mRNA_Ecto-sp9_F_contig10161.196.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig10161.196.1
Unique NamemRNA_Ecto-sp9_F_contig10161.196.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10161.196.1 vs.
Match: Formate--tetrahydrofolate (ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVA0_9PHAE)

HSP 1 Score: 492 bits (1267), Expect = 7.440e-170
Identity = 250/255 (98.04%), Postives = 253/255 (99.22%), Query Frame = 1 
Query:    1 KALFRRLCPENGGERRFAPVMLSRLSKLGIDKTRPEDLTDEEISRFARLDIDPSSITWKRVIDTCDRMLRSITVGQGPKEGESRGAVRETGFDITVASEIMAVLALATSLQDLRDRLGRMVIGRSRRGEAVTTDDLGVSGALCVLMKDAIKPTLMQTAEKTPVLVHAGPFANIAHGNSSIVADRVALKLVGEDGFVVTEAGFGADIGMEKFFNIKCRASGNTPQCAVLVATVRALKMHGGGPPVKAGTPLAGVYK 765
            +ALFRRLCPENG ERRFAPVMLSRLSKLGIDKTRPEDLTDEEISRFARLDIDPSSITWKRV+DTCDRMLRSITVGQGPKEGESRGAVRETGFDITVASEIMAVLALATSLQDLRDRLGRMVIGRSRRGEAVTTDDLGVSGALCVLMKDAIKPTLMQTAE+TPVLVHAGPFANIAHGNSSIVADRVALKLVGEDGFVVTEAGFGADIGMEKFFNIKCRASGNTPQCAVLVATVRALKMHGGGPPVKAGTPLA VYK
Sbjct:  175 EALFRRLCPENGRERRFAPVMLSRLSKLGIDKTRPEDLTDEEISRFARLDIDPSSITWKRVVDTCDRMLRSITVGQGPKEGESRGAVRETGFDITVASEIMAVLALATSLQDLRDRLGRMVIGRSRRGEAVTTDDLGVSGALCVLMKDAIKPTLMQTAEQTPVLVHAGPFANIAHGNSSIVADRVALKLVGEDGFVVTEAGFGADIGMEKFFNIKCRASGNTPQCAVLVATVRALKMHGGGPPVKAGTPLANVYK 429
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10161.196.1 vs.
Match: Formate--tetrahydrofolate (ligase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C5S4_PYTIN)

HSP 1 Score: 388 bits (997), Expect = 7.360e-130
Identity = 197/255 (77.25%), Postives = 216/255 (84.71%), Query Frame = 1 
Query:    1 KALFRRLCPE-NGGERRFAPVMLSRLSKLGIDKTRPEDLTDEEISRFARLDIDPSSITWKRVIDTCDRMLRSITVGQGPKEGESRGAVRETGFDITVASEIMAVLALATSLQDLRDRLGRMVIGRSRRGEAVTTDDLGVSGALCVLMKDAIKPTLMQTAEKTPVLVHAGPFANIAHGNSSIVADRVALKLVGEDGFVVTEAGFGADIGMEKFFNIKCRASGNTPQCAVLVATVRALKMHGGGPPVKAGTPLAGVY 762
            KALF RLCP    G RRFAPVML RL KLGI+KT P+DLTD+EISRFARLDIDP SITW+RV+DTCDR LR +T+G  P E   +G VR TGFDITVASEIMA+LAL TSL+D+R+RLGR+VIG  R+GE VT DDLGV GAL VLMKDAI PTLMQTAE TPV VHAGPFANIAHGNSSI+AD++ALKL GEDG+VVTE GFGADIGMEKFFNIKCRASG TPQC VLV+TVRALKMHGGGP V AG PL  VY
Sbjct:  116 KALFNRLCPRAKDGSRRFAPVMLRRLRKLGIEKTNPDDLTDDEISRFARLDIDPDSITWQRVLDTCDRFLRQVTIGVAPTE---KGRVRTTGFDITVASEIMAILALTTSLEDMRERLGRIVIGLDRKGEPVTADDLGVGGALAVLMKDAIMPTLMQTAEGTPVFVHAGPFANIAHGNSSIIADQIALKLAGEDGYVVTECGFGADIGMEKFFNIKCRASGLTPQCVVLVSTVRALKMHGGGPSVVAGQPLDPVY 367
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10161.196.1 vs.
Match: Formate--tetrahydrofolate (ligase n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3V120_9STRA)

HSP 1 Score: 384 bits (985), Expect = 2.410e-129
Identity = 194/254 (76.38%), Postives = 214/254 (84.25%), Query Frame = 1 
Query:    4 ALFRRLCPENGGERRFAPVMLSRLSKLGIDKTRPEDLTDEEISRFARLDIDPSSITWKRVIDTCDRMLRSITVGQGPKEGESRGAVRETGFDITVASEIMAVLALATSLQDLRDRLGRMVIGRSRRGEAVTTDDLGVSGALCVLMKDAIKPTLMQTAEKTPVLVHAGPFANIAHGNSSIVADRVALKLVGEDGFVVTEAGFGADIGMEKFFNIKCRASGNTPQCAVLVATVRALKMHGGGPPVKAGTPLAGVYK 765
            ALFRRLCP   G+R FAP+ML RL KLGIDKT P+DLT+EEI+ FARLDIDP +ITWKRV+D CDR LR ITVG    + E +G  R+TGFDITVASEIMAVLAL TSL D+R+RLGRMVIG S+ GE +TTDDLGV GAL VLMK+AI PTLMQT EKTP L+HAGPFANIAHGNSSI+AD++ALKLVGEDG+ VTEAGFGADIGMEKFFNIKCR SG TPQC VLVATVRALK HGGGP VK G PL  VYK
Sbjct:   22 ALFRRLCPAVDGKREFAPIMLKRLKKLGIDKTNPDDLTEEEITSFARLDIDPETITWKRVVDVCDRHLRKITVGLA--DTEKKGTPRDTGFDITVASEIMAVLALTTSLADMRERLGRMVIGLSKSGEPITTDDLGVGGALAVLMKEAIMPTLMQTIEKTPCLIHAGPFANIAHGNSSILADQIALKLVGEDGYCVTEAGFGADIGMEKFFNIKCRYSGLTPQCVVLVATVRALKTHGGGPAVKPGQPLDPVYK 273
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10161.196.1 vs.
Match: Formate--tetrahydrofolate (ligase (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CJ36_PYTIN)

HSP 1 Score: 381 bits (978), Expect = 2.960e-129
Identity = 193/250 (77.20%), Postives = 212/250 (84.80%), Query Frame = 1 
Query:    1 KALFRRLCPE-NGGERRFAPVMLSRLSKLGIDKTRPEDLTDEEISRFARLDIDPSSITWKRVIDTCDRMLRSITVGQGPKEGESRGAVRETGFDITVASEIMAVLALATSLQDLRDRLGRMVIGRSRRGEAVTTDDLGVSGALCVLMKDAIKPTLMQTAEKTPVLVHAGPFANIAHGNSSIVADRVALKLVGEDGFVVTEAGFGADIGMEKFFNIKCRASGNTPQCAVLVATVRALKMHGGGPPVKAGTP 747
            KALF RLCP    G RRFAPVML RL KLGI+KT P+DLTD+EISRFARLDIDP SITW+RV+DTCDR LR +T+G  P E   +G VR TGFDITVASEIMA+LAL TSL+D+R+RLGR+VIG  R+GE VT DDLGV GAL VLMKDAI PTLMQTAE TPV VHAGPFANIAHGNSSI+AD++ALKL GE G+VVTE GFGADIGMEKFFNIKCRASG TPQC VLV+TVRALKMHGGGP V AG P
Sbjct:  171 KALFNRLCPRAKDGSRRFAPVMLRRLRKLGIEKTNPDDLTDDEISRFARLDIDPDSITWQRVLDTCDRFLRQVTIGVAPTE---KGRVRTTGFDITVASEIMAILALTTSLEDMRERLGRIVIGLDRKGEPVTADDLGVGGALAVLMKDAIMPTLMQTAEGTPVFVHAGPFANIAHGNSSIIADQIALKLAGEXGYVVTECGFGADIGMEKFFNIKCRASGLTPQCVVLVSTVRALKMHGGGPSVVAGQP 417
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10161.196.1 vs.
Match: Formate--tetrahydrofolate (ligase (Fragment) n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BZ06_9CHLO)

HSP 1 Score: 378 bits (971), Expect = 4.480e-127
Identity = 195/251 (77.69%), Postives = 214/251 (85.26%), Query Frame = 1 
Query:    1 KALFRRLCP-ENGGERRFAPVMLSRLSKLGIDKTRPEDLTDEEISRFARLDIDPSSITWKRVIDTCDRMLRSITVGQGPKEGESRGAVRETGFDITVASEIMAVLALATSLQDLRDRLGRMVIGRSRRGEAVTTDDLGVSGALCVLMKDAIKPTLMQTAEKTPVLVHAGPFANIAHGNSSIVADRVALKLVGEDGFVVTEAGFGADIGMEKFFNIKCRASGNTPQCAVLVATVRALKMHGGGPPVKAGTPL 750
            +ALF RLCP +  G+R+FA VM  RL+KLGIDKT PE+LT EE   FARLDIDP+SITW+RVIDT DR LRSITVGQGP+E   +GA R TGFDITV+SEIMAVLALAT L D+R+RLGRMV+G   +G  VT DDLGV GAL VLMKDAI PTLMQT E+TPVLVHAGPFANIAHGNSS+VAD++ LKLVGEDGFVVTEAGFGADIGMEKF NIKCRASG TP C VLVATVRALKMHGGGPPV AGTPL
Sbjct:  173 EALFNRLCPADKQGKRKFASVMSRRLAKLGIDKTDPEELTSEERREFARLDIDPASITWRRVIDTNDRFLRSITVGQGPEE---KGATRSTGFDITVSSEIMAVLALATDLADMRERLGRMVVGNDTKGRPVTADDLGVGGALTVLMKDAILPTLMQTLEQTPVLVHAGPFANIAHGNSSVVADQIGLKLVGEDGFVVTEAGFGADIGMEKFMNIKCRASGLTPDCVVLVATVRALKMHGGGPPVVAGTPL 420
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10161.196.1 vs.
Match: Formate--tetrahydrofolate (ligase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=T0RF22_SAPDV)

HSP 1 Score: 379 bits (973), Expect = 1.360e-125
Identity = 194/255 (76.08%), Postives = 214/255 (83.92%), Query Frame = 1 
Query:    1 KALFRRLCP-ENGGERRFAPVMLSRLSKLGIDKTRPEDLTDEEISRFARLDIDPSSITWKRVIDTCDRMLRSITVGQGPKEGESRGAVRETGFDITVASEIMAVLALATSLQDLRDRLGRMVIGRSRRGEAVTTDDLGVSGALCVLMKDAIKPTLMQTAEKTPVLVHAGPFANIAHGNSSIVADRVALKLVGEDGFVVTEAGFGADIGMEKFFNIKCRASGNTPQCAVLVATVRALKMHGGGPPVKAGTPLAGVY 762
            KALF RLCP +  G R FAPVML RL KLGI KT P +LTD+EISRFARLDIDP+++TW RV+DTCDR LR IT+G+ P E   +G  RETGFDITVASEIMAVLALATSL D+R+RLGRMV+G SR+G+ VT DDLGV GAL  LMKDAI PTLMQT E+TPVLVHAGPFANIAHGNSSI+AD++ALKLVG DG VVTEAGFGADIGMEKFF+IKCR SG  PQC VLVATVRALKMHGGGP V AG PL  VY
Sbjct:  170 KALFNRLCPAKKDGSRVFAPVMLRRLRKLGITKTNPSELTDDEISRFARLDIDPATLTWNRVLDTCDRFLRGITIGKAPTE---KGHERETGFDITVASEIMAVLALATSLDDMRERLGRMVVGMSRKGDPVTADDLGVGGALTALMKDAIMPTLMQTVEQTPVLVHAGPFANIAHGNSSIIADQIALKLVGRDGVVVTEAGFGADIGMEKFFDIKCRYSGLRPQCVVLVATVRALKMHGGGPTVTAGKPLDAVY 421
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10161.196.1 vs.
Match: Formate--tetrahydrofolate (ligase n=3 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453KXV3_AEGTS)

HSP 1 Score: 370 bits (951), Expect = 1.470e-125
Identity = 193/255 (75.69%), Postives = 213/255 (83.53%), Query Frame = 1 
Query:    1 KALFRRLCPENG-GERRFAPVMLSRLSKLGIDKTRPEDLTDEEISRFARLDIDPSSITWKRVIDTCDRMLRSITVGQGPKEGESRGAVRETGFDITVASEIMAVLALATSLQDLRDRLGRMVIGRSRRGEAVTTDDLGVSGALCVLMKDAIKPTLMQTAEKTPVLVHAGPFANIAHGNSSIVADRVALKLVGEDGFVVTEAGFGADIGMEKFFNIKCRASGNTPQCAVLVATVRALKMHGGGPPVKAGTPLAGVY 762
            KALF RLCP N  G+RRFA VML RL KLGI KT P++LT EE+ RFARLDIDP+SITW+RV+D  DR LR ITVGQGP E   +G VRETGFDI+VASEIMAVLAL TSL D+R+RLGRMVIG S+ GE VT DDLG+ GAL VLMKDAI PTLMQT E TPVLVHAGPFANIAHGNSSIVAD++ALKLVG+ GFVVTEAGFGADIG EKF +IKCR SG TPQCA++VAT+RALKMHGGGP V AG PL   Y
Sbjct:   34 KALFNRLCPANKEGKRRFADVMLRRLIKLGISKTDPDELTPEEVRRFARLDIDPASITWRRVMDVNDRFLRKITVGQGPDE---KGMVRETGFDISVASEIMAVLALTTSLADMRERLGRMVIGNSKAGEPVTADDLGLGGALTVLMKDAIHPTLMQTLEGTPVLVHAGPFANIAHGNSSIVADKIALKLVGKGGFVVTEAGFGADIGTEKFMDIKCRYSGLTPQCAIIVATIRALKMHGGGPDVVAGKPLDHAY 285
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10161.196.1 vs.
Match: Formate--tetrahydrofolate (ligase n=23 Tax=Peronosporaceae TaxID=4777 RepID=A0A2P4X4K6_9STRA)

HSP 1 Score: 380 bits (975), Expect = 4.750e-125
Identity = 193/255 (75.69%), Postives = 211/255 (82.75%), Query Frame = 1 
Query:    1 KALFRRLCPEN-GGERRFAPVMLSRLSKLGIDKTRPEDLTDEEISRFARLDIDPSSITWKRVIDTCDRMLRSITVGQGPKEGESRGAVRETGFDITVASEIMAVLALATSLQDLRDRLGRMVIGRSRRGEAVTTDDLGVSGALCVLMKDAIKPTLMQTAEKTPVLVHAGPFANIAHGNSSIVADRVALKLVGEDGFVVTEAGFGADIGMEKFFNIKCRASGNTPQCAVLVATVRALKMHGGGPPVKAGTPLAGVY 762
            KALFRRLCP +  G R+F+PVM  RL KLGI K  P+DLTDEEI +FARLDIDP +ITW+RV+DTCDR LR + VG GP E   +G  R TGFDITVASEIMA+LAL TSLQD+R+RLGR+VIG SR GE VT DDLGV GAL VLMKDAI PTLMQT E TPV VHAGPFANIAHGNSSI+AD++ALKL GEDGFVVTE GFGADIGMEKFFNIKCR SG TPQC VLV+TVRALKMHGGGP V AG PL  VY
Sbjct:  237 KALFRRLCPTSKDGSRKFSPVMFKRLQKLGITKVSPDDLTDEEIHKFARLDIDPDTITWQRVLDTCDRFLRQVVVGAGPAE---KGQTRTTGFDITVASEIMAILALTTSLQDMRERLGRIVIGMSRDGEPVTADDLGVGGALAVLMKDAILPTLMQTVEGTPVFVHAGPFANIAHGNSSIIADQIALKLAGEDGFVVTECGFGADIGMEKFFNIKCRTSGLTPQCVVLVSTVRALKMHGGGPNVVAGKPLDAVY 488
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10161.196.1 vs.
Match: Formate--tetrahydrofolate (ligase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WBW9_9STRA)

HSP 1 Score: 376 bits (965), Expect = 2.240e-124
Identity = 194/255 (76.08%), Postives = 213/255 (83.53%), Query Frame = 1 
Query:    1 KALFRRLCP-ENGGERRFAPVMLSRLSKLGIDKTRPEDLTDEEISRFARLDIDPSSITWKRVIDTCDRMLRSITVGQGPKEGESRGAVRETGFDITVASEIMAVLALATSLQDLRDRLGRMVIGRSRRGEAVTTDDLGVSGALCVLMKDAIKPTLMQTAEKTPVLVHAGPFANIAHGNSSIVADRVALKLVGEDGFVVTEAGFGADIGMEKFFNIKCRASGNTPQCAVLVATVRALKMHGGGPPVKAGTPLAGVY 762
            KALF RLCP +  G R FA VML RL+KLGIDKT P DLT++EI RFARLDIDP++ITW RV+DTCDR LR +T+GQ   E    G  R+TGFDITVASEIMAVLALATSL+D+R+RLGRMVIG SR G  VTTDDLGV GAL  LMKDAI PTLMQT E+TPVLVHAGPFANIAHGNSSI+AD++ALKLVG +G VVTEAGFGADIGMEKFF+IKCRASG  PQC VLVATVRALKMHGGGP V AG PL  VY
Sbjct:  170 KALFNRLCPVKKDGSRVFASVMLRRLAKLGIDKTNPNDLTEDEIRRFARLDIDPATITWNRVLDTCDRFLRGVTIGQAATEA---GHSRDTGFDITVASEIMAVLALATSLEDMRERLGRMVIGMSRAGNPVTTDDLGVGGALTALMKDAIMPTLMQTVEQTPVLVHAGPFANIAHGNSSIIADQIALKLVGPEGIVVTEAGFGADIGMEKFFDIKCRASGLVPQCVVLVATVRALKMHGGGPTVTAGKPLDPVY 421
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10161.196.1 vs.
Match: Formate--tetrahydrofolate (ligase n=2 Tax=Mesangiospermae TaxID=1437183 RepID=A0A067F6E5_CITSI)

HSP 1 Score: 373 bits (958), Expect = 3.210e-124
Identity = 192/255 (75.29%), Postives = 213/255 (83.53%), Query Frame = 1 
Query:    1 KALFRRLCPENG-GERRFAPVMLSRLSKLGIDKTRPEDLTDEEISRFARLDIDPSSITWKRVIDTCDRMLRSITVGQGPKEGESRGAVRETGFDITVASEIMAVLALATSLQDLRDRLGRMVIGRSRRGEAVTTDDLGVSGALCVLMKDAIKPTLMQTAEKTPVLVHAGPFANIAHGNSSIVADRVALKLVGEDGFVVTEAGFGADIGMEKFFNIKCRASGNTPQCAVLVATVRALKMHGGGPPVKAGTPLAGVY 762
            KALF RLCP N  GER F+ +M  RL KLGI KT+PEDLT EEI+RFARLDIDP+SITW+RV+D  DR LR IT+GQGP+E   +G VRETGFDI+VASEIMAVLAL TSL D+R+RLG+MVIG S+ G+ +T DDLGV GAL VLMKDAI PTLMQT E TPVLVHAGPFANIAHGNSSIVAD++ALKLVG  GFVVTEAGFGADIG EKF NIKCR SG TPQCAV+VAT+RALKMHGGGP V AG PL   Y
Sbjct:  173 KALFNRLCPPNKEGERSFSNIMFRRLKKLGISKTKPEDLTPEEINRFARLDIDPASITWRRVMDVNDRFLRKITIGQGPEE---KGMVRETGFDISVASEIMAVLALTTSLADMRERLGKMVIGNSKAGDPITADDLGVGGALTVLMKDAINPTLMQTLEGTPVLVHAGPFANIAHGNSSIVADKIALKLVGPGGFVVTEAGFGADIGAEKFMNIKCRYSGLTPQCAVIVATIRALKMHGGGPQVVAGKPLDHAY 424
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10161.196.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Formate--tetrahydrofolate7.440e-17098.04ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K... [more]
Formate--tetrahydrofolate7.360e-13077.25ligase n=1 Tax=Pythium insidiosum TaxID=114742 Rep... [more]
Formate--tetrahydrofolate2.410e-12976.38ligase n=1 Tax=Aplanochytrium stocchinoi TaxID=215... [more]
Formate--tetrahydrofolate2.960e-12977.20ligase (Fragment) n=1 Tax=Pythium insidiosum TaxID... [more]
Formate--tetrahydrofolate4.480e-12777.69ligase (Fragment) n=1 Tax=Volvox africanus TaxID=5... [more]
Formate--tetrahydrofolate1.360e-12576.08ligase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=T0... [more]
Formate--tetrahydrofolate1.470e-12575.69ligase n=3 Tax=Aegilops tauschii subsp. strangulat... [more]
Formate--tetrahydrofolate4.750e-12575.69ligase n=23 Tax=Peronosporaceae TaxID=4777 RepID=A... [more]
Formate--tetrahydrofolate2.240e-12476.08ligase n=1 Tax=Aphanomyces euteiches TaxID=100861 ... [more]
Formate--tetrahydrofolate3.210e-12475.29ligase n=2 Tax=Mesangiospermae TaxID=1437183 RepID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10161contigEcto-sp9_F_contig10161:128..4395 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score496.5
Seed ortholog evalue7.4e-138
Seed eggNOG ortholog2880.D8LDA9
Preferred nameTHFS
KEGG rclassRC00026,RC00111,RC00202,RC00578
KEGG koko:K00288,ko:K01938
KEGG ReactionR00943,R01220,R01655
KEGG Pathwayko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200
KEGG ModuleM00140,M00141,M00377
GOsGO:0003674,GO:0003824,GO:0004329,GO:0004477,GO:0004488,GO:0005488,GO:0005507,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006144,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009112,GO:0009113,GO:0009256,GO:0009257,GO:0009396,GO:0009507,GO:0009536,GO:0009719,GO:0009725,GO:0009735,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0016020,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0016874,GO:0016879,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0034641,GO:0042221,GO:0042398,GO:0042440,GO:0042558,GO:0042559,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046148,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0046686,GO:0046872,GO:0046914,GO:0048046,GO:0050896,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.formate-tetrahydrofolate ligase activity
EggNOG OGs2QSVW@2759,COG2759@1
EC1.5.1.5,3.5.4.9,6.3.4.3
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionFormate-tetrahydrofolate ligase, FTHFS
Ec32 orthologEc-25_001900.1
Exons6
Model size765
Cds size765
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10161.196.1prot_Ecto-sp9_F_contig10161.196.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig10161 128..4395 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928211.488279-CDS-Ecto-sp9_F_contig10161:127..2701622928211.488279-CDS-Ecto-sp9_F_contig10161:127..270Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10161 128..270 +
