prot_Ecto-sp8_S_contig102736.455.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig102736.455.1
Unique Nameprot_Ecto-sp8_S_contig102736.455.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length46
Homology
BLAST of mRNA_Ecto-sp8_S_contig102736.455.1 vs. uniprot
Match: A0A7S2BFW1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BFW1_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 1.320e-7
Identity = 21/33 (63.64%), Postives = 28/33 (84.85%), Query Frame = 0
Query:    4 EGLQPNVVCYGAAVDACAKGGQWERAVGLLQEM 36
             G++PNV+ + AA+DACAKGGQWE+A+ LL EM
Sbjct:    3 RGVKPNVISFNAAIDACAKGGQWEKALSLLDEM 35          
BLAST of mRNA_Ecto-sp8_S_contig102736.455.1 vs. uniprot
Match: A0A7S2FHK7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FHK7_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 3.720e-7
Identity = 21/33 (63.64%), Postives = 28/33 (84.85%), Query Frame = 0
Query:    4 EGLQPNVVCYGAAVDACAKGGQWERAVGLLQEM 36
             G++PNV+ + AA+DACAKGGQWE+A+ LL EM
Sbjct:    3 RGVKPNVISFNAAIDACAKGGQWEKALSLLDEM 35          
BLAST of mRNA_Ecto-sp8_S_contig102736.455.1 vs. uniprot
Match: A0A7S2AIS8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AIS8_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 1.050e-6
Identity = 20/34 (58.82%), Postives = 28/34 (82.35%), Query Frame = 0
Query:    3 GEGLQPNVVCYGAAVDACAKGGQWERAVGLLQEM 36
            G+G +P+V+ YGAA+ AC KGGQWE+A+ +L EM
Sbjct:  114 GDGFEPDVIYYGAAISACEKGGQWEKALVILDEM 147          
BLAST of mRNA_Ecto-sp8_S_contig102736.455.1 vs. uniprot
Match: A0A813D6S3_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813D6S3_POLGL)

HSP 1 Score: 50.1 bits (118), Expect = 8.560e-6
Identity = 23/44 (52.27%), Postives = 28/44 (63.64%), Query Frame = 0
Query:    1 MAGEGLQPNVVCYGAAVDACAKGGQWERAVGLLQEMGDAGVEPD 44
            M   G++ NV  Y  A+ ACAKGGQW+RA+ LL  M D  V PD
Sbjct:  143 MLARGVEANVFHYNVALSACAKGGQWQRALSLLSGMPDMAVIPD 186          
BLAST of mRNA_Ecto-sp8_S_contig102736.455.1 vs. uniprot
Match: A0A813DIV2_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813DIV2_POLGL)

HSP 1 Score: 50.1 bits (118), Expect = 8.570e-6
Identity = 23/44 (52.27%), Postives = 28/44 (63.64%), Query Frame = 0
Query:    1 MAGEGLQPNVVCYGAAVDACAKGGQWERAVGLLQEMGDAGVEPD 44
            M   G++ NV  Y  A+ ACAKGGQW+RA+ LL  M D  V PD
Sbjct:  888 MLARGVEANVFHYNVALSACAKGGQWQRALSLLSGMPDMAVIPD 931          
BLAST of mRNA_Ecto-sp8_S_contig102736.455.1 vs. uniprot
Match: A0A7S2BGS7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BGS7_9STRA)

HSP 1 Score: 48.5 bits (114), Expect = 1.070e-5
Identity = 22/36 (61.11%), Postives = 27/36 (75.00%), Query Frame = 0
Query:    8 PNVVCYGAAVDACAKGGQWERAVGLLQEMGDAGVEP 43
            PNV+ + AA+ AC KG QWE+AV LLQEM   GV+P
Sbjct:    1 PNVISFSAAISACQKGMQWEKAVELLQEMQLHGVKP 36          
BLAST of mRNA_Ecto-sp8_S_contig102736.455.1 vs. uniprot
Match: A0A812ZMR3_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812ZMR3_9DINO)

