prot_Ecto-sp8_S_contig103.492.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig103.492.1
Unique Nameprot_Ecto-sp8_S_contig103.492.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length708
Homology
BLAST of mRNA_Ecto-sp8_S_contig103.492.1 vs. uniprot
Match: D7FKV7_ECTSI (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKV7_ECTSI)

HSP 1 Score: 1376 bits (3562), Expect = 0.000e+0
Identity = 694/707 (98.16%), Postives = 696/707 (98.44%), Query Frame = 0
Query:    1 MGDQYYVDEYDEEPDMDELKDYMSPDEGDGDLAGFERPELNVDLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLLWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAADGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGLSRVAEMELRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 707
            MGDQYYVDEYDEEPDMDELKDYMSPDEGDGDLAGFERPELNVDLSTAVVVSNLPQVVEAKHEKLGGVVRKVFS+MGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFL+WSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAADGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXX    KIQMKLEFRQQ      VAEM LRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ
Sbjct:    1 MGDQYYVDEYDEEPDMDELKDYMSPDEGDGDLAGFERPELNVDLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSKMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAADGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXXXXXKIQMKLEFRQQ------VAEMNLRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 701          
BLAST of mRNA_Ecto-sp8_S_contig103.492.1 vs. uniprot
Match: A0A835YNH6_9STRA (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNH6_9STRA)

HSP 1 Score: 838 bits (2166), Expect = 1.420e-297
Identity = 405/691 (58.61%), Postives = 514/691 (74.38%), Query Frame = 0
Query:   17 DELKDYMSPDEGDGD-LAGFERPELNVDLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLLWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAADGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDN--VLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLG-DVPKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGLSRVAEMELRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVK 703
            D L D+MS ++ D D L  F+RP+L +D STAVVV N+P+V   K  KL GVV K+F++ GTI ++G+  P D   G + GF F+NF   ++A+ A A +N +QLDK H   V+P+E+L +L S+P+EY  P P  ++PR D  SWLADE HRDQFV+RYS P   G   HE  V W E+   P+ CYGGEREK  GKAW EL++ WSPQGTYL + H+PGIALWGGE+FEKQGRF H +VKV+EFSPCE Y++TCNF+  ++A+IVWEV +G +LR FP        G  SLF+WS DG+++ARKG+D +SIY LPSM LLDKKSLKA G++DFEWSP  +   LAYWAPEQ N PARVSVVEIPSRK+LRQKNL  VSECRLHWQ+EG YLCVKVLRHSK+KKTMYNNFE+FRV +P VPVE +E +  V AFAWEP GDRFA+V G ++P++ +TFYTMKGGA  NEL E+ TL+D+P NH+YWSP G   ++AAMG++ G  NG L FYDVE+++ L+++EHFR +Y+EWDPSGRY CTAV+QP+ GSHWKAQMDNGY+L+SFQGE+F+E  KDNFYQ+ WRPRP SLL+S EKKKVV+NL+KYE+                AM+ K++ K  FR      + VA    RL  R  ELV+LR+GYDS DE+++ V++RT EV++SVK
Sbjct:   29 DPLADWMSEEDPDDDGLGDFQRPQLRMDFSTAVVVDNIPRVPAEKLVKLRGVVTKLFNQCGTIQENGICIPTD-AAGESLGFMFINFTTAEEARSAVAVINNYQLDKRHQFHVFPYERLDQLASVPDEYAPPPPMEYRPRPDLGSWLADENHRDQFVIRYSMPGVGGTPAHETIVNWCERFAPPTQCYGGEREKAQGKAWVELYVTWSPQGTYLASLHIPGIALWGGEQFEKQGRFAHSNVKVIEFSPCENYLLTCNFDTTERAMIVWEVRSGAVLRTFPARAFEG--GPPSLFKWSPDGRFIARKGRDCVSIYALPSMALLDKKSLKATGIADFEWSPSTSSCALAYWAPEQDNTPARVSVVEIPSRKDLRQKNLFNVSECRLHWQNEGTYLCVKVLRHSKTKKTMYNNFELFRVADPQVPVEMLELRSNVIAFAWEPTGDRFAIVHGTELPRVNITFYTMKGGASGNELAEVVTLEDKPVNHLYWSPQGQFIVMAAMGENTGGTNGYLNFYDVESKTILRESEHFRLSYLEWDPSGRYICTAVNQPIDGSHWKAQMDNGYRLWSFQGEQFYELTKDNFYQVLWRPRPVSLLSSEEKKKVVRNLKKYERRFERADKIASRRKARAAMAGKVRQKQAFR------AHVAARRERLLARHHELVELRDGYDSHDEANFFVETRTREVIMSVK 710          
BLAST of mRNA_Ecto-sp8_S_contig103.492.1 vs. uniprot
Match: A0A6H5KAX0_9PHAE (eIF2A domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAX0_9PHAE)

HSP 1 Score: 656 bits (1692), Expect = 4.940e-231
Identity = 341/405 (84.20%), Postives = 348/405 (85.93%), Query Frame = 0
Query:  303 DGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGLSRVAEMELRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 707
            DGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHW                                            QVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQ LETLQDRPFNHIYWSP+GNIC+LAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTG HWKAQMDNGYQLFSFQGERFHEFKKD+FYQIQWRPRPASLLTSAEKKKVVKNLRKY+K       XXXXXX   AM+DKIQMKLEFRQQASGLSRVA+M+LRLE RRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ
Sbjct:   14 DGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHW--------------------------------------------QVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQVLETLQDRPFNHIYWSPVGNICILAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGGHWKAQMDNGYQLFSFQGERFHEFKKDHFYQIQWRPRPASLLTSAEKKKVVKNLRKYDKRFEKDDRXXXXXXAREAMADKIQMKLEFRQQASGLSRVADMKLRLEARRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 374          
BLAST of mRNA_Ecto-sp8_S_contig103.492.1 vs. uniprot
Match: A0A8K1FRG0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FRG0_PYTOL)

HSP 1 Score: 628 bits (1620), Expect = 3.580e-215
Identity = 330/671 (49.18%), Postives = 434/671 (64.68%), Query Frame = 0
Query:   43 DLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLLWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAADGAA-----SLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDV-PKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGLSRVAEMELRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 707
            D S  VVV  LP V  AKH KL  VV+K+FS++GT+ D  +  PF    G T GFAFV F     A  A  T+N + LDK H + V  +  L + +  PEE+ +P+ + F    +  +WL D   RD FVLR+S          E E+ WS+K +  +L Y G REK  GK WC  ++LWSPQGTYL TFH  GIALWGG+ +EK GRF HK+VK+  FSP E Y++T +    + AII+W+V T +MLRAFP    T A G       + F+WSAD +++AR+GKD+IS+YELPSM+LLDKKSLKA+GV DF WSP D +LAYWAPE  N PARVS+VE+PSR+E+RQKNL  VS+C+L W   G +L VKV RHSKSKKT++ NFEIFRV E LVPVE+ E K  + AF++EP G RFA+V G+   +L V+FY M GGA KNEL  L TL D+P +H+YWSP GN  +LA +G+     NG LEF+D + + ++   EHF+C ++EWDPSGR   +AV QP+  S++K QMDNG+ L++FQG++  E KKD FYQ  WRPRP +LL+  E K VVKNL+KYEK                  ++K +   EF    +  +  A        RRQE + L NGYDS+D+  Y+V++R+ + VLS KE +Q
Sbjct:   46 DYSMCVVVGGLPVVDNAKHGKLLNVVKKIFSQVGTVVD--IDMPF-AANGNTNGFAFVEFEQDTHANDAVRTINNFALDKRHTLLVNKYTDLEKYQKTPEEFVAPKIEKFVEPKNLKTWLMDSARRDMFVLRHST---------ETEIFWSDKGEV-TLDYDGAREKTNGKQWCSQYVLWSPQGTYLATFHPQGIALWGGDNYEKVGRFAHKNVKIAVFSPQENYLVTLSETDTENAIIIWDVKTSKMLRAFPAGKPTGAKGEVVQGLMTPFKWSADDRFVARRGKDVISVYELPSMKLLDKKSLKADGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLQWHPNGTFLNVKVTRHSKSKKTLFTNFEIFRVHESLVPVESFEMKDTIVAFSFEPKGSRFAIVHGEGNQRLNVSFYDMNGGAKKNELTLLYTLTDKPCSHLYWSPHGNNIVLAGLGEI----NGVLEFWDTDEKQSITIQEHFKCTHVEWDPSGRVVSSAVCQPIDNSYYKFQMDNGFTLWTFQGKKLLEEKKDAFYQFLWRPRPRTLLSDKEYKDVVKNLKKYEKRFNEMDRMKERERIAAEKAEKQRQHQEFVDLVAARAETAR------ARRQEYIALLNGYDSEDDDEYIVETRSYDDVLSEKEEVQ 693          
BLAST of mRNA_Ecto-sp8_S_contig103.492.1 vs. uniprot
Match: M4BHP4_HYAAE (Eukaryotic translation initiation factor 3 subunit B n=15 Tax=Peronosporaceae TaxID=4777 RepID=M4BHP4_HYAAE)

HSP 1 Score: 624 bits (1609), Expect = 4.310e-213
Identity = 329/695 (47.34%), Postives = 445/695 (64.03%), Query Frame = 0
Query:   21 DYMSPDEGDGDLA--GFERPELNVDLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLLWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAADGAA-----SLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDVPK-LEVTFYTMKGGAG-KNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGLSRVAEMELRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 706
            DY+S +E + ++     E  +   D S AVVV  LP V ++KH KL  VV+K+F ++G++ D  +  PF    G T GFAFV +     A  A  T+N + LDK H + V  +E + R    P+E+ +P+   F    +  SWL D   RD FVLR+           E E+ WS+K +   L Y G+REK  GK WC  ++LWSPQGTYL TFH  GIALWGG+++EK GRF HK VK+  FSP E Y++T +  + + AII+W+V T ++LRAFP    T A G       + F+WSAD KY+AR+G D+IS+YELPSM+LL+KKSL+AEGV DF WSP D +LAYWAPE  N PARVS+VE+PSR E+RQKNL  VS+C+LHW  +G +LCVKV RHSKSKKTMY NFE+FRV+E LVPVE +E K  + AFAWEP G RFA V G+  + L V+FY M GG+    E+  L TL+D+  +H+YWSP+GN  +LA +G+     NG+LEF+D   Q ++   EHF+C+++EWDPSGR   TAV QP+  S++K  MDNGY L++FQG++  E KKD F+Q  WRPRP +LL+ A+ K VVKNL+K+EK                  +++ + + EF++       + +  +   GRR E + L  GYDSDDE+ Y+V   T + VL VKE +
Sbjct:   22 DYLSDEEVEDEVMTKAHEEADFCNDFSMAVVVGGLPVVDDSKHGKLLNVVKKIFGQVGSVVD--IDMPFGDD-GNTTGFAFVEYEQEAHANDAVRTINSFALDKRHTMNVNKYEDVERYLKTPDEFVAPKVDKFVEPKNLKSWLTDPSRRDMFVLRHGT---------ETEIFWSDKGEV-ELDYAGDREKTNGKQWCMQYVLWSPQGTYLATFHPQGIALWGGDKYEKVGRFAHKKVKLAMFSPNENYLITVSETEQESAIIIWDVKTSKLLRAFPAGKPTGAKGEVVQGLMTPFKWSADDKYVARRGTDVISVYELPSMKLLEKKSLRAEGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRHEVRQKNLFNVSDCKLHWHPDGTFLCVKVTRHSKSKKTMYTNFELFRVQEQLVPVEMLEVKDNIVAFAWEPKGTRFAAVHGEGQQHLNVSFYDMDGGSNVAKEVTLLYTLKDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDTTEQQSITVQEHFKCSHVEWDPSGRVVATAVCQPLDNSYYKLTMDNGYNLWTFQGKKLLEEKKDTFFQFLWRPRPRTLLSDAQYKNVVKNLKKFEKRFDQMDRFKERERLAAENAERNKKEQEFQEL------LQKRLITAAGRRAEYLSLLGGYDSDDENEYIVQKHTYDDVLEVKEEV 693          
