mRNA_Ecto-sp9_F_contig10249.265.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig10249.265.1 vs.
Match: Palmitoyltransferase (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS10_ECTSI) HSP 1 Score: 384 bits (986), Expect = 2.820e-134 Identity = 191/199 (95.98%), Postives = 191/199 (95.98%), Query Frame = 1
Query: 1 SAVWCNLDPCGLICAVITYGLVAYAQYAVTVCVVGQWLGRSFLGVIHVVAFNLLACLAHASHARAMLTDPGAVSCHALPPAAEVEAAGXXXXASGNGRDFAADSRRFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYVLVISVYALLLAVCRFCACLKNIGACQTSPAKDMAVVFLVVE 597
S VW NLDPCGLICAVITYGLVAYAQYAVTVCVVGQWLGRSF GVIHVVAFNLLACLAHASHARAMLTDPGAVSCHALPPAAEVEAAG ASGNGRDFAADSRRFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYVLVIS YALLLAVCRFCACLKNIGACQTSPAKDMAVVFLVVE
Sbjct: 12 SPVWGNLDPCGLICAVITYGLVAYAQYAVTVCVVGQWLGRSFFGVIHVVAFNLLACLAHASHARAMLTDPGAVSCHALPPAAEVEAAGGGG-ASGNGRDFAADSRRFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYVLVISAYALLLAVCRFCACLKNIGACQTSPAKDMAVVFLVVE 209
BLAST of mRNA_Ecto-sp9_F_contig10249.265.1 vs.
Match: Palmitoyltransferase (n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZE7_9PHAE) HSP 1 Score: 224 bits (572), Expect = 9.070e-70 Identity = 115/121 (95.04%), Postives = 115/121 (95.04%), Query Frame = 1
Query: 235 PPAAEVEAAGXXXXASGNGRDFAADSRRFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYVLVISVYALLLAVCRFCACLKNIGACQTSPAKDMAVVFLVVE 597
PPAAEVEAA XXXXASGNGRDFAADSRRFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYV VISVYALLLA RFCACLKNIGAC SPAKDMAVVFLVVE
Sbjct: 5 PPAAEVEAAXXXXXASGNGRDFAADSRRFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYVFVISVYALLLAGWRFCACLKNIGACHYSPAKDMAVVFLVVE 125
BLAST of mRNA_Ecto-sp9_F_contig10249.265.1 vs.
Match: Palmitoyltransferase (n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVR7_9STRA) HSP 1 Score: 199 bits (505), Expect = 1.790e-58 Identity = 113/224 (50.45%), Postives = 136/224 (60.71%), Query Frame = 1
Query: 10 WCNLDPCGLICAVITYGLVAYAQYAVTVCVVGQWLG-RSFLGVIHVVAFNLLACLAHASHARAMLTDPGAVSCHALPPA--AEVEAAGXXXXAS---------------------GNGRDFAADSRRFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYVLVISVYALLLAVCRFCACLKNIGACQTSPAKDMA----VVFLVVE 597
WCN DPCG++CA +T+ L+ YAQY + V+ W+G S G ++V AFN ACLA SH RAM TDPGAV +ALP A EV+A G + G G + A R+FCR+CNA+KP RAHHCSICRRCVVKMDHHCPWVNNCVGIGNHK F+ FI YV ++ YAL L + R+ C IG DMA VVFLV+E
Sbjct: 23 WCNQDPCGVVCAGVTWSLILYAQYTINKIVIFGWMGVLSLWGFLNVTAFNATACLAIISHVRAMTTDPGAVPRNALPLADDPEVQANGQEGTGTNGVAMDEGRLSGSHDGVLGNAGMGGNPRARVRKFCRRCNAFKPPRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKLFLLFIFYVFIMCTYALTLVLVRYAGC---IGEEDAEGCDDMAGNLLVVFLVME 243
BLAST of mRNA_Ecto-sp9_F_contig10249.265.1 vs.
Match: Palmitoyltransferase (n=2 Tax=Albugo TaxID=65356 RepID=F0W2S2_9STRA) HSP 1 Score: 192 bits (487), Expect = 3.560e-57 Identity = 99/197 (50.25%), Postives = 129/197 (65.48%), Query Frame = 1
Query: 7 VWCNLDPCGLICAVITYGLVAYAQYAVTVCVVGQWLGRSFLGVIHVVAFNLLACLAHASHARAMLTDPGAVSCHALPPAAEVEAAGXXXXASGNGRDFAADSRRFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYVLVISVYALLLAVCRFCACLKNIGACQTSPAKDMAVVFLVVE 597
VWCN DPCGLICAVI++ LV YA+ V V+ WL SFLG++++ +F ++A LA SH +AMLTDPGAV HA+P + R CR+C +KPVRAHHCSIC RCV+KMDHHCPW+NNCVG+GNHKFF+ FI YV ++S+YA++L R+ C+ N+ T + VVFLV+E
Sbjct: 15 VWCNTDPCGLICAVISWLLVLYAESIVVGVVLYPWLQFSFLGLLNMASFTVIAFLALVSHGKAMLTDPGAVPEHAIPAPLPITT-------KEEQERLEEQKYRTCRRCRQFKPVRAHHCSICERCVIKMDHHCPWINNCVGLGNHKFFLLFIFYVFLLSLYAMVLVCIRYAHCV-NVNCPSTGAIR---VVFLVLE 200
BLAST of mRNA_Ecto-sp9_F_contig10249.265.1 vs.
Match: Palmitoyltransferase (n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW89_9STRA) HSP 1 Score: 191 bits (485), Expect = 4.960e-57 Identity = 95/202 (47.03%), Postives = 132/202 (65.35%), Query Frame = 1
Query: 10 WCNLDPCGLICAVITYGLVAYAQYAVTVCVVGQWLGRSFLGVIHVVAFNLLACLAHASHARAMLTDPGAVSCHAL------PPAAEVEAAGXXXXASGNGRDFAADSRRFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYVLVISVYALLLAVCRFCACLKNIGACQTSPAKDMAVVFLVVE 597
WCNLDPCGLICA IT+ L+ YAQYAV ++ W SF+G + + + +A LA +H ++MLTDPGAV +A+ P E E +G + + RRFCR+C+AYKP RAHHCS+CRRC+VKMDHHCPW+NNCVG N KFF+QF+ Y ++ +++++L V RF C+ + C PA + ++FL+VE
Sbjct: 41 WCNLDPCGLICACITWFLILYAQYAVLRGILVPWFQWSFIGALIFLLYTAVAVLAIFAHLKSMLTDPGAVPRNAVSLDPEEPVTEETE---------NDGTNTSRRPRRFCRRCSAYKPPRAHHCSMCRRCIVKMDHHCPWINNCVGARNQKFFLQFVGYTFLLCMFSMVLVVARFSMCVGHADDCG-DPAGNFLIIFLIVE 232
BLAST of mRNA_Ecto-sp9_F_contig10249.265.1 vs.
Match: Palmitoyltransferase (n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKJ1_GLOUD) HSP 1 Score: 191 bits (485), Expect = 9.350e-57 Identity = 101/200 (50.50%), Postives = 131/200 (65.50%), Query Frame = 1
Query: 7 VWCNLDPCGLICAVITYGLVAYAQYAVTVCVVGQWLGRSFLGVIHVVAFNLLACLAHASHARAMLTDPGAVSCHALPPAAEVEAAGXXXXASGNGRDFAA---DSRRFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYVLVISVYALLLAVCRFCACLKNIGACQTSPAKDMAVVFLVVE 597
+WCN DPCGLICA +++ LV YA+ V V+ W+G S LG++++ AF ++ LA SH +AMLTDPGAV ALP A A + D A R CR+C +KP RAHHCSIC RCV+KMDHHCPWVNNCVG+GNHKFF+ FI YV ++S+YAL+L R+ C+ + C +S A + VVFLV+E
Sbjct: 21 LWCNKDPCGLICAALSWFLVLYAECVVVGVVIYPWMGLSLLGLVNIAAFTVICFLALVSHGKAMLTDPGAVPQSALPLA----------MADASKEDIARIEEQKYRTCRRCRQFKPGRAHHCSICDRCVIKMDHHCPWVNNCVGLGNHKFFLLFIFYVFILSLYALVLVSLRYARCIND--NCPSSGA--IRVVFLVLE 206
BLAST of mRNA_Ecto-sp9_F_contig10249.265.1 vs.
Match: Palmitoyltransferase (n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AV50_9STRA) HSP 1 Score: 184 bits (467), Expect = 8.430e-55 Identity = 87/179 (48.60%), Postives = 115/179 (64.25%), Query Frame = 1
Query: 1 SAVWCNLDPCGLICAVITYGLVAYAQYAVTVCVVGQWLGRSFLGVIHVVAFNLLACLAHASHARAMLTDPGAVSCHALPPAAEVEAAGXXXXASGNGRDFAADSRRFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYVLVISVYALLLAVCRFCACLKN 537
+ VWCN D CG++CAVI++ LV YA+Y V V+ W+G F G++H+ F + LA SH +AMLTDPG+V A+P A + + R CR+C +KP RAHHCSIC RCV+KMDHHCPWVNNCVG+GNHKFF+ FI YV V+++YAL L R+ C+ +
Sbjct: 18 AKVWCNWDACGIVCAVISWFLVLYAEYVVVGVVIYPWMGLGFFGLLHICLFTTVCFLALVSHGKAMLTDPGSVPEDAIPVALK------------HATKLEEQRFRTCRRCKIFKPARAHHCSICERCVIKMDHHCPWVNNCVGLGNHKFFLLFIFYVFVLAIYALSLVFTRYAHCIDD 184
BLAST of mRNA_Ecto-sp9_F_contig10249.265.1 vs.
Match: Palmitoyltransferase (n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZXN1_9STRA) HSP 1 Score: 185 bits (470), Expect = 1.630e-54 Identity = 93/194 (47.94%), Postives = 121/194 (62.37%), Query Frame = 1
Query: 1 SAVWCNLDPCGLICAVITYGLVAYAQYAVTVCVVGQWLGRSFLGVIHVVAFNLLACLAHASHARAMLTDPGAVSCHALP------PAAEVEAAGXXXXASGNGRDFAADSRRFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYVLVISVYALLLAVCRFCACLKNIGACQTSPA 564
S++W N D CGL+CA I++ L+AYA+Y V V+ W+G SF GV+H F+LL LA SH +AM+TDPG+V A+P P E+ R CR+C YKP RAHHCSIC RCVVKMDHHCPWVNNCVG+GNHKFF+ F+ YV +++ YA++L V R+ C+ C T+ A
Sbjct: 20 SSIWLNWDCCGLVCAAISWFLIAYAEYVVVGIVLFPWMGTSFFGVLHTCIFSLLCFLALVSHGKAMMTDPGSVPDDAIPIPLKYAPREELNR-------------LEEQRYRTCRRCKIYKPARAHHCSICERCVVKMDHHCPWVNNCVGLGNHKFFLLFVFYVFLLATYAMVLVVIRYSHCMNE--TCATTGA 198
BLAST of mRNA_Ecto-sp9_F_contig10249.265.1 vs.
Match: Palmitoyltransferase (n=6 Tax=Peronosporaceae TaxID=4777 RepID=G4YWS3_PHYSP) HSP 1 Score: 185 bits (470), Expect = 1.710e-54 Identity = 103/198 (52.02%), Postives = 129/198 (65.15%), Query Frame = 1
Query: 7 VWCNLDPCGLICAVITYGLVAYAQYAVTVCVVGQWLGRSFLGVIHVVAFNLLACLAHASHARAMLTDPGAVSCHALPPAAEVEAAGXXXXASGNGRDFAADSR-RFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYVLVISVYALLLAVCRFCACLKNIGACQTSPAKDMAVVFLVVE 597
+WCN DPCG++CAVI++ LV YA+ V VV W+G S LG++H+V F+ L LA SH +AMLTDPGAV ALP A AS + + R R CR+C +KP RAHHCSIC RCV+KMDHHCPWVNNCVG+GNHKFF+ FI YV V+S YAL L R+ C+ +C T A + VV L++E
Sbjct: 21 LWCNKDPCGVVCAVISWFLVLYAECTVVGVVVYPWMGLSPLGLLHIVIFSGLCFLALVSHGKAMLTDPGAVPESALPVA--------LAHASKDEIARMEEQRYRTCRRCRQFKPGRAHHCSICDRCVIKMDHHCPWVNNCVGLGNHKFFLLFIFYVFVLSAYALTLVFFRYAKCINE--SCPTYGA--IRVVCLILE 206
BLAST of mRNA_Ecto-sp9_F_contig10249.265.1 vs.
Match: Palmitoyltransferase (n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X9G3_9STRA) HSP 1 Score: 181 bits (459), Expect = 2.410e-54 Identity = 94/181 (51.93%), Postives = 118/181 (65.19%), Query Frame = 1
Query: 1 SAVWCNLDPCGLICAVITYGLVAYAQYAVTVCVVGQWLGRSFLGVIHVVAFNLLACLAHASHARAMLTDPGAVSCHALPPAAEVEAAGXXXXASGNGRDFAADSRRF--CRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYVLVISVYALLLAVCRFCACLKN 537
+ +WCN DPCGL+CAVI++ LV YA+ V V+ W+G S LG++H F L LA SH +AMLTDPGAV ALP A + A A F + +R+ CR+C +KP RAHHCSIC RCV+KMDHHCPWVNNCVG+GNHKFF+ FI YV ++S YAL L R+ C+
Sbjct: 19 ARLWCNKDPCGLVCAVISWFLVLYAECTVVGVVIYPWMGLSPLGLLHTAIFTGLCFLALVSHGKAMLTDPGAVPESALPLA--LANASKDEIAR-----FVMEEQRYRTCRRCRQFKPGRAHHCSICDRCVIKMDHHCPWVNNCVGLGNHKFFLLFIFYVFLLSTYALTLVFLRYAKCINE 192 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10249.265.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig10249.265.1 >prot_Ecto-sp9_F_contig10249.265.1 ID=prot_Ecto-sp9_F_contig10249.265.1|Name=mRNA_Ecto-sp9_F_contig10249.265.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=199bp SAVWCNLDPCGLICAVITYGLVAYAQYAVTVCVVGQWLGRSFLGVIHVVAback to top mRNA from alignment at Ecto-sp9_F_contig10249:96..2955+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig10249.265.1 ID=mRNA_Ecto-sp9_F_contig10249.265.1|Name=mRNA_Ecto-sp9_F_contig10249.265.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=2860bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10249:96..2955+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10249:96..2955+ >mRNA_Ecto-sp9_F_contig10249.265.1 ID=mRNA_Ecto-sp9_F_contig10249.265.1|Name=mRNA_Ecto-sp9_F_contig10249.265.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1194bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10249:96..2955+ (Ectocarpus species9 EcSCA_722f female)back to top |