prot_Ecto-sp8_S_contig10278.462.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10278.462.1
Unique Nameprot_Ecto-sp8_S_contig10278.462.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length238
Homology
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BLAST of mRNA_Ecto-sp8_S_contig10278.462.1 vs. uniprot
Match: D7G778_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G778_ECTSI)

HSP 1 Score: 454 bits (1168), Expect = 3.000e-160
Identity = 235/238 (98.74%), Postives = 236/238 (99.16%), Query Frame = 0 
Query:    1 MAGIMGGGWKGLRVLVLFHVLARASAGGTVSINIKDLGAIEGIQSLDIRGNYDGQLSKGVSGKASYVFNKDRVLPAGLSASSSTDTAYGKAFGTVTVDPQEKTAVVEGSIRNEELGMFSTTLKASEKEGGVLGPLKWTSNPVSFPFALQEATPMVIAIAHDINTKEGHLSIAAKLNSNFDGKLMLPSQGDPVATLVGSHSPDKASDIRASANVLHLVGSGFGKGAIGVTYRRDLDAVA 238
            MAGIMGGGWK LRVLVLFHVLARASAGGTVSINIKDLGAIEGIQSLDIRGNYDGQLSKGVSGKASYVFNKDRVLPAGLSASSSTDTAYGKAFGTVTVDPQ+KTAVVEGSIRNEELGMFSTTLKASEKEGGVLGPLKWTSNPVSFPFALQEATPMVIAIAHDINTKEGHLSIAAKLNSNFDGKLMLPSQGDPVATLVGSHSPDKASDIRASANVL LVGSGFGKGAIGVTYRRDLDAVA
Sbjct:    1 MAGIMGGGWKWLRVLVLFHVLARASAGGTVSINIKDLGAIEGIQSLDIRGNYDGQLSKGVSGKASYVFNKDRVLPAGLSASSSTDTAYGKAFGTVTVDPQDKTAVVEGSIRNEELGMFSTTLKASEKEGGVLGPLKWTSNPVSFPFALQEATPMVIAIAHDINTKEGHLSIAAKLNSNFDGKLMLPSQGDPVATLVGSHSPDKASDIRASANVLDLVGSGFGKGAIGVTYRRDLDAVA 238
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10278.462.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G778_ECTSI3.000e-16098.74Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..238
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 14..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.779

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10278contigEcto-sp8_S_contig10278:4393..6906 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10278.462.1mRNA_Ecto-sp8_S_contig10278.462.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10278 4393..6906 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10278.462.1 ID=prot_Ecto-sp8_S_contig10278.462.1|Name=mRNA_Ecto-sp8_S_contig10278.462.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=238bp
MAGIMGGGWKGLRVLVLFHVLARASAGGTVSINIKDLGAIEGIQSLDIRG
NYDGQLSKGVSGKASYVFNKDRVLPAGLSASSSTDTAYGKAFGTVTVDPQ
EKTAVVEGSIRNEELGMFSTTLKASEKEGGVLGPLKWTSNPVSFPFALQE
ATPMVIAIAHDINTKEGHLSIAAKLNSNFDGKLMLPSQGDPVATLVGSHS
PDKASDIRASANVLHLVGSGFGKGAIGVTYRRDLDAVA
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