1692277796.710996-CDS-Ecto-sp9_F_contig10161:127..2701692277796.710996-CDS-Ecto-sp9_F_contig10161:127..270Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10161 128..270 +
1622928211.5012817-CDS-Ecto-sp9_F_contig10161:861..10781622928211.5012817-CDS-Ecto-sp9_F_contig10161:861..1078Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10161 862..1078 +
1692277796.7242308-CDS-Ecto-sp9_F_contig10161:861..10781692277796.7242308-CDS-Ecto-sp9_F_contig10161:861..1078Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10161 862..1078 +
1622928211.5128303-CDS-Ecto-sp9_F_contig10161:1652..17331622928211.5128303-CDS-Ecto-sp9_F_contig10161:1652..1733Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10161 1653..1733 +
1692277796.7341416-CDS-Ecto-sp9_F_contig10161:1652..17331692277796.7341416-CDS-Ecto-sp9_F_contig10161:1652..1733Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10161 1653..1733 +
1622928211.525923-CDS-Ecto-sp9_F_contig10161:2333..24681622928211.525923-CDS-Ecto-sp9_F_contig10161:2333..2468Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10161 2334..2468 +
1692277796.7443724-CDS-Ecto-sp9_F_contig10161:2333..24681692277796.7443724-CDS-Ecto-sp9_F_contig10161:2333..2468Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10161 2334..2468 +
1622928211.5353258-CDS-Ecto-sp9_F_contig10161:3287..33561622928211.5353258-CDS-Ecto-sp9_F_contig10161:3287..3356Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10161 3288..3356 +
1692277796.751985-CDS-Ecto-sp9_F_contig10161:3287..33561692277796.751985-CDS-Ecto-sp9_F_contig10161:3287..3356Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10161 3288..3356 +
1622928211.545983-CDS-Ecto-sp9_F_contig10161:4275..43951622928211.545983-CDS-Ecto-sp9_F_contig10161:4275..4395Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10161 4276..4395 +
1692277796.7595499-CDS-Ecto-sp9_F_contig10161:4275..43951692277796.7595499-CDS-Ecto-sp9_F_contig10161:4275..4395Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10161 4276..4395 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig10161.196.1

>prot_Ecto-sp9_F_contig10161.196.1 ID=prot_Ecto-sp9_F_contig10161.196.1|Name=mRNA_Ecto-sp9_F_contig10161.196.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=255bp
KALFRRLCPENGGERRFAPVMLSRLSKLGIDKTRPEDLTDEEISRFARLD
IDPSSITWKRVIDTCDRMLRSITVGQGPKEGESRGAVRETGFDITVASEI
MAVLALATSLQDLRDRLGRMVIGRSRRGEAVTTDDLGVSGALCVLMKDAI
KPTLMQTAEKTPVLVHAGPFANIAHGNSSIVADRVALKLVGEDGFVVTEA
GFGADIGMEKFFNIKCRASGNTPQCAVLVATVRALKMHGGGPPVKAGTPL
AGVYK
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mRNA from alignment at Ecto-sp9_F_contig10161:128..4395+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig10161.196.1 ID=mRNA_Ecto-sp9_F_contig10161.196.1|Name=mRNA_Ecto-sp9_F_contig10161.196.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=4268bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10161:128..4395+ (Ectocarpus species9 EcSCA_722f female)
AAGGCGCTCTTTCGGAGGCTGTGCCCGGAGAACGGAGGAGAGCGGCGGTT
CGCCCCGGTGATGCTGAGCCGGCTGTCGAAGCTGGGCATCGACAAGACAA
GGCCTGAGGATCTCACCGACGAAGAAATCAGCCGGTTCGCAAGGTACTAA
TTTAGGTCATTTTTGTTTTTTATCGTCGTTTAGGAAGTAGTCATTGGTGT
CCATATGTTCGCAAGGTACTAAGGTAGGTCATTTTTTTGTTTTTATCGTC
CCTTAGGAAGTAATCATTGGTGTCCATATTGCTGCAACATGCATGTCGGT
TGTTCGACATCCTGGACCTGCTTTGACCCGTCCCCTTCCTTCCGACTTTC
TCCACCATGACCATTTTTTCTCCTGAATACAGGTTCACAGAAAGCCTCCC
TTCTTGCGTGACCTTCTCCATGAGTCGTATCTACATATACAGCTTGGTTC
TAGAGACTCTTCATGCCAACCCTTCGAGGTGTAGAAAGTTGAGTCGGCAA
CATTCTCGATCGTGCCGCAGAAGAGAATGAAAGAAGCAAATCCCCCCCGG
ACATTTTTGAGCCATCTTTGTCAAAGTAGGAAGGAAAGATTGCCCATCGG
CGATCGGTCCTGTCGGAACACTGTTCTGTTCCGTCCTCTCGAGGACGCGT
GGTCAACGGCCTAACCGCATGCAATAAATTAGTAACCCCCCAATCTTTTC
GATTCGGCCGCGGAATCCCCCCCCCCCCGGACAGATTGGACATCGACCCT
TCGAGCATCACGTGGAAGAGGGTGATAGACACCTGCGACCGGATGCTTCG
AAGCATAACGGTGGGCCAGGGTCCCAAGGAGGGTGAGTCGCGCGGCGCCG
TCCGCGAGACAGGGTTCGACATCACGGTGGCCAGCGAGATCATGGCGGTC
CTCGCCCTGGCGACCTCGTTGCAGGACCTGAGGGACCGCTTGGGAAGGAT
GGTGCGTGCCTGCGGCAGGCGTAGAGGCGGGCAGTGTGTGAATAAACGCA
GCGGGTGAAGGGACCGCCGACGCAGGATTTTAAGAGTATCAAGATAAAGA
ATAGGGAGGGGGCACGCAGACCCTATCCCTAACCGTAACCCCAAAGCACG
GATTGAGTACTTTATCCCATACGTTTTCTTAATCAATTTTGCTGCGTAGA
CTACTGGGGTGAAGGGTTTGCAGCGGAAAAACTTCGACAAGACAAATATA
TGCATAGTTACAAGTTTTTTTTTTTTGGGTCTCGGTCCGGATTAGCCAAC
GTTTTGAAAACACGCTCAGACATTTTCTTTTTTCTTGTTTTGTCGTTTAT
GTCTGTCTTGAAAAGCCCTAACAACAAAGCACACAACACACCCCAGAAGT
ATTTTTGCTGGTGCTGGCAATCTTGTCGCCGTGTATTGTTCAGAAAGACA
AAGCTGATGCATTTTTTTTTTACAGGCCCTAACAACATTTCTTGTGTGTG
CAGGCCGCTGTGCGTTGTTCAGATTAACAAGGCTGATTCAAATTGTGTGA
CCTTGGTTGTTGTCGTTCGGACAAGGTGATTGGCAGGAGCAGACGAGGCG
AGGCCGTGACGACGGACGATCTTGGGGTGTCGGGGGCCCTGTGCGTGCTG
ATGAAGGTATGGCAAGGGTGTGTGTGCCCAGGCGTCTGTGCGAGTTGTTG
TTGTTGTTGTTGTTGTTGCTGCTGTTGTTGTTTTGTTTGTTGTGTTTGTT
GTAGTTGTAGTTGCAGCTGTAATTGTTTTTGTTTTTGTTGTGTTTGTTGT
TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGCTGCTGTTACTG
CTGCTGCTGATGTAATCTGGGCGGTCTTTCCCCCTTTGTAGCCCGTGGCT
CATACTGTGAAATGTGCGCAATTACCAGCACGAAGGCAGGATATTTACTC
AGGCACTAGCGTGAGCCGTGTCGAGAACACTCTTCTGCGTGTCTGTGTCT
GTCTGTCCGTCCGTCCGTCCGTCCGTCCGTCTGTCTGTCTGTCTGTCTGT
CTGTCTGTCTGTCGGCGTGAGTTTGTCTGTCCCTATGCCTCTCTGTCTAC
CTTTCTGTCTGTTTGCCGGCCTGCTTTGCCTACCTGTCTTGTCCGTCTGT
CCGTGAGTTCTTCGGCCGCCACGGGACCCGTTCTGAGCAGAATCCGTCCA
TTCGTCCATTCGGTGTGCGTGTGCATGCGTCGCGCCATCCCCTCCGTCTT
CGTCAGGACGCAATAAAGCCCACCCTGATGCAGACGGCGGAGAAGACTCC
GGTGCTCGTGCACGCGGGGCCGTTTGCCAACATCGCTCACGGGAACTCTT
CCATCGTGGCGGACAGGGTAGCCCTCAAGCTCGTAGGAGAGGTTCGTGTG
TTTGTTGCTTGTTTTGCAGTTTGCTGCTGTTGTTGTAGTTGTTGTTGTTG
TAGTTGTTGTAGTTGTTGTAGTTGAGTTGTTGTAGTTGTTCTTTCTTCTT
GTTCTTGTTCTTCTTGTTCTTCTTCTTAATCTTCTTGTTCTTCTGCCCCC
CCCCCCCTCCTGGGGTACACATGAAACCACGGGTGCCCCGAAACCTCATA
GCCCTCAGGTCGTCCGGGAGGTGTGCGTGTGTTTGTTGCTGAAGTGTTGT
TGTTGTTGGTGTTGTTGTGCCCCCGCCCCTCCCGGAGCCCCTATGAATGC
ACGGGACTCCCGAAGTCTCACAGCCCTCAGCTCGTCGGAAAGGGGTGGGT
ATGTTTGTTGCTTGCTTGTTGTTGGTGTCATGGACGTTGATGGAAAATTA
TGATTTTCCAAGCAAAAGCTGACCATAGACATGGAAGATGTGCGCAGGGC
TTAAGTGTAGAGCAGAACAACCTCAAACGTTTAGCTGGTTGGGGCTGGGG
CTAATGAATGAAATTACGCCTGATTATTGCCGAGGACTCCAGGAGCGTTT
CTGGTAAAAAACCCTCACCGTGTTACTGACCCTGCCAACATTCGATGCGA
CAACCAATCAAGGAACAGGTGCGACAGCAATGCACTACAAGTATGTTCAA
CTGACAGACCCGTATGGTGGAAAGGTGTGCTTGGGTTTCGCCCGCGAAGT
TATTCTCCCTGAGATGTTCTCGAGAGCAACAACAGTAATGCAAACCTGTT
TCCGTTTTTCCTCCCGTCGTCTCCGCTTGGTCTTCTTTCGTTGCACGGGT
GTACTGGTAGGACGGGTTTGTTGTGACGGAGGCGGGGTTCGGGGCTGACA
TCGGCATGGAGAAGTTTTTCAACATCAAGGTGAGCAAGCGAGAGAGAGGG
AGAGAGAGAGAGAGCCATGGATGGATACATTCGTACTTTTGTTTTTTTTT
CTCTTTTGCAGGGATCGGCTTCCTTGCGCAACACCTATCATCAATCTCAA
CCTTGCGCACCTACCCCCCCCCCCCGTGCGCCCGATAATATCTGACCCAC
CGACAATCCACCCTCCGCCAACAACGTCGTTTTTCCTCCTTGCTCTGTAT
TGTACTTGTATGCGTACGGCCCTCTCCCGTCACCTGTTGCCCGTGCCCCG
TCTCCCCTCCTGTTACCCTACCCTTCGTGATTTCCGTGTGGAACGTTAAA
TAAACACAATCCTCTATTCTTCTCCCACCCACCCCCCTTTGTGAAACACG
ATGCCCAGGCAAACAGTAGAACCATGCACATCGTCTCACCTTCACCAATA
TTGCTTTTCTTCGTTCCCGCCGATAAGTTTCCCCCCATTCCTCACTTGTG
GTGGTGCTCCCTGCTTTGGTTCCTCCTGGTCCTTGCCTTCATTCTCATCA
TTGTCCTTGCTCACGCTATCTGTTTCTTTCGGCCCGTTCTTTCGTCCCTC
TTGATCCTTGCGTTCATTCTCATCGTTGTCCTTGCTCGCGCTGCGTGTTT
CACTCTGGCTGGTTGTTTCTTTCTTCCCTCTGGTTCTCCTTGCCCGTGTT
CTTGCTCTCTGATGTTCCCTTTTTTCTTTCTTTCTTTCTTTCCTTCTTTC
TTTCTTCTTACCTTCTTCCCTTCTTTCTTTCTTTCTTTCTTTCGTTCTTT
CTTTCCTTCTTTTTTCCTTTCTGTCTTTCTTTCTTTCTTTCTTTCTTTCT
TTCTTTCTTTGTTTCCTTCTTTCCGTCCTTCCTTCCTTCCTTCTCTCTTA
CTATCCTGTTCGTTTCCCACAAAACCAACAAAACGGAACACAAAACAGTG
TCGGGCCTCGGGAAACACGCCGCAGTGCGCAGTGCTCGTTGCGACGGTTC
GCGCCCTCAAGATGCACGGCGGGGGCCCGCCTGTCAAGGCTGGTACCCCT
TTGGCCGGCGTGTACAAG
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10161:128..4395+

>mRNA_Ecto-sp9_F_contig10161.196.1 ID=mRNA_Ecto-sp9_F_contig10161.196.1|Name=mRNA_Ecto-sp9_F_contig10161.196.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1530bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10161:128..4395+ (Ectocarpus species9 EcSCA_722f female)
AAGGCGCTCTTTCGGAGGCTGTGCCCGGAGAACGGAGGAGAGCGGCGGTT
CGCCCCGGTGATGCTGAGCCGGCTGTCGAAGCTGGGCATCGACAAGACAA
GGCCTGAGGATCTCACCGACGAAGAAATCAGCCGGTTCGCAAGAAGGCGC
TCTTTCGGAGGCTGTGCCCGGAGAACGGAGGAGAGCGGCGGTTCGCCCCG
GTGATGCTGAGCCGGCTGTCGAAGCTGGGCATCGACAAGACAAGGCCTGA
GGATCTCACCGACGAAGAAATCAGCCGGTTCGCAAGATTGGACATCGACC
CTTCGAGCATCACGTGGAAGAGGGTGATAGACACCTGCGACCGGATGCTT
CGAAGCATAACGGTGGGCCAGGGTCCCAAGGAGGGTGAGTCGCGCGGCGC
CGTCCGCGAGACAGGGTTCGACATCACGGTGGCCAGCGAGATCATGGCGG
TCCTCGCCCTGGCGACCTCGTTGCAGGACCTGAGGGACCGCTTGGGAAGG
ATGATTGGACATCGACCCTTCGAGCATCACGTGGAAGAGGGTGATAGACA
CCTGCGACCGGATGCTTCGAAGCATAACGGTGGGCCAGGGTCCCAAGGAG
GGTGAGTCGCGCGGCGCCGTCCGCGAGACAGGGTTCGACATCACGGTGGC
CAGCGAGATCATGGCGGTCCTCGCCCTGGCGACCTCGTTGCAGGACCTGA
GGGACCGCTTGGGAAGGATGGTGATTGGCAGGAGCAGACGAGGCGAGGCC
GTGACGACGGACGATCTTGGGGTGTCGGGGGCCCTGTGCGTGCTGATGAA
GGTGATTGGCAGGAGCAGACGAGGCGAGGCCGTGACGACGGACGATCTTG
GGGTGTCGGGGGCCCTGTGCGTGCTGATGAAGGACGCAATAAAGCCCACC
CTGATGCAGACGGCGGAGAAGACTCCGGTGCTCGTGCACGCGGGGCCGTT
TGCCAACATCGCTCACGGGAACTCTTCCATCGTGGCGGACAGGGTAGCCC
TCAAGCTCGTAGGAGAGGACGCAATAAAGCCCACCCTGATGCAGACGGCG
GAGAAGACTCCGGTGCTCGTGCACGCGGGGCCGTTTGCCAACATCGCTCA
CGGGAACTCTTCCATCGTGGCGGACAGGGTAGCCCTCAAGCTCGTAGGAG
AGGACGGGTTTGTTGTGACGGAGGCGGGGTTCGGGGCTGACATCGGCATG
GAGAAGTTTTTCAACATCAAGGACGGGTTTGTTGTGACGGAGGCGGGGTT
CGGGGCTGACATCGGCATGGAGAAGTTTTTCAACATCAAGTGTCGGGCCT
CGGGAAACACGCCGCAGTGCGCAGTGCTCGTTGCGACGGTTCGCGCCCTC
AAGATGCACGGCGGGGGCCCGCCTGTCAAGGCTGGTACCCCTTTGGCCGG
CGTGTACAAGTGTCGGGCCTCGGGAAACACGCCGCAGTGCGCAGTGCTCG
TTGCGACGGTTCGCGCCCTCAAGATGCACGGCGGGGGCCCGCCTGTCAAG
GCTGGTACCCCTTTGGCCGGCGTGTACAAG
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