BLAST of mRNA_Ecto-sp8_S_contig103.492.1 vs. uniprot
Match: G5A2B4_PHYSP (Eukaryotic translation initiation factor 3 subunit B n=7 Tax=Phytophthora TaxID=4783 RepID=G5A2B4_PHYSP)

HSP 1 Score: 622 bits (1603), Expect = 1.360e-212
Identity = 334/698 (47.85%), Postives = 442/698 (63.32%), Query Frame = 0
Query:   21 DYMSPDEGDGDLAGFERPELNV--DLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLLWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAADGAA-----SLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGD-VPKLEVTFYTMKGGAGK-NELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGLSRVAEMELRLEG---RRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 706
            DY+S +E + ++      E +   D S +VVV  LP V E KH KL  VV+K+F ++G + D  +  PF    G T GFAFV +     A  A  T+N + LDK H + V  +E + R +  P E+ +P+   F    +  +WLAD   RD FVLR+           E E+ WS+K +   L Y G+REK   K WC  ++LWSPQGTYL TFH  GIALWGG+++EK GRF HK+VK+  FSP E Y++T +  + D AII+W+V T +MLRAFP    T A G       + F+WSAD KY+AR+GKD+ISIYELPSM+LL+KKSL+AEGV DF WSP D +LAYWAPE  N PARVS+VE+PSR+E+RQKNL  VS+C+LHW   G +LCVKV RHSKSKKTMY NFE+FRV E LVPVE +E K+ + AFAWEP G RFA   G+   +L V+FY M GG+    E+  L TL+D+  +H+YWSP+GN  +LA +G+     NG+LEF+D   Q ++   EHF+C ++EWDPSGR   TAV QP+  S++K  MDNGY L++FQG++  E KKD FYQ  WRPRP +LL+  E   VVKNL+K+EK                  +++ + + EF++          +E RL     RR E V L +GYDS+DES Y+V S T + VL  KE +
Sbjct:   22 DYLSDEEVEDEVTSKAHEEADFCNDYSMSVVVGGLPFVDETKHGKLLNVVKKIFGQVGPVVD--IRMPFGGG-GKTTGFAFVEYEQEAHANDAVRTINNFALDKRHTMLVNKYEDIERFQKTPAEFAAPKVDKFVEPKNLKTWLADPARRDMFVLRHGS---------ETELFWSDKGEI-ELDYAGDREKLNDKQWCSQYVLWSPQGTYLATFHPQGIALWGGDKYEKVGRFAHKNVKLAVFSPNENYILTLSETEQDSAIIIWDVKTSKMLRAFPAGKPTGAKGEVVQGLMTPFKWSADDKYVARRGKDVISIYELPSMKLLEKKSLRAEGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCVKVTRHSKSKKTMYTNFELFRVHEQLVPVEMLEVKESIVAFAWEPKGTRFATAHGEGQQRLNVSFYDMDGGSKSVKEVTLLYTLKDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDATEQQSITVQEHFKCTHVEWDPSGRVVATAVCQPLDNSYYKFTMDNGYTLWTFQGKQLLEEKKDAFYQFLWRPRPRTLLSDEEYNNVVKNLKKFEKRFDQMDRLKERERLAAEKAERNRQEQEFQEL---------LEKRLASAAARRAEYVALLDGYDSEDESEYIVQSHTYDDVLETKEEV 693          
BLAST of mRNA_Ecto-sp8_S_contig103.492.1 vs. uniprot
Match: A0A0P1APB3_PLAHL (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1APB3_PLAHL)

HSP 1 Score: 621 bits (1601), Expect = 2.740e-212
Identity = 327/694 (47.12%), Postives = 442/694 (63.69%), Query Frame = 0
Query:   22 YMSPDEGDGDLA--GFERPELNVDLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLLWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAADGAA-----SLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGD-VPKLEVTFYTMKGGA-GKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGLSRVAEMELRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 706
            Y+S +E + ++     E  +   D S A+VV  LP V E+KH KL  VV+K+F ++G + D  +  PFD ++G T GFAF+ +     A  A  T+N + LDK H + V  +E + R    PEE+  P    F    +  +WL D   RD FVLR+           E E+ WS+K +   L Y G+REK+ GK WC  ++LWSPQG+YL TFH  GIALWGGE++EK GRF HK+VK+  FSP E Y++T +  + + AII+W+V T +MLRAFP   +T   G       + F+WSAD K++AR+GKD+IS+YELPSM+LLDKKSL+AEGV DF WSP D +LAYWAPE  N PARVS+VE+PSR+E+RQKNL  VS+C+LHW   G +LCVKV RHSKSKKTM+ NFE+FRV E LVPVE +E K  + AFAWEP G RFA V G+   +L V+FY M GG+    E+  L TL D+  +H+YWSP+GN  +LA +G+     NG+LEF+DV  Q ++   EHF+C ++EWDPSGR   TAV QP+  S++K  MDNGY L++FQG++  E KK+ FYQ  WRPRP +LL+ +E   VVKNL+ +EK                  +++ + + EF++       +A        RR E + L +GYDS DES Y+V S T + VL +KE +
Sbjct:   23 YLSDEELEDEMTTKAHEEADFANDYSMAIVVGGLPVVDESKHGKLLNVVKKIFGQVGNVVD--IQVPFD-SSGKTTGFAFIEYEQEAHANDAVRTINNFALDKRHTMIVNKYEDMERYVKTPEEFIPPTINSFVEPKNLKTWLMDPARRDMFVLRHGS---------ETEIFWSDKGEL-ELDYAGDREKKNGKQWCSQYVLWSPQGSYLATFHPQGIALWGGEKYEKVGRFAHKNVKLAVFSPHEKYLITLSETEQEAAIIIWDVQTSKMLRAFPAGKSTGVKGEVVQGLMTPFKWSADDKFVARRGKDVISVYELPSMKLLDKKSLRAEGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCVKVTRHSKSKKTMFTNFELFRVHEQLVPVEMLEMKDNIVAFAWEPKGTRFATVHGEGQQRLNVSFYDMDGGSKSSKEVTLLYTLTDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDVSEQQSITIQEHFKCTHVEWDPSGRVVATAVCQPLDNSYYKFTMDNGYTLWTFQGKQLLEEKKETFYQFLWRPRPRTLLSESEYNHVVKNLKTFEKRFDQMDRLKERERLAALNAERKREEQEFQELLDRRLAIAA------ARRAEYIALLDGYDSQDESEYIVQSHTYDDVLEIKEEV 693          
BLAST of mRNA_Ecto-sp8_S_contig103.492.1 vs. uniprot
Match: A0A2D4C7L6_PYTIN (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C7L6_PYTIN)

HSP 1 Score: 620 bits (1599), Expect = 5.300e-212
Identity = 326/694 (46.97%), Postives = 440/694 (63.40%), Query Frame = 0
Query:   21 DYMSPDEGDGDLAGFERPELNV--DLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLLWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTA-----ADGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDV-PKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGLSRVAEMELRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 706
            DY+S +E + ++A  +  E +   D S  VVV  LP +  +KH KL  VV+K+FS++G + D  +  PF    G+T GFAFV F     A  A  T+N + LDK H + V  +E L +  + P E+ +P+   F    +  +WL D   RD F LR+           E E+ WS+K +  SL Y G+REK+ GK WC  ++LWSP GTYLTTFH  G+ALW GE +EK GRF H++VK+  FSP E Y++T +  + D AI+VWEV TG++LR+FP+   T        G  + F+WSAD +++AR+GKD+IS+YELPSM+LLDKKSLKA+G+ DF WSP D VLAYWAPE  N PARVS+VE+PSR+ELRQKNL  VS+C+L W   G +L VKV RHSKSKKT++ NFE+FR+RE LVPVE +E K+ + AF++EP G RFA+V G+   +L V+FY M GG  KNEL  L TL D+P +H+YWSP GN  +LA MG+     NG LEF+D + + ++   EHF+C ++EWDPSGR   +AV QP+  S++K QMDNG+ L+SFQG++  E KKD FYQ  WRPRP +LL+  E   VVKNL+KYE+                  ++K +   EF +        A         R E + L  GYDS+DE  Y+V SRT + V+S  E +