HSP 1 Score: 49.7 bits (117), Expect = 1.170e-5
Identity = 20/38 (52.63%), Postives = 27/38 (71.05%), Query Frame = 0
Query:    5 GLQPNVVCYGAAVDACAKGGQWERAVGLLQEMGDAGVE 42
            G+QPNVVC+GA + ACAKG  WE A  LL E+ +  ++
Sbjct:   14 GIQPNVVCFGAGITACAKGRHWEGAFALLDELRERALD 51          
BLAST of mRNA_Ecto-sp8_S_contig102736.455.1 vs. uniprot
Match: A0A813B4V0_9DINO (EMB2654 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813B4V0_9DINO)

HSP 1 Score: 48.9 bits (115), Expect = 1.430e-5
Identity = 21/43 (48.84%), Postives = 27/43 (62.79%), Query Frame = 0
Query:    3 GEGLQPNVVCYGAAVDACAKGGQWERAVGLLQEMGDAGVEPDR 45
            G+   P    + AA+ AC KGG+W+RA+ LL  M DA V PDR
Sbjct:   16 GKNCSPTATSFNAAITACGKGGEWQRALILLSSMHDAAVLPDR 58          
BLAST of mRNA_Ecto-sp8_S_contig102736.455.1 vs. uniprot
Match: R1BI14_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BI14_EMIHU)

HSP 1 Score: 48.9 bits (115), Expect = 1.440e-5
Identity = 21/38 (55.26%), Postives = 27/38 (71.05%), Query Frame = 0
Query:    1 MAGEGLQPNVVCYGAAVDACAKGGQWERAVGLLQEMGD 38
            M   G++P+V+ Y AA+ AC K GQWE+AV LL EM D
Sbjct:    1 MTAAGVRPDVISYNAAISACEKAGQWEKAVSLLCEMPD 38          
BLAST of mRNA_Ecto-sp8_S_contig102736.455.1 vs. uniprot
Match: D8LCM4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCM4_ECTSI)

HSP 1 Score: 49.3 bits (116), Expect = 1.600e-5
Identity = 20/40 (50.00%), Postives = 29/40 (72.50%), Query Frame = 0
Query:    5 GLQPNVVCYGAAVDACAKGGQWERAVGLLQEMGDAGVEPD 44
            G  P+VV Y A + AC++ G WERA+GLL +M + G+EP+
Sbjct:  561 GPTPDVVSYSATITACSRAGNWERALGLLDQMREDGLEPN 600          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig102736.455.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A7S2BFW1_9STRA1.320e-763.64Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2FHK7_9STRA3.720e-763.64Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2AIS8_9STRA1.050e-658.82Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A813D6S3_POLGL8.560e-652.27Hypothetical protein (Fragment) n=1 Tax=Polarella ... [more]
A0A813DIV2_POLGL8.570e-652.27Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
A0A7S2BGS7_9STRA1.070e-561.11Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A812ZMR3_9DINO1.170e-552.63Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP... [more]
A0A813B4V0_9DINO1.430e-548.84EMB2654 protein n=1 Tax=Symbiodinium sp. KB8 TaxID... [more]
R1BI14_EMIHU1.440e-555.26Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
D8LCM4_ECTSI1.600e-550.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 11..44
e-value: 3.3E-8
score: 31.2
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 8..44
e-value: 4.3E-7
score: 30.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 9..43
score: 11.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..45
e-value: 4.6E-12
score: 47.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig102736contigEcto-sp8_S_contig102736:8..145 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig102736.455.1mRNA_Ecto-sp8_S_contig102736.455.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig102736 2..145 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig102736.455.1 ID=prot_Ecto-sp8_S_contig102736.455.1|Name=mRNA_Ecto-sp8_S_contig102736.455.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=46bp
MAGEGLQPNVVCYGAAVDACAKGGQWERAVGLLQEMGDAGVEPDR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf