mRNA_Ecto-sp8_S_contig102736.455.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig102736.455.1 vs. uniprot
Match: A0A7S2BFW1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BFW1_9STRA) HSP 1 Score: 53.5 bits (127), Expect = 2.010e-7 Identity = 21/32 (65.62%), Postives = 28/32 (87.50%), Query Frame = 1
Query: 19 GLQPNVVCYGAAVDACAKGGQWERAVGLLQEM 114
G++PNV+ + AA+DACAKGGQWE+A+ LL EM
Sbjct: 4 GVKPNVISFNAAIDACAKGGQWEKALSLLDEM 35
BLAST of mRNA_Ecto-sp8_S_contig102736.455.1 vs. uniprot
Match: A0A7S2FHK7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FHK7_9STRA) HSP 1 Score: 53.5 bits (127), Expect = 5.560e-7 Identity = 21/32 (65.62%), Postives = 28/32 (87.50%), Query Frame = 1
Query: 19 GLQPNVVCYGAAVDACAKGGQWERAVGLLQEM 114
G++PNV+ + AA+DACAKGGQWE+A+ LL EM
Sbjct: 4 GVKPNVISFNAAIDACAKGGQWEKALSLLDEM 35
BLAST of mRNA_Ecto-sp8_S_contig102736.455.1 vs. uniprot
Match: A0A7S2AIS8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AIS8_9STRA) HSP 1 Score: 51.6 bits (122), Expect = 1.590e-6 Identity = 20/34 (58.82%), Postives = 28/34 (82.35%), Query Frame = 1
Query: 13 GEGLQPNVVCYGAAVDACAKGGQWERAVGLLQEM 114
G+G +P+V+ YGAA+ AC KGGQWE+A+ +L EM
Sbjct: 114 GDGFEPDVIYYGAAISACEKGGQWEKALVILDEM 147
BLAST of mRNA_Ecto-sp8_S_contig102736.455.1 vs. uniprot
Match: A0A7S2BGS7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BGS7_9STRA) HSP 1 Score: 48.5 bits (114), Expect = 1.170e-5 Identity = 22/36 (61.11%), Postives = 27/36 (75.00%), Query Frame = 1
Query: 28 PNVVCYGAAVDACAKGGQWERAVGLLQEMGDAGVEP 135
PNV+ + AA+ AC KG QWE+AV LLQEM GV+P
Sbjct: 1 PNVISFSAAISACQKGMQWEKAVELLQEMQLHGVKP 36
BLAST of mRNA_Ecto-sp8_S_contig102736.455.1 vs. uniprot
Match: A0A812ZMR3_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812ZMR3_9DINO) HSP 1 Score: 49.7 bits (117), Expect = 1.280e-5 Identity = 20/38 (52.63%), Postives = 27/38 (71.05%), Query Frame = 1
Query: 19 GLQPNVVCYGAAVDACAKGGQWERAVGLLQEMGDAGVE 132
G+QPNVVC+GA + ACAKG WE A LL E+ + ++
Sbjct: 14 GIQPNVVCFGAGITACAKGRHWEGAFALLDELRERALD 51
BLAST of mRNA_Ecto-sp8_S_contig102736.455.1 vs. uniprot
Match: A0A813D6S3_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813D6S3_POLGL) HSP 1 Score: 49.7 bits (117), Expect = 1.280e-5 Identity = 23/44 (52.27%), Postives = 28/44 (63.64%), Query Frame = 1
Query: 7 MAGEGLQPNVVCYGAAVDACAKGGQWERAVGLLQEMGDAGVEPD 138
M G++ NV Y A+ ACAKGGQW+RA+ LL M D V PD
Sbjct: 143 MLARGVEANVFHYNVALSACAKGGQWQRALSLLSGMPDMAVIPD 186
BLAST of mRNA_Ecto-sp8_S_contig102736.455.1 vs. uniprot
Match: A0A813DIV2_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813DIV2_POLGL) HSP 1 Score: 49.7 bits (117), Expect = 1.280e-5 Identity = 23/44 (52.27%), Postives = 28/44 (63.64%), Query Frame = 1
Query: 7 MAGEGLQPNVVCYGAAVDACAKGGQWERAVGLLQEMGDAGVEPD 138
M G++ NV Y A+ ACAKGGQW+RA+ LL M D V PD
Sbjct: 888 MLARGVEANVFHYNVALSACAKGGQWQRALSLLSGMPDMAVIPD 931
BLAST of mRNA_Ecto-sp8_S_contig102736.455.1 vs. uniprot
Match: D8LCM4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCM4_ECTSI) HSP 1 Score: 49.3 bits (116), Expect = 1.750e-5 Identity = 20/40 (50.00%), Postives = 29/40 (72.50%), Query Frame = 1
Query: 19 GLQPNVVCYGAAVDACAKGGQWERAVGLLQEMGDAGVEPD 138
G P+VV Y A + AC++ G WERA+GLL +M + G+EP+
Sbjct: 561 GPTPDVVSYSATITACSRAGNWERALGLLDQMREDGLEPN 600
BLAST of mRNA_Ecto-sp8_S_contig102736.455.1 vs. uniprot
Match: A0A813B4V0_9DINO (EMB2654 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813B4V0_9DINO) HSP 1 Score: 48.5 bits (114), Expect = 2.160e-5 Identity = 21/43 (48.84%), Postives = 27/43 (62.79%), Query Frame = 1
Query: 13 GEGLQPNVVCYGAAVDACAKGGQWERAVGLLQEMGDAGVEPDR 141
G+ P + AA+ AC KGG+W+RA+ LL M DA V PDR
Sbjct: 16 GKNCSPTATSFNAAITACGKGGEWQRALILLSSMHDAAVLPDR 58
BLAST of mRNA_Ecto-sp8_S_contig102736.455.1 vs. uniprot
Match: R1BI14_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BI14_EMIHU) HSP 1 Score: 48.5 bits (114), Expect = 2.180e-5 Identity = 21/38 (55.26%), Postives = 27/38 (71.05%), Query Frame = 1
Query: 7 MAGEGLQPNVVCYGAAVDACAKGGQWERAVGLLQEMGD 120
M G++P+V+ Y AA+ AC K GQWE+AV LL EM D
Sbjct: 1 MTAAGVRPDVISYNAAISACEKAGQWEKAVSLLCEMPD 38 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig102736.455.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig102736.455.1 >prot_Ecto-sp8_S_contig102736.455.1 ID=prot_Ecto-sp8_S_contig102736.455.1|Name=mRNA_Ecto-sp8_S_contig102736.455.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=46bp MAGEGLQPNVVCYGAAVDACAKGGQWERAVGLLQEMGDAGVEPDR*back to top mRNA from alignment at Ecto-sp8_S_contig102736:2..145+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig102736.455.1 ID=mRNA_Ecto-sp8_S_contig102736.455.1|Name=mRNA_Ecto-sp8_S_contig102736.455.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=144bp|location=Sequence derived from alignment at Ecto-sp8_S_contig102736:2..145+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig102736:2..145+ >mRNA_Ecto-sp8_S_contig102736.455.1 ID=mRNA_Ecto-sp8_S_contig102736.455.1|Name=mRNA_Ecto-sp8_S_contig102736.455.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=138bp|location=Sequence derived from alignment at Ecto-sp8_S_contig102736:2..145+ (Ectocarpus species8 EcLAC_412)back to top |