mRNA_Ecto-sp9_F_contig10118.157.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig10118.157.1 vs.
Match: DUF547 (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR47_ECTSI) HSP 1 Score: 484 bits (1247), Expect = 8.490e-173 Identity = 229/234 (97.86%), Postives = 231/234 (98.72%), Query Frame = 1
Query: 1 AWPPADRLSEYVKESNLVDYRRLAAQEKEWLAPVISSIKSNNPTETDAERHAFLINAYNLWTLHYVIRERRFPGFKGAVSMLAKARFFYWHKVSTGAGRWNLYNFENKVIRPDLNDARVHFALNCASMSCPPLRRKLFTGPGLDAELDEVTSAAINGGAMVQLKEDGKALSVNPIFKWYKEDFDKEGGVEAFIRSRWAGSPIQEDPRIEFFDYDWRSNSADATWSDRALGGPAP 702
AWPPADRLSEYVKESNLVDYRRLAAQE EWLAPVISSIKSNNPTET+AERHAFLINAYNLWTLHYV+RERRFPGFKGAVSMLAKARFFYWHKVSTGAGRWNLYNFENKVIRPDLNDARVHFALNCASMSCPPLRRKLFTGPGLDAELDEVTSAAINGGAMVQLKEDGKALSVNPIFKWYKEDFDKEGGVE FIRSRW GSPIQEDPRIEFFDYDWRSNSADATWSDRALGGPAP
Sbjct: 35 AWPPADRLSEYVKESNLVDYRRLAAQENEWLAPVISSIKSNNPTETNAERHAFLINAYNLWTLHYVVRERRFPGFKGAVSMLAKARFFYWHKVSTGAGRWNLYNFENKVIRPDLNDARVHFALNCASMSCPPLRRKLFTGPGLDAELDEVTSAAINGGAMVQLKEDGKALSVNPIFKWYKEDFDKEGGVEVFIRSRWTGSPIQEDPRIEFFDYDWRSNSADATWSDRALGGPAP 268
BLAST of mRNA_Ecto-sp9_F_contig10118.157.1 vs.
Match: DUF547 (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8M1_9PHAE) HSP 1 Score: 468 bits (1205), Expect = 3.560e-166 Identity = 226/244 (92.62%), Postives = 229/244 (93.85%), Query Frame = 1
Query: 4 WPPADRLSEYVKESNLVDYRRLAAQEKEWLAPVISSIKSNNPTETDAERHAFLINAYNLWTLHYVIRERRFPGFKGAVSMLAKARFFYWHKVSTGAGRWNLYNFENKV-----------IRPDLNDARVHFALNCASMSCPPLRRKLFTGPGLDAELDEVTSAAINGGAMVQLKEDGKALSVNPIFKWYKEDFDKEGGVEAFIRSRWAGSPIQEDPRIEFFDYDWRSNSADATWSDRALGGPAP 702
WPPADRLSEYVKESNLVDY RLAA+EKEWLAPVI SIKSNNPTETDAERHAFLINAYNLWTLHYVIRERR PGFKGAVSMLAKARFFYWHKVSTGAGRWNLYNFENKV IRPDLNDARVHFALNCASMSCPPLRRKLFTGPGLDAELDEVTSAAINGGAMVQLKEDGKALSVNPIFKWYKEDFDKEGGVEAFIRSRW GSPIQ+DPRIEFFDYDWR+NSADATWSDRALGGPAP
Sbjct: 39 WPPADRLSEYVKESNLVDYGRLAAEEKEWLAPVILSIKSNNPTETDAERHAFLINAYNLWTLHYVIRERRCPGFKGAVSMLAKARFFYWHKVSTGAGRWNLYNFENKVGCVNSSLEDVVIRPDLNDARVHFALNCASMSCPPLRRKLFTGPGLDAELDEVTSAAINGGAMVQLKEDGKALSVNPIFKWYKEDFDKEGGVEAFIRSRWTGSPIQKDPRIEFFDYDWRTNSADATWSDRALGGPAP 282
BLAST of mRNA_Ecto-sp9_F_contig10118.157.1 vs.
Match: DUF547 (domain-containing protein n=1 Tax=Heimdallarchaeota archaeon (strain LC_2) TaxID=1841597 RepID=A0A1Q9N9X8_HEILC) HSP 1 Score: 159 bits (401), Expect = 5.810e-45 Identity = 91/214 (42.52%), Postives = 125/214 (58.41%), Query Frame = 1
Query: 22 LSEYVKESNLVDYRRLAAQEKEWLAPVISSIKSNNPTE-TDAERHAFLINAYNLWTLHYVIRE-RRFPGFKGAVSMLAKARFFYWHKVSTGAGRWNLYNFENKVIRPDLNDARVHFALNCASMSCPPLRRKLFTGPGLDAELDEVTSAAINGGAMVQLKEDGKALSVNPIFKWYKEDFDKEGGVEAFIRSRWAGSPIQEDPRIEFFDYDWRSNS 657
L Y+K+ V+Y L + WL + +K+ N E T +E AF +NAYNL TL V +E + P +KG +S ++ RFF + S G+ + +LY ENK++R D R+HFA+NCAS+SCP L KLF L+ L+++T IN V L ED LS+N IFKWYK+DF + GG+ FI W GS I + RIE+ YDW NS
Sbjct: 11 LLSYLKDGK-VNYSLL--KNDLWLKKNLEKMKNTNVKELTYSEEFAFWLNAYNLLTLQAVCKELEKNPNWKGNLSYFSRIRFFALRRHSIGSKKISLYTLENKILRKKFKDPRIHFAINCASISCPFLPGKLFEADSLETYLEDLTYQFINDQNSVILNED--TLSLNQIFKWYKKDFKEGGGLITFINKYWKGSKIPNNIRIEYLKYDWHINS 219
BLAST of mRNA_Ecto-sp9_F_contig10118.157.1 vs.
Match: DUF547 (domain-containing protein n=1 Tax=Candidatus Heimdallarchaeota archaeon LC_3 TaxID=1841598 RepID=A0A1Q9NDR2_9ARCH) HSP 1 Score: 148 bits (373), Expect = 7.630e-41 Identity = 70/171 (40.94%), Postives = 108/171 (63.16%), Query Frame = 1
Query: 136 TDAERHAFLINAYNLWTLHYVIRE-RRFPGFKGAVSMLAKARFFYWHKVSTGAGRWNLYNFENKVIRPDLNDARVHFALNCASMSCPPLRRKLFTGPGLDAELDEVTSAAINGGAMVQLKEDGKALSVNPIFKWYKEDFDKEGGVEAFIRSRWAGSPIQEDPRIEFFDYDW 645
+D E+ AF INAYN+ T+ V ++ ++ P +KG S + K +FFY K + NLYN ENK++R N+ R+HFA+NCAS+SCPPL K+ + + ++LD +TS IN G V+ + L VN IFKWY++DF +GG+ FI++ + + I E +++F Y+W
Sbjct: 40 SDNEKLAFYINAYNILTVWAVRKKLKKNPSWKGNTSYIRKIKFFYLSKYVVAGKKINLYNLENKILRKKFNEPRIHFAINCASISCPPLPNKIISAENIHSQLDLLTSNFINDGVNVKYNKKQNILEVNSIFKWYEKDFKGQGGILLFIKNHLSKNIINERTKLKFLPYNW 210
BLAST of mRNA_Ecto-sp9_F_contig10118.157.1 vs.
Match: DUF547 (domain-containing protein n=1 Tax=Candidatus Heimdallarchaeota archaeon TaxID=2026747 RepID=A0A842RJ64_9ARCH) HSP 1 Score: 148 bits (374), Expect = 8.490e-41 Identity = 81/215 (37.67%), Postives = 120/215 (55.81%), Query Frame = 1
Query: 22 LSEYVKESNLVDYRRLAAQEKEWLAPVISSIKSNNPTE-TDAERHAFLINAYNLWTLHYVIRE-RRFPGFKGAVSMLAKARFFYWHKVSTGAGRWNLYNFENKVIRPDLNDARVHFALNCASMSCPPLRRKLFTGPGLDAELDEVTSAAINGGAMVQLKEDGKALSVNPIFKWYKEDFDKEGGVEAFIRSRWAGSPIQEDP-RIEFFDYDWRSNS 657
LS ++ ++ VDY+ L +E +W I I++ + T+ T+ ER AF +NAYN T+ V+ + + P + G S + + FFY+ + + +LY ENK++R D R+HF +NC S SCP L +F LD LD +TS IN V L E L +N IFKWYK+DF KEGG+ FI+ W G + D +I++ YDW N+
Sbjct: 13 LSHWIDKNGRVDYQSL--KEDKWFWKQIDKIETMDLTDKTEKERFAFWLNAYNFLTIKGVLDKLEKKPNWNGNTSFIGRILFFYFKRFKVANRKMSLYRLENKILRKRFRDPRIHFVINCGSSSCPFLPGNMFEANSLDETLDGLTSFFINSQTNVYLDEKDAILYLNKIFKWYKKDFKKEGGIIEFIKKYWKGPKEKLDNVKIKYKKYDWSLNN 225
BLAST of mRNA_Ecto-sp9_F_contig10118.157.1 vs.
Match: DUF547 (domain-containing protein n=1 Tax=Candidatus Prometheoarchaeum syntrophicum TaxID=2594042 RepID=A0A5B9DFW7_9ARCH) HSP 1 Score: 136 bits (343), Expect = 3.790e-36 Identity = 79/218 (36.24%), Postives = 120/218 (55.05%), Query Frame = 1
Query: 19 RLSEYVKESNLVDYRRLAAQEKEWLAPVISSIKSNNPTE-TDAERHAFLINAYNLWTLHYVIRE-RRFPGFKGAVSMLAKARFFYWHKVSTGAGRWNLYNFENKVIRPDLNDARVHFALNCASMSCPPLRRKLFTGPGLDAELDEVTSAAINGGAMVQLKEDGKALSVNPIFKWYKEDFDK-EGGVEAFIRSRWAGSPIQ--EDPRIEFFDYDWRSNS 657
+L Y+ E++ VDY R+ + W I +S + + + + AF +NAYNL+T+ V+ ++ +KG ++ ++ +FF K +L E K+IR D RVHFA+NC S SCP L +LF G L+ L+ V+ +N V+ E K LS+NPIFKWYK DF K GG+ FI+ W G PI+ + +I++F Y+W NS
Sbjct: 15 QLGRYLDENHNVDYDRI--KNDTWFLDKIKEFESKDVSALSHDDEFAFWLNAYNLFTIKAVMDVLKKNKQWKGNLTTFSRMKFFVLRKYKIAGKSMSLSALETKIIRRKFKDPRVHFAINCGSSSCPVLYGRLFEGENLNELLENVSFNFVNNLTQVKFDETSKILSLNPIFKWYKNDFKKWAGGIVPFIKKYWKG-PIENLDHAKIKYFQYNWTLNS 229
BLAST of mRNA_Ecto-sp9_F_contig10118.157.1 vs.
Match: DUF547 (domain-containing protein n=1 Tax=Chthoniobacterales bacterium TaxID=2201154 RepID=A0A2W5YS27_9BACT) HSP 1 Score: 130 bits (327), Expect = 1.420e-33 Identity = 76/215 (35.35%), Postives = 110/215 (51.16%), Query Frame = 1
Query: 22 LSEYVKESNL--VDYRRLAAQEKEWLAPVISSIKSNNPTETDAERHAFLINAYNLWTLHYVIRERRFPGFKGAVSMLAKARFFYWHKVSTGAGRWNLYNFENKVIRPDLNDARVHFALNCASMSCPPLRRKLFTGPGLDAELDEVTSAAINGGAMVQLKEDGKALSVNPIFKWYKEDFDKEGGVEAFIRSRWAGSPIQEDPRIEFFDYDWRSNSA 660
L +YV + ++++ +A + A V S K + + + ER AF INAYN W LH + + K RFF + + + + + E VIR +D VHFALNCAS SCPPL + FTG +DA+++++ A IN V E K ++ IF WYK DF K+GG FI R +PI +D +I + DY+W N A
Sbjct: 39 LKQYVTPGGVKYAEWKKNSADMQAIGAVVDSISKESLSSRGEKERLAFYINAYNAWILHGALAKYPTKSVKDTFF-----RFFTANNIKVAGEQMSFNHLEKDVIRGKFSDPHVHFALNCASRSCPPLMPEAFTGDKVDAQMEKLAVAFINSEKGVTYNESAKTAQLSKIFDWYKNDFAKDGGALEFINKR-RSTPIPKDAKITYQDYNWSLNDA 247
BLAST of mRNA_Ecto-sp9_F_contig10118.157.1 vs.
Match: DUF547 (domain-containing protein n=1 Tax=Chthoniobacterales bacterium TaxID=2201154 RepID=A0A7W1U794_9BACT) HSP 1 Score: 130 bits (326), Expect = 1.910e-33 Identity = 67/172 (38.95%), Postives = 95/172 (55.23%), Query Frame = 1
Query: 145 ERHAFLINAYNLWTLHYVIRERRFPGFKGAVSMLAKARFFYWHKVSTGAGRWNLYNFENKVIRPDLNDARVHFALNCASMSCPPLRRKLFTGPGLDAELDEVTSAAINGGAMVQLKEDGKALSVNPIFKWYKEDFDKEGGVEAFIRSRWAGSPIQEDPRIEFFDYDWRSNSA 660
E+ AF +NAYN W LH + + K + RFF ++ + + E ++IRP + RVHFALNCAS SCPPL + F LDA+L+++ A +N V + K+++++ IFKWYK+DFD GGV AFI R P+ D +I + DYDW N A
Sbjct: 80 EQLAFYLNAYNAWILHEALGKYPTKSVKDVLF-----RFFLGQRIKVAGEPMSFNHLEKEIIRPKFGEPRVHFALNCASQSCPPLNPEAFRAEKLDAQLEKLAVAFVNSRKGVDYSLEKKSVALSAIFKWYKDDFDHAGGVLAFINKR-RHEPLPNDAQIGYQDYDWSLNVA 245
BLAST of mRNA_Ecto-sp9_F_contig10118.157.1 vs.
Match: DUF547 (domain-containing protein n=1 Tax=Asgard group archaeon TaxID=2591838 RepID=A0A8J7ZG25_9ARCH) HSP 1 Score: 129 bits (323), Expect = 3.360e-33 Identity = 79/217 (36.41%), Postives = 123/217 (56.68%), Query Frame = 1
Query: 22 LSEYVKESNLVDYRRLAAQEKEWLAPVISSIKSNNPTE-TDAERHAFLINAYNLWTLHYV--IRERRFPGFKGAVSMLAKARFFYWHKVSTGAGRWNLYNFENKVIRPDLNDARVHFALNCASMSCPPLRRKLFTGPGLDAELDEVTSAAINGGAMVQLKEDGKALSVNPIFKWYKEDFDKEGGVEAFIRSRWAGSPIQE--DPRIEFFDYDWRSNS 657
L+ Y+ LV+Y+++ +E++W I+ +++ + +D E AF +N YNL T+ V I E+ P +KG S+L K +FF K + L E+K+IR D R+HFA+NC S SCP L K+ L+ LD +TS IN G +Q + K L V+ IFKWY++DF + GG++ FI S + + I++ D +I+F YDW N+
Sbjct: 16 LANYIDSKGLVNYKKI--KEEKWFWEQINYLQNIQVEKLSDNELFAFWLNTYNLLTIKGVLDILEKN-PNWKGNTSLLGKLKFFILKKHKVADKKLTLNYIEHKIIRKQFRDPRIHFAINCGSTSCPFLPTKIIQPDKLEKTLDGLTSFFINSGN-IQFDHNKKILFVSKIFKWYRKDFKRVGGIKHFI-SIYLKAKIKDIQDYKIKFLKYDWSLNN 227
BLAST of mRNA_Ecto-sp9_F_contig10118.157.1 vs.
Match: DUF547 (domain-containing protein n=1 Tax=Chthoniobacterales bacterium TaxID=2201154 RepID=A0A7W1MWH3_9BACT) HSP 1 Score: 129 bits (323), Expect = 5.600e-33 Identity = 69/172 (40.12%), Postives = 94/172 (54.65%), Query Frame = 1
Query: 145 ERHAFLINAYNLWTLHYVIRERRFPGFKGAVSMLAKARFFYWHKVSTGAGRWNLYNFENKVIRPDLNDARVHFALNCASMSCPPLRRKLFTGPGLDAELDEVTSAAINGGAMVQLKEDGKALSVNPIFKWYKEDFDKEGGVEAFIRSRWAGSPIQEDPRIEFFDYDWRSNSA 660
E+ AF INAYN W LH + ++P K +L FF ++ + + + E +IRP D RVHFALNCAS SCPPL ++ F G LDA+LD++ +A +N V K +++ IF WYK+DF GG AFI R P+ D +I + DYDW N A
Sbjct: 82 EQLAFYINAYNAWILHEALG--KYPT-KSVKDLLFT--FFTGQRIKVASEPMSFNHLEKDIIRPQFGDPRVHFALNCASRSCPPLNQEAFRGDKLDAQLDKLATAFVNSPKGVDYSPQKKTAALSAIFNWYKDDFKAAGGPVAFIDQR-RSDPLPNDIKISYQDYDWSLNEA 247 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10118.157.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig10118.157.1 >prot_Ecto-sp9_F_contig10118.157.1 ID=prot_Ecto-sp9_F_contig10118.157.1|Name=mRNA_Ecto-sp9_F_contig10118.157.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=235bp AWPPADRLSEYVKESNLVDYRRLAAQEKEWLAPVISSIKSNNPTETDAERback to top mRNA from alignment at Ecto-sp9_F_contig10118:324..1929+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig10118.157.1 ID=mRNA_Ecto-sp9_F_contig10118.157.1|Name=mRNA_Ecto-sp9_F_contig10118.157.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=1606bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10118:324..1929+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10118:324..1929+ >mRNA_Ecto-sp9_F_contig10118.157.1 ID=mRNA_Ecto-sp9_F_contig10118.157.1|Name=mRNA_Ecto-sp9_F_contig10118.157.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1410bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10118:324..1929+ (Ectocarpus species9 EcSCA_722f female)back to top |