Sbjct:   22 DYLSDEEVEDEVATQKHEEEDFCNDFSMCVVVGGLPVIDNSKHAKLLNVVKKIFSQVGAVVD--IDMPFG-ANGMTTGFAFVEFEQEAHAADAVRTINNFALDKRHTLLVNKYEDLHKFEATPSEFVAPKIDKFVEPKNLKTWLTDSARRDMFALRHGT---------ETEIFWSDKGEI-SLDYAGDREKQNGKQWCSQYVLWSPHGTYLTTFHPQGVALWAGEHYEKVGRFAHRNVKIAVFSPNENYLITLSETEVDNAIVVWEVKTGKLLRSFPLGKPTGEKGEVVQGIMTPFKWSADDRFVARRGKDVISVYELPSMKLLDKKSLKADGIHDFFWSPTDPVLAYWAPEGNNVPARVSLVELPSRRELRQKNLFNVSDCKLQWHPNGTFLRVKVTRHSKSKKTLFTNFELFRLRESLVPVEMLEMKETIVAFSFEPKGSRFAVVHGEGNQRLNVSFYDMHGGNKKNELTLLYTLTDKPCSHLYWSPHGNNIVLAGMGE----MNGVLEFWDTDEKQSITIQEHFKCTHVEWDPSGRVVMSAVCQPIDNSYYKFQMDNGFTLWSFQGKKLLEEKKDAFYQFLWRPRPRNLLSDKEYADVVKNLKKYERRFNEMDRLKERERVAAEKAEKQRQIAEFTELVQARKSAAR------ALRAEYIALLGGYDSEDEDEYIVQSRTFDDVISESEEV 692          
BLAST of mRNA_Ecto-sp8_S_contig103.492.1 vs. uniprot
Match: A0A3M6VP81_9STRA (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VP81_9STRA)

HSP 1 Score: 619 bits (1595), Expect = 2.200e-211
Identity = 331/695 (47.63%), Postives = 441/695 (63.45%), Query Frame = 0
Query:   21 DYMSPDEGDGDLA--GFERPELNVDLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLLWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAA-----DGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGD-VPKLEVTFYTMKG-GAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGLSRVAEMELRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 706
            DY+S +E + ++     E  +   D S AVVV  LP V E+KH KL  VV+K+F ++G + D  +  PFD + G T GFAFV +     AK A  T+N + LDK H + V  +E + R      E+ +P+ + F    +  +WL D   RD FVLR+           E E+ WS+K +     Y G+REK  GK WC  ++LWSPQGTYL TFH  GIALWGG+++EK GRF HK+V    FSP E Y++T +  + D AII+W+V T +MLRAFP    T A      G  + F+WSA  KY+AR+G D+ISIYELPSM+LL+KKSL+AEGV DF WSP D +LAYWAPE  N PARVS+VE+PSR+E+RQKNL  VS+C+LHW   G +LCVKV RHSKSKKTM+ NFE+FR++E LVPVE +E K  + AFAWEP G RFA V G+   +L V+FY M G      E+  L TL+D+  +H+YWSP+GN  +LA +G+     NG+LEF+D   Q ++   EHF+C ++EWDPSGR   TAV QP+  S++K  MDNGY L++FQG++  E KK++FYQ  WRPRP +LL+ AE KKVVKNL+KYEK                  +++ +   EF++    L   A +      RR E + L +GYDS+DE+ Y+V S T + VL  KE I
Sbjct:   22 DYLSDEEAEDEVTIKANEEEDFCNDFSMAVVVGGLPVVDESKHGKLLNVVKKIFGQVGAVVD--IHMPFDGS-GKTTGFAFVEYEQEAHAKDAVRTINNFALDKRHTMIVNKYEDIERYEKTTTEFVAPKVEKFVEPKNLQTWLMDPARRDMFVLRHGS---------ETEIFWSDKGEI-EFVYAGDREKTNGKQWCSQYVLWSPQGTYLATFHPQGIALWGGDKYEKVGRFAHKNVTRAVFSPHENYLITVSETEQDSAIIIWDVKTSKMLRAFPAGKPTGAKNEVVQGLMTPFKWSAGDKYVARRGNDVISIYELPSMKLLEKKSLRAEGVHDFFWSPTDLILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCVKVTRHSKSKKTMFTNFELFRLQEQLVPVEMLEIKDNIVAFAWEPKGTRFATVHGEGQQRLSVSFYDMDGENKSTKEVTLLYTLKDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDATEQQSITVQEHFKCTHVEWDPSGRVVATAVCQPLDNSYYKFTMDNGYTLWTFQGKQLLEEKKESFYQFLWRPRPRTLLSDAEYKKVVKNLKKYEKRFDQMDRLKERERQAAKNAERNRKVQEFQELLQRLLAAAAV------RRGEYIALLDGYDSEDENEYIVQSHTYDDVLESKEEI 693          
BLAST of mRNA_Ecto-sp8_S_contig103.492.1 vs. uniprot
Match: A0A5D6XPM0_9STRA (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPM0_9STRA)

HSP 1 Score: 617 bits (1591), Expect = 1.040e-210
