARALDYLHKMNVVHRDMKPENLLVNLTDDSKMQLKLADFGLAMEVVKPVYTVCGTPTYVAPEILAETGYGLPVDMWALGVITYILL-CGFPPFRSPD 232
BLAST of mRNA_Ecto-sp9_F_contig1025.266.1 vs.
Match: Putative (serine/threonine-protein kinase DCLK3 isoform X5 n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8JHG1_STIJA) HSP 1 Score: 77.8 bits (190), Expect = 4.850e-11 Identity = 76/235 (32.34%), Postives = 111/235 (47.23%), Query Frame = 1
Query: 1330 VSHDRERLTVHRGLGQGKCGKVEEVEFADF-------PGECFALKTVAKGADEYTKHAALVEMMVFARLAGQPH--DNVLGALAVDDSSPLMPMMMPKATDD-----LETRMNNDSF-AIGDKLRQVLTAISVLVVDLARATEHLHGMNIVHRDIKPGNLLVFETEELGLHGKLADFGFAREIGESCPAMMGTPGYMAFESMSREPVAGAAGQDVVGVAMVLLMVCLRKELRSPN 1989
+ DRE L +R LG+ KV + FAD GE FA+K V K ++L G+ +N + L D ++ + TDD ++ D F AI D ++ SV+V DLARA ++LH MN+VHRD+KP NLLV T++ + KLADFG A E+ + + GTP Y+A E ++ +GV +L+ C RSP+
Sbjct: 537 ICSDREVLERYR-LGE----KVGDGNFADVHAGVLRSTGEEFAIKKVDK-----------------SKLKGKESMIENEIAILKEIDHPNIVKLYEEFETDDYIYLIMDYIRGGDLFDAIIDSVKFTEADASVMVRDLARALDYLHKMNVVHRDMKPENLLVNLTDDSKMQLKLADFGLAMEVVKPVYTVCGTPTYVAPEILAETGYGLPVDMWALGVITYILL-CGFPPFRSPD 748
BLAST of mRNA_Ecto-sp9_F_contig1025.266.1 vs.
Match: Serine/threonine-protein (kinase DCLK3 n=8 Tax=Mus TaxID=10088 RepID=DCLK3_MOUSE) HSP 1 Score: 75.1 bits (183), Expect = 3.270e-10 Identity = 62/223 (27.80%), Postives = 106/223 (47.53%), Query Frame = 1
Query: 1324 GVVSHDRER-LTVHRGLGQGKCGKVEEVEFADFPGECFALKTVAKGADEYTKHAALVEMMVFARLAGQPHDNVLGALAVDDSSPLMPMMMPKATDDLETRMNNDSF-AIGDKLRQVLTAISVLVVDLARATEHLHGMNIVHRDIKPGNLLVFETEELGLHGKLADFGFAREIGESCPAMMGTPGYMAFESMSREPVAGAAGQDVVGVAMVLLMVCLRKELRSP 1986
G++S D E+ + +G G V+E + + +A+K + K + + E+++ L+ H N++ V ++ + ++M E D F AI + ++ +V++ DL +A H+H NIVHRD+KP NLLV E+ + KLADFG A+ + + GTP Y+A E +S + GV + +L+ C RSP
Sbjct: 504 GIISADVEKHYDIGGVIGDGNFATVKECRHRETK-QAYAMKMIDKSQLKGKEDIVDSEILIIQSLS---HPNIVKLHEVYETEAEIYLIM-------EYVQGGDLFDAIVENVKFPEPEAAVMITDLCKALVHMHDKNIVHRDVKPENLLVQRNEDKSITLKLADFGLAKYVVRPIFTVCGTPTYVAPEILSEKGYGLEVDMWAAGVILYILL-CGFPPFRSP 714
BLAST of mRNA_Ecto-sp9_F_contig1025.266.1 vs.
Match: Uncharacterized (protein n=11 Tax=Muridae TaxID=10066 RepID=A0A8C6N2S7_MUSSI) HSP 1 Score: 75.1 bits (183), Expect = 4.890e-10 Identity = 62/223 (27.80%), Postives = 106/223 (47.53%), Query Frame = 1
Query: 1324 GVVSHDRER-LTVHRGLGQGKCGKVEEVEFADFPGECFALKTVAKGADEYTKHAALVEMMVFARLAGQPHDNVLGALAVDDSSPLMPMMMPKATDDLETRMNNDSF-AIGDKLRQVLTAISVLVVDLARATEHLHGMNIVHRDIKPGNLLVFETEELGLHGKLADFGFAREIGESCPAMMGTPGYMAFESMSREPVAGAAGQDVVGVAMVLLMVCLRKELRSP 1986
G++S D E+ + +G G V+E + + +A+K + K + + E+++ L+ H N++ V ++ + ++M E D F AI + ++ +V++ DL +A H+H NIVHRD+KP NLLV E+ + KLADFG A+ + + GTP Y+A E +S + GV + +L+ C RSP
Sbjct: 3465 GIISADVEKHYDIGGVIGDGNFATVKECRHRETK-QAYAMKMIDKSQLKGKEDIVDSEILIIQSLS---HPNIVKLHEVYETEAEIYLIM-------EYVQGGDLFDAIVENVKFPEPEAAVMITDLCKALVHMHDKNIVHRDVKPENLLVQRNEDKSITLKLADFGLAKYVVRPIFTVCGTPTYVAPEILSEKGYGLEVDMWAAGVILYILL-CGFPPFRSP 3675
BLAST of mRNA_Ecto-sp9_F_contig1025.266.1 vs.
Match: serine/threonine (protein kinase n=2 Tax=unclassified Diaminobutyricimonas TaxID=2643261 RepID=UPI001FB92FBE) HSP 1 Score: 72.8 bits (177), Expect = 7.470e-10 Identity = 65/218 (29.82%), Postives = 103/218 (47.25%), Query Frame = 1
Query: 1333 SHDRERLTVHRGLGQGKCGKVEEVEFADFPGECFALKT----VAKGADEYTKHAALVEMMVFARLAGQPHDNVLGAL-AVDDSSPLMPMMMPKATDDLETRMNNDSFAIGDKLRQVLTAISVLVVDLARATEHLHGMNIVHRDIKPGNLLVFE--TEELGLHGKLADFGFAREIG----ESCPAMMGTPGYMAFESMSREPVAGAAGQDVVGVAMVLL 1953
+H +R TV +G+G V E + +F G ALK VA+ AD + + LAG H ++ AV + ++ +M DL R+ R A+++L D+A A ++HG NI+HRD+KP N+L+ + G KLADFG A+ + S +++GT Y++ E EP++ A DV + +VLL
Sbjct: 12 AHFADRYTVTDVIGRGGMASVYEAD-DEFLGRTVALKVFHTDVAEAADVQRQTDEI------RLLAGLSHPCLVTVFDAVSEGDRIVLVMERVVGQDLRHRLAGGP-------RMDAEAVALLGADVADALAYVHGQNIIHRDVKPANILILDQWAATTGPRAKLADFGIAKIVDGSKLTSTGSVIGTANYLSPEQALGEPLSSAT--DVYSLGLVLL 213
BLAST of mRNA_Ecto-sp9_F_contig1025.266.1 vs.
Match: serine/threonine-protein (kinase DCLK1-like isoform X2 n=4 Tax=Salmonidae TaxID=8015 RepID=UPI00187832A2) HSP 1 Score: 71.6 bits (174), Expect = 1.970e-9 Identity = 72/237 (30.38%), Postives = 107/237 (45.15%), Query Frame = 1
Query: 1261 VANSIEETG--IAEMATTVK-HVMGVVSHDRERLTVHRGLGQGKCGKVEE-VEFADFPGECFALKTVAKGADEYTKHAALVEMMVFARLAGQPHDNVLGALAVDDSSPLMPMMMPKATDDLETRMNNDSF-AIGDKLRQVLTAISVLVVDLARATEHLHGMNIVHRDIKPGNLLVFETEELGLHGKLADFGFAREIGESCPAMMGTPGYMAFESMSREPVAGAAGQDVVGVAMVLLM 1956
V NS+ E G + E V+ + V ER V R LG G V E VE + G +ALK + KG + + E+ + R+ H N++ + D+ + ++M E D F AI R S ++ +LA A ++LH +NIVHRD+KP NLLV+E + KL DFG A + + GTP Y+A E ++ VGV +L+
Sbjct: 52 VCNSLAEGGGPVTESQPVVEDEIPAVPVSISERYRVGRTLGDGNFAVVRECVEHST--GREYALKIINKGRRQGKEQMIQNEVAILRRVK---HPNIVLLIEEMDTYSELYLVM-------ELVKGGDLFDAITSTNRYTERDASGMLYNLADAIKYLHSLNIVHRDVKPENLLVYEHADGSKSLKLGDFGLATVVDGPLYTVCGTPTYVAPEIIAETGYGLKVDIWAVGVIAYILL 276 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1025.266.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig1025.266.1 >prot_Ecto-sp9_F_contig1025.266.1 ID=prot_Ecto-sp9_F_contig1025.266.1|Name=mRNA_Ecto-sp9_F_contig1025.266.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=741bp LRFQRERLVTSVGSRWSIMSGMDPASTRWEQRTDTYLVSKSGGWRPAEGSback to top mRNA from alignment at Ecto-sp9_F_contig1025:7..6484- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig1025.266.1 ID=mRNA_Ecto-sp9_F_contig1025.266.1|Name=mRNA_Ecto-sp9_F_contig1025.266.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=6478bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1025:7..6484- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1025:7..6484- >mRNA_Ecto-sp9_F_contig1025.266.1 ID=mRNA_Ecto-sp9_F_contig1025.266.1|Name=mRNA_Ecto-sp9_F_contig1025.266.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=4446bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1025:7..6484- (Ectocarpus species9 EcSCA_722f female)back to top |