mRNA_Ecto-sp9_F_contig10249.265.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig10249.265.1
Unique NamemRNA_Ecto-sp9_F_contig10249.265.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig10249.265.1 vs.
Match: Palmitoyltransferase (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS10_ECTSI)

HSP 1 Score: 384 bits (986), Expect = 2.820e-134
Identity = 191/199 (95.98%), Postives = 191/199 (95.98%), Query Frame = 1
Query:    1 SAVWCNLDPCGLICAVITYGLVAYAQYAVTVCVVGQWLGRSFLGVIHVVAFNLLACLAHASHARAMLTDPGAVSCHALPPAAEVEAAGXXXXASGNGRDFAADSRRFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYVLVISVYALLLAVCRFCACLKNIGACQTSPAKDMAVVFLVVE 597
            S VW NLDPCGLICAVITYGLVAYAQYAVTVCVVGQWLGRSF GVIHVVAFNLLACLAHASHARAMLTDPGAVSCHALPPAAEVEAAG    ASGNGRDFAADSRRFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYVLVIS YALLLAVCRFCACLKNIGACQTSPAKDMAVVFLVVE
Sbjct:   12 SPVWGNLDPCGLICAVITYGLVAYAQYAVTVCVVGQWLGRSFFGVIHVVAFNLLACLAHASHARAMLTDPGAVSCHALPPAAEVEAAGGGG-ASGNGRDFAADSRRFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYVLVISAYALLLAVCRFCACLKNIGACQTSPAKDMAVVFLVVE 209          
BLAST of mRNA_Ecto-sp9_F_contig10249.265.1 vs.
Match: Palmitoyltransferase (n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZE7_9PHAE)

HSP 1 Score: 224 bits (572), Expect = 9.070e-70
Identity = 115/121 (95.04%), Postives = 115/121 (95.04%), Query Frame = 1
Query:  235 PPAAEVEAAGXXXXASGNGRDFAADSRRFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYVLVISVYALLLAVCRFCACLKNIGACQTSPAKDMAVVFLVVE 597
            PPAAEVEAA XXXXASGNGRDFAADSRRFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYV VISVYALLLA  RFCACLKNIGAC  SPAKDMAVVFLVVE
Sbjct:    5 PPAAEVEAAXXXXXASGNGRDFAADSRRFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYVFVISVYALLLAGWRFCACLKNIGACHYSPAKDMAVVFLVVE 125          
BLAST of mRNA_Ecto-sp9_F_contig10249.265.1 vs.
Match: Palmitoyltransferase (n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVR7_9STRA)

HSP 1 Score: 199 bits (505), Expect = 1.790e-58
Identity = 113/224 (50.45%), Postives = 136/224 (60.71%), Query Frame = 1
Query:   10 WCNLDPCGLICAVITYGLVAYAQYAVTVCVVGQWLG-RSFLGVIHVVAFNLLACLAHASHARAMLTDPGAVSCHALPPA--AEVEAAGXXXXAS---------------------GNGRDFAADSRRFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYVLVISVYALLLAVCRFCACLKNIGACQTSPAKDMA----VVFLVVE 597
            WCN DPCG++CA +T+ L+ YAQY +   V+  W+G  S  G ++V AFN  ACLA  SH RAM TDPGAV  +ALP A   EV+A G     +                     G G +  A  R+FCR+CNA+KP RAHHCSICRRCVVKMDHHCPWVNNCVGIGNHK F+ FI YV ++  YAL L + R+  C   IG        DMA    VVFLV+E
Sbjct:   23 WCNQDPCGVVCAGVTWSLILYAQYTINKIVIFGWMGVLSLWGFLNVTAFNATACLAIISHVRAMTTDPGAVPRNALPLADDPEVQANGQEGTGTNGVAMDEGRLSGSHDGVLGNAGMGGNPRARVRKFCRRCNAFKPPRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKLFLLFIFYVFIMCTYALTLVLVRYAGC---IGEEDAEGCDDMAGNLLVVFLVME 243          
BLAST of mRNA_Ecto-sp9_F_contig10249.265.1 vs.
Match: Palmitoyltransferase (n=2 Tax=Albugo TaxID=65356 RepID=F0W2S2_9STRA)

HSP 1 Score: 192 bits (487), Expect = 3.560e-57
Identity = 99/197 (50.25%), Postives = 129/197 (65.48%), Query Frame = 1
Query:    7 VWCNLDPCGLICAVITYGLVAYAQYAVTVCVVGQWLGRSFLGVIHVVAFNLLACLAHASHARAMLTDPGAVSCHALPPAAEVEAAGXXXXASGNGRDFAADSRRFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYVLVISVYALLLAVCRFCACLKNIGACQTSPAKDMAVVFLVVE 597
            VWCN DPCGLICAVI++ LV YA+  V   V+  WL  SFLG++++ +F ++A LA  SH +AMLTDPGAV  HA+P    +                     R CR+C  +KPVRAHHCSIC RCV+KMDHHCPW+NNCVG+GNHKFF+ FI YV ++S+YA++L   R+  C+ N+    T   +   VVFLV+E
Sbjct:   15 VWCNTDPCGLICAVISWLLVLYAESIVVGVVLYPWLQFSFLGLLNMASFTVIAFLALVSHGKAMLTDPGAVPEHAIPAPLPITT-------KEEQERLEEQKYRTCRRCRQFKPVRAHHCSICERCVIKMDHHCPWINNCVGLGNHKFFLLFIFYVFLLSLYAMVLVCIRYAHCV-NVNCPSTGAIR---VVFLVLE 200          
BLAST of mRNA_Ecto-sp9_F_contig10249.265.1 vs.
Match: Palmitoyltransferase (n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW89_9STRA)

HSP 1 Score: 191 bits (485), Expect = 4.960e-57
Identity = 95/202 (47.03%), Postives = 132/202 (65.35%), Query Frame = 1
Query:   10 WCNLDPCGLICAVITYGLVAYAQYAVTVCVVGQWLGRSFLGVIHVVAFNLLACLAHASHARAMLTDPGAVSCHAL------PPAAEVEAAGXXXXASGNGRDFAADSRRFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYVLVISVYALLLAVCRFCACLKNIGACQTSPAKDMAVVFLVVE 597
            WCNLDPCGLICA IT+ L+ YAQYAV   ++  W   SF+G +  + +  +A LA  +H ++MLTDPGAV  +A+      P   E E          +G + +   RRFCR+C+AYKP RAHHCS+CRRC+VKMDHHCPW+NNCVG  N KFF+QF+ Y  ++ +++++L V RF  C+ +   C   PA +  ++FL+VE
Sbjct:   41 WCNLDPCGLICACITWFLILYAQYAVLRGILVPWFQWSFIGALIFLLYTAVAVLAIFAHLKSMLTDPGAVPRNAVSLDPEEPVTEETE---------NDGTNTSRRPRRFCRRCSAYKPPRAHHCSMCRRCIVKMDHHCPWINNCVGARNQKFFLQFVGYTFLLCMFSMVLVVARFSMCVGHADDCG-DPAGNFLIIFLIVE 232          
BLAST of mRNA_Ecto-sp9_F_contig10249.265.1 vs.
Match: Palmitoyltransferase (n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKJ1_GLOUD)

HSP 1 Score: 191 bits (485), Expect = 9.350e-57
Identity = 101/200 (50.50%), Postives = 131/200 (65.50%), Query Frame = 1
Query:    7 VWCNLDPCGLICAVITYGLVAYAQYAVTVCVVGQWLGRSFLGVIHVVAFNLLACLAHASHARAMLTDPGAVSCHALPPAAEVEAAGXXXXASGNGRDFAA---DSRRFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYVLVISVYALLLAVCRFCACLKNIGACQTSPAKDMAVVFLVVE 597
            +WCN DPCGLICA +++ LV YA+  V   V+  W+G S LG++++ AF ++  LA  SH +AMLTDPGAV   ALP A           A  +  D A       R CR+C  +KP RAHHCSIC RCV+KMDHHCPWVNNCVG+GNHKFF+ FI YV ++S+YAL+L   R+  C+ +   C +S A  + VVFLV+E
Sbjct:   21 LWCNKDPCGLICAALSWFLVLYAECVVVGVVIYPWMGLSLLGLVNIAAFTVICFLALVSHGKAMLTDPGAVPQSALPLA----------MADASKEDIARIEEQKYRTCRRCRQFKPGRAHHCSICDRCVIKMDHHCPWVNNCVGLGNHKFFLLFIFYVFILSLYALVLVSLRYARCIND--NCPSSGA--IRVVFLVLE 206          
BLAST of mRNA_Ecto-sp9_F_contig10249.265.1 vs.
Match: Palmitoyltransferase (n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AV50_9STRA)

HSP 1 Score: 184 bits (467), Expect = 8.430e-55
Identity = 87/179 (48.60%), Postives = 115/179 (64.25%), Query Frame = 1
Query:    1 SAVWCNLDPCGLICAVITYGLVAYAQYAVTVCVVGQWLGRSFLGVIHVVAFNLLACLAHASHARAMLTDPGAVSCHALPPAAEVEAAGXXXXASGNGRDFAADSRRFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYVLVISVYALLLAVCRFCACLKN 537
            + VWCN D CG++CAVI++ LV YA+Y V   V+  W+G  F G++H+  F  +  LA  SH +AMLTDPG+V   A+P A +            +         R CR+C  +KP RAHHCSIC RCV+KMDHHCPWVNNCVG+GNHKFF+ FI YV V+++YAL L   R+  C+ +
Sbjct:   18 AKVWCNWDACGIVCAVISWFLVLYAEYVVVGVVIYPWMGLGFFGLLHICLFTTVCFLALVSHGKAMLTDPGSVPEDAIPVALK------------HATKLEEQRFRTCRRCKIFKPARAHHCSICERCVIKMDHHCPWVNNCVGLGNHKFFLLFIFYVFVLAIYALSLVFTRYAHCIDD 184          
BLAST of mRNA_Ecto-sp9_F_contig10249.265.1 vs.
Match: Palmitoyltransferase (n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZXN1_9STRA)

HSP 1 Score: 185 bits (470), Expect = 1.630e-54
Identity = 93/194 (47.94%), Postives = 121/194 (62.37%), Query Frame = 1
Query:    1 SAVWCNLDPCGLICAVITYGLVAYAQYAVTVCVVGQWLGRSFLGVIHVVAFNLLACLAHASHARAMLTDPGAVSCHALP------PAAEVEAAGXXXXASGNGRDFAADSRRFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYVLVISVYALLLAVCRFCACLKNIGACQTSPA 564
            S++W N D CGL+CA I++ L+AYA+Y V   V+  W+G SF GV+H   F+LL  LA  SH +AM+TDPG+V   A+P      P  E+                     R CR+C  YKP RAHHCSIC RCVVKMDHHCPWVNNCVG+GNHKFF+ F+ YV +++ YA++L V R+  C+     C T+ A
Sbjct:   20 SSIWLNWDCCGLVCAAISWFLIAYAEYVVVGIVLFPWMGTSFFGVLHTCIFSLLCFLALVSHGKAMMTDPGSVPDDAIPIPLKYAPREELNR-------------LEEQRYRTCRRCKIYKPARAHHCSICERCVVKMDHHCPWVNNCVGLGNHKFFLLFVFYVFLLATYAMVLVVIRYSHCMNE--TCATTGA 198          
BLAST of mRNA_Ecto-sp9_F_contig10249.265.1 vs.
Match: Palmitoyltransferase (n=6 Tax=Peronosporaceae TaxID=4777 RepID=G4YWS3_PHYSP)

HSP 1 Score: 185 bits (470), Expect = 1.710e-54
Identity = 103/198 (52.02%), Postives = 129/198 (65.15%), Query Frame = 1
Query:    7 VWCNLDPCGLICAVITYGLVAYAQYAVTVCVVGQWLGRSFLGVIHVVAFNLLACLAHASHARAMLTDPGAVSCHALPPAAEVEAAGXXXXASGNGRDFAADSR-RFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYVLVISVYALLLAVCRFCACLKNIGACQTSPAKDMAVVFLVVE 597
            +WCN DPCG++CAVI++ LV YA+  V   VV  W+G S LG++H+V F+ L  LA  SH +AMLTDPGAV   ALP A           AS +      + R R CR+C  +KP RAHHCSIC RCV+KMDHHCPWVNNCVG+GNHKFF+ FI YV V+S YAL L   R+  C+    +C T  A  + VV L++E
Sbjct:   21 LWCNKDPCGVVCAVISWFLVLYAECTVVGVVVYPWMGLSPLGLLHIVIFSGLCFLALVSHGKAMLTDPGAVPESALPVA--------LAHASKDEIARMEEQRYRTCRRCRQFKPGRAHHCSICDRCVIKMDHHCPWVNNCVGLGNHKFFLLFIFYVFVLSAYALTLVFFRYAKCINE--SCPTYGA--IRVVCLILE 206          
BLAST of mRNA_Ecto-sp9_F_contig10249.265.1 vs.
Match: Palmitoyltransferase (n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X9G3_9STRA)

HSP 1 Score: 181 bits (459), Expect = 2.410e-54
Identity = 94/181 (51.93%), Postives = 118/181 (65.19%), Query Frame = 1
Query:    1 SAVWCNLDPCGLICAVITYGLVAYAQYAVTVCVVGQWLGRSFLGVIHVVAFNLLACLAHASHARAMLTDPGAVSCHALPPAAEVEAAGXXXXASGNGRDFAADSRRF--CRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKFFIQFISYVLVISVYALLLAVCRFCACLKN 537
            + +WCN DPCGL+CAVI++ LV YA+  V   V+  W+G S LG++H   F  L  LA  SH +AMLTDPGAV   ALP A  +  A     A      F  + +R+  CR+C  +KP RAHHCSIC RCV+KMDHHCPWVNNCVG+GNHKFF+ FI YV ++S YAL L   R+  C+  
Sbjct:   19 ARLWCNKDPCGLVCAVISWFLVLYAECTVVGVVIYPWMGLSPLGLLHTAIFTGLCFLALVSHGKAMLTDPGAVPESALPLA--LANASKDEIAR-----FVMEEQRYRTCRRCRQFKPGRAHHCSICDRCVIKMDHHCPWVNNCVGLGNHKFFLLFIFYVFLLSTYALTLVFLRYAKCINE 192          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10249.265.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Palmitoyltransferase2.820e-13495.98n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8... [more]
Palmitoyltransferase9.070e-7095.04n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 R... [more]
Palmitoyltransferase1.790e-5850.45n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVR7_... [more]
Palmitoyltransferase3.560e-5750.25n=2 Tax=Albugo TaxID=65356 RepID=F0W2S2_9STRA[more]
Palmitoyltransferase4.960e-5747.03n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7... [more]
Palmitoyltransferase9.350e-5750.50n=1 Tax=Globisporangium ultimum (strain ATCC 20000... [more]
Palmitoyltransferase8.430e-5548.60n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0... [more]
Palmitoyltransferase1.630e-5447.94n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0... [more]
Palmitoyltransferase1.710e-5452.02n=6 Tax=Peronosporaceae TaxID=4777 RepID=G4YWS3_PH... [more]
Palmitoyltransferase2.410e-5451.93n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10249contigEcto-sp9_F_contig10249:96..2955 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score385.2
Seed ortholog evalue1.9e-104
Seed eggNOG ortholog2880.D8LS10
Preferred nameZDHHC21
KEGG koko:K18932,ko:K20028,ko:K20029
KEGG TC9.B.37.2
GOsGO:0000139,GO:0001750,GO:0001942,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005794,GO:0005886,GO:0005929,GO:0006464,GO:0006497,GO:0006605,GO:0006807,GO:0006810,GO:0006886,GO:0007275,GO:0008104,GO:0008150,GO:0008152,GO:0008544,GO:0009058,GO:0009059,GO:0009888,GO:0009987,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016409,GO:0016417,GO:0016740,GO:0016746,GO:0016747,GO:0018193,GO:0018198,GO:0018230,GO:0018231,GO:0018345,GO:0019222,GO:0019538,GO:0019706,GO:0019707,GO:0022404,GO:0022405,GO:0031090,GO:0031253,GO:0031984,GO:0032501,GO:0032502,GO:0032768,GO:0033036,GO:0033365,GO:0034613,GO:0034645,GO:0036211,GO:0042157,GO:0042158,GO:0042303,GO:0042622,GO:0042633,GO:0042886,GO:0042995,GO:0043005,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043543,GO:0043588,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044441,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0045184,GO:0046907,GO:0048513,GO:0048731,GO:0048732,GO:0048733,GO:0048856,GO:0050789,GO:0050790,GO:0050999,GO:0051179,GO:0051234,GO:0051341,GO:0051641,GO:0051649,GO:0051668,GO:0060170,GO:0060429,GO:0061512,GO:0065007,GO:0065009,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0097458,GO:0097499,GO:0097730,GO:0097731,GO:0097733,GO:0098588,GO:0098590,GO:0098773,GO:0098791,GO:0120025,GO:0120038,GO:0140096,GO:1901564,GO:1901566,GO:1901576,GO:1903546
EggNOG free text desc.protein-cysteine S-palmitoyltransferase activity
EggNOG OGsCOG5273@1,KOG1311@2759
EC2.3.1.225
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko04131
Hectar predicted targeting categorysignal anchor
Exons3
Model size597
Cds size597
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10249.265.1prot_Ecto-sp9_F_contig10249.265.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig10249 96..2955 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928220.8513827-CDS-Ecto-sp9_F_contig10249:95..3291622928220.8513827-CDS-Ecto-sp9_F_contig10249:95..329Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10249 96..329 +
1692277800.748871-CDS-Ecto-sp9_F_contig10249:95..3291692277800.748871-CDS-Ecto-sp9_F_contig10249:95..329Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10249 96..329 +
1622928220.8677433-CDS-Ecto-sp9_F_contig10249:1142..13011622928220.8677433-CDS-Ecto-sp9_F_contig10249:1142..1301Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10249 1143..1301 +
1692277800.7599874-CDS-Ecto-sp9_F_contig10249:1142..13011692277800.7599874-CDS-Ecto-sp9_F_contig10249:1142..1301Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10249 1143..1301 +
1622928220.8832428-CDS-Ecto-sp9_F_contig10249:2751..29551622928220.8832428-CDS-Ecto-sp9_F_contig10249:2751..2955Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10249 2752..2955 +
1692277800.7682273-CDS-Ecto-sp9_F_contig10249:2751..29551692277800.7682273-CDS-Ecto-sp9_F_contig10249:2751..2955Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10249 2752..2955 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig10249.265.1

>prot_Ecto-sp9_F_contig10249.265.1 ID=prot_Ecto-sp9_F_contig10249.265.1|Name=mRNA_Ecto-sp9_F_contig10249.265.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=199bp
SAVWCNLDPCGLICAVITYGLVAYAQYAVTVCVVGQWLGRSFLGVIHVVA
FNLLACLAHASHARAMLTDPGAVSCHALPPAAEVEAAGGGGGASGNGRDF
AADSRRFCRKCNAYKPVRAHHCSICRRCVVKMDHHCPWVNNCVGIGNHKF
FIQFISYVLVISVYALLLAVCRFCACLKNIGACQTSPAKDMAVVFLVVE
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mRNA from alignment at Ecto-sp9_F_contig10249:96..2955+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig10249.265.1 ID=mRNA_Ecto-sp9_F_contig10249.265.1|Name=mRNA_Ecto-sp9_F_contig10249.265.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=2860bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10249:96..2955+ (Ectocarpus species9 EcSCA_722f female)
TCCGCAGTCTGGTGTAACCTGGACCCGTGCGGCCTGATCTGCGCCGTCAT CACGTACGGCCTCGTGGCCTACGCCCAGTACGCGGTGACGGTGTGCGTGG TCGGGCAGTGGCTGGGGCGATCCTTCCTCGGGGTGATCCACGTGGTGGCC TTTAACCTGCTCGCTTGCCTCGCCCACGCTTCGCACGCGAGGGCCATGCT GACGGATCCGGGAGCCGTGTCGTGCCACGCCTTGGTGAGAAAAAAAAAAA AAATGGTACTTCTGTATGGCTTCTCAGAGAGTCGTAGAAACACTGGTTAT TTGTTGGTATGAAGCTAAGGAGTTTAGTTGCTAGTTGTCCCTGACTTTCA TATGTGGATGGAGATGAATTCGTTGTATAGCAAGAAATGATGTTGCTGCA TGCTACTCGTAGAGACACAGGTCAGTCATGGTATAACGCTATGAGTTCAT AGCTAATTTATGCCGGACTCTTCCTTATCGGTGGATGGAGATGAATTCAC TGTGTTTTTGCATGAACAAAATATTGCAGTGAAGTCAGGCCAGCGGCGAG GGGATAATCAAGTACGGCGAGCCTCGTTCTCGTTACACACAGGGCCGACA TGGTAGAAAGCGATACTTACTGCTGTTGTTGGTGGTTTGTCCGCGTCGAG TATGTTGGACATGAGCATCTCCGGGAACTGTATCGAGTACACACGCTCTT ATTAATTGTGTGGTGTACCGGCATTCGTGGGCGCAGTGTAGGTACGCACA TCTGTCGAGAGGAACGGTCGAGCTCGACCCGGCCGGGCAAGCGGGCGCGC AGAAATTATTCCGTGCTGTCACAGGGCCCGGCGCACTGCTTCGACAGAAC TATTCGGCGTGATGTTCAAAACACACTTGAATGAGGTCAATGGTATAACG AGTACGGCATGCACAACTATGAGTGCACCCCCCCCCCCGCCCCCCCCTTG CCCACGCCCACGCCGTTCCGCACGTGATGATGTCCCATATCAATAATTTT GTTGTGCGCCTTTTTTCTTTTTGTACCTCTTTTTGTCTTGATGGCAGCCG CCAGCTGCCGAGGTGGAGGCGGCGGGCGGCGGCGGCGGCGCAAGCGGCAA CGGAAGAGACTTCGCAGCGGACTCGCGACGGTTCTGCCGCAAGTGCAACG CGTACAAGCCCGTGCGCGCGCACCACTGCTCGATCTGCCGCCGATGCGTC GTCAAGGTATTTATGATTTGAAGTGGTATCACTCTGTTCGGAATTTATAC TCCGTTCGGATACTCACAAATTGTGATTGTTCCAATTCTCCCTATATTTC CATACAGAAGAGTGGTAGTTTCTTCGTATTGCTGGTGTTGTGGGAGCGTT GTTTTGAATGGCATCGTTGGTACTGCTGCTGCTGTGTGAGCGTTATAATA CATGGGATATATATTGGAAGGGGGTCAGGATGGGCCATCTGTTTTGTTTT CTGTGTTGGGGAAAGGCGCTCCCGGAAGGGCTTCTGATGACAACGGCTGT GCTTTCGGGGTGCGTCCCGACTGACTCGCCCCGCCTTCAGGCGTTAGAGG CCAAATACACACCAAACACCAGGCATAGTTGAAGGTCCTATTTGTGTCGC GAATGTATTTTGTTCCAAACAGGCACTGTCCGCTTTCCTGTTATTCGTTG ATGGCCAAGCATACACCAGGCAGGGTTTTATTTTTTTGTGCCTTATGTTT CGGGAACGCCTTGTTGTTCCAGTCAGGTTCTGTTTCTCTTTCGTGTTTTC GACGGCCACGTGTTGAGCCTGTTTCGCAACTTTAGTCGGTGTTCCTGTGC AGCAGCGGGGGTTGACTGCCGTGTGCGTTGGAAGGTCTTGTTTACGCCTC CCGTTGCTGTCATGTAGTAGGAAGACTATAATACCCATTCGAGATATACC CACAGTCGAACGGGATGTGTTTGGAGTATTGTCAGTGAGTATGCTTAACG CTTAACCGCGCCGGGTTTTGCGAACTACGATGTACTGATGTGGTAGTCTT GGATGGAATTTTTGTTGTTCCGCTTCTTGCGATCGCTTGTGGTGATTTCG ACCACATGTTGTTGCGCGCCTTGTGAACAGCCTGTGGTTAACGCTTCGCC TGCCCCACCTGCGCACTACGGTGCAACCTACCCTACTCTGTCACTACCAT GGCGTTCTCCGTGCCGTTTTTAGAAAGTACACATAATCTCACAGAAAGAC CACCCGTTCTAGACAGTACTGTACCATAGTCGAAGGATGTTTATACCTCC TCTGCAGAATATACGTGGATGCTACACGGGTCTCGATCGTCGCCCGTCGG TTTTGTGGAATTACTTGTCTGTAGTGTTGCGTCTGGCCGCCTGTTCCTTG TAGATGCGGCGATTTGTTTCTTGTGTCTCTCTTATCGTCTGTATCTTTTG CGGTCTGTATTCGTCTCTCTCTTTGCCTATCTACCTGTCTATGGGGTGCT TACTGTTTAGGCACCTCTTTGTTTGATCTTTCTTTCTCTCCCTCCCTCTC TCTCTCTCTCGCTTGGTCGCTATTTAGCTGCATGTTGTCTTAACTTCCTG TCTTGTATCTCGTTGTCTGCTCTCTTTGCCCCAACCTTCTCTCTTTCTCC CTATCTCCCTGTTCCCCCTTCCGCCACACTCCGCCGCTCGCCCGATACGC CACCAGATGGACCACCATTGCCCGTGGGTAAACAACTGCGTCGGCATCGG CAACCACAAGTTCTTCATCCAGTTCATTTCGTACGTGTTGGTCATCTCCG TGTACGCCCTGCTGCTGGCGGTGTGCCGGTTCTGCGCGTGCCTCAAGAAC ATTGGCGCTTGCCAAACCTCCCCGGCGAAGGACATGGCGGTGGTGTTTTT GGTGGTGGAG
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10249:96..2955+

>mRNA_Ecto-sp9_F_contig10249.265.1 ID=mRNA_Ecto-sp9_F_contig10249.265.1|Name=mRNA_Ecto-sp9_F_contig10249.265.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1194bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10249:96..2955+ (Ectocarpus species9 EcSCA_722f female)
TCCGCAGTCTGGTGTAACCTGGACCCGTGCGGCCTGATCTGCGCCGTCAT
CACGTACGGCCTCGTGGCCTACGCCCAGTACGCGGTGACGGTGTGCGTGG
TCGGGCAGTGGCTGGGGCGATCCTTCCTCGGGGTGATCCACGTGGTGGCC
TTTAACCTGCTCGCTTGCCTCGCCCACGCTTCGCACGCGAGGGCCATGCT
GACGGATCCGGGAGCCGTGTCGTGCCACGCCTTGTCCGCAGTCTGGTGTA
ACCTGGACCCGTGCGGCCTGATCTGCGCCGTCATCACGTACGGCCTCGTG
GCCTACGCCCAGTACGCGGTGACGGTGTGCGTGGTCGGGCAGTGGCTGGG
GCGATCCTTCCTCGGGGTGATCCACGTGGTGGCCTTTAACCTGCTCGCTT
GCCTCGCCCACGCTTCGCACGCGAGGGCCATGCTGACGGATCCGGGAGCC
GTGTCGTGCCACGCCTTGCCGCCAGCTGCCGAGGTGGAGGCGGCGGGCGG
CGGCGGCGGCGCAAGCGGCAACGGAAGAGACTTCGCAGCGGACTCGCGAC
GGTTCTGCCGCAAGTGCAACGCGTACAAGCCCGTGCGCGCGCACCACTGC
TCGATCTGCCGCCGATGCGTCGTCAAGCCGCCAGCTGCCGAGGTGGAGGC
GGCGGGCGGCGGCGGCGGCGCAAGCGGCAACGGAAGAGACTTCGCAGCGG
ACTCGCGACGGTTCTGCCGCAAGTGCAACGCGTACAAGCCCGTGCGCGCG
CACCACTGCTCGATCTGCCGCCGATGCGTCGTCAAGATGGACCACCATTG
CCCGTGGGTAAACAACTGCGTCGGCATCGGCAACCACAAGTTCTTCATCC
AGTTCATTTCGTACGTGTTGGTCATCTCCGTGTACGCCCTGCTGCTGGCG
GTGTGCCGGTTCTGCGCGTGCCTCAAGAACATTGGCGCTTGCCAAACCTC
CCCGGCGAAGGACATGGCGGTGGTGTTTTTGGTGGTGGAGATGGACCACC
ATTGCCCGTGGGTAAACAACTGCGTCGGCATCGGCAACCACAAGTTCTTC
ATCCAGTTCATTTCGTACGTGTTGGTCATCTCCGTGTACGCCCTGCTGCT
GGCGGTGTGCCGGTTCTGCGCGTGCCTCAAGAACATTGGCGCTTGCCAAA
CCTCCCCGGCGAAGGACATGGCGGTGGTGTTTTTGGTGGTGGAG
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