Identity = 328/700 (46.86%), Postives = 441/700 (63.00%), Query Frame = 0
Query:   21 DYMSPDEGDGDLAGFERPELNV---DLSTAVVVSNLPQVVEAKHEKLGGVVRKVFSRMGTIADDGLTHPFDKTTGLTKGFAFVNFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPKPFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPSLCYGGEREKEAGKAWCELFLLWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAADGAA-----SLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDVP-KLEVTFYTMKGGAG-----KNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXAMSDKIQMKLEFRQQASGLSRVAEMELRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 706
            DYMS +E + D A  ++ + +    D S  VVV  LP V  AKH KL  V+ K+FS++G + D  L+ PF K+ G T GFA V +     A +A  T+NG+ LDK H + V  +  + + +S PE +  P+ + F    +  +WL D   RD FVLR+           E E+ WS+K +  SL Y G REK  GK WC  ++LWSP GTYL TFH PG+ALW GE++EK GRF HK+VK+  FSP ETY++T +    + AIIVW+V +G++LR FP    T   G       + F+WSAD +++AR+GKD++S+YELPSM+LL+KKSLKA+GV DF WSP D +LAYWAPE  N PARVS+VE+PSR E+RQKNL  VS+C+L+W   G +L VKV RHSKSKKT++ NFE+FRVREPLVPVE +E K  + AFAWEP G RFA V G+   +L V+FY M GGA        E+  L TL ++P +H+YWSP+GN  +LA +G+     NG LEF+D + + ++   EHF+C ++EWDPSGR   T+V QP+  S++K QMDNGY L+SFQG+   E KKD FYQ  WRPRP SLL+  E   VVKNL+KYEK                  ++K +++ EF+       R       ++  R   V L  GYDS+DE  Y+V++   +VVLS  E +
Sbjct:   23 DYMSDEEPE-DAAVTQQHDEDAFLRDFSMCVVVGGLPVVDSAKHAKLLAVLTKIFSQVGAVVD--LSMPFGKS-GSTTGFALVAYDQEAHANEAVRTINGFALDKRHTMLVNKYSDVEKFQSTPETFAEPKVEKFAEPKNYKNWLMDSARRDMFVLRHGT---------ETELFWSDKGEI-SLEYDGAREKVNGKQWCSQYVLWSPHGTYLATFHQPGLALWAGEKYEKVGRFAHKNVKIAVFSPNETYLLTVSETDAENAIIVWDVKSGKILRTFPAGKPTGVKGEVVQGLQTPFKWSADDRFVARRGKDVVSVYELPSMKLLEKKSLKADGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRTEIRQKNLFNVSDCKLNWHPNGTFLGVKVTRHSKSKKTLFTNFEMFRVREPLVPVEMLEMKDSIVAFAWEPKGTRFATVHGESQLRLNVSFYDMNGGAAGSKAASTEITLLYTLTEKPCSHLYWSPLGNNIVLAGLGE----MNGSLEFWDTDERQSITAQEHFKCTHVEWDPSGRVVATSVCQPLDNSYYKFQMDNGYNLWSFQGKLLKEEKKDAFYQFLWRPRPRSLLSDKEYANVVKNLKKYEKRFNEMDRLKERERLAAIQAEKNRLRQEFQDLVEARVRA------VQSARATYVSLLGGYDSEDEDEYIVETHVHDVVLSKAEEV 698          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig103.492.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKV7_ECTSI0.000e+098.16Eukaryotic translation initiation factor 3 subunit... [more]
A0A835YNH6_9STRA1.420e-29758.61Eukaryotic translation initiation factor 3 subunit... [more]
A0A6H5KAX0_9PHAE4.940e-23184.20eIF2A domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A8K1FRG0_PYTOL3.580e-21549.18Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
M4BHP4_HYAAE4.310e-21347.34Eukaryotic translation initiation factor 3 subunit... [more]
G5A2B4_PHYSP1.360e-21247.85Eukaryotic translation initiation factor 3 subunit... [more]
A0A0P1APB3_PLAHL2.740e-21247.12Eukaryotic translation initiation factor 3 subunit... [more]
A0A2D4C7L6_PYTIN5.300e-21246.97Eukaryotic translation initiation factor 3 subunit... [more]
A0A3M6VP81_9STRA2.200e-21147.63Eukaryotic translation initiation factor 3 subunit... [more]
A0A5D6XPM0_9STRA1.040e-21046.86Eukaryotic translation initiation factor 3 subunit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 47..129
e-value: 5.5E-4
score: 29.2
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 68..122
e-value: 2.3E-6
score: 27.3
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 46..133
score: 13.106
IPR013979Translation initiation factor, beta propellor-like domainPFAMPF08662eIF2Acoord: 387..595
e-value: 2.4E-44
score: 151.6
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 204..366
e-value: 7.9E-10
score: 40.1
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 407..619
e-value: 1.6E-5
score: 26.0
IPR011400Eukaryotic translation initiation factor 3 subunit BPIRSFPIRSF036424Transl_init_eIF3bcoord: 4..707
e-value: 1.8E-202
score: 672.0
IPR011400Eukaryotic translation initiation factor 3 subunit BPANTHERPTHR14068EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATEDcoord: 28..704
IPR011400Eukaryotic translation initiation factor 3 subunit BHAMAPMF_03001eIF3bcoord: 41..656
score: 76.744
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 45..129
e-value: 5.7E-18
score: 66.7
NoneNo IPR availablePANTHERPTHR14068:SF0EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Bcoord: 28..704
NoneNo IPR availableSUPERFAMILY82171DPP6 N-terminal domain-likecoord: 220..558
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 43..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig103contigEcto-sp8_S_contig103:15346..22963 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig103.492.1mRNA_Ecto-sp8_S_contig103.492.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig103 14274..22963 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig103.492.1 ID=prot_Ecto-sp8_S_contig103.492.1|Name=mRNA_Ecto-sp8_S_contig103.492.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=708bp
MGDQYYVDEYDEEPDMDELKDYMSPDEGDGDLAGFERPELNVDLSTAVVV
SNLPQVVEAKHEKLGGVVRKVFSRMGTIADDGLTHPFDKTTGLTKGFAFV
NFLNPQDAKQAAATLNGWQLDKSHLIKVYPFEQLARLRSLPEEYESPEPK
PFKPRVDPSSWLADEQHRDQFVLRYSEPHPSGKLVHEAEVMWSEKLQTPS
LCYGGEREKEAGKAWCELFLLWSPQGTYLTTFHVPGIALWGGERFEKQGR
FPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTT
AADGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDF
EWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQ
DEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAW
EPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWS
PMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSG
RYACTAVSQPVTGSHWKAQMDNGYQLFSFQGERFHEFKKDNFYQIQWRPR
PASLLTSAEKKKVVKNLRKYEKRFEKDDREKDRRKAREAMSDKIQMKLEF
RQQASGLSRVAEMELRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVL
SVKEVIQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR013979TIF_beta_prop-like
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR011400EIF3